Citrus Sinensis ID: 044670

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300--
Protein Sequence
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSKMQDKC
Secondary Structure (PSIPRED)
ccccEEEEcccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEccccccccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccEcHHHHcccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccEEEEEEcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEccEccHHHHcHcccHHHHHHHHHHccccHHccccHHHHHHHHHHHHcHHHcHcccEEEEEcccHHHcccccHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccEEccHccccc
Coil and Loop (DISEMBL)
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACklgedvcyihcdvtsedeiTNLVDTAVAKYgkldimynnagivdrgfasvldtpksdlDRVLAVNttggflgakHAARVMIPQHKGCILFTASACTeiagigspaytvsKYGIIALVKILAAELRQYGLRvncvspyglvsgissrnsinPAILEAFLSEMGNLRGQVLNAEGIANAALYLAtdeasdvtglnlvvdggfsvanpslmkfaspfHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVsskmqdkc
Flexible Loop (DISEMBL)
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDvtsedeitnLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVipvvsskmqdkc
Low Complexity Region (SEG)
LEGKVaiitggasgigaaaaKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSKMQDKC
Disordered region (IsUnstruct)
****VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVV********
Disordered Region (DISOPRED)
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR*************EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSKM****
Disordered Region (DISEMBL)
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSKMQDKC
Disordered Region (DISPRO)
*EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSK*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGISFIAMMCLIHKIQKVIPVVSSKMQDKC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	302	2.2.26 [Sep-21-2011]
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.844	0.955	0.481	2e-61
Q94K41	257	Short-chain dehydrogenase	yes	no	0.824	0.968	0.478	8e-59
O80713	257	Short-chain dehydrogenase	no	no	0.824	0.968	0.468	2e-56
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.814	0.825	0.484	3e-56
Q7FAE1	274	Momilactone A synthase OS	no	no	0.844	0.930	0.484	1e-54
O80714	258	Short-chain dehydrogenase	no	no	0.824	0.965	0.446	3e-54
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.821	0.818	0.462	2e-53
F4J300	259	Short-chain dehydrogenase	no	no	0.814	0.949	0.453	9e-53
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.844	0.894	0.411	6e-48
P50160	336	Sex determination protein	N/A	no	0.817	0.735	0.405	2e-46

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  236 bits (602), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/264 (48%), Positives = 170/264 (64%), Gaps = 9/264 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDV 58
           LEGKVA++TGGASGIG + A+LF E+GAK+ I DVQD LGQ ++ +LG D   CY HCDV
Sbjct: 3   LEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCDV 62

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T ED++   VD    KYG +DIM NNAGI       + D   ++  +V  +N  G FLG 
Sbjct: 63  TVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLGM 122

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           KHAAR+MIP+ KG I+  AS  + IAG G   YT +K+ ++ L K +AAEL ++G+RVNC
Sbjct: 123 KHAARIMIPKMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVNC 182

Query: 179 VSPYGLVSGIS----SRNSINPAILEAFLS---EMGNLRGQVLNAEGIANAALYLATDEA 231
           VSPY + + +S      + +    L  FL+      NL+G  L    +A A LYLAT+E+
Sbjct: 183 VSPYAVPTRLSMPYLPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLYLATEES 242

Query: 232 SDVTGLNLVVDGGFSVANPSLMKF 255
             V+GLNLV+DGGFS+AN +L  F
Sbjct: 243 KYVSGLNLVIDGGFSIANHTLQVF 266

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.
Zingiber zerumbet (taxid: 311405)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 2EC: 6

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  227 bits (578), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 121/253 (47%), Positives = 170/253 (67%), Gaps = 4/253 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           L+GK+ IITGGASGIGA + +LF E+GA+VVI DVQD LGQ +A  +GED   Y HCDVT
Sbjct: 6   LDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVT 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +E E+ N V   V KYGKLD++++NAG+++  F S+LD   ++LDR +A+N  G     K
Sbjct: 66  NETEVENAVKFTVEKYGKLDVLFSNAGVIEP-FVSILDLNLNELDRTIAINLRGTAAFIK 124

Query: 120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           HAAR M+ +  +G I+ T S   EIAG     YT SK+G++ L+K  +  L +YG+RVN 
Sbjct: 125 HAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNG 184

Query: 179 VSPYGLVSGISSRN-SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           V+P+G+ + +      + P ++E   S   NL+G VL A  +A AAL+LA+DE++ V+G 
Sbjct: 185 VAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQ 244

Query: 238 NLVVDGGFSVANP 250
           NL VDGG+SV  P
Sbjct: 245 NLAVDGGYSVVKP 257

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  219 bits (558), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 118/252 (46%), Positives = 167/252 (66%), Gaps = 3/252 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           L+GK+AIITGGASGIGA A +LF ++GAKVVI D Q+ LGQ +A  +G+D   +  CDVT
Sbjct: 6   LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVT 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +E E+ N V   V KYGKLD++++NAG++++   S LD      DR +AVN  G     K
Sbjct: 66  NEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAFIK 124

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           HAAR M+ +  +G I+ T S  +EI G G  AYT SK+ ++ LVK     L +YG+RVN 
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNG 184

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+PY + + I+SR+     ++E + +  G L+G VL A  +A AAL+LA+D+++ V+G N
Sbjct: 185 VAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQN 244

Query: 239 LVVDGGFSVANP 250
           L VDGG+SV  P
Sbjct: 245 LAVDGGYSVVKP 256

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  218 bits (556), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/250 (48%), Positives = 167/250 (66%), Gaps = 4/250 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           L+GK+AIITGGASGIGA A +LF ++GAKVVI D+Q+ LGQ LA  +G D   +  C+VT
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E ++ N V   V K+GKLD++++NAG+++  F SVLD      DR +AVN  G     K
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE-AFGSVLDLDLEAFDRTMAVNVRGAAAFIK 162

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           HAAR M+    +G I+ T S   EI G G  +YT SK+ ++ L++   A L QYG+RVN 
Sbjct: 163 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 222

Query: 179 VSPYGLVSGISS-RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           V+PYG+ +G++S  N     +LE +   +GNL+G VL A  IA AAL+LA+D++  ++G 
Sbjct: 223 VAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQ 282

Query: 238 NLVVDGGFSV 247
           NLVVDGGFSV
Sbjct: 283 NLVVDGGFSV 292

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  213 bits (542), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/258 (48%), Positives = 174/258 (67%), Gaps = 3/258 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVC-YIHCDVT 59
           L GKVA+ITGGASGIGA  A+LF ++GA+VV+AD+QD LG +L  +LG D   Y+HCDVT
Sbjct: 15  LVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVT 74

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +E ++   VD AVA++GKLD+M+NNAG+       + +  K D +RVLAVN  G FLG K
Sbjct: 75  NEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTK 134

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           HAARVM P  +G I+ TAS  + ++G  S AYT SK+ ++   +  A EL ++G+RVNCV
Sbjct: 135 HAARVMAPARRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCV 194

Query: 180 SPYGLVSGIS-SRNSINPAILEAFLSEMGNLRGQ-VLNAEGIANAALYLATDEASDVTGL 237
           SP G+ + ++ +   ++   +EA ++   NL+G   L A+ IA AAL+LA+D+   V+G 
Sbjct: 195 SPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYVSGQ 254

Query: 238 NLVVDGGFSVANPSLMKF 255
           NL VDGG SV N S   F
Sbjct: 255 NLRVDGGLSVVNSSFGFF 272

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  212 bits (540), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 113/253 (44%), Positives = 166/253 (65%), Gaps = 4/253 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           LEGK+ IITGGASGIGA AA+LF ++GAKVVI DVQ+ LGQ +A  +G+D   +  CDVT
Sbjct: 6   LEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVT 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +E E+ + V   V K+GKLD++++NAG+++    S LD      DR++AVN  G     K
Sbjct: 66  NETEVEDAVKFTVEKHGKLDVLFSNAGVLEP-LESFLDFDLERFDRIMAVNVRGAAAFIK 124

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           HAAR M+ +  +G I+ T S   EI G G   YT SK+G++ L++    +L +YG+RVN 
Sbjct: 125 HAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVNG 183

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+PY + + ++S + +    LE +    G L+G VL A  +A  AL+LA+D+++ ++G N
Sbjct: 184 VAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYISGQN 243

Query: 239 LVVDGGFSVANPS 251
           L VDGG++V  PS
Sbjct: 244 LAVDGGYTVVKPS 256

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  209 bits (532), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/266 (46%), Positives = 165/266 (62%), Gaps = 18/266 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-----VCYIH 55
           LEGKVAIITGGA GIG A   LF  +GA VVIADV +  G +LA  L        V +I 
Sbjct: 32  LEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFIS 91

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV--DRGFASVLDTPKSDLDRVLAVNTTG 113
           CDV+ E ++ NLV+  VA+YG+LDI++NNAG++   +   S+LD    + D V+ VN  G
Sbjct: 92  CDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRG 151

Query: 114 GFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
             LG KH AR MI +  KGCI+ TAS    + G+G  AYT SK+ I+ L K  A EL +Y
Sbjct: 152 VGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKY 211

Query: 173 GLRVNCVSPYGLVSGI---SSRNS-------INPAILEAFLSEMGNLRGQVLNAEGIANA 222
           G+RVNC+SP+G+ + +   + R +        +   +E F+  + NL+G+ L A  IA A
Sbjct: 212 GIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEA 271

Query: 223 ALYLATDEASDVTGLNLVVDGGFSVA 248
           ALYLA+DE+  V G NLVVDGG + A
Sbjct: 272 ALYLASDESKYVNGHNLVVDGGVTTA 297

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  207 bits (526), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 113/249 (45%), Positives = 163/249 (65%), Gaps = 3/249 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           L+GK+ IITGGASGIGA AA+LF ++GAKVVI D+Q+ LGQ +A  +G D   +  CD+T
Sbjct: 6   LDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDIT 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E E+ N V   V K+GKLD++++NAG+++    S+LD      DR +AVN  G     K
Sbjct: 66  DETEVENAVKFTVEKHGKLDVLFSNAGVMEP-HGSILDLDLEAFDRTMAVNVRGAAAFIK 124

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           HAAR M+    +G I+ T S   EI G G  +YT SK+ ++ LV+     L +YG+RVN 
Sbjct: 125 HAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRVNG 184

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+PYG+ +G++S N     ++E + S    L+G VL A  +A+AAL+LA+D++  ++G N
Sbjct: 185 VAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYISGQN 244

Query: 239 LVVDGGFSV 247
           L VDGG+SV
Sbjct: 245 LGVDGGYSV 253

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  191 bits (485), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 110/267 (41%), Positives = 158/267 (59%), Gaps = 12/267 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           L GKVA+ITGGA+GIG +  +LFH++GAKV I D+QD+LG  +   L      E   +IH
Sbjct: 18  LLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIH 77

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV  ED+I+N VD AV  +G LDI+ NNAG+       + +   S+ +    VN  G F
Sbjct: 78  GDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAF 137

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           L  KHAARVMIP+ KG I+   S    + G+G  +Y  SK+ ++ L + +AAEL Q+G+R
Sbjct: 138 LSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIR 197

Query: 176 VNCVSPYGLVSGIS-------SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           VNCVSPY + + ++        R          F +   NL+G  L  + +ANA L+LA+
Sbjct: 198 VNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLAS 257

Query: 229 DEASDVTGLNLVVDGGFSVANPSLMKF 255
           D++  ++G NL++DGGF+  N S   F
Sbjct: 258 DDSRYISGDNLMIDGGFTCTNHSFKVF 284

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/281 (40%), Positives = 161/281 (57%), Gaps = 34/281 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVAI+TGGA GIG A  +LF ++GA+VVIAD+ D  G+ALA  LG  V ++ CDV+ 
Sbjct: 53  LDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSV 112

Query: 61  EDEITNLVDTAVAKYG-KLDIMYNNAGIV---DRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           ED++   VD A++++G +LD+  NNAG++    R   S+L    ++ DRVL VN  G  L
Sbjct: 113 EDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAAL 172

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           G KHAAR M P+  G I+  AS    + G+G  AYT SK+ I+ L K  A ELR +G+RV
Sbjct: 173 GMKHAARAMAPRRAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRV 232

Query: 177 NCVSPYGLVSG----------------------------ISSRNSINPAILEAFLSEMGN 208
           NCVSP+G+ +                             + S   +    +E  +  +  
Sbjct: 233 NCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEK--MEEVVRGLAT 290

Query: 209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN 249
           L+G  L    IA A L+LA+DEA  ++G NLVVDGG + + 
Sbjct: 291 LKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTSR 331

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
225440773	275	PREDICTED: momilactone A synthase-like [	0.841	0.923	0.675	6e-98
224088424	274	predicted protein [Populus trichocarpa]	0.864	0.952	0.660	1e-95
380039550	272	tropinone reductase-like 1 [Erythroxylum	0.834	0.926	0.661	3e-90
380039552	275	tropinone reductase-like 2 [Erythroxylum	0.837	0.92	0.651	2e-89
255579335	288	short chain alcohol dehydrogenase, putat	0.854	0.895	0.657	5e-89
297740170	245	unnamed protein product [Vitis vinifera]	0.774	0.955	0.641	1e-88
6683479	273	wts2L [Citrullus lanatus]	0.841	0.930	0.607	4e-87
449437438	273	PREDICTED: zerumbone synthase-like [Cucu	0.841	0.930	0.596	7e-85
255578631	242	short chain alcohol dehydrogenase, putat	0.721	0.900	0.587	3e-75
359482032	287	PREDICTED: LOW QUALITY PROTEIN: momilact	0.837	0.881	0.566	8e-73

>gi|225440773|ref|XP_002275768.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  363 bits (932), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 173/256 (67%), Positives = 213/256 (83%), Gaps = 2/256 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAI+TGGASGIGA+  +LF ENGAKV+IAD+QD+LGQ +  KLG+DV YIHCDV++
Sbjct: 15  LEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLGQDVSYIHCDVSN 74

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED++ NLVDT ++K+G+LDIMYNNAGI+DR   S+LDT KSDLDR++ VN  G FLGAKH
Sbjct: 75  EDDVQNLVDTTISKHGRLDIMYNNAGILDRHLGSILDTQKSDLDRLIGVNLVGSFLGAKH 134

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVMIPQ KGCILFTAS CT IAGI + +Y V+KYGI  L + LAAEL QYG+RVNCVS
Sbjct: 135 AARVMIPQKKGCILFTASCCTSIAGISTHSYAVTKYGIWGLARNLAAELGQYGIRVNCVS 194

Query: 181 PYGLVSGISSRNSINPAI--LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           PYGL++G+  +   +  +   EA LSEMGNL+G+VL +EG+A AALYLA+DEAS V+GLN
Sbjct: 195 PYGLITGMGQQGLTSEEVEAAEASLSEMGNLKGEVLKSEGVARAALYLASDEASYVSGLN 254

Query: 239 LVVDGGFSVANPSLMK 254
           LVVDGGFSV NP+++K
Sbjct: 255 LVVDGGFSVVNPTMIK 270

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088424|ref|XP_002308449.1| predicted protein [Populus trichocarpa] gi|222854425|gb|EEE91972.1| predicted protein [Populus trichocarpa]

 Score =  355 bits (912), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 173/262 (66%), Positives = 213/262 (81%), Gaps = 1/262 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKV+IITGGASGIGA+A +LFHENGAKVV+AD+QD LGQALA KLGEDVCYIHCDV++
Sbjct: 13  LAGKVSIITGGASGIGASAVQLFHENGAKVVLADIQDTLGQALAQKLGEDVCYIHCDVSN 72

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           EDE++NLVD  V KYGKLDIMYNNAGI+ R   S+LD PKSDLDR+++VN  G FLGAKH
Sbjct: 73  EDEVSNLVDATVKKYGKLDIMYNNAGILGRPLGSILDAPKSDLDRLISVNLVGCFLGAKH 132

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AAR+M+ Q +GCILFTASACT I G+ +PAY V+K+GI+ L K LAAEL QYG+RVNCVS
Sbjct: 133 AARIMVTQGQGCILFTASACTAIGGLATPAYAVTKHGIVGLAKNLAAELGQYGIRVNCVS 192

Query: 181 PYGLVSGISSRNSINPA-ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           PYG+ + +    S + A ++E  L +MGNL+G++   E +A AALYLA+DEA+ V+G+NL
Sbjct: 193 PYGVATPMYEGFSADTAPMIEESLGQMGNLKGKIPKVEDMAKAALYLASDEANYVSGMNL 252

Query: 240 VVDGGFSVANPSLMKFASPFHL 261
           VVDGGFSV NP++MK   P  L
Sbjct: 253 VVDGGFSVVNPTMMKALYPAKL 274

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039550|gb|AFD32319.1| tropinone reductase-like 1 [Erythroxylum coca]

 Score =  337 bits (865), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 168/254 (66%), Positives = 204/254 (80%), Gaps = 2/254 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAIITGGASGIGA  A+LFHENGAKVVIAD+QD+LGQALA KLG   CYIHCDV+ 
Sbjct: 11  LEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSK 70

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVD-RGF-ASVLDTPKSDLDRVLAVNTTGGFLGA 118
           ED++ NLVDT VAKYG+LDIM+NNAGI++ +G   SV+++ KSDLDR+L+VN  G FLGA
Sbjct: 71  EDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGA 130

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           KHA RVM+ Q KGCILFT+S CT IAG+   AY  SK G+  L K L  EL +YG+RVNC
Sbjct: 131 KHATRVMVQQRKGCILFTSSLCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNC 190

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           +SPYGLV+GIS+ +  N  ++EA LSE+G L GQ L A+GIA AAL+LA+DEA  V+G+N
Sbjct: 191 ISPYGLVTGISNISEANRELVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVSGIN 250

Query: 239 LVVDGGFSVANPSL 252
           +VVDGG+SV NP L
Sbjct: 251 MVVDGGYSVVNPRL 264

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039552|gb|AFD32320.1| tropinone reductase-like 2 [Erythroxylum coca]

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 168/258 (65%), Positives = 203/258 (78%), Gaps = 5/258 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAIITGGASGIGA  A+LFHENGAKVVIAD+QD+LGQALA KLG   CYIHCDV+ 
Sbjct: 11  LEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSK 70

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVD-RGF-ASVLDTPKSDLDRVLAVNTTGGFLGA 118
           EDE+ NLVDT VAKYG+LDIM+NNAGI++ +G   SV+++ KSDLDR+L+VN  G FLGA
Sbjct: 71  EDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGA 130

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           KHA RVM+ Q KGCILFT+S CT IAG+   AY  SK G+  L K L  EL +YG+RVNC
Sbjct: 131 KHATRVMVQQRKGCILFTSSVCTSIAGLSGHAYAASKSGVCGLAKNLTPELGKYGIRVNC 190

Query: 179 VSPYGLVSGISS---RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           +SPYGLV+G+S+       N   +EA LSE+G L GQ L A+GIA AAL+LA+DEA  V+
Sbjct: 191 ISPYGLVTGVSNVSGEGEANREFVEAMLSELGTLSGQTLRADGIAKAALFLASDEAYYVS 250

Query: 236 GLNLVVDGGFSVANPSLM 253
           G+N+VVDGG+SV NP L+
Sbjct: 251 GINMVVDGGYSVVNPRLV 268

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579335|ref|XP_002530512.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223529916|gb|EEF31844.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 171/260 (65%), Positives = 210/260 (80%), Gaps = 2/260 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVAIITGGASGIGA+  KLFH NGAKVVIAD+QD LGQA+A  LGEDV Y+HCDV +
Sbjct: 23  LAGKVAIITGGASGIGASTVKLFHGNGAKVVIADIQDELGQAIAENLGEDVFYMHCDVRN 82

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           EDEI+N+VDT V+KYGKLDIMYNNAG++DR   S+LD+ KS+LDR+L+VN  G FLGAKH
Sbjct: 83  EDEISNVVDTTVSKYGKLDIMYNNAGVIDRYLGSILDSTKSELDRLLSVNVVGAFLGAKH 142

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVM+ Q KGCILFT+SACT I GI +  Y V+KYGI+ L K LAAEL Q+G+RVNCVS
Sbjct: 143 AARVMVKQGKGCILFTSSACTAIGGISTHPYAVTKYGIVGLSKNLAAELGQHGIRVNCVS 202

Query: 181 PYGLVSGIS--SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           P G+V+ I+  + +    A  EA +S +GNL+GQVL  E +A AALYLA+DEA+ V+GLN
Sbjct: 203 PSGVVTPIAGVTLSEAEIASAEAAISAVGNLKGQVLRPEDVAKAALYLASDEANYVSGLN 262

Query: 239 LVVDGGFSVANPSLMKFASP 258
           LVVDGG+SV NP++M+  +P
Sbjct: 263 LVVDGGYSVVNPTVMRNFNP 282

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740170|emb|CBI30352.3| unnamed protein product [Vitis vinifera]

 Score =  332 bits (852), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/254 (64%), Positives = 198/254 (77%), Gaps = 20/254 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAI+TGGASGIGA+  +LF ENGAKV+IAD+QD+LGQ +  KLG+DV YIHCDV++
Sbjct: 7   LEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLGQDVSYIHCDVSN 66

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED++ NLVDT ++K+G+LDIMYNNAGI+DR   S+LDT KSDLDR++ VN  G FLGAKH
Sbjct: 67  EDDVQNLVDTTISKHGRLDIMYNNAGILDRHLGSILDTQKSDLDRLIGVNLVGSFLGAKH 126

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVMIPQ KGCILFTAS CT IAGI + +Y V+KYGI  L + LAAEL QYG+RVNCVS
Sbjct: 127 AARVMIPQKKGCILFTASCCTSIAGISTHSYAVTKYGIWGLARNLAAELGQYGIRVNCVS 186

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           PYGL++G+           +   SE           EG+A AALYLA+DEAS V+GLNLV
Sbjct: 187 PYGLITGMGQ---------QGLTSE-----------EGVARAALYLASDEASYVSGLNLV 226

Query: 241 VDGGFSVANPSLMK 254
           VDGGFSV NP+++K
Sbjct: 227 VDGGFSVVNPTMIK 240

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6683479|dbj|BAA89230.1| wts2L [Citrullus lanatus]

 Score =  327 bits (838), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 155/255 (60%), Positives = 205/255 (80%), Gaps = 1/255 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVAIITGGASGIG +A ++FHENGAKV+IAD+QD +GQ +A +LG+DV YIHCDV+ 
Sbjct: 13  LDGKVAIITGGASGIGTSAVRIFHENGAKVIIADIQDEIGQKIADELGDDVSYIHCDVSK 72

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED+++NLVD AV ++GKLDIMY+NAG++DR F+ +LD  KSDLD+VL VN  G F GAKH
Sbjct: 73  EDDVSNLVDAAVHRHGKLDIMYSNAGVLDRSFSGILDVTKSDLDKVLGVNVMGAFWGAKH 132

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVMIP+  GCILFT+SA T IAG+ S  Y  SK  ++ LV+ LAAEL Q+G+RVNCV+
Sbjct: 133 AARVMIPEKNGCILFTSSATTNIAGLSSHPYAASKCAVLGLVRNLAAELGQHGIRVNCVA 192

Query: 181 PYGLVSGIS-SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           P+ + +GI+ SR+ +    LE  ++   NL+G+VL A+ IA AALYLA+D+A+ V+GLNL
Sbjct: 193 PFVVATGIAGSRDPMQAEALETMVTTWANLKGRVLKADDIAKAALYLASDDANYVSGLNL 252

Query: 240 VVDGGFSVANPSLMK 254
           VVDGG+SV NP+++K
Sbjct: 253 VVDGGYSVVNPTMLK 267

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437438|ref|XP_004136499.1| PREDICTED: zerumbone synthase-like [Cucumis sativus] gi|449515867|ref|XP_004164969.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]

 Score =  320 bits (819), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 152/255 (59%), Positives = 200/255 (78%), Gaps = 1/255 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAIITGGASGIGA+A ++FHENGAK++IAD+QD +GQ +A +LGEDV Y+HCDV+ 
Sbjct: 13  LEGKVAIITGGASGIGASAVRIFHENGAKIIIADIQDEVGQKIADELGEDVSYLHCDVSK 72

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E++++N+VD AV ++GKLDIMY+NAG++DR F+ +LD  KSDLD+VL+VN  G F GAKH
Sbjct: 73  EEDVSNVVDAAVYRHGKLDIMYSNAGVIDRSFSGILDVTKSDLDKVLSVNVMGAFWGAKH 132

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVMIPQ  GCILFT+S+ T IAG+ S  Y  SK  ++ LV+ L  EL Q+G+RVNCV+
Sbjct: 133 AARVMIPQKNGCILFTSSSTTNIAGLSSHPYASSKCAVLGLVRNLCVELGQHGIRVNCVA 192

Query: 181 PYGLVSGIS-SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           P+ + + I+  RN +    LE  ++   NL+G VL A+ IA AALYL +DEA  V+GLNL
Sbjct: 193 PFVVATAIAGPRNPMQVEALETMVTSWANLKGCVLKADDIAKAALYLVSDEAKYVSGLNL 252

Query: 240 VVDGGFSVANPSLMK 254
           VVDGG+SV NPS++K
Sbjct: 253 VVDGGYSVVNPSMLK 267

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578631|ref|XP_002530177.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223530338|gb|EEF32232.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  288 bits (736), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 151/257 (58%), Positives = 183/257 (71%), Gaps = 39/257 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAIITGGASGIGAA   LFHENGAK+V+AD++D+LGQ +A +LGE+V YIHCDV++
Sbjct: 13  LEGKVAIITGGASGIGAATVHLFHENGAKIVLADIKDSLGQEIANRLGENVTYIHCDVSN 72

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED++ NLVDT +AK+GKLDIMYNNAG++DR   S+LDT KS+LD +L VN  G FLGAKH
Sbjct: 73  EDDMINLVDTTMAKHGKLDIMYNNAGVMDRSLGSILDTKKSELDLMLKVNLGGAFLGAKH 132

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AARVMIPQ K  +               P                      YG+RVNCVS
Sbjct: 133 AARVMIPQRKVLV--------------HPX--------------------XYGIRVNCVS 158

Query: 181 PYGLVSGISSRNSINPAIL---EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           PYGL+SG++     +PA+L   E  LS+ GNLRGQ L A+GIA AALYLA+DEA  V+GL
Sbjct: 159 PYGLISGMTP--VTDPALLQMAEGILSKAGNLRGQTLRADGIAKAALYLASDEAYYVSGL 216

Query: 238 NLVVDGGFSVANPSLMK 254
           NLVVDGGFSV NP++MK
Sbjct: 217 NLVVDGGFSVVNPTIMK 233

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482032|ref|XP_003632704.1| PREDICTED: LOW QUALITY PROTEIN: momilactone A synthase-like [Vitis vinifera]

 Score =  280 bits (715), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 145/256 (56%), Positives = 186/256 (72%), Gaps = 3/256 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAIITGG SGIG  A  LF ENGAKV+IAD+Q +LGQA+A  LG++  YIHC+VT 
Sbjct: 22  LEGKVAIITGGVSGIGEGAVHLFWENGAKVIIADIQGHLGQAIADNLGKNGTYIHCNVTE 81

Query: 61  EDEITNLVDTA---VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           EDE+  L+D++   V+ YGK DIMYNNAGI+D     +L+  KSDL+RV+ VN  GGFLG
Sbjct: 82  EDEVIKLIDSSHSTVSMYGKPDIMYNNAGIIDTSMEGILNAQKSDLERVIGVNLVGGFLG 141

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           AKHAARVM+P+  GC LFTASACT IAG+ + +Y  SK+ ++ L K LAAEL   G+ V 
Sbjct: 142 AKHAARVMVPRGPGCKLFTASACTSIAGMSTHSYASSKHAVVGLAKNLAAELGLLGINVF 201

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           CV PY + + I    +     +EA L+E+GNL+G VL A  +A AA +LA+DEA+ V+GL
Sbjct: 202 CVLPYVVSTNIGQELADFTPKVEAILNEVGNLKGTVLKASDVARAAHFLASDEATYVSGL 261

Query: 238 NLVVDGGFSVANPSLM 253
           NL VDG +SV NPS++
Sbjct: 262 NLGVDGRYSVVNPSIV 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	302
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.824	0.968	0.434	2.4e-51
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.814	0.825	0.432	2.9e-48
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.824	0.968	0.416	6e-48
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.824	0.965	0.395	3e-46
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.821	0.818	0.421	3.8e-46
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.814	0.949	0.401	3.4e-45
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.847	0.746	0.386	1.3e-43
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.814	0.82	0.4	1.7e-43
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.844	0.894	0.382	2.5e-42
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.811	0.800	0.401	8.4e-42

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
 Identities = 110/253 (43%), Positives = 158/253 (62%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
             L+GK+               +LF E+GA+VVI DVQD LGQ +A  +GED   Y HCDVT
Sbjct:     6 LDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVT 65

Query:    60 SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             +E E+ N V   V KYGKLD++++NAG+++  F S+LD   ++LDR +A+N  G     K
Sbjct:    66 NETEVENAVKFTVEKYGKLDVLFSNAGVIEP-FVSILDLNLNELDRTIAINLRGTAAFIK 124

Query:   120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             HAAR M+ +  +G I+ T S   EIAG     YT SK+G++ L+K  +  L +YG+RVN 
Sbjct:   125 HAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNG 184

Query:   179 VSPYGLVSGISSRN-SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
             V+P+G+ + +      + P ++E   S   NL+G VL A  +A AAL+LA+DE++ V+G 
Sbjct:   185 VAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVSGQ 244

Query:   238 NLVVDGGFSVANP 250
             NL VDGG+SV  P
Sbjct:   245 NLAVDGGYSVVKP 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 108/250 (43%), Positives = 154/250 (61%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
             L+GK+               +LF ++GAKVVI D+Q+ LGQ LA  +G D   +  C+VT
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    60 SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              E ++ N V   V K+GKLD++++NAG+++  F SVLD      DR +AVN  G     K
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE-AFGSVLDLDLEAFDRTMAVNVRGAAAFIK 162

Query:   120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             HAAR M+    +G I+ T S   EI G G  +YT SK+ ++ L++   A L QYG+RVN 
Sbjct:   163 HAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNG 222

Query:   179 VSPYGLVSGISSR-NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
             V+PYG+ +G++S  N     +LE +   +GNL+G VL A  IA AAL+LA+D++  ++G 
Sbjct:   223 VAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQ 282

Query:   238 NLVVDGGFSV 247
             NLVVDGGFSV
Sbjct:   283 NLVVDGGFSV 292

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 105/252 (41%), Positives = 154/252 (61%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
             L+GK+               +LF ++GAKVVI D Q+ LGQ +A  +G+D   +  CDVT
Sbjct:     6 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVT 65

Query:    60 SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             +E E+ N V   V KYGKLD++++NAG++++   S LD      DR +AVN  G     K
Sbjct:    66 NEKEVENAVKFTVEKYGKLDVLFSNAGVMEQP-GSFLDLNLEQFDRTMAVNVRGAAAFIK 124

Query:   120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             HAAR M+ +  +G I+ T S  +EI G G  AYT SK+ ++ LVK     L +YG+RVN 
Sbjct:   125 HAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNG 184

Query:   179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
             V+PY + + I+SR+     ++E + +  G L+G VL A  +A AAL+LA+D+++ V+G N
Sbjct:   185 VAPYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQN 244

Query:   239 LVVDGGFSVANP 250
             L VDGG+SV  P
Sbjct:   245 LAVDGGYSVVKP 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 100/253 (39%), Positives = 153/253 (60%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
             LEGK+               +LF ++GAKVVI DVQ+ LGQ +A  +G+D   +  CDVT
Sbjct:     6 LEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVT 65

Query:    60 SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             +E E+ + V   V K+GKLD++++NAG+++    S LD      DR++AVN  G     K
Sbjct:    66 NETEVEDAVKFTVEKHGKLDVLFSNAGVLEP-LESFLDFDLERFDRIMAVNVRGAAAFIK 124

Query:   120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             HAAR M+ +  +G I+ T S   EI G G   YT SK+G++ L++    +L +YG+RVN 
Sbjct:   125 HAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYTASKHGLVGLIRSACGDLGKYGIRVNG 183

Query:   179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
             V+PY + + ++S + +    LE +    G L+G VL A  +A  AL+LA+D+++ ++G N
Sbjct:   184 VAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYISGQN 243

Query:   239 LVVDGGFSVANPS 251
             L VDGG++V  PS
Sbjct:   244 LAVDGGYTVVKPS 256

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 484 (175.4 bits), Expect = 3.8e-46, P = 3.8e-46
 Identities = 112/266 (42%), Positives = 154/266 (57%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-----VCYIH 55
             LEGKV                LF  +GA VVIADV +  G +LA  L        V +I 
Sbjct:    32 LEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFIS 91

Query:    56 CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV--DRGFASVLDTPKSDLDRVLAVNTTG 113
             CDV+ E ++ NLV+  VA+YG+LDI++NNAG++   +   S+LD    + D V+ VN  G
Sbjct:    92 CDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRG 151

Query:   114 GFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
               LG KH AR MI +  KGCI+ TAS    + G+G  AYT SK+ I+ L K  A EL +Y
Sbjct:   152 VGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKY 211

Query:   173 GLRVNCVSPYGLVSGI---SSRNSINPAI-------LEAFLSEMGNLRGQVLNAEGIANA 222
             G+RVNC+SP+G+ + +   + R +    +       +E F+  + NL+G+ L A  IA A
Sbjct:   212 GIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEA 271

Query:   223 ALYLATDEASDVTGLNLVVDGGFSVA 248
             ALYLA+DE+  V G NLVVDGG + A
Sbjct:   272 ALYLASDESKYVNGHNLVVDGGVTTA 297

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
 Identities = 100/249 (40%), Positives = 150/249 (60%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
             L+GK+               +LF ++GAKVVI D+Q+ LGQ +A  +G D   +  CD+T
Sbjct:     6 LDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDIT 65

Query:    60 SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              E E+ N V   V K+GKLD++++NAG+++    S+LD      DR +AVN  G     K
Sbjct:    66 DETEVENAVKFTVEKHGKLDVLFSNAGVMEP-HGSILDLDLEAFDRTMAVNVRGAAAFIK 124

Query:   120 HAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             HAAR M+    +G I+ T S   EI G G  +YT SK+ ++ LV+     L +YG+RVN 
Sbjct:   125 HAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRVNG 184

Query:   179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
             V+PYG+ +G++S N     ++E + S    L+G VL A  +A+AAL+LA+D++  ++G N
Sbjct:   185 VAPYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYISGQN 244

Query:   239 LVVDGGFSV 247
             L VDGG+SV
Sbjct:   245 LGVDGGYSV 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 102/264 (38%), Positives = 149/264 (56%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             LEGKV                 F  +GAKV+IAD+Q  +G+    +LG    Y  CDVT 
Sbjct:    78 LEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELGPSCAYFPCDVTK 137

Query:    61 EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             E +I N VD AV+ + KLDIMYNNAGI  +   S++D   +  D+V+  N  G   G KH
Sbjct:   138 ESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVINTNVRGVMAGIKH 197

Query:   121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             AARVMIP++ G I+   S    + G+    Y+VSK  +I +V+  A+EL ++ +RVNC+S
Sbjct:   198 AARVMIPRNSGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTASELCKHRIRVNCIS 257

Query:   181 PYGLVSG--ISSRNSINPAILEAFLSEM----GNLRGQVLNAEGIANAALYLATDEASDV 234
             P+ + +   +     I P + ++ L ++    G L G+V     +ANAA+YLA+D++  V
Sbjct:   258 PFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVANAAVYLASDDSKYV 317

Query:   235 TGLNLVVDGGFSVANPSLMKFASP 258
              G NLVVDGGF+      + F +P
Sbjct:   318 NGHNLVVDGGFTTVKT--LDFPAP 339

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
 Identities = 102/255 (40%), Positives = 148/255 (58%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             LEGKV               + F   GA+V+I D+ +  G  +A +LG    ++ CDVT 
Sbjct:    36 LEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHMVATELGSAAHFLRCDVTE 95

Query:    61 EDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             E++I   V+TAV ++GKLD+M N+AGI       S+ D      D+V+ +N  G  LG K
Sbjct:    96 EEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRGTVLGIK 155

Query:   120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
             HAAR MIP   G IL  +S    + G+G  AY++SK+ I  +VK +A+EL ++GLR+NC+
Sbjct:   156 HAARAMIPAGSGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKHGLRINCI 215

Query:   180 SPYGLVSGISSR--------NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
             SP G+ + ++ R        +SI    L A ++  G L+G+      +A AALYLA+D+A
Sbjct:   216 SPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAALYLASDDA 275

Query:   232 SDVTGLNLVVDGGFS 246
               VTG NLVVDGGF+
Sbjct:   276 KFVTGHNLVVDGGFT 290

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
 Identities = 102/267 (38%), Positives = 148/267 (55%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKL--GED---VCYIH 55
             L GKV               +LFH++GAKV I D+QD+LG  +   L  GE      +IH
Sbjct:    18 LLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIH 77

Query:    56 CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
              DV  ED+I+N VD AV  +G LDI+ NNAG+       + +   S+ +    VN  G F
Sbjct:    78 GDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAF 137

Query:   116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             L  KHAARVMIP+ KG I+   S    + G+G  +Y  SK+ ++ L + +AAEL Q+G+R
Sbjct:   138 LSMKHAARVMIPEKKGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIR 197

Query:   176 VNCVSPYGLVSGIS-----SRNSINPAIL--EAFLSEMGNLRGQVLNAEGIANAALYLAT 228
             VNCVSPY + + ++            A +    F +   NL+G  L  + +ANA L+LA+
Sbjct:   198 VNCVSPYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAVLFLAS 257

Query:   229 DEASDVTGLNLVVDGGFSVANPSLMKF 255
             D++  ++G NL++DGGF+  N S   F
Sbjct:   258 DDSRYISGDNLMIDGGFTCTNHSFKVF 284

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
 Identities = 102/254 (40%), Positives = 142/254 (55%)

Query:     1 LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             LEGKV                 F  +GA+VVIAD+    G   A +LG +  ++ CDVT 
Sbjct:    41 LEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELGSEAEFVRCDVTV 100

Query:    61 EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGF-ASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             E +I   V+  V +YGKLD+MYNNAGIV     AS+     ++ +RV+ +N  G   G K
Sbjct:   101 EADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGIK 160

Query:   120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
             HAA+ MIP   GCIL T+S      G+   +YT+SK+    +VK  A+EL ++G+R+NC+
Sbjct:   161 HAAKFMIPARSGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELCEHGVRINCI 220

Query:   180 SPYGLVSG---ISSRNSINPAILEAFLSE----MGNLRGQVLNAEGIANAALYLATDEAS 232
             SP G V+    +S    + P + E  L E    MG L+G       +A AALYLA+++  
Sbjct:   221 SP-GTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAALYLASNDGK 279

Query:   233 DVTGLNLVVDGGFS 246
              VTG NLVVDGG +
Sbjct:   280 YVTGHNLVVDGGMT 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8KWS9	BACC_BACAM	1, ., -, ., -, ., -	0.3531	0.8079	0.9606	yes	no
Q94K41	SDR3B_ARATH	1, ., 1, ., 1, ., -	0.4782	0.8245	0.9688	yes	no
Q8KWT4	BACC2_BACIU	1, ., -, ., -, ., -	0.3625	0.8079	0.9644	yes	no
P39640	BACC_BACSU	1, ., -, ., -, ., -	0.3625	0.8079	0.9644	yes	no
Q56318	Y019_THEMA	1, ., -, ., -, ., -	0.3545	0.8112	0.9570	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.766
4th Layer	1.1.1.101	LOW CONFIDENCE prediction!
3rd Layer	1.1.1.35	LOW CONFIDENCE prediction!
4th Layer	1.1.1.269	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00061408	hypothetical protein (274 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	eugene3.00081696	hypothetical protein (214 aa)			•						0.463
	fgenesh4_pg.C_LG_X000525	hypothetical protein (322 aa)			•						0.460

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	302
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	5e-92
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	1e-85
cd05233	234	cd05233, SDR_c, classical (c) SDRs	5e-63
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-61
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-60
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-56
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	4e-56
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-55
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-52
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-52
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-51
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-50
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-50
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	9e-50
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-49
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-49
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	2e-48
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	7e-48
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	8e-48
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-47
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-46
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-46
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	6e-46
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-45
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-44
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-43
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	5e-43
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-42
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-42
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-42
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-41
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-41
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	2e-41
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	5e-41
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	7e-41
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	9e-41
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	9e-41
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	3e-39
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	8e-39
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-38
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	2e-38
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	3e-38
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-38
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-37
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-37
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-37
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-37
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-36
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-36
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	7e-36
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-35
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	3e-35
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-35
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	9e-35
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	9e-35
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-34
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-34
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-34
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-34
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-34
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	6e-34
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	6e-34
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	8e-34
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-33
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	1e-33
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	1e-33
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-33
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-33
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	3e-33
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-33
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	9e-33
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-32
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-32
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	3e-32
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	4e-32
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	4e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	4e-32
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	6e-32
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	2e-31
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-31
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	7e-31
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	1e-30
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-30
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-30
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	2e-30
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-30
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-30
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-30
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	5e-30
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-29
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-29
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-29
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	2e-29
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-29
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	4e-29
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	4e-29
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	5e-29
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-29
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	7e-29
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-29
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	9e-29
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-28
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	1e-28
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-28
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	5e-28
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	7e-28
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	8e-28
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	9e-28
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-27
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	1e-27
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-27
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-27
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-27
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	4e-27
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	7e-27
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-26
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	2e-26
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	2e-26
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-26
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-26
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-26
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-25
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-25
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	2e-25
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	3e-25
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	3e-25
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	5e-25
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-24
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-24
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-24
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-24
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	3e-24
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	3e-24
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	5e-24
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	6e-24
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	1e-23
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-23
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	4e-23
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	7e-23
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	8e-23
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	9e-23
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-22
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-22
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-22
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	5e-22
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	6e-22
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-21
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	1e-21
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	4e-21
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-20
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-20
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-20
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	3e-20
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	3e-20
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	4e-20
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-20
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	8e-20
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-19
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-19
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	4e-19
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	4e-19
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-19
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-19
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-18
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	4e-18
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-18
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	4e-18
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	7e-18
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	8e-18
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-17
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-17
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	2e-17
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	3e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	4e-17
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	1e-16
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	3e-16
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	7e-16
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	1e-15
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	1e-15
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	3e-15
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	3e-15
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	3e-15
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-15
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-15
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	6e-15
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	7e-15
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	8e-15
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	2e-14
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	2e-14
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	3e-14
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	3e-14
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-14
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	9e-14
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-13
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-13
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	3e-13
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	4e-13
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	9e-13
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-12
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-12
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	2e-12
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	2e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	3e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	5e-12
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	2e-11
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	3e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	3e-11
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	4e-11
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	6e-11
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-11
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	8e-11
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-10
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	2e-10
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-10
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	5e-10
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	8e-10
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	8e-10
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	9e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	9e-10
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-09
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-09
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-09
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-09
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	4e-09
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-08
pfam08659	181	pfam08659, KR, KR domain	2e-08
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-08
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	2e-08
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-08
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	3e-08
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	5e-08
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	6e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	7e-08
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	1e-07
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-07
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	2e-07
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	2e-07
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	2e-07
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	2e-07
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	2e-07
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	3e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	3e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-06
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	2e-06
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	5e-06
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	2e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	3e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	1e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	3e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	4e-04
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	7e-04
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	0.001
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	0.002
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	0.002
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	0.002
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	0.002
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.003
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  273 bits (699), Expect = 5e-92
 Identities = 125/248 (50%), Positives = 173/248 (69%), Gaps = 2/248 (0%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE-DVCYIHCDVT 59
           L+GKVAIITGGASGIG A A+LF ++GA+VVIAD+ D+ GQA+A +LG+ D+ ++HCDVT
Sbjct: 2   LDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDVT 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E ++   VDTAVA++G+LDIM+NNAG++     S+L+T   + +RVL VN  G FLG K
Sbjct: 62  VEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTK 121

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           HAARVMIP  KG I+  AS    + G+G  AYT SK+ ++ L +  A EL ++G+RVNCV
Sbjct: 122 HAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCV 181

Query: 180 SPYGLVSGISSRNS-INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           SPYG+ + + +    +    +E  +    NL+G  L  E IA A LYLA+D++  V+G N
Sbjct: 182 SPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVSGQN 241

Query: 239 LVVDGGFS 246
           LVVDGG +
Sbjct: 242 LVVDGGLT 249

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  258 bits (660), Expect = 1e-85
 Identities = 121/264 (45%), Positives = 170/264 (64%), Gaps = 9/264 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDV 58
           L GKVA++TGGA+GIG +  +LFH++GAKV I D+QD+LGQ +   LG   +VC+ HCDV
Sbjct: 16  LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV 75

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T ED+++  VD  V K+G LDIM NNAG+       + +   S+ ++V  VN  G FLG 
Sbjct: 76  TVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGM 135

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           KHAAR+MIP  KG I+   S  + I G+G  AYT SK+ ++ L + +AAEL ++G+RVNC
Sbjct: 136 KHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNC 195

Query: 179 VSPYGLVSGIS-------SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           VSPY + + ++        R     A   AF  +  NL+G  L  + +ANA L+LA+DEA
Sbjct: 196 VSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEA 255

Query: 232 SDVTGLNLVVDGGFSVANPSLMKF 255
             ++GLNL++DGGF+  N SL  F
Sbjct: 256 RYISGLNLMIDGGFTCTNHSLRVF 279

Length = 280

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  198 bits (506), Expect = 5e-63
 Identities = 86/239 (35%), Positives = 123/239 (51%), Gaps = 7/239 (2%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC--KLGEDVCYIHCDVTSEDE 63
           A++TG +SGIG A A+     GAKVV+AD  +     LA    LG +   +  DV+ E++
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
           +  LV+ A+ ++G+LDI+ NNAGI       + +    D DRVL VN TG FL  + A  
Sbjct: 61  VEALVEEALEEFGRLDILVNNAGIA--RPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 124 VMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYG 183
            M  Q  G I+  +S        G  AY  SK  +  L + LA EL  YG+RVN V+P G
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAP-G 177

Query: 184 LVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVD 242
           LV              +   + +   R  +   E +A A ++LA+DEAS +TG  + VD
Sbjct: 178 LVDTPMLAKLGPEEAEKELAAAIPLGR--LGTPEEVAEAVVFLASDEASYITGQVIPVD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  193 bits (494), Expect = 5e-61
 Identities = 98/251 (39%), Positives = 139/251 (55%), Gaps = 10/251 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKLGE---DVCYIHC 56
           L GKVAI+TG + GIG A A+L  + GAKVVIA D+ +   Q L  ++ E   D   +  
Sbjct: 3   LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKA 62

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+SE+++ NLV+  V K+GK+DI+ NNAGI    F  V D    + DRV+ VN TG  L
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGIS--NFGLVTDMTDEEWDRVIDVNLTGVML 120

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             ++A   MI +  G I+  +S    I       Y+ SK  + A  K LA EL   G+RV
Sbjct: 121 LTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRV 180

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N V+P G +   +   S      +  L+E   L G++   E IA   L+LA+D+AS +TG
Sbjct: 181 NAVAP-GAID--TEMWSSFSEEDKEGLAEEIPL-GRLGKPEEIAKVVLFLASDDASYITG 236

Query: 237 LNLVVDGGFSV 247
             + VDGG++ 
Sbjct: 237 QIITVDGGWTC 247

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  191 bits (489), Expect = 3e-60
 Identities = 96/263 (36%), Positives = 137/263 (52%), Gaps = 31/263 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDV 58
           LEGKVAI+TG +SGIG   A+ F   GA+VV+ D  +   + +A ++        +  DV
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADV 62

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           + E ++   V  A+ ++G +DI+ NNAG   R    +LD  +++ DR+ AVN    +L  
Sbjct: 63  SDEADVEAAVAAALERFGSVDILVNNAGTTHR-NGPLLDVDEAEFDRIFAVNVKSPYLWT 121

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGI-GSP---AYTVSKYGIIALVKILAAELRQYGL 174
           + A   M  +  G I+  AS     AG+   P    Y  SK  +I L K LAAEL    +
Sbjct: 122 QAAVPAMRGEGGGAIVNVAS----TAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKI 177

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR----------GQVLNAEGIANAAL 224
           RVN V+P  +V            +LEAF+ E               G++   E IANAAL
Sbjct: 178 RVNAVAP-VVVET---------GLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAAL 227

Query: 225 YLATDEASDVTGLNLVVDGGFSV 247
           +LA+DEAS +TG+ LVVDGG  V
Sbjct: 228 FLASDEASWITGVTLVVDGGRCV 250

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  182 bits (463), Expect = 2e-56
 Identities = 97/249 (38%), Positives = 132/249 (53%), Gaps = 7/249 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVAI+TGGA G+G A A+L    GAKVV++D+ D  GQA A +LG+   + H DVT 
Sbjct: 3   LKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFHLDVTD 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED  T +VDTA   +G+LD++ NNAGI+  G   V  T   +  R+L +N TG FLG + 
Sbjct: 63  EDGWTAVVDTAREAFGRLDVLVNNAGILTGGT--VETTTLEEWRRLLDINLTGVFLGTRA 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ--YGLRVNC 178
               M     G I+  +S    +      AY  SK  +  L K  A E     YG+RVN 
Sbjct: 121 VIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVNS 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V P G +    +             +      G+    + IA A +YLA+DE+S VTG  
Sbjct: 181 VHP-GYIYTPMTDEL--LIAQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESSFVTGSE 237

Query: 239 LVVDGGFSV 247
           LVVDGG++ 
Sbjct: 238 LVVDGGYTA 246

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  181 bits (461), Expect = 4e-56
 Identities = 95/253 (37%), Positives = 137/253 (54%), Gaps = 13/253 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAI+TG  SG G   A+ F + GA+VVIAD+  +  + +A  +GE    I  DVT 
Sbjct: 3   LEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQADVTK 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             ++  +V+ A++K+G+LDI+ NNAGI  R    +L+  + + DRV AVN    +L A+ 
Sbjct: 63  RADVEAMVEAALSKFGRLDILVNNAGITHRN-KPMLEVDEEEFDRVFAVNVKSIYLSAQA 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLRV 176
               M  Q  G I+  AS     AG+    G   Y  SK  ++   K +A EL    +RV
Sbjct: 122 LVPHMEEQGGGVIINIAST----AGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRV 177

Query: 177 NCVSPYGLVSGISSR--NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           NC+ P    + + S       P     F + +    G++   + IANAALYLA+DEAS +
Sbjct: 178 NCLCPVAGETPLLSMFMGEDTPENRAKFRATIP--LGRLSTPDDIANAALYLASDEASFI 235

Query: 235 TGLNLVVDGGFSV 247
           TG+ L VDGG  +
Sbjct: 236 TGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  180 bits (459), Expect = 1e-55
 Identities = 89/249 (35%), Positives = 125/249 (50%), Gaps = 13/249 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L+GK A++TG + GIG A A     +GAKVVI D  +   +ALA      G +   +  D
Sbjct: 3   LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ E  +  L++ AV  +G LDI+ NNAGI     A +    + D DRV+ VN TG F  
Sbjct: 63  VSDEAAVRALIEAAVEAFGALDILVNNAGIT--RDALLPRMSEEDWDRVIDVNLTGTFNV 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            + A   MI    G I+  +S        G   Y+ +K G+I   K LA EL   G+ VN
Sbjct: 121 VRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVN 180

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            V+P G +    +       +    L E  +G L GQ    E +ANA  +LA+D AS +T
Sbjct: 181 AVAP-GFIDTDMTEGL-PEEVKAEILKEIPLGRL-GQ---PEEVANAVAFLASDAASYIT 234

Query: 236 GLNLVVDGG 244
           G  + V+GG
Sbjct: 235 GQVIPVNGG 243

Length = 246

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  182 bits (465), Expect = 1e-52
 Identities = 94/260 (36%), Positives = 129/260 (49%), Gaps = 21/260 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDV 58
           L GKVA++TG A GIG A AK     GA VV+AD+ +   +A A +LG       + CDV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTGGFL 116
           T E  +    + A   +G +DI+ +NAGI      S  + +T   D  R   VN TG FL
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNAGI----AISGPIEETSDEDWRRSFDVNATGHFL 535

Query: 117 GAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            A+ A R+M  Q  G  I+F AS      G    AY  +K   + LV+ LA EL   G+R
Sbjct: 536 VAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIR 595

Query: 176 VNCVSPYGLV--SGISSR---------NSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
           VN V+P  +V  SGI +            ++   LE F     NL  + +  E +A A +
Sbjct: 596 VNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRA-RNLLKREVTPEDVAEAVV 654

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +LA+   S  TG  + VDGG
Sbjct: 655 FLASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  172 bits (437), Expect = 2e-52
 Identities = 105/251 (41%), Positives = 138/251 (54%), Gaps = 7/251 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALA--CKLGEDVCYIHCD 57
           L GKVAIITG +SGIG AAAKLF   GAKVV+ A  Q  L Q +A     G +   +  D
Sbjct: 4   LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V  E     LV  AV ++G LDI +NNAG +      V +         LA N T  FLG
Sbjct: 64  VRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLG 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           AKH    M+ +  G ++FT++     AG  G  AY  SK G+I L ++LAAE    G+RV
Sbjct: 123 AKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRV 182

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N + P G  + +       P  L AF++ +  L+ ++   E IA AAL+LA+D AS VTG
Sbjct: 183 NALLPGGTDTPMGRAMGDTPEAL-AFVAGLHALK-RMAQPEEIAQAALFLASDAASFVTG 240

Query: 237 LNLVVDGGFSV 247
             L+VDGG S+
Sbjct: 241 TALLVDGGVSI 251

Length = 254

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  169 bits (429), Expect = 3e-51
 Identities = 99/260 (38%), Positives = 136/260 (52%), Gaps = 26/260 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+VA+ITGG SGIG A A+     GA VV+ D+    G+A A ++G    ++  DVT 
Sbjct: 5   LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG--GLFVPTDVTD 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED +  L DTA   YG +DI +NNAGI      S+L+T      RV  VN T  +L  K 
Sbjct: 63  EDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKA 122

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSP----AYTVSKYGIIALVKILAAELRQYGLRV 176
           A   M+ Q KG I+ TAS    +A +GS     +YT SK G++A+ + L  +  + G+RV
Sbjct: 123 ALPHMVRQGKGSIINTASF---VAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRV 179

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLS--EMGNLR------GQVLNAEGIANAALYLAT 228
           N + P G V+         P + E F    E    R      G+    E IA A  +LA+
Sbjct: 180 NALCP-GPVN--------TPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLAS 230

Query: 229 DEASDVTGLNLVVDGGFSVA 248
           D+AS +T    +VDGG S A
Sbjct: 231 DDASFITASTFLVDGGISGA 250

Length = 255

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  166 bits (423), Expect = 2e-50
 Identities = 85/254 (33%), Positives = 125/254 (49%), Gaps = 13/254 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA------DVQDNLGQALACKLGEDVCYI 54
           L GKVA++TG +SGIG A A+     GA+VV+A      +  + L  A+    G     +
Sbjct: 3   LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAV 62

Query: 55  HCDVTS-EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
             DV+  E+ +  LV  A  ++G++DI+ NNAGI     A + +  + D DRV+ VN  G
Sbjct: 63  AADVSDDEESVEALVAAAEEEFGRIDILVNNAGIA-GPDAPLEELTEEDWDRVIDVNLLG 121

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            FL  + A  +M  Q    I+  +S        G  AY  SK  +I L K LA EL   G
Sbjct: 122 AFLLTRAALPLMKKQR---IVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRG 178

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           +RVN V+P G +    +    +  +            G++   E +A A  +LA+DEA+ 
Sbjct: 179 IRVNAVAP-GYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAAS 237

Query: 234 -VTGLNLVVDGGFS 246
            +TG  L VDGG  
Sbjct: 238 YITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  166 bits (423), Expect = 3e-50
 Identities = 93/263 (35%), Positives = 128/263 (48%), Gaps = 27/263 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+GKVA++TG ASGIG   A    + GAKVVIAD+ D    A A  L   G     +  D
Sbjct: 2   LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMD 61

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT E+ I   +D AV  +G +DI+ NNAGI  +  A + D P     +++A+   G FL 
Sbjct: 62  VTDEEAINAGIDYAVETFGGVDILVNNAGI--QHVAPIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K A  +M  Q  G I+  AS    +   G  AY  +K+G+I L K++A E   +G+ VN
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179

Query: 178 CVSPYGLV---------------SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
            + P G V                GIS    +   +L            +    E IA+ 
Sbjct: 180 AICP-GYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQ------KRFTTVEEIADY 232

Query: 223 ALYLATDEASDVTGLNLVVDGGF 245
           AL+LA+  A  VTG   VVDGG+
Sbjct: 233 ALFLASFAAKGVTGQAWVVDGGW 255

Length = 258

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  165 bits (419), Expect = 9e-50
 Identities = 86/259 (33%), Positives = 133/259 (51%), Gaps = 29/259 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVA++TGGASGIG A A+LF   GA+V + D  +++ +  A  LG +   + CDV+ 
Sbjct: 13  LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD 72

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +   V   ++ +G++DI+ N+AG+     A   D  + D D+ + +N  G FL A+ 
Sbjct: 73  SQSVEAAVAAVISAFGRIDILVNSAGVA--LLAPAEDVSEEDWDKTIDINLKGSFLMAQA 130

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R MI    G I+  AS    +A     AY  SK G++ + K+LA E   YG+ VN +S
Sbjct: 131 VGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAIS 190

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMG--NLRGQVLNA----------EGIANAALYLAT 228
           P                ++   L +      +G+              E IA AAL+LA+
Sbjct: 191 P---------------TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLAS 235

Query: 229 DEASDVTGLNLVVDGGFSV 247
           D A+ +TG NLV+DGG+++
Sbjct: 236 DAAAMITGENLVIDGGYTI 254

Length = 255

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  164 bits (418), Expect = 1e-49
 Identities = 88/252 (34%), Positives = 135/252 (53%), Gaps = 11/252 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L+GKVA++TG +SGIG A A      GA VV+      D  + + + +    G+ +    
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAV-Q 59

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV+ E+++  L  +A+ ++G LDI+ NNAG+  +G AS  +    D ++V+ VN TG F
Sbjct: 60  ADVSKEEDVVALFQSAIKEFGTLDILVNNAGL--QGDASSHEMTLEDWNKVIDVNLTGQF 117

Query: 116 LGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           L A+ A +       KG I+  +S   +I   G   Y  SK G+  + K LA E    G+
Sbjct: 118 LCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGI 177

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVN ++P  + + I++    +P      LS +    G++   E IA AA +LA+DEAS V
Sbjct: 178 RVNAIAPGAINTPINAEAWDDPEQRADLLSLIP--MGRIGEPEEIAAAAAWLASDEASYV 235

Query: 235 TGLNLVVDGGFS 246
           TG  L VDGG +
Sbjct: 236 TGTTLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  164 bits (418), Expect = 1e-49
 Identities = 90/251 (35%), Positives = 129/251 (51%), Gaps = 12/251 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA---CKLGEDVCYIHC 56
           LEGKVA++TG + GIG A A+     GA VVI     +   +AL      LG     +  
Sbjct: 3   LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQG 62

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+  + +   VD A A++G +DI+ NNAGI       ++   + D DRV+  N TG F 
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFN 120

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             K  AR M+ Q  G I+  +S    +   G   Y  SK G+I   K LA EL   G+ V
Sbjct: 121 LTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITV 180

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVT 235
           N V+P G +      +++   + EA L+++   R GQ    E IA+A  +LA+DEA+ +T
Sbjct: 181 NAVAP-GFI-ETDMTDALPEDVKEAILAQIPLGRLGQ---PEEIASAVAFLASDEAAYIT 235

Query: 236 GLNLVVDGGFS 246
           G  L V+GG  
Sbjct: 236 GQTLHVNGGMV 246

Length = 248

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  161 bits (410), Expect = 2e-48
 Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 21/255 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH---CD 57
           LEG+VA++TG A GIG A A     +GA+V++ D+  +   A A  +            D
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V     +   V   V  +G+LDI+  NAGI      + +D      +RV+ VN TG FL 
Sbjct: 64  VRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDE--QWERVIDVNLTGTFLL 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAG-----IGSPAYTVSKYGIIALVKILAAELRQY 172
            + A   +I    G I+ T+S    +AG      G   Y  SK G++   + LA EL   
Sbjct: 122 TQAALPALIRAGGGRIVLTSS----VAGPRVGYPGLAHYAASKAGLVGFTRALALELAAR 177

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDE 230
            + VN V P G+ + +             +   +      G++   E IA A L+LA+DE
Sbjct: 178 NITVNSVHPGGVDTPM-----AGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDE 232

Query: 231 ASDVTGLNLVVDGGF 245
           A  +TG  L VDGG 
Sbjct: 233 ARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  160 bits (406), Expect = 7e-48
 Identities = 87/251 (34%), Positives = 130/251 (51%), Gaps = 11/251 (4%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ--ALACKLGEDVCYIHCDVTS 60
           GKVA++TGGASGIG A AK     GA VV+AD+   + +  A A + G     + CDVTS
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E ++ +  + AV ++G LDI+ +NAGI       + +T   D +R + +N TG FL ++ 
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATSS--PIAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 121 AARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           A R+M  Q   G I+F AS      G  + AY+ +K     L + LA E  + G+RVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 180 SPYGLVSGISSRNSI---NPAILEAFLSE---MGNLRGQVLNAEGIANAALYLATDEASD 233
           +P  +  G      +     A     L E     NL  + +  E +A A + +A+++   
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFGK 238

Query: 234 VTGLNLVVDGG 244
            TG  + VDGG
Sbjct: 239 TTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  159 bits (405), Expect = 8e-48
 Identities = 100/254 (39%), Positives = 135/254 (53%), Gaps = 10/254 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDV 58
           L G+VAI+TG  SGIG A AKLF   GA+VV+AD      + +A  +  G        DV
Sbjct: 3   LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDV 62

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
            S + +  LVD   A++G+LD++ NNAG    G  +V+ T ++D D V+ VN  G FL A
Sbjct: 63  GSAEAVEALVDFVAARWGRLDVLVNNAGFGCGG--TVVTTDEADWDAVMRVNVGGVFLWA 120

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           K+A  +M  Q  G I+ TAS      G G  AY  SK  I +L + +A +    G+RVN 
Sbjct: 121 KYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNA 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN----AEGIANAALYLATDEASDV 234
           V+P G +     R           L E    R   +N    AE +A AAL+LA+DE+S  
Sbjct: 181 VAP-GTIDTPYFRRIFARHADPEALREALRAR-HPMNRFGTAEEVAQAALFLASDESSFA 238

Query: 235 TGLNLVVDGGFSVA 248
           TG  LVVDGG+  A
Sbjct: 239 TGTTLVVDGGWLAA 252

Length = 252

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  159 bits (403), Expect = 2e-47
 Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 5/248 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKLGEDVCYIHCD 57
             GKVA++TGGA+GIG A A  F   GAKVV+AD     G+   AL  + G +  ++ CD
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT + E+  LV+  +A YG+LD  +NNAGI +     + +  +++ D ++ VN  G +L 
Sbjct: 65  VTRDAEVKALVEQTIAAYGRLDYAFNNAGI-EIEQGRLAEGSEAEFDAIMGVNVKGVWLC 123

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K+   +M+ Q  G I+ TAS     A      Y  SK+ +I L K  A E  + G+RVN
Sbjct: 124 MKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVN 183

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            V P  + + +  R          F + M  + G++   E +A+A LYL +D AS  TG 
Sbjct: 184 AVCPAVIDTDMFRRAYEADPRKAEFAAAMHPV-GRIGKVEEVASAVLYLCSDGASFTTGH 242

Query: 238 NLVVDGGF 245
            L+VDGG 
Sbjct: 243 ALMVDGGA 250

Length = 253

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  155 bits (395), Expect = 3e-46
 Identities = 83/254 (32%), Positives = 127/254 (50%), Gaps = 14/254 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED----VCYIHC 56
           L+GKVAI+TGG+ GIG A A+   E GA V I        +  A +L +          C
Sbjct: 6   LKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKC 65

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+S++ +          +GK+DI+  NAGI        LD      ++V+ VN  G F 
Sbjct: 66  DVSSQESVEKTFKQIQKDFGKIDILIANAGITVH--KPALDYTYEQWNKVIDVNLNGVFN 123

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSP--AYTVSKYGIIALVKILAAELRQYGL 174
            A+ AA++   Q KG ++ TAS    I     P  AY  SK  +I L K LA E  +Y +
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFI 183

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASD 233
           RVN +SP  + + ++    ++  + + + S +   R       E +  A LYLA+D +S 
Sbjct: 184 RVNSISPGYIDTDLTD--FVDKELRKKWESYIPLKRIAL---PEELVGAYLYLASDASSY 238

Query: 234 VTGLNLVVDGGFSV 247
            TG +L++DGG++ 
Sbjct: 239 TTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  155 bits (394), Expect = 4e-46
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNL--GQALACKLGEDVCYIHCD 57
           L+GKVA++TG + GIG   A    E GA +VI    ++     Q L  K G +     CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ E+ I   V+     +GK+DI+ NNAGI+ R      + P+++   V+ VN  G F  
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRR--HPAEEFPEAEWRDVIDVNLNGVFFV 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++  AR MI Q  G I+   S  +E+ G   PAY  SK G+  L K LA E  ++G++VN
Sbjct: 121 SQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVN 180

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE-MGNLRGQVLNAEGIANAALYLATDEASDVTG 236
            ++P    + ++     +P   +  L        GQ    E +  AA++LA+D +  V G
Sbjct: 181 AIAPGYFATEMTEAVVADPEFNDDILKRIPAGRWGQ---PEDLVGAAVFLASDASDYVNG 237

Query: 237 LNLVVDGGFSV 247
             + VDGG+  
Sbjct: 238 QIIFVDGGWLA 248

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  155 bits (394), Expect = 6e-46
 Identities = 85/256 (33%), Positives = 123/256 (48%), Gaps = 14/256 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
           L+G   ++TGGASGIG A A+ F E GA+V + DV +  L    A   G  V     DV 
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVA 68

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              ++  + DTAV ++G LD++ NNAGI       + +      ++ LAVN  G F  A+
Sbjct: 69  DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGG-IDEITPEQWEQTLAVNLNGQFYFAR 127

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
            A  ++    H G I+  +S    +   G   Y  SK+ ++ LVK LA EL   G+RVN 
Sbjct: 128 AAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNA 187

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN---------AEGIANAALYLATD 229
           + P G+V G   R  I  A  +     +  +  + L           E IA  AL+LA+ 
Sbjct: 188 ILP-GIVRGPRMRRVI-EARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALFLASP 245

Query: 230 EASDVTGLNLVVDGGF 245
            A  +TG  + VDG  
Sbjct: 246 AARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  153 bits (390), Expect = 2e-45
 Identities = 82/246 (33%), Positives = 120/246 (48%), Gaps = 13/246 (5%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC---KLGEDVCYIHCDVTS 60
           KVA++TG + GIG A A      GAKV + D  +            LG +   +  DV+ 
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + +  LV+   A++G +DI+ NNAGI       ++   + D D V+ VN TG F   + 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGITRDNL--LMRMSEEDWDAVINVNLTGVFNVTQA 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R MI +  G I+  +S    I   G   Y  SK G+I   K LA EL   G+ VN V+
Sbjct: 119 VIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAVA 178

Query: 181 PYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           P G +    +   +   + E  L +  +G L G     E +ANA  +LA+D+AS +TG  
Sbjct: 179 P-GFIDTDMTDA-LPEKVKEKILKQIPLGRL-GT---PEEVANAVAFLASDDASYITGQV 232

Query: 239 LVVDGG 244
           L V+GG
Sbjct: 233 LHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  151 bits (383), Expect = 2e-44
 Identities = 89/248 (35%), Positives = 134/248 (54%), Gaps = 6/248 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVAI+TG  +GIGAA A      GA+VV+AD+     QA+  ++      +  DVT 
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E ++  L + AV ++G LD++ NNAG +     +++DT  +  D+ +A+N  G FL  +H
Sbjct: 61  EQQVAALFERAVEEFGGLDLLVNNAGAMHLT-PAIIDTDLAVWDQTMAINLRGTFLCCRH 119

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AA  MI +  G I+  +S   +    G  AY  SK  I  L + LAAELR  G+R N ++
Sbjct: 120 AAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALA 179

Query: 181 PYGLVSGISSRNSI----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           P GL+        +           F   +  L+G++   E +A A ++L +D+AS +TG
Sbjct: 180 P-GLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFITG 238

Query: 237 LNLVVDGG 244
             L VDGG
Sbjct: 239 QVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  147 bits (373), Expect = 5e-43
 Identities = 78/247 (31%), Positives = 121/247 (48%), Gaps = 18/247 (7%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSE 61
           A++TG + GIG A A    + GAKV+I     +   + +  +L   G     + CDV+  
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           +++  +V+    + G +DI+ NNAGI        +   + D D V+  N TG F   +  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNLL--MRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            R+MI Q  G I+  +S    +   G   Y  SK G+I   K LA EL    + VN V+P
Sbjct: 119 LRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAP 178

Query: 182 YGLVSGISS--RNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            G    I +   + ++  + +  LS+  +G   G     E +ANA  +LA+DEAS +TG 
Sbjct: 179 -GF---IDTDMTDKLSEKVKKKILSQIPLGRF-GTP---EEVANAVAFLASDEASYITGQ 230

Query: 238 NLVVDGG 244
            + VDGG
Sbjct: 231 VIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  147 bits (373), Expect = 5e-43
 Identities = 82/248 (33%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L GK A++TG A G+GAA A+   E GA V   D      + LA  L   G     I  D
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAAD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +     +    D A A  G LD + NNAGI +   A+ LD      D V+ VN  G FL 
Sbjct: 65  LADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDI--DTWDAVMNVNVRGTFLM 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            + A   +    +G I+  AS           AY  SK  +I + + LA EL   G+ VN
Sbjct: 123 LRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVN 182

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P GL +  ++           +L      R QV   + +A A L+L +D A  VTG 
Sbjct: 183 AIAP-GLTATEATAYVPADERHAYYLKGRALERLQV--PDDVAGAVLFLLSDAARFVTGQ 239

Query: 238 NLVVDGGF 245
            L V+GGF
Sbjct: 240 LLPVNGGF 247

Length = 250

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  145 bits (369), Expect = 4e-42
 Identities = 92/262 (35%), Positives = 134/262 (51%), Gaps = 28/262 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALAC--KLGEDVCYIHCD 57
           L GK A++TGG+ G+G   A+   E GA+VV+ A   + L +A A    LG D  +I  D
Sbjct: 10  LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAAD 69

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V  E +I  L +  + ++G +DI+ NNAG    G A   D P    D+V+ +N  G FL 
Sbjct: 70  VADEADIERLAEETLERFGHVDILVNNAG-ATWG-APAEDHPVEAWDKVMNLNVRGLFLL 127

Query: 118 AKHAARV-MIPQHKGCILFTASACTEIAGI-GSP-------AYTVSKYGIIALVKILAAE 168
           ++  A+  MIP+  G I+  AS    +AG+ G+P       AY  SK  +I   + LAAE
Sbjct: 128 SQAVAKRSMIPRGYGRIINVAS----VAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAE 183

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE---MGNLRGQVLNAEGIANAALY 225
              +G+RVN ++P G      +R ++    L   L     +G L       E +  AAL 
Sbjct: 184 WGPHGIRVNAIAP-GFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDD----EDLKGAALL 236

Query: 226 LATDEASDVTGLNLVVDGGFSV 247
           LA+D +  +TG  L VDGG S 
Sbjct: 237 LASDASKHITGQILAVDGGVSA 258

Length = 259

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  145 bits (368), Expect = 4e-42
 Identities = 89/252 (35%), Positives = 128/252 (50%), Gaps = 8/252 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVAI+TGGA+ IGAA A+     GA+V I D+  + G A+A  LGE   +I  D+T 
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +  I   V T VA++G++DI+ N A   +D G AS     ++D    L VN     + A+
Sbjct: 64  DAAIERAVATVVARFGRVDILVNLACTYLDDGLAS----SRADWLAALDVNLVSAAMLAQ 119

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A   +     G I+   S   + A  G   Y  SK  I  L + +A +L   G+RVN V
Sbjct: 120 AAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSV 178

Query: 180 SPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           SP    S +    S  + A  +   +   +L G+V + E +A    +L +D AS VTG +
Sbjct: 179 SPGWTWSRVMDELSGGDRAKADRVAAPF-HLLGRVGDPEEVAQVVAFLCSDAASFVTGAD 237

Query: 239 LVVDGGFSVANP 250
             VDGG+S   P
Sbjct: 238 YAVDGGYSALGP 249

Length = 261

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  144 bits (366), Expect = 7e-42
 Identities = 87/258 (33%), Positives = 132/258 (51%), Gaps = 27/258 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           LEGKV +ITGG++G+G A A  F +  AKVVI              +++   G+A+A   
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIA--- 61

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                 +  DVT E ++ NL+ TAV ++G LD+M NNAGI +       +    D ++V+
Sbjct: 62  ------VKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA--VPSHEMSLEDWNKVI 113

Query: 108 AVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILA 166
             N TG FLG++ A +  +    KG I+  +S   +I       Y  SK G+  + + LA
Sbjct: 114 NTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLA 173

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
            E    G+RVN + P  + + I++    +P    A +  M  + G +   E IA  A +L
Sbjct: 174 MEYAPKGIRVNNIGPGAINTPINAEKFADPK-QRADVESMIPM-GYIGKPEEIAAVAAWL 231

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+ EAS VTG+ L  DGG
Sbjct: 232 ASSEASYVTGITLFADGG 249

Length = 261

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  144 bits (365), Expect = 1e-41
 Identities = 73/248 (29%), Positives = 111/248 (44%), Gaps = 10/248 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
           L G+VA++TG A G+G A A      GA VV+    D             LG     +  
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT +  +   V  AV ++G++DI+ NNAGI +     + D    + D V+ VN +G F 
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDK--PLADMSDDEWDEVIDVNLSGVFH 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             +     M  Q  G I+  +S        G   Y  +K G++ L K LA EL +YG+ V
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N V+P  + + +           +   + +G   G     E IA A  +L +D +  +TG
Sbjct: 182 NMVAPGDIDTDMKEATIEEAREAKDAETPLG-RSGT---PEDIARAVAFLCSDASDYITG 237

Query: 237 LNLVVDGG 244
             + V GG
Sbjct: 238 QVIEVTGG 245

Length = 249

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  143 bits (363), Expect = 2e-41
 Identities = 93/263 (35%), Positives = 137/263 (52%), Gaps = 27/263 (10%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE---DVCYIHCDVT 59
           GK A++TG ASGIG A A+     GA VV+ D  +   +A A   G+    V Y+  DVT
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            EDEI +++  A A++G LDI+ NNAGI  +  A + + P  D DR++AV  T  F   +
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGI--QHVAPIEEFPPEDWDRIIAVMLTSAFHTIR 118

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A   M  Q  G I+  ASA   +A     AY  +K+G+I L K+LA E+ ++G+ VN +
Sbjct: 119 AALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAI 178

Query: 180 SPYGLV---------------SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
            P G V                GI     I   +L+      G    + +  + +A  AL
Sbjct: 179 CP-GYVRTPLVEKQIADQAKTRGIPEEQVIREVMLK------GQPTKRFVTVDEVAETAL 231

Query: 225 YLATDEASDVTGLNLVVDGGFSV 247
           YLA+D A+ +TG  +V+DGG++ 
Sbjct: 232 YLASDAAAQITGQAIVLDGGWTA 254

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  149 bits (378), Expect = 2e-41
 Identities = 89/256 (34%), Positives = 134/256 (52%), Gaps = 12/256 (4%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE 61
           + +V ++TG A GIG AA + F   G +VV+AD      +  A  LG D   +  DV+ E
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDE 63

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
            +I    +    ++G++D++ NNAG+ D    + LDT   +  R+ A+N TG +L A+ A
Sbjct: 64  AQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREA 123

Query: 122 ARVMI-PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
            R+MI   H   I+  AS    +A     AY+ SK  +I+L + LA E    G+RVN V 
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDEASDVT 235
           P G V     R  +   +  A   +   +R     G++   E IA A  +LA+D+AS +T
Sbjct: 184 P-GYV-----RTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYIT 237

Query: 236 GLNLVVDGGFSVANPS 251
           G  LVVDGG++V   S
Sbjct: 238 GSTLVVDGGWTVYGGS 253

Length = 520

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  142 bits (359), Expect = 5e-41
 Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 7/245 (2%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
           GKVAI+TGG  GIG      F E G KVV AD+ +  G   A   G ++ ++H DV  E 
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            +  +V   + K G++D++ NNA    +G  S L     + DR+L+VN TG +  +++  
Sbjct: 61  LVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSL--LLEEWDRILSVNLTGPYELSRYCR 118

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
             +I ++KG I+  AS     +   S AY  SK G++AL   LA  L    +RVNC+SP 
Sbjct: 119 DELI-KNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPG 176

Query: 183 GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVD 242
            + +      +  P   E       +  G+V   + IAN  L+L   +A  +TG   +VD
Sbjct: 177 WINTTEQQEFTAAPLTQE---DHAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFIVD 233

Query: 243 GGFSV 247
           GG + 
Sbjct: 234 GGMTK 238

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  142 bits (359), Expect = 7e-41
 Identities = 81/252 (32%), Positives = 125/252 (49%), Gaps = 11/252 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKL-GEDVCYI 54
           L GKVAIITG +SGIGA  A LF   GA++ +       +++     L   +  + +  +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             D+T E+    ++ T +AK+G+LDI+ NNAGI+ +G     D    + D+V+ +N    
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKG--GGEDQDIEEYDKVMNLNLRAV 118

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
               K A   +I + KG I+  +S     +  G   Y +SK  +    +  A EL   G+
Sbjct: 119 IYLTKLAVPHLI-KTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGV 177

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEAS 232
           RVN VSP  +V+G   R  +       FLS        G+    + +A A  +LA+D +S
Sbjct: 178 RVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASS 237

Query: 233 DVTGLNLVVDGG 244
            +TG  L VDGG
Sbjct: 238 FITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  141 bits (358), Expect = 9e-41
 Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 15/237 (6%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG--QALACKLGE-DVCYIHCDVTS 60
           KVAIITGGASGIG A AKL  + GAKV I D  +N G    L     +    ++ CDVTS
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG---GFLG 117
            +++      A+ K+G++DI+ NNAGI+D              ++ + VN TG       
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYL 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL-RQYGLRV 176
           A H          G I+   S          P Y+ SK+G++   + LA  L  + G+RV
Sbjct: 121 ALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRV 180

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           N + P G          + P  L A  +EM        + E +A A +YL  D+  +
Sbjct: 181 NAICP-GFT-----NTPLLPD-LVAKEAEMLP-SAPTQSPEVVAKAIVYLIEDDEKN 229

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  141 bits (358), Expect = 9e-41
 Identities = 82/262 (31%), Positives = 130/262 (49%), Gaps = 31/262 (11%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED----VCYIHCD 57
           E K+ +ITG A  IG A  K     GA++++AD+     + L  +L       V  +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFL 116
           +TS++ I  L+++ + K+G++DI+ NNA    +   +   + P    + VL VN  G FL
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSP--------------AYTVSKYGIIALV 162
            ++   ++   Q KG I+  AS    I G+ +P               Y+V K GII L 
Sbjct: 121 CSQAFIKLFKKQGKGSIINIAS----IYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLT 176

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
           K LA      G+RVN +SP G++      N+     LE +  +      ++LN E +  A
Sbjct: 177 KYLAKYYADTGIRVNAISPGGIL------NNQPSEFLEKYTKKCPL--KRMLNPEDLRGA 228

Query: 223 ALYLATDEASDVTGLNLVVDGG 244
            ++L +D +S VTG NLV+DGG
Sbjct: 229 IIFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  137 bits (348), Expect = 3e-39
 Identities = 79/256 (30%), Positives = 120/256 (46%), Gaps = 18/256 (7%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDV 58
            KVAIITG A GIG A A+    +G  +V+AD+          +     G +   +  DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T +D++  L+D AV K+G  D+M NNAGI       +L   + DL +V AVN  G   G 
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIA--PITPLLTITEEDLKKVYAVNVFGVLFGI 119

Query: 119 KHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           + AAR      H G I+  +S           AY+ SK+ +  L +  A EL   G+ VN
Sbjct: 120 QAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVN 179

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLR---------GQVLNAEGIANAALYLAT 228
             +P G+V      + I+  + E      G            G++   E +A    +LA+
Sbjct: 180 AYAP-GIV-KTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLAS 237

Query: 229 DEASDVTGLNLVVDGG 244
           +++  +TG  ++VDGG
Sbjct: 238 EDSDYITGQTILVDGG 253

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  136 bits (345), Expect = 8e-39
 Identities = 76/259 (29%), Positives = 130/259 (50%), Gaps = 22/259 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+ KVAI+TGG+ GIG A      E G+ V+  D+++            DV Y   DV++
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKE--------PSYNDVDYFKVDVSN 55

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ++++   +D  ++KYG++DI+ NNAGI    + ++    + + DR++ VN  G FL +K+
Sbjct: 56  KEQVIKGIDYVISKYGRIDILVNNAGI--ESYGAIHAVEEDEWDRIINVNVNGIFLMSKY 113

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG--LRVNC 178
               M+ Q KG I+  AS  +      + AY  SK+ ++ L + +A +   Y   +R   
Sbjct: 114 TIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVD---YAPTIRCVA 170

Query: 179 VSPYGLVSGISSRNSI-----NPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEA 231
           V P  + + +    +      +P  +E  + E G +    +V   E +A    +LA+D A
Sbjct: 171 VCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLA 230

Query: 232 SDVTGLNLVVDGGFSVANP 250
           S +TG  + VDGG     P
Sbjct: 231 SFITGECVTVDGGLRALIP 249

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 1e-38
 Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 29/258 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           L GKVA++TG + GIG A AK    +GA VV+             A+++   G+A+A + 
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQ- 59

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                    DV+   ++  L D A   +G +DI+ NNAG++      + +T + + DR+ 
Sbjct: 60  --------ADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML--KKPIAETSEEEFDRMF 109

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
            VNT G F   + AA+ +     G I+  +S+ T        AY  SK  + A  ++LA 
Sbjct: 110 TVNTKGAFFVLQEAAKRLRD--GGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAK 167

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           EL   G+ VN V+P  + + +        A+            G+    E IA    +LA
Sbjct: 168 ELGGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLGRLGEP---EDIAPVVAFLA 224

Query: 228 TDEASDVTGLNLVVDGGF 245
           + +   V G  +  +GG+
Sbjct: 225 SPDGRWVNGQVIRANGGY 242

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  136 bits (344), Expect = 2e-38
 Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 17/263 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+VA+ITGG SGIG A  + F   GA+V + +       +L  + G+ V  +  DVTS
Sbjct: 4   LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTS 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL----DRVLAVNTTGGFL 116
             +    VD  V  +GKLD    NAGI D    S++D P   L    D +  VN  G  L
Sbjct: 64  YADNQRAVDQTVDAFGKLDCFVGNAGIWDY-NTSLVDIPAETLDTAFDEIFNVNVKGYLL 122

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           GAK A   +     G ++FT S  +   G G P YT SK+ ++ LV+ LA EL    +RV
Sbjct: 123 GAKAALPALK-ASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRV 180

Query: 177 NCVSPYGLVS--------GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           N V+P G V+        G    +  +   L   ++ +  L       E      + LA+
Sbjct: 181 NGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQPEDHTGPYVLLAS 239

Query: 229 DEASD-VTGLNLVVDGGFSVANP 250
              S  +TG+ +  DGG  +   
Sbjct: 240 RRNSRALTGVVINADGGLGIRGI 262

Length = 263

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 3e-38
 Identities = 83/265 (31%), Positives = 130/265 (49%), Gaps = 36/265 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVA++TG ASGIG A A+ +   GA+VVIAD++    +  A ++G     +  DVT 
Sbjct: 4   LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTR 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +D I  +V  AV ++G +DI++NNA + D   A +LD  +   DR+ AVN  G F   + 
Sbjct: 64  QDSIDRIVAAAVERFGGIDILFNNAALFD--MAPILDISRDSYDRLFAVNVKGLFFLMQA 121

Query: 121 AARVMIPQ-HKGCILFTASACTEIAG-IGSP---AYTVSKYGIIALVKILAAELRQYGLR 175
            AR M+ Q   G I+  AS     AG  G      Y  +K  +I+  +  A  L ++G+ 
Sbjct: 122 VARHMVEQGRGGKIINMASQ----AGRRGEALVSHYCATKAAVISYTQSAALALIRHGIN 177

Query: 176 VNCVSPYGLVSGISSRNSINPA--ILEAFLSEMGNLR--------------GQVLNAEGI 219
           VN ++P G+V          P    ++A  +   N                G++   + +
Sbjct: 178 VNAIAP-GVVDT--------PMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDL 228

Query: 220 ANAALYLATDEASDVTGLNLVVDGG 244
              AL+LA+ +A  +      VDGG
Sbjct: 229 TGMALFLASADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 3e-38
 Identities = 86/261 (32%), Positives = 125/261 (47%), Gaps = 23/261 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           L GKVA++TG A GIGAA A+ F   GA V +AD+   L +  A  +     G  V  + 
Sbjct: 5   LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVP 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DVT    +   V  A   +G LD++ NNAGI    FA  L     D  R  AV+  G +
Sbjct: 65  ADVTDAASVAAAVAAAEEAFGPLDVLVNNAGI--NVFADPLAMTDEDWRRCFAVDLDGAW 122

Query: 116 LGAKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            G +     M+ + +G I+  AS  A   I   G   Y V+K+G++ L + L  E     
Sbjct: 123 NGCRAVLPGMVERGRGSIVNIASTHAFKIIP--GCFPYPVAKHGLLGLTRALGIEYAARN 180

Query: 174 LRVNCVSPYGLVSGISSRNSIN----PAILEAF---LSEMGNLRGQVLNAEGIANAALYL 226
           +RVN ++P G +    + +  N    PA   A    L  M  + G+    E +A  A++L
Sbjct: 181 VRVNAIAP-GYIETQLTEDWWNAQPDPAAARAETLALQPMKRI-GR---PEEVAMTAVFL 235

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
           A+DEA  +    + +DGG SV
Sbjct: 236 ASDEAPFINATCITIDGGRSV 256

Length = 260

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  133 bits (337), Expect = 1e-37
 Identities = 69/194 (35%), Positives = 102/194 (52%), Gaps = 19/194 (9%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE 61
           +G VA++TGGASG+G A  +     GAKVVI D+ ++ G+ +A KLG++  ++  DVTSE
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA-KLGDNCRFVPVDVTSE 59

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGI--------VDRGFASVLDTPKSDLDRVLAVNTTG 113
            ++   +  A AK+G+LDI+ N AGI                L+       RV+ VN  G
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLE----LFQRVINVNLIG 115

Query: 114 GFLGAKHAARVM---IPQ---HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
            F   + AA  M    P     +G I+ TAS       IG  AY+ SK GI+ +   +A 
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIAR 175

Query: 168 ELRQYGLRVNCVSP 181
           +L   G+RV  ++P
Sbjct: 176 DLAPQGIRVVTIAP 189

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  132 bits (334), Expect = 4e-37
 Identities = 72/259 (27%), Positives = 125/259 (48%), Gaps = 20/259 (7%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----DNLGQALACKLGEDVCY-IHC 56
             +VA++ GG   +GA       E G +V +AD+      N+ Q +  + GE + Y    
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGA 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D TSE  +  L       +G++D++  NAGI     A + D    D DR L VN  G FL
Sbjct: 61  DATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFL 118

Query: 117 GAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            A+  +R+MI    +G I+   S   ++    +  Y+ +K+G + L + LA +L +YG+ 
Sbjct: 119 CAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178

Query: 176 VNCV-------SPY--GLVSGISSRNSINPA-ILEAFLSEMGNLRGQVLNAEGIANAALY 225
           V+ +       SP    L+   + +  I P  + + ++ ++   RG   + + + N  L+
Sbjct: 179 VHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG--CDYQDVLNMLLF 236

Query: 226 LATDEASDVTGLNLVVDGG 244
            A+ +AS  TG ++ V GG
Sbjct: 237 YASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  131 bits (333), Expect = 5e-37
 Identities = 71/229 (31%), Positives = 108/229 (47%), Gaps = 6/229 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC-DVT 59
           L+GKVA+ITG +SGIG A A+   E GAKVV+A  ++   +ALA ++G         DVT
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVT 63

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
               +   ++    ++G++DI+ NNAG +  G   + +    D DR++  N  G   G +
Sbjct: 64  DRAAVEAAIEALPEEFGRIDILVNNAG-LALG-DPLDEADLDDWDRMIDTNVKGLLNGTR 121

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                M+ +  G I+   S        G   Y  +K  + A    L  EL   G+RV  +
Sbjct: 122 AVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVI 181

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           SP GLV   ++  S      +   ++     G  L  E IA A L+ AT
Sbjct: 182 SP-GLVE--TTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFAAT 227

Length = 246

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  131 bits (332), Expect = 7e-37
 Identities = 86/261 (32%), Positives = 123/261 (47%), Gaps = 32/261 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHC 56
           L+GKVA ITGG +GIG A AK F E GA V IA    +V +   + ++   G     I C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAG---------IVDRGFASVLDTPKSDLDRVL 107
           DV   + +   VD  + ++GK+DI+ NNA          +   GF +V+D          
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDI--------- 111

Query: 108 AVNTTGGFLGAKHAA-RVMIPQHKGCILFTASACTEIAGIGSPAYT---VSKYGIIALVK 163
             +  G F   K    R++  +H G IL  ++     A  GSP       +K G+ AL +
Sbjct: 112 --DLNGTFNTTKAVGKRLIEAKHGGSILNISAT---YAYTGSPFQVHSAAAKAGVDALTR 166

Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
            LA E   YG+RVN ++P G +        + P+             G++   E IAN A
Sbjct: 167 SLAVEWGPYGIRVNAIAP-GPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLA 225

Query: 224 LYLATDEASDVTGLNLVVDGG 244
           L+L +D AS + G  LVVDGG
Sbjct: 226 LFLLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  138 bits (349), Expect = 1e-36
 Identities = 85/267 (31%), Positives = 122/267 (45%), Gaps = 20/267 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-----VCYIH 55
           L  +VA +TGGA GIG   A+     GA VV+AD+     +A+A ++           + 
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALK 471

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DVT E  +          YG +DI+ NNAGI     +   +T   +    L +  TG F
Sbjct: 472 MDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYF 529

Query: 116 LGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           L A+ A R M  Q   G I+F AS     AG  + AY+ +K     L + LAAE   YG+
Sbjct: 530 LVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGI 589

Query: 175 RVNCVSPYGLV--SGISSRN---------SINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
           RVN V+P  ++  SGI              I    LE   ++   L+  +  A+ IA A 
Sbjct: 590 RVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPAD-IAEAV 648

Query: 224 LYLATDEASDVTGLNLVVDGGFSVANP 250
            +LA+ ++   TG  + VDGG   A  
Sbjct: 649 FFLASSKSEKTTGCIITVDGGVPAAFL 675

Length = 676

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  129 bits (327), Expect = 4e-36
 Identities = 78/257 (30%), Positives = 124/257 (48%), Gaps = 17/257 (6%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-----NLGQALACKLGEDVCYIHCD 57
           GKVA++TG  SGIG   A+     GA +V+    D      +   LA K G  V Y   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++    I ++V  A  ++G +DI+ NNAGI  +  A + D P    D ++A+N +  F  
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGI--QHVAPIEDFPTEKWDAIIALNLSAVFHT 119

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            + A   M  Q  G I+  AS    +A     AY  +K+G++ L K++A E    G+  N
Sbjct: 120 TRLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCN 179

Query: 178 CVSP-YGL-------VSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
            + P + L       +S ++ +N +         L E      Q +  E + + A++LA+
Sbjct: 180 AICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLE-KQPSKQFVTPEQLGDTAVFLAS 238

Query: 229 DEASDVTGLNLVVDGGF 245
           D AS +TG  + VDGG+
Sbjct: 239 DAASQITGTAVSVDGGW 255

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  129 bits (327), Expect = 7e-36
 Identities = 68/194 (35%), Positives = 96/194 (49%), Gaps = 7/194 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKV  ITGGA GIG A A+     GA+V I D+ + L +  A +LG  V     DVT 
Sbjct: 3   LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVV-GGPLDVTD 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
                  +D   A  G +D++ NNAG++  G    LD P +   R+L VN  G  LG+K 
Sbjct: 62  PASFAAFLDAVEADLGPIDVLVNNAGVMPVG--PFLDEPDAVTRRILDVNVYGVILGSKL 119

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AA  M+P+ +G ++  AS   +I   G   Y  SK+ ++        ELR  G+ V+ V 
Sbjct: 120 AAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVL 179

Query: 181 P----YGLVSGISS 190
           P      L++G   
Sbjct: 180 PSFVNTELIAGTGG 193

Length = 273

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 2e-35
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 11/251 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHC 56
           L+G+VA +TG  SGIG   A    + GA V + D++ + G A   +     G     I  
Sbjct: 6   LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAA 65

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVTS+ ++   V    A+ G L +  N AGI +   A   +  +     V+ +N TG FL
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPA--EEMEEEQWQTVMDINLTGVFL 123

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIA--GIGSPAYTVSKYGIIALVKILAAELRQYGL 174
             +  AR M+    G I+  AS    I   G+    Y  SK G+I L K LA E    G+
Sbjct: 124 SCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGI 183

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVN +SP    + +++R  +   + +  L E      ++   + +   A++L +D AS  
Sbjct: 184 RVNSISPGYTATPMNTRPEM---VHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFC 240

Query: 235 TGLNLVVDGGF 245
           TG++L+VDGGF
Sbjct: 241 TGVDLLVDGGF 251

Length = 254

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  127 bits (320), Expect = 3e-35
 Identities = 81/252 (32%), Positives = 128/252 (50%), Gaps = 17/252 (6%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE 61
           +GKVA+IT  A GIG A A  F   GA V+  D+ +   + L    G  +     DVT +
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELE--RGPGITTRVLDVTDK 58

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           ++    V     + G++D+++N AG V  G  S+LD    D D  + +N    +L  K  
Sbjct: 59  EQ----VAALAKEEGRIDVLFNCAGFVHHG--SILDCEDDDWDFAMNLNVRSMYLMIKAV 112

Query: 122 ARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
              M+ +  G I+  +S  + I G+     Y+ +K  +I L K +AA+  Q G+R N + 
Sbjct: 113 LPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAIC 172

Query: 181 PYGLVSGISSRNSI----NP-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           P G V   S    I    +P   L+AF +      G++   E +A  A+YLA+DE++ VT
Sbjct: 173 P-GTVDTPSLEERIQAQPDPEEALKAFAARQ--PLGRLATPEEVAALAVYLASDESAYVT 229

Query: 236 GLNLVVDGGFSV 247
           G  +V+DGG+S+
Sbjct: 230 GTAVVIDGGWSL 241

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 5e-35
 Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 40/272 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GK+ I+TGG+SGIG A  K    NGA VV AD+    GQ       E+  ++  DV+S
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSS 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPK----------SDLDRVLAVN 110
            +E+ + V   + K+G++D + NNAGI       +L   K          +  D++  +N
Sbjct: 61  AEEVNHTVAEIIEKFGRIDGLVNNAGI---NIPRLLVDEKDPAGKYELNEAAFDKMFNIN 117

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
             G FL ++  AR M+ QH G I+  +S        G   Y  +K  + +  +  A EL 
Sbjct: 118 QKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELG 177

Query: 171 QYGLRVNCVSPYGLVSGIS----------------SRNSINPAILEAFLSEMGNLRGQVL 214
           ++ +RV  V+P     GI                 +R      +   +        G+  
Sbjct: 178 KHNIRVVGVAP-----GILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSG 232

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
               +A+   YL +D AS +TG+   + GG +
Sbjct: 233 KLSEVADLVCYLLSDRASYITGVTTNIAGGKT 264

Length = 266

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  131 bits (331), Expect = 9e-35
 Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 18/250 (7%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
            +V  ITGGA GIG A A  F   G +++I D      + LA  LG++   +  D+T E 
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA 328

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            + +      A++G+LD++ NNAGI +  F   L+    D  RV  VN +G F  A+ AA
Sbjct: 329 AVESAFAQIQARWGRLDVLVNNAGIAEV-FKPSLEQSAEDFTRVYDVNLSGAFACARAAA 387

Query: 123 RVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           R+M    +G ++    +   +  +    AY  SK  +  L + LA E    G+RVN V+P
Sbjct: 388 RLM---SQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP 444

Query: 182 -YGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDEASDVT 235
            Y     +        A+  +  ++  ++R     G++ + E +A A  +LA+  AS V 
Sbjct: 445 GYIETPAVL-------ALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVN 497

Query: 236 GLNLVVDGGF 245
           G  L VDGG+
Sbjct: 498 GATLTVDGGW 507

Length = 520

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 9e-35
 Identities = 85/261 (32%), Positives = 123/261 (47%), Gaps = 32/261 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
           L+GK A+ITGG SGIG   A+ F   GA+V I      +L  A A +LGE    I  D  
Sbjct: 4   LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARA-ELGESALVIRADAG 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF---- 115
                  L       +G+LD ++ NAG+    FA + D  ++  DR    N  G +    
Sbjct: 63  DVAAQKALAQALAEAFGRLDAVFINAGVAK--FAPLEDWDEAMFDRSFNTNVKGPYFLIQ 120

Query: 116 ----LGAKHAARVMIPQHKGCILFTASACTEI-AGIGSP---AYTVSKYGIIALVKILAA 167
               L A  A+ V+                 I A IG P    Y  SK  +++L K L+ 
Sbjct: 121 ALLPLLANPASIVL--------------NGSINAHIGMPNSSVYAASKAALLSLAKTLSG 166

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALY 225
           EL   G+RVN VSP  + + +  +  +  A L+A  +++  L   G+    E IA A LY
Sbjct: 167 ELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLY 226

Query: 226 LATDEASDVTGLNLVVDGGFS 246
           LA+DE++ + G  ++VDGG S
Sbjct: 227 LASDESAFIVGSEIIVDGGMS 247

Length = 249

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  125 bits (317), Expect = 1e-34
 Identities = 83/263 (31%), Positives = 120/263 (45%), Gaps = 37/263 (14%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-QALACKL----GEDVCY-IHCDVT 59
           A ITG A G+G A A+   E GAKV + D+ D  G  A A ++    GE V +    DVT
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E +   L+  A    G L ++ NNAG+   G  ++      +  RV+A+N    FLG K
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGSFG--AIEQIELDEWRRVMAINVESIFLGCK 119

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           HA   +       I+  +S     A     AY  SK  + +L K +A +  + GL V C 
Sbjct: 120 HALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRC- 178

Query: 180 SPYGLVSGISSRNSINPA-----ILEAFLSEMGN---LR--------GQVLNAEGIANAA 223
                       NSI+P      I++     +G     R        G++   + +A+A 
Sbjct: 179 ------------NSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAV 226

Query: 224 LYLATDEASDVTGLNLVVDGGFS 246
           LYLA+DE+  VTG  LV+DGG  
Sbjct: 227 LYLASDESRFVTGAELVIDGGIC 249

Length = 251

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  125 bits (316), Expect = 2e-34
 Identities = 83/267 (31%), Positives = 124/267 (46%), Gaps = 27/267 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ----------------ALA 44
           LEGKVA ITG A G G A A      GA ++  D+   L                   L 
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 45  CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
             LG  V     DV    E+  +V+  V ++G+LD++  NAG++  G +  L   +   D
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGRSWELS--EEQWD 118

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIALVK 163
            VL +N TG +   K     MI +  G  I+ T+S     A  G   Y  +K+G++ L K
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSI------NPAILEAFLSEMGNLRGQVLNAE 217
            LA EL +YG+RVN + PY + + + +  ++       P    AF+          +  E
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMP--ALPVSGFVPPE 236

Query: 218 GIANAALYLATDEASDVTGLNLVVDGG 244
            +A+A L+LA+DE+  +TG  L VD G
Sbjct: 237 DVADAVLWLASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  124 bits (314), Expect = 2e-34
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 35/257 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              K  +ITG ASGIG A A+ F   GA+V   D QD         L  +  ++  D++ 
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKP------DLSGNFHFLQLDLSD 56

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +      ++        +DI+ N AGI+D  +  +LDT   +   +   N T  FL  + 
Sbjct: 57  D------LEPLFDWVPSVDILCNTAGILD-DYKPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
               M+ +  G I+   S  + +AG G  AYT SK+ +    K LA +  + G++V  ++
Sbjct: 110 YLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIA 169

Query: 181 PYGLVSGISSRNSINPAILEA-FLSEMGNLRGQV---------LNAEGIANAALYLATDE 230
           P           ++   +  A F  E G L   V            E +A   L+LA+ +
Sbjct: 170 P----------GAVKTPMTAADF--EPGGLADWVARETPIKRWAEPEEVAELTLFLASGK 217

Query: 231 ASDVTGLNLVVDGGFSV 247
           A  + G  + +DGG+++
Sbjct: 218 ADYMQGTIVPIDGGWTL 234

Length = 235

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  125 bits (315), Expect = 3e-34
 Identities = 81/254 (31%), Positives = 130/254 (51%), Gaps = 16/254 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG--QALACKLGEDVCYIHCDV 58
           L+GKVAI+TGG +G+G   A    + GA ++I     N    + L  K G  V ++  D+
Sbjct: 13  LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEKEGRKVTFVQVDL 72

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T  +    +V  A+ ++GK+DI+ NNAG + R  A +L+    D + V+ +N    +  +
Sbjct: 73  TKPESAEKVVKEALEEFGKIDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLS 130

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +  A+VM  Q  G I+  AS  +   G   PAYT SK+G+  L K  A EL  Y ++VN 
Sbjct: 131 QAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNA 190

Query: 179 VSPYGLVS-----GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           ++P G +       I +  + N  IL+   +      G+    + +  AA++LA+  +  
Sbjct: 191 IAP-GYIKTANTAPIRADKNRNDEILKRIPA------GRWGEPDDLMGAAVFLASRASDY 243

Query: 234 VTGLNLVVDGGFSV 247
           V G  L VDGG+ V
Sbjct: 244 VNGHILAVDGGWLV 257

Length = 258

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  124 bits (314), Expect = 3e-34
 Identities = 74/252 (29%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHCDVT 59
           +VAI+T   SGIG A A L  + G  + I    D  G           G        D++
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              E    +D  + + G++D++ NNAG + +  A  LD    +  ++  V+  G FL ++
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQ 120

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
            AAR M+ Q   G I+   S        G+ AYT +K+ +  L K +A EL ++G+ VN 
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNA 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+P  + + ++  +  +        S  G   G+  +   IA+   +L ++ AS  TG +
Sbjct: 181 VAPGAIATPMNGMDDSDVKP----DSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQS 236

Query: 239 LVVDGGFSVANP 250
           L+VDGGF +ANP
Sbjct: 237 LIVDGGFMLANP 248

Length = 256

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  123 bits (312), Expect = 6e-34
 Identities = 79/248 (31%), Positives = 124/248 (50%), Gaps = 6/248 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L GK+A++TG + GIG A AKL  + GA V+++  + +  QA+A      G     + C 
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACH 65

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +   ++I  L      ++G+LDI+ NNA   +  F  +LDT      + + VN  G F  
Sbjct: 66  IGEMEQIDALFAHIRERHGRLDILVNNAA-ANPYFGHILDTDLGAFQKTVDVNIRGYFFM 124

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           +  A ++M  Q  G I+  AS      G     Y+++K  +I++ K  A E   +G+RVN
Sbjct: 125 SVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVN 184

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            + P    +  +S    N AIL+  L+ +   R        +A A LYLA+D +S  TG 
Sbjct: 185 ALLPGLTDTKFASALFKNDAILKQALAHIPLRR--HAEPSEMAGAVLYLASDASSYTTGE 242

Query: 238 NLVVDGGF 245
            L VDGG+
Sbjct: 243 CLNVDGGY 250

Length = 252

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  124 bits (312), Expect = 6e-34
 Identities = 87/260 (33%), Positives = 124/260 (47%), Gaps = 18/260 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+G+VA+ITGG SG+G A  + F   GAKV + D        L    G+ V  +  DV S
Sbjct: 2   LKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGDAVVGVEGDVRS 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL----DRVLAVNTTGGFL 116
             +    V   V ++GKLD    NAGI D    S++D P+  L    D +  +N  G  L
Sbjct: 62  LADNERAVARCVERFGKLDCFIGNAGIWDY-STSLVDIPEEKLDEAFDELFHINVKGYIL 120

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           GAK A   +    +G ++FT S      G G P YT SK+ ++ LVK LA EL  + +RV
Sbjct: 121 GAKAALPALY-ATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IRV 178

Query: 177 NCVSPYGLVS--------GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           N V+P G+V+        G    +   P + +  L  +  L G     E    A ++LA+
Sbjct: 179 NGVAPGGMVTDLRGPASLGQGETSISTPPLDD-MLKSILPL-GFAPEPEDYTGAYVFLAS 236

Query: 229 -DEASDVTGLNLVVDGGFSV 247
             +    TG  +  DGG  V
Sbjct: 237 RGDNRPATGTVINYDGGMGV 256

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  123 bits (310), Expect = 8e-34
 Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 10/247 (4%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC-----KLGEDVCYIHCDVTS 60
           A++TGG+ GIG A A    E GA VVI + + +   A        +LG     +  DV+ 
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVI-NYRKSKDAAAEVAAEIEELGGKAVVVRADVSQ 59

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             ++  +      ++G+LD++ +NA      F  + +   +  D  +  N       A+ 
Sbjct: 60  PQDVEEMFAAVKERFGRLDVLVSNAAA--GAFRPLSELTPAHWDAKMNTNLKALVHCAQQ 117

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AA++M  +  G I+  +S  +  A     A   +K  + ALV+ LA EL   G+RVN VS
Sbjct: 118 AAKLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVS 177

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G++   +  +  N   L    +      G+V   + +A+A  +L +D A  +TG  LV
Sbjct: 178 P-GVIDTDALAHFPNREDLLEAAAAN-TPAGRVGTPQDVADAVGFLCSDAARMITGQTLV 235

Query: 241 VDGGFSV 247
           VDGG S+
Sbjct: 236 VDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  123 bits (310), Expect = 1e-33
 Identities = 69/247 (27%), Positives = 118/247 (47%), Gaps = 10/247 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-QALACKLGEDVCYIHCDVTSED 62
           +V ++TG + G+GAA A+ F   GA+VV+   +     +A+A + GE    I  DV   D
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRDRD 60

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL-GAKHA 121
           ++  +++ A   +G +D + NNA ++D  F          +D         G + GA + 
Sbjct: 61  QVQAMIEEAKNHFGPVDTIVNNA-LIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 122 ARVMIPQHK----GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            + ++P  K    G ++   +   +   +    YT +K  ++   + +A EL  YG+ VN
Sbjct: 120 LQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITVN 179

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            VS  GL+    +  +    + +A         G+V   + IA+A L+ A+  A  VTG 
Sbjct: 180 MVSG-GLLKVTDASAATPKEVFDAIAQ--TTPLGKVTTPQDIADAVLFFASPWARAVTGQ 236

Query: 238 NLVVDGG 244
           NLVVDGG
Sbjct: 237 NLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  124 bits (312), Expect = 1e-33
 Identities = 73/255 (28%), Positives = 132/255 (51%), Gaps = 18/255 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCD 57
           LE KVA+ITG ++GIG A+A    + GA V+  D+ + +      +    G+   Y H D
Sbjct: 4   LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAY-HVD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++ E ++ +       ++G++D+++NNAG VD     + + P    D+++AV+  G FL 
Sbjct: 63  ISDEQQVKDFASEIKEQFGRVDVLFNNAG-VDNAAGRIHEYPVDVFDKIMAVDMRGTFLM 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K    +M+ Q  G I+ T+S   + A +    Y  +K  +I   K +A E  + G+R N
Sbjct: 122 TKMLLPLMMEQ-GGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 178 CVSP----YGLVSGIS--SRNSINPAILEA--FLSEMGNLRGQVLNAEGIANAALYLATD 229
            ++P      LV  ++  S +       E   +++ +G L G+    E +A   ++LA+D
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRL-GK---PEEVAKLVVFLASD 236

Query: 230 EASDVTGLNLVVDGG 244
           ++S +TG  + +DGG
Sbjct: 237 DSSFITGETIRIDGG 251

Length = 272

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  123 bits (309), Expect = 1e-33
 Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 12/253 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GK A+ITG A GIG A A+ +   GA+V IAD+     +A A ++G   C I  DVT 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +  I   V   V ++G +DI+ NNA + D   A ++D  +   DR+ A+N +G     + 
Sbjct: 61  QASIDRCVAALVDRWGSIDILVNNAALFD--LAPIVDITRESYDRLFAINVSGTLFMMQA 118

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR MI Q   G I+  AS            Y  +K  +I+L +     L ++G+ VN +
Sbjct: 119 VARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 178

Query: 180 SPYGLVSG--------ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           +P G+V G          +R    P   +  L       G++  AE +   A++LA+ +A
Sbjct: 179 AP-GVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFLASTDA 237

Query: 232 SDVTGLNLVVDGG 244
             +      VDGG
Sbjct: 238 DYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 1e-33
 Identities = 89/256 (34%), Positives = 132/256 (51%), Gaps = 38/256 (14%)

Query: 1   LEGKVAIITGGA-SGIGAAAAKLFHENGAKVVIADVQDN-LGQA---LACKLGED-VCYI 54
           L GKV ++T  A +GIG+A A+   E GA+VVI+D+ +  LG+    LA +LG   V  +
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
            CDVTSE ++  L+D AV + G+LD++ NNAG+   G   V+D    +  RVL V  TG 
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVNNAGL--GGQTPVVDMTDDEWSRVLDVTLTGT 132

Query: 115 FLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
           F   + A R M  + H G I+  AS     A  G   Y  +K G++AL +  A E  +YG
Sbjct: 133 FRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYG 192

Query: 174 LRVNCVSPY-------------GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA 220
           +R+N V+P               L+  +++R        EAF        G+      +A
Sbjct: 193 VRINAVAPSIAMHPFLAKVTSAELLDELAAR--------EAF--------GRAAEPWEVA 236

Query: 221 NAALYLATDEASDVTG 236
           N   +LA+D +S +TG
Sbjct: 237 NVIAFLASDYSSYLTG 252

Length = 262

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 2e-33
 Identities = 81/248 (32%), Positives = 122/248 (49%), Gaps = 17/248 (6%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
           GK  ++TG +SGIG A A    + GA+VV A         LA + G +   +  DV  + 
Sbjct: 9   GKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEP--LRLDVGDDA 66

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            I      A+A  G  D + N AGI      S LD      DRV+AVN  G  L A+H A
Sbjct: 67  AI----RAALAAAGAFDGLVNCAGIAS--LESALDMTAEGFDRVMAVNARGAALVARHVA 120

Query: 123 RVMIPQHKGCILFTASACTEIAG-IGSP---AYTVSKYGIIALVKILAAELRQYGLRVNC 178
           R MI   +G  +   S+    A  +G P   AY  SK  + A+ ++L  EL  +G+RVN 
Sbjct: 121 RAMIAAGRGGSIVNVSS---QAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNS 177

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+P   ++ +++    +P      L+ +   R      + +A   L+L +D AS V+G++
Sbjct: 178 VNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFA--EVDDVAAPILFLLSDAASMVSGVS 235

Query: 239 LVVDGGFS 246
           L VDGG++
Sbjct: 236 LPVDGGYT 243

Length = 245

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  122 bits (308), Expect = 3e-33
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 15/254 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L GK A+ITG   GIG   A++F  +GA +++ D+   + + LA +L   G     +  D
Sbjct: 4   LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVAD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V     +   +  A  K G++DI+ NNAG+      S LD    D D  + +N  G +  
Sbjct: 63  VRDPASVAAAIKRAKEKEGRIDILVNNAGVCR--LGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEI-AGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            K     MI +  G I+  +S   ++ A  G  AY ++K  I+ L K LA E  Q G+RV
Sbjct: 121 TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 177 NCVSP----YGLVSGISSRNSINPAILEAFLSEM--GNLRGQVLNAEGIANAALYLATDE 230
           N + P      +   I+     NP   E+ L+EM       ++ +   +   A +LA+DE
Sbjct: 181 NAICPGYVRTPMAESIA--RQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDE 238

Query: 231 ASDVTGLNLVVDGG 244
           +S +TG   V+DGG
Sbjct: 239 SSYLTGTQNVIDGG 252

Length = 263

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  122 bits (308), Expect = 3e-33
 Identities = 79/251 (31%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED----VCYIHCDV 58
            KV I+TGG+ GIG    + F ENGAKVV     +  GQAL  +L         ++ CDV
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDV 68

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T E++I  L+   V ++G++D + NNAG       +  +T   +   +L +N    FL +
Sbjct: 69  TKEEDIKTLISVTVERFGRIDCLVNNAGW-HPPHQTTDETSAQEFRDLLNLNLISYFLAS 127

Query: 119 KHAARVMIP---QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           K+A    +P   + +G I+  +S    I    +  Y  +K  I A+ K LA +  +YG+R
Sbjct: 128 KYA----LPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVR 183

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFL--SEMGNLRGQVLNAEGIANAALYLATDEASD 233
           VNC+SP  + + +    +       A +   E+  L G++        AAL+LA  EA+ 
Sbjct: 184 VNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAA-EATF 242

Query: 234 VTGLNLVVDGG 244
            TG++L++ GG
Sbjct: 243 CTGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score =  121 bits (304), Expect = 9e-33
 Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 9/249 (3%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVTSED 62
           + A++TG A GIG A A+ F   G +V+  D+      A A  LG+     + CD+T   
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            +   +  A A+ G +D++  NAG   R  AS+ DT  +      A+N    +L  +   
Sbjct: 63  SLAAALANAAAERGPVDVLVANAGAA-RA-ASLHDTTPASWRADNALNLEAAYLCVEAVL 120

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
             M+ + +G ++   S    +A +G PAY+ +K G+I   K+LA E  ++G+R N V+P 
Sbjct: 121 EGMLKRSRGAVVNIGSV-NGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAP- 178

Query: 183 GLV--SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           G V      +R + NP + E  L +   L+      + +ANA L+LA+  A  +TG+ L 
Sbjct: 179 GTVKTQAWEARVAANPQVFEE-LKKWYPLQ-DFATPDDVANAVLFLASPAARAITGVCLP 236

Query: 241 VDGGFSVAN 249
           VDGG +  N
Sbjct: 237 VDGGLTAGN 245

Length = 257

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 1e-32
 Identities = 87/252 (34%), Positives = 132/252 (52%), Gaps = 13/252 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L GK A+ITG ++GIG   A  + E GA+V IA    +  + LA ++   G  V  + CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+   ++T+++D   A+ G +DI   NAGI+      +LD P  +  R+   N TG FL 
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIIT--VTPMLDMPLEEFQRLQNTNVTGVFLT 124

Query: 118 AKHAARVMIPQHK-GCILFTASACTEIAGIGSPA--YTVSKYGIIALVKILAAELRQYGL 174
           A+ AA+ M+ Q + G I+ TAS    I  +      Y  SK  +I L K +A EL  + +
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVN VSP     G      + P      L E     G++   E +A   LYLA++ +S +
Sbjct: 185 RVNSVSP-----GYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYM 239

Query: 235 TGLNLVVDGGFS 246
           TG ++V+DGG++
Sbjct: 240 TGSDIVIDGGYT 251

Length = 253

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 2e-32
 Identities = 70/245 (28%), Positives = 104/245 (42%), Gaps = 15/245 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
           L+GKV  ITGG  G+G A A      GA+V +       L Q L     + +     D+ 
Sbjct: 5   LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLV 64

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
                   VD    ++G+LD + N AG    G  ++ D      DR+  VN       +K
Sbjct: 65  DPQAARRAVDEVNRQFGRLDALVNIAGAFVWG--TIADGDADTWDRMYGVNVKTTLNASK 122

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A   +     G I+   +     AG G  AY  +K G+  L + LAAEL   G+ VN V
Sbjct: 123 AALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAV 182

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
            P  ++    +R  +  A    +++            E IA    +L +DEA  +TG ++
Sbjct: 183 LP-SIIDTPPNRADMPDADFSRWVT-----------PEQIAAVIAFLLSDEAQAITGASI 230

Query: 240 VVDGG 244
            VDGG
Sbjct: 231 PVDGG 235

Length = 239

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score =  119 bits (300), Expect = 3e-32
 Identities = 72/261 (27%), Positives = 116/261 (44%), Gaps = 40/261 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            +G+V ++TG   G+G A A  F E GAKVV+ D+  +   +       D       V  
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAAD------KVVD 56

Query: 61  E------------DEITN---LVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLD 104
           E            D + +   +V TA+  +G++DI+ NNAGI+ DR FA + +    D D
Sbjct: 57  EIKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSE---EDWD 113

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
            V+ V+  G F   + A   M  Q  G I+ T+SA       G   Y+ +K G++ L   
Sbjct: 114 LVMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNT 173

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
           LA E  +Y +  N ++P       ++ + +   ++   L +        L  E +A   L
Sbjct: 174 LAIEGAKYNITCNTIAP-------AAGSRMTETVMPEDLFDA-------LKPEYVAPLVL 219

Query: 225 YLATDEASDVTGLNLVVDGGF 245
           YL  +   +VTG    V  G+
Sbjct: 220 YLCHES-CEVTGGLFEVGAGW 239

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 4e-32
 Identities = 78/254 (30%), Positives = 116/254 (45%), Gaps = 18/254 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-------GEDVCY 53
           L+ +  +ITGG+ G+G A A     +GA V++ D+    G+A A  +       G     
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTT 112
           +  DV         +D  V ++G+LDI+ NNAGI  D  FA +      + D V+ VN  
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSI---EEWDDVIDVNLD 120

Query: 113 GGFLGAKHAARVMI-PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
           G F   + A   MI  +  G I+  AS        G   Y  SK G+I L K LA EL  
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAP 180

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
            G+ VN V+P  + + ++   +    +L           G+    + +A    +L +D A
Sbjct: 181 RGITVNAVAPGAINTPMADNAAPTEHLLNPVPV---QRLGE---PDEVAALVAFLVSDAA 234

Query: 232 SDVTGLNLVVDGGF 245
           S VTG  + VDGGF
Sbjct: 235 SYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  119 bits (299), Expect = 4e-32
 Identities = 79/247 (31%), Positives = 123/247 (49%), Gaps = 6/247 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVT 59
           LEGKVA++TG  +G+G   A    E GA +V A   + +  Q     LG     +  D++
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLS 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             + I  LVD+AV ++G +DI+ NNAGI+ R  A   +  + D D V+ VN    F   +
Sbjct: 63  DIEAIKALVDSAVEEFGHIDILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 120 HAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
            AA+  + Q   G I+  AS  +   GI  P+YT SK+ +  L K+LA E    G+ VN 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           ++P  + +  +     +     A L  +    G+    + I   A++LA+  +  V G  
Sbjct: 181 IAPGYMATNNTQALRADEDRNAAILERIP--AGRWGTPDDIGGPAVFLASSASDYVNGYT 238

Query: 239 LVVDGGF 245
           L VDGG+
Sbjct: 239 LAVDGGW 245

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  119 bits (299), Expect = 4e-32
 Identities = 70/258 (27%), Positives = 122/258 (47%), Gaps = 16/258 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L GK A++TG ASGIG   A      GA V IAD+  +   A+A    K G     +  D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT+ED +   +D    ++G +DI+ +NAGI  +    + +   +D  ++ A++  G FL 
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVSNAGI--QIVNPIENYSFADWKKMQAIHVDGAFLT 122

Query: 118 AKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            K A + M    + G +++  S  +  A     AY  +K+G++ L ++LA E  ++ +R 
Sbjct: 123 TKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRS 182

Query: 177 NCVSPYGLV---------SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           + V P G V            +    I+   +   +     + G     E +A   L+L+
Sbjct: 183 HVVCP-GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLS 241

Query: 228 TDEASDVTGLNLVVDGGF 245
           +  ++ +TG + VV  G+
Sbjct: 242 SFPSAALTGQSFVVSHGW 259

Length = 262

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  118 bits (297), Expect = 6e-32
 Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 9/186 (4%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALAC------KLGEDVCYIH 55
           GK  +ITGG+SGIG A AK   + GA V+I A  +  L +A+          G+ V YI 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++  +E+      AV K G  D++ N AGI   G     D    + +R + VN  G  
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGL--FEDLTAEEFERGMDVNYFGSL 118

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             A     +M  Q  G I+F +S    +   G  AY  SK+ +  L + L  EL+ Y +R
Sbjct: 119 NVAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIR 178

Query: 176 VNCVSP 181
           V+ V P
Sbjct: 179 VSVVYP 184

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  117 bits (295), Expect = 2e-31
 Identities = 74/268 (27%), Positives = 120/268 (44%), Gaps = 25/268 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ KVA+ITGG   +G A A+   + GAKV         G  +A ++   G     +  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAG------IVDRGFA------SVLDTPKSDLDR 105
           V     +    +  VA++G +DI+ N AG        D          +  D  +   + 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           V  +N  G FL ++   + M+ Q  G I+  +S          PAY+ +K  +    + L
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWL 182

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL------RGQVLNAEGI 219
           A E    G+RVN ++P   V+  + +  INP   +   ++  N        G+    E +
Sbjct: 183 AVEFATTGVRVNAIAPGFFVTPQNRKLLINP---DGSYTDRSNKILGRTPMGRFGKPEEL 239

Query: 220 ANAALYLATDEASD-VTGLNLVVDGGFS 246
             A L+LA+++AS  VTG+ + VDGGFS
Sbjct: 240 LGALLFLASEKASSFVTGVVIPVDGGFS 267

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  115 bits (291), Expect = 6e-31
 Identities = 77/251 (30%), Positives = 107/251 (42%), Gaps = 17/251 (6%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC---DVTSED 62
            ++TG A GIG A A+   E GA+V   D        L   L            DV    
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            +  +V     +YG +D++ N AGI+  G  ++      D     AVNT G F  ++  +
Sbjct: 61  AVDEVVQRLEREYGPIDVLVNVAGILRLG--AIDSLSDEDWQATFAVNTFGVFNVSQAVS 118

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP- 181
             M  +  G I+   S    +  +G  AY  SK  +  L K L  EL  YG+R N VSP 
Sbjct: 119 PRMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPG 178

Query: 182 -------YGL-VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
                    L       +  I     E F   +G   G++     IANA L+LA+D AS 
Sbjct: 179 STDTEMQRQLWNDEYGEQQVIA-GSPEQF--RLGIPLGKIAEPSDIANAVLFLASDLASH 235

Query: 234 VTGLNLVVDGG 244
           +T  +LVVDGG
Sbjct: 236 ITMHDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 7e-31
 Identities = 72/254 (28%), Positives = 116/254 (45%), Gaps = 20/254 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED---VCYIHCD 57
            + KVAI+TG A GIG A A+     GA VV+AD+     + +A ++  D      +  D
Sbjct: 4   FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           V+  D    + D  V+ +G +D + NNA I        ++  P     + ++VN  G  +
Sbjct: 64  VSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALV 123

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             +   + M  +  G I+  +S     A + S  Y ++K G+  L + LA EL    +RV
Sbjct: 124 CTRAVYKHMAKRGGGAIVNQSSTA---AWLYSNFYGLAKVGLNGLTQQLARELGGMNIRV 180

Query: 177 NCVSPYGLVSGISSRNS-----INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           N ++P G +   ++R       +   +    LS MG         E +    L+L +DEA
Sbjct: 181 NAIAP-GPIDTEATRTVTPKEFVADMVKGIPLSRMG-------TPEDLVGMCLFLLSDEA 232

Query: 232 SDVTGLNLVVDGGF 245
           S +TG    VDGG 
Sbjct: 233 SWITGQIFNVDGGQ 246

Length = 250

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  115 bits (289), Expect = 1e-30
 Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 10/203 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           KV +ITG +SGIG A A      G +V+      +  ++L   L +++  +  DVT E+ 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGELLNDNLEVLELDVTDEES 60

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA----K 119
           I   V   + ++G++D++ NNAG     F  + +T   ++  +  VN      G     +
Sbjct: 61  IKAAVKEVIERFGRIDVLVNNAGYG--LFGPLEETSIEEVRELFEVN----VFGPLRVTR 114

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
               +M  Q  G I+  +S    +       Y  SK  + AL + L  EL  +G++V  +
Sbjct: 115 AFLPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTII 174

Query: 180 SPYGLVSGISSRNSINPAILEAF 202
            P  + +G +   + +       
Sbjct: 175 EPGPVRTGFADNAAGSALEDPEI 197

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score =  115 bits (291), Expect = 1e-30
 Identities = 80/263 (30%), Positives = 124/263 (47%), Gaps = 29/263 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKLGEDVC-YIHC-- 56
           L+G+V I+TG   GIG A A  F   GA+VV+ D+     G A      + V   I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 57  --------DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVL 107
                   D+   D   NLVD AV  +G LD++ NNAGI+ DR  A+     + + D V+
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIAN---MSEEEWDAVI 120

Query: 108 AVNTTGGFLGAKHAARVMIPQHK------GCILFTASACTEIAGIGSPAYTVSKYGIIAL 161
           AV+  G F   +HAA     + K        I+ T+S       +G   Y+ +K GI AL
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAAL 180

Query: 162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN 221
             + AAEL +YG+ VN ++P       ++R  +   +    +++        +  E ++ 
Sbjct: 181 TLVAAAELGRYGVTVNAIAP-------AARTRMTETVFAEMMAKPEEGEFDAMAPENVSP 233

Query: 222 AALYLATDEASDVTGLNLVVDGG 244
             ++L + E+ DVTG    V+GG
Sbjct: 234 LVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  114 bits (288), Expect = 2e-30
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 35/205 (17%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA------------------------DVQ 36
           L GKVA +TG + GIG A A    + GA VV+A                        +++
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 37  DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL 96
              GQAL             DV  ED++  LV+  V ++G+LDI+ NNAG +    + V 
Sbjct: 61  AAGGQALPIV---------VDVRDEDQVRALVEATVDQFGRLDILVNNAGAIW--LSLVE 109

Query: 97  DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY 156
           DTP    D +  VN  G +L ++ A   M+   +G IL  +   +     G  AY   K 
Sbjct: 110 DTPAKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKA 169

Query: 157 GIIALVKILAAELRQYGLRVNCVSP 181
           G+  L   LAAELR++G+ VN + P
Sbjct: 170 GMSRLTLGLAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 2e-30
 Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 51/265 (19%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-QALACKLGEDVCYIHCDVT 59
           L G+V ++TGG  GIGA  A+ F   GA VV+       G +A     G    +   DV 
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHAADVR 57

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLG 117
             D++  LVD  V ++G+LD++ NNAG    G  +A   +      ++++ +N     L 
Sbjct: 58  DPDQVAALVDAIVERHGRLDVLVNNAG----GSPYALAAEASPRFHEKIVELNLLAPLLV 113

Query: 118 AKHAARVMIPQHK-GCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQY 172
           A+ A  VM  Q   G I+   S    ++G     G+ AY  +K G++ L + LA E   +
Sbjct: 114 AQAANAVMQQQPGGGSIVNIGS----VSGRRPSPGTAAYGAAKAGLLNLTRSLAVE---W 166

Query: 173 G--LRVNCVSP-----------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGI 219
              +RVN V             YG   GI++  +  P              G++     I
Sbjct: 167 APKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL-------------GRLATPADI 213

Query: 220 ANAALYLATDEASDVTGLNLVVDGG 244
           A A L+LA+D AS V+G NL V GG
Sbjct: 214 AWACLFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  114 bits (288), Expect = 2e-30
 Identities = 78/253 (30%), Positives = 128/253 (50%), Gaps = 12/253 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE-----DVCYIHCDV 58
           KV +ITGG SG+G A A    + GAK+ + D+ +   +A    L E     +V  I  DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           + E ++   VD  V ++G++D  +NNAGI  +      D    + D+V+++N  G F G 
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQ-NLTEDFGADEFDKVVSINLRGVFYGL 122

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVN 177
           +   +VM  Q  G I+ TAS    I G+G+ + Y  +K+G++ L +  A E  QYG+R+N
Sbjct: 123 EKVLKVMREQGSGMIVNTASV-GGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRIN 181

Query: 178 CVSPYGLVSGI--SSRNSINPAILEAFLSEMG--NLRGQVLNAEGIANAALYLATDEASD 233
            ++P  +++ +   S   + P   E    E    N   +    E +A    +L +D+A  
Sbjct: 182 AIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAGY 241

Query: 234 VTGLNLVVDGGFS 246
           V    + +DGG S
Sbjct: 242 VNAAVVPIDGGQS 254

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  114 bits (287), Expect = 3e-30
 Identities = 80/260 (30%), Positives = 128/260 (49%), Gaps = 29/260 (11%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTS 60
           KVA++TGGA GIG   A+   ++G  V +AD+ +   +  A ++   G        DV+ 
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +D++ + +D A  K+G  D+M NNAG+       +L+  + +L +V  VN  G   G + 
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAP--ITPILEITEEELKKVYNVNVKGVLFGIQA 118

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGI-GSP---AYTVSKYGIIALVKILAAELRQYGLR 175
           AAR    Q H G I+  AS    IAG  G+P   AY+ +K+ +  L +  A EL   G+ 
Sbjct: 119 AARQFKKQGHGGKIINAAS----IAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGIT 174

Query: 176 VNCVSPYGLVSGISSRNSINPAILE-----------AFLSEMGNLRGQVLNAEGIANAAL 224
           VN   P G+V        I+    E            F SE+    G+    E +A    
Sbjct: 175 VNAYCP-GIV-KTPMWEEIDEETSEIAGKPIGEGFEEFSSEIA--LGRPSEPEDVAGLVS 230

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +LA++++  +TG +++VDGG
Sbjct: 231 FLASEDSDYITGQSILVDGG 250

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  113 bits (285), Expect = 4e-30
 Identities = 82/245 (33%), Positives = 124/245 (50%), Gaps = 11/245 (4%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC---KLGEDVCYIHCDVTSE 61
           VAI+TGGA+GIG A A    + GA VVIAD++    +A+A    + G     + C+VTSE
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP--KSDLDRVLAVNTTGGFLGAK 119
            ++  +V   V+++G + I+ NNAG    G     D P  + D +    +N    F  ++
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAG---GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQ 117

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
             A  M     G IL  +S  +E   +   AY  SK  +  + + LA +L   G+RVN V
Sbjct: 118 LCAPHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAV 177

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P G V   +  + + P I  A L       G++   E IANAAL+L +  ++ V+G  L
Sbjct: 178 AP-GAVKTDALASVLTPEIERAMLKH--TPLGRLGEPEDIANAALFLCSPASAWVSGQVL 234

Query: 240 VVDGG 244
            V GG
Sbjct: 235 TVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  113 bits (286), Expect = 5e-30
 Identities = 79/256 (30%), Positives = 109/256 (42%), Gaps = 26/256 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKLGEDVCYIHCDV 58
             GK   +TG A GIG A A  F E GAKV+  D           A            DV
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQEDYPFAT--------FVLDV 57

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           +    +  +    +A+ G LD++ N AGI+  G  +       D  +  AVN  G F   
Sbjct: 58  SDAAAVAQVCQRLLAETGPLDVLVNAAGILRMG--ATDSLSDEDWQQTFAVNAGGAFNLF 115

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +        Q  G I+   S    +  IG  AY  SK  + +L K +  EL  YG+R N 
Sbjct: 116 RAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNV 175

Query: 179 VSPYG----------LVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           VSP G           V     +  I     E F  ++G   G++   + IANA L+LA+
Sbjct: 176 VSP-GSTDTDMQRTLWVDEDGEQQVIA-GFPEQF--KLGIPLGKIARPQEIANAVLFLAS 231

Query: 229 DEASDVTGLNLVVDGG 244
           D AS +T  ++VVDGG
Sbjct: 232 DLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  113 bits (283), Expect = 1e-29
 Identities = 79/249 (31%), Positives = 127/249 (51%), Gaps = 10/249 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKLGEDVCYIH--CD 57
           L  KVA++T    GIG A A+   ++GA VV++   Q N+ +A+A   GE +      C 
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCH 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V   ++   LV TAV  +G +DI+ +NA  V+  F ++LD+ +   D++L VN     L 
Sbjct: 68  VGKAEDRERLVATAVNLHGGVDILVSNAA-VNPFFGNILDSTEEVWDKILDVNVKATALM 126

Query: 118 AKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            K     M  +  G ++  +S  A     G+G   Y VSK  ++ L K LA EL    +R
Sbjct: 127 TKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGP--YNVSKTALLGLTKNLAPELAPRNIR 184

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VNC++P  + +  SS   ++ A+ E+    +   R  +   E  A    +L +++AS +T
Sbjct: 185 VNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRR--LGQPEDCAGIVSFLCSEDASYIT 242

Query: 236 GLNLVVDGG 244
           G  +VV GG
Sbjct: 243 GETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 1e-29
 Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 9/179 (5%)

Query: 8   ITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE---DVCYIHCDVTSEDEI 64
           ITG ASG+G A A  +   G ++ +ADV +  G+     L E   D  Y  CDV    ++
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
           T L      K+G +D++ NNAG+   GF    +    D D  +A+N  G   G K    +
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGVASGGF--FEELSLEDWDWQIAINLMGVVKGCKAFLPL 122

Query: 125 MIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
              Q  G I+  AS     +   + S  Y V+K G++AL + L  EL    + V+ V P
Sbjct: 123 FKRQKSGRIVNIASMAGLMQGPAMSS--YNVAKAGVVALSETLLVELADDEIGVHVVCP 179

Length = 270

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 1e-29
 Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 7/184 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALA-CKLGEDVCYIHCDV 58
           L+GKVA+ITGG+ GIG A A+     G KV I A  Q  L +A A      +V  +  DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLG 117
             E ++   VD  VA +G LD++  NAG+   G FA V +    +   V+  N TG F  
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGV---GHFAPVEELTPEEWRLVIDTNLTGAFYT 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K A   +  +  G I+  +S        G  AY  SK+G++   +    +LRQYG++V+
Sbjct: 121 IKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179

Query: 178 CVSP 181
            + P
Sbjct: 180 TIMP 183

Length = 237

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 2e-29
 Identities = 62/181 (34%), Positives = 88/181 (48%), Gaps = 11/181 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDV 58
           L GKV ++TG A GIGA  A+  H  GAK+ + D+++    ALA +LG D  V  +  DV
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADV 66

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T    +    + AV ++G +D++  NAGI   G  SV         RV+ VN  G F   
Sbjct: 67  TDLAAMQAAAEEAVERFGGIDVVVANAGIASGG--SVAQVDPDAFRRVIDVNLLGVF--- 121

Query: 119 KHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            H  R  +P     +G +L  +S     A  G  AY  SK G+ A    L  E+  +G+ 
Sbjct: 122 -HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVT 180

Query: 176 V 176
           V
Sbjct: 181 V 181

Length = 296

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 3e-29
 Identities = 75/257 (29%), Positives = 128/257 (49%), Gaps = 21/257 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALAC--KLGEDVCYIHCD 57
           L+GK+A+ITG + GIG A AK + + GA +V  D+ Q+ + + LA   +LG +     CD
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCD 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT ED +  +V     + G +DI+ NNAGI+ R    +L+    D  +V+ ++    F+ 
Sbjct: 68  VTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIV 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           +K     MI +  G I+   S  +E+      AY  +K G+  L K +A+E  +  ++ N
Sbjct: 126 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 185

Query: 178 CV----------SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
            +          +P   +    SR+  +  I+    +       +  + E +A  A++LA
Sbjct: 186 GIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA------ARWGDPEDLAGPAVFLA 239

Query: 228 TDEASDVTGLNLVVDGG 244
           +D ++ V G  L VDGG
Sbjct: 240 SDASNFVNGHILYVDGG 256

Length = 265

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  111 bits (281), Expect = 4e-29
 Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 42/277 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+GKVA+ITGG   +G A AK     GAKV I D      +A+  ++   G +   +  D
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAG-------------IVDRGFASVLDTPKSDLD 104
           V  ++ +       +  +G  DI+ N AG              +     +  D  +   +
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFE 127

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALV 162
            V  +N  G  L  +  A+ M+ +  G I+  +S  A T +  +  PAY+ +K  I    
Sbjct: 128 FVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKV--PAYSAAKAAISNFT 185

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL--RGQ-VLN---- 215
           + LA    + G+RVN ++P   ++        N A+L    +E G+L  R   +L     
Sbjct: 186 QWLAVHFAKVGIRVNAIAPGFFLT------EQNRALL---FNEDGSLTERANKILAHTPM 236

Query: 216 -----AEGIANAALYLATDEASD-VTGLNLVVDGGFS 246
                 E +    L+LA ++AS  VTG+ L VDGGFS
Sbjct: 237 GRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGGFS 273

Length = 278

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  111 bits (278), Expect = 4e-29
 Identities = 87/248 (35%), Positives = 125/248 (50%), Gaps = 13/248 (5%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
           G+VA++TG A GIG   A      G +VV+AD+    G  +A  LGE+  +I  DV  E 
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEA 69

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
           ++   V   + ++G+LD +  NA I D    ++     +  +RVLAVN TG  L AKH A
Sbjct: 70  QVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCA 129

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
             +   H G I+  AS     +   + AY  SK G++AL   LA  L    +RVN VSP 
Sbjct: 130 PYL-RAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSP- 186

Query: 183 GLVSGISSRNSINPAILEAF-LSEMGNLR---GQVLNAEGIANAALYLATDEASDVTGLN 238
                I +R   +P+   A  LSE  + +   G+V   E +A    +L + +A  VTG  
Sbjct: 187 ---GWIDAR---DPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQE 240

Query: 239 LVVDGGFS 246
            VVDGG +
Sbjct: 241 FVVDGGMT 248

Length = 255

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  110 bits (278), Expect = 5e-29
 Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 12/207 (5%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH---CDVTSE 61
           + +ITGG SGIG   A  F + GAKVVI D+ +   +  A  + +    +H   CDV+  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           +E+         + G + I+ NNAG+V  G   +L+ P  ++++   VNT   F   K  
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGVV-SGK-KLLELPDEEIEKTFEVNTLAHFWTTKAF 118

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY---GLRVNC 178
              M+ ++ G I+  AS    I+  G   Y  SK   +   + L  EL+ Y   G++   
Sbjct: 119 LPDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 179 VSPY----GLVSGISSRNSINPAILEA 201
           V PY    G+  G+ +   +   ILE 
Sbjct: 179 VCPYFINTGMFQGVKTPRPLLAPILEP 205

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  110 bits (278), Expect = 5e-29
 Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 22/259 (8%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA--CKLGEDVCYIHCDVT 59
           GKVA++T  +SGIG A A+     GA+V I    ++NL +A +     G  V  +  D+T
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             ++I  LV+ A   +G++DI+ NNAG    G     +    D      +      L   
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPG--PFAELTDEDWLEAFDLK----LLSVI 114

Query: 120 HAAR----VMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              R     M  +  G I+  +S   +          V++ G+I LVK L+ EL   G+ 
Sbjct: 115 RIVRAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVT 174

Query: 176 VNCVSP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           VN V P          L+   + +  I+    E  ++    L G+V   E +A    +LA
Sbjct: 175 VNSVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL-GRVGKPEELAALIAFLA 233

Query: 228 TDEASDVTGLNLVVDGGFS 246
           +++AS +TG  ++VDGG +
Sbjct: 234 SEKASYITGQAILVDGGLT 252

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 7e-29
 Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 7/250 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALAC--KLGEDVCYIHCD 57
           L G+VA++TG A G+G   A+     GA V++       L  A+A     G     +  D
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +  E+ +        A++G+LDI+ NN G  DR    + +   + +  +L  +     L 
Sbjct: 69  IADEEAVAAAFARIDAEHGRLDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILL 126

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++ AA+ M  Q  G I+   S   ++A  G   Y  +K G+  L++ LAAE   +G+  N
Sbjct: 127 SRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSN 186

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P    +  ++  + +PA+   +L++   L G+    E IA AA++LA+  AS V G 
Sbjct: 187 AIAPGYFATETNAAMAADPAV-GPWLAQRTPL-GRWGRPEEIAGAAVFLASPAASYVNGH 244

Query: 238 NLVVDGGFSV 247
            L VDGG+SV
Sbjct: 245 VLAVDGGYSV 254

Length = 256

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  110 bits (278), Expect = 7e-29
 Identities = 82/256 (32%), Positives = 130/256 (50%), Gaps = 20/256 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA-CK-LGEDVCYIHCD 57
           L+ KV +ITGGA G+G A A+   + GAK+ + D+ Q+ L +A+A C  LG +V     +
Sbjct: 3   LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAAN 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLD---TPKSDLDR---VLAVN 110
           VT E+++          +G+L+ + NNAGI+  G      D   T K  L++   V+ VN
Sbjct: 63  VTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVN 122

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
            TG FL  + AA  MI      ++   S+      +G   Y+ SK G+ A+    A EL 
Sbjct: 123 LTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTNYSASKAGVAAMTVTWAKELA 182

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS--EMGNLRGQVLNAEGIANAALYLAT 228
           +YG+RV  ++P G++       ++ P  LE       +G L G+    E IA+   ++  
Sbjct: 183 RYGIRVAAIAP-GVIE-TEMTAAMKPEALERLEKMIPVGRL-GE---PEEIAHTVRFIIE 236

Query: 229 DEASDVTGLNLVVDGG 244
           ++   VTG  L +DGG
Sbjct: 237 NDY--VTGRVLEIDGG 250

Length = 253

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 9e-29
 Identities = 77/250 (30%), Positives = 116/250 (46%), Gaps = 13/250 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L  KVAI+TG + GIGAA A+    +G  V +     A   D L   +    G  +    
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAV-Q 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV     +T L D A   +G++D++ NNAG++     ++ D    D DR +A N  G F
Sbjct: 62  ADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM--PLGTIADFDLEDFDRTIATNLRGAF 119

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           +  + AAR +     G I+  +++   +   G   Y  SK  +  LV +LA ELR  G+ 
Sbjct: 120 VVLREAARHL--GQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGIT 177

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VN V+P G V+     N  +   ++         R  +   E IA A  +LA  + + V 
Sbjct: 178 VNAVAP-GPVATELFFNGKSAEQIDQLAGLAPLER--LGTPEEIAAAVAFLAGPDGAWVN 234

Query: 236 GLNLVVDGGF 245
           G  L V+GGF
Sbjct: 235 GQVLRVNGGF 244

Length = 245

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  109 bits (275), Expect = 1e-28
 Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 18/252 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            +GKVA+ITGG  GIG A A+ F   GAKV +        +A   +  + V  I CDV +
Sbjct: 5   FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE-NEAKELR-EKGVFTIKCDVGN 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D++    +    ++G++D++ NNAGI+        D  K   ++++ +N  G       
Sbjct: 63  RDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEK--YNKMIKINLNGAIYTTYE 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPA-----YTVSKYGIIALVKILAAELRQYGLR 175
              ++     G I+  AS     AGIG+ A     Y ++K GII L + LA EL +YG+R
Sbjct: 121 FLPLLKLSKNGAIVNIASN----AGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIR 176

Query: 176 VNCVSPYGLVSG---ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           VN V+P G V     +S ++      L         L+      E IAN  L+LA+D+A 
Sbjct: 177 VNAVAP-GWVETDMTLSGKSQEEAEKLRELFRNKTVLK-TTGKPEDIANIVLFLASDDAR 234

Query: 233 DVTGLNLVVDGG 244
            +TG  +V DGG
Sbjct: 235 YITGQVIVADGG 246

Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  109 bits (274), Expect = 1e-28
 Identities = 77/232 (33%), Positives = 116/232 (50%), Gaps = 10/232 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+GKVA++TG +SGIG A A+     GA V IA  + +  +ALA +L   G     +  D
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT E ++   V+  V   G+LDI+ NNAGI+  G   V D   +D  R++  N   G + 
Sbjct: 61  VTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG--PVEDADTTDWTRMIDTNLL-GLMY 117

Query: 118 AKHAA-RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             HAA    + ++KG I+  +S    +A   S  Y  +K+G+ A  + L  E+ + G+RV
Sbjct: 118 TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRV 177

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
             + P G V      +  +    EA+   +  +R   L AE IA A  Y  T
Sbjct: 178 VVIEP-GTVDTELRDHITHTITKEAYEERISTIRK--LQAEDIAAAVRYAVT 226

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  109 bits (273), Expect = 2e-28
 Identities = 81/248 (32%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+ A++TG + GIG   A+L H  GA V +   +    +ALA +LGE V     +++ 
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            DE+  L   A A    +DI+ NNAGI   G F  + D    D D VL VN T  F   +
Sbjct: 64  RDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSD---EDWDSVLEVNLTATFRLTR 120

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                M+ +  G I+   S        G   Y  SK G+I   K LA E+    + VNCV
Sbjct: 121 ELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCV 180

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P  + S ++ +  +N    EA +  +   R  +     +A+A  YLA+ EA+ VTG  +
Sbjct: 181 APGFIESAMTGK--LNDKQKEAIMGAIPMKR--MGTGAEVASAVAYLASSEAAYVTGQTI 236

Query: 240 VVDGGFSV 247
            V+GG ++
Sbjct: 237 HVNGGMAM 244

Length = 245

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  108 bits (271), Expect = 5e-28
 Identities = 84/247 (34%), Positives = 122/247 (49%), Gaps = 9/247 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---LGEDVCYIHCD 57
           L+GK AIITG  +GIG   A  F   GA VV++D+  +    +  +   LG       CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +TSE E++ L D A++K GK+DI+ NNAG    G     D P +D  R   +N    F  
Sbjct: 69  ITSEQELSALADFALSKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++  A  M     G IL   S   E   I   +Y  SK     LV+ +A +L +  +RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P G +   + ++ I P I +  L        ++   + IANAAL+L +  AS V+G 
Sbjct: 186 GIAP-GAILTDALKSVITPEIEQKMLQHTP--IRRLGQPQDIANAALFLCSPAASWVSGQ 242

Query: 238 NLVVDGG 244
            L V GG
Sbjct: 243 ILTVSGG 249

Length = 255

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  108 bits (271), Expect = 7e-28
 Identities = 73/271 (26%), Positives = 121/271 (44%), Gaps = 40/271 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-----VCYIH 55
           L+GK  +ITG    IG+A  K   E G  V+ AD+       L   LG++     +  + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASV-----LDTPKSDLDRVLAVN 110
            D+T ++ +   +  +  KYGK+D   N A   ++ +        LD    +L   L   
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG-- 119

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA--------------YTVSKY 156
               FL ++  A+    Q  G ++  +S    I G+ +P               Y   K 
Sbjct: 120 --SSFLFSQQFAKYFKKQGGGNLVNISS----IYGVVAPKFEIYEGTSMTSPVEYAAIKA 173

Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNA 216
           GII L K LA   +   +RVNCVSP G++      ++   A L A+       +G +L+ 
Sbjct: 174 GIIHLTKYLAKYFKDSNIRVNCVSPGGIL------DNQPEAFLNAYKKCCNG-KG-MLDP 225

Query: 217 EGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           + I    ++L +D++  +TG N++VD GFS+
Sbjct: 226 DDICGTLVFLLSDQSKYITGQNIIVDDGFSL 256

Length = 256

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  108 bits (271), Expect = 8e-28
 Identities = 59/229 (25%), Positives = 100/229 (43%), Gaps = 14/229 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHC 56
           ++GK A+ITG +SGIGA  AK     G  +++     D  + L + L  K G +V  I  
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPA 63

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D++  + +  L D    + G +D++ NNAG    G    L+    + + ++ +N      
Sbjct: 64  DLSDPEALERLEDELKERGGPIDVLVNNAGFGTFG--PFLELSLDEEEEMIQLNILALTR 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             K     M+ +  G I+   SA   I       Y+ +K  +++  + L  EL+  G++V
Sbjct: 122 LTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKV 181

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
             V P    +             + +L   G L   VL+ E +A AAL 
Sbjct: 182 TAVCPGPTRTEFFDA-----KGSDVYLLSPGEL---VLSPEDVAEAALK 222

Length = 265

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  107 bits (270), Expect = 9e-28
 Identities = 90/260 (34%), Positives = 126/260 (48%), Gaps = 18/260 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+G+V ++TGGASG+G A    F   GA+V + D      Q L    G+ V  +  DV S
Sbjct: 3   LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL----DRVLAVNTTGGFL 116
            D+    V   VA +GK+D +  NAGI D   A V D P   +    D V  +N  G  L
Sbjct: 63  LDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALV-DIPDDRIDEAFDEVFHINVKGYLL 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             K AA   +   +G ++FT S        G P YT +K+ ++ LVK LA EL  Y +RV
Sbjct: 122 AVK-AALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRV 179

Query: 177 NCVSPYGLVS---GISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLAT 228
           N V+P G+ S   G  S    + +I    L +M  L+     G++ +AE    A ++ AT
Sbjct: 180 NGVAPGGMSSDLRGPKSLGMADKSISTVPLGDM--LKSVLPIGRMPDAEEYTGAYVFFAT 237

Query: 229 -DEASDVTGLNLVVDGGFSV 247
             +    TG  L  DGG  V
Sbjct: 238 RGDTVPATGAVLNYDGGMGV 257

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 1e-27
 Identities = 80/251 (31%), Positives = 125/251 (49%), Gaps = 14/251 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVT 59
           L GKVAIITG  +G+G   A    + GA +V   V +    QA    LG    +I  D+ 
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            + +I ++V  AV   G +DI+ NNAGI+ R    +L+    D D V+ +N    F  ++
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQ 123

Query: 120 HAARVMIPQHKGC-ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             A+  + Q  G  I+  AS  +   GI  P+YT SK  ++ L + LA EL QY + VN 
Sbjct: 124 AVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNA 183

Query: 179 VSPYGLVS----GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           ++P  + +     + +  + N AILE   +            + +A  A++L++  +  V
Sbjct: 184 IAPGYMATDNTAALRADTARNEAILERIPASRWGT------PDDLAGPAIFLSSSASDYV 237

Query: 235 TGLNLVVDGGF 245
           TG  L VDGG+
Sbjct: 238 TGYTLAVDGGW 248

Length = 251

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  107 bits (268), Expect = 1e-27
 Identities = 63/258 (24%), Positives = 117/258 (45%), Gaps = 19/258 (7%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----DNLGQALACKLGEDVCYIHCD 57
             +VA++ GG   +G        E G  V +AD+     + +   +  + GE       D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
            T+E  +  L       + ++D++  +AGI      +  D    D DR L VN  G FL 
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKIT--DFELGDFDRSLQVNLVGYFLC 118

Query: 118 AKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           A+  +++MI    +G I+   S   ++    +  Y+ +K+G + L + LA +L ++G+ V
Sbjct: 119 AREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITV 178

Query: 177 NCV-------SPY--GLVSGISSRNSINPAILEAFLSEMGNL-RGQVLNAEGIANAALYL 226
           N +       SP    L+   + +  I  + +E +  +   L RG   + + + N  L+ 
Sbjct: 179 NSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRG--CDYQDVLNMLLFY 236

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+ +AS  TG ++ + GG
Sbjct: 237 ASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  107 bits (269), Expect = 2e-27
 Identities = 77/265 (29%), Positives = 121/265 (45%), Gaps = 39/265 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI---ADVQDNLGQALACKLGEDVCYIHCD 57
           L+ KV I+TGGASGIGAA +    E GA  VI   +   D   + L   L     ++  D
Sbjct: 5   LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELR-ALQPRAEFVQVD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASV-LDTPKSDLDRVLAVNTTGGFL 116
           +T + +  + V+  VAK+G++D + NNAG+ D     V L+  +      L  N    ++
Sbjct: 64  LTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND----GVGLEAGREAFVASLERNLIHYYV 119

Query: 117 GAKHAARVMIP---QHKGCILFTASACTEIAGIG-SPAYTVSKYGIIALVKILAAELRQY 172
            A +     +P     +G I+  +S  T + G G +  Y  +K   +AL +  A  L + 
Sbjct: 120 MAHYC----LPHLKASRGAIVNISSK-TALTGQGGTSGYAAAKGAQLALTREWAVALAKD 174

Query: 173 GLRVNCVSP-------Y-----GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA 220
           G+RVN V P       Y           +   +I   I          L  ++  AE IA
Sbjct: 175 GVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKI---------PLGHRMTTAEEIA 225

Query: 221 NAALYLATDEASDVTGLNLVVDGGF 245
           + A++L ++ +S  TG  L VDGG+
Sbjct: 226 DTAVFLLSERSSHTTGQWLFVDGGY 250

Length = 258

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  106 bits (266), Expect = 3e-27
 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 23/257 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKLGEDVCYIHCDVT 59
           +  +  ++TGG+ G+GAA A+ F   GA+VV+   Q ++  +ALA +LG+    +  DVT
Sbjct: 3   ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVT 62

Query: 60  SEDEITNLVDTAVAKYGK-LDIMYNNAGIVDRGFASVLDTPKSDLD-RVLAVNTTGGFLG 117
             +++  +  TA   +GK +  + NNA + D  F         D+          G   G
Sbjct: 63  DREQVQAMFATATEHFGKPITTVVNNA-LADFSFDGDARKKADDITWEDFQQQLEGSVKG 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGS-----PA-----YTVSKYGIIALVKILAA 167
           A +  +  +P               I  IG+     P      YT +K  ++ L + LAA
Sbjct: 122 ALNTIQAALPG------MREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAA 175

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           EL  YG+ VN VS  GL+    +  +    + +  L        +V   +  A+A L+ A
Sbjct: 176 ELGPYGITVNMVSG-GLLRTTDASAATPDEVFD--LIAATTPLRKVTTPQEFADAVLFFA 232

Query: 228 TDEASDVTGLNLVVDGG 244
           +  A  VTG NLVVDGG
Sbjct: 233 SPWARAVTGQNLVVDGG 249

Length = 253

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  106 bits (265), Expect = 4e-27
 Identities = 81/250 (32%), Positives = 120/250 (48%), Gaps = 14/250 (5%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDV 58
           KV IITG + GIGAA A L  E G  V +      D  + + QA+  + GE +  +  DV
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA-VAADV 61

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             E ++  L +    + G+LD + NNAGI++     +     + L R+ A N  G FL A
Sbjct: 62  ADEADVLRLFEAVDRELGRLDALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCA 120

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPA----YTVSKYGIIALVKILAAELRQYGL 174
           + A + M  +H G      +  +  A +GSP     Y  SK  I  +   LA E+   G+
Sbjct: 121 REAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGI 180

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVN V P  + + I +     P  ++   + +   RG    AE +A A L+L +DEAS  
Sbjct: 181 RVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGG--TAEEVARAILWLLSDEASYT 237

Query: 235 TGLNLVVDGG 244
           TG  + V GG
Sbjct: 238 TGTFIDVSGG 247

Length = 248

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  105 bits (264), Expect = 4e-27
 Identities = 74/254 (29%), Positives = 116/254 (45%), Gaps = 11/254 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ K AI+TGG  GIG A  + F E GAKV + D+     + +A  +   G +     CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +T  D +   V  A    G +D++ NNAG     F     T     +R++A+N TG    
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGW--DKFGPFTKTEPPLWERLIAINLTGALHM 118

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
                  M+ +  G I+  AS    +   G   Y   K G++A  K +A E  ++G+ VN
Sbjct: 119 HHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVN 178

Query: 178 CVSP----YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
            V P      L+  I         + EAF   +    G++   + +  A L+ ++D+AS 
Sbjct: 179 VVCPGPTDTALLDDICGGAENPEKLREAFTRAIP--LGRLGQPDDLPGAILFFSSDDASF 236

Query: 234 VTGLNLVVDGGFSV 247
           +TG  L V GG ++
Sbjct: 237 ITGQVLSVSGGLTM 250

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score =  104 bits (261), Expect = 7e-27
 Identities = 56/178 (31%), Positives = 83/178 (46%), Gaps = 2/178 (1%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           K A++TG + GIG A A+L H  G +V I    +    A A +  E V  +  DV  E +
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELEGVLGLAGDVRDEAD 60

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
           +   VD     +G LD + NNAG+       V +    +   VL  N TG F     AA 
Sbjct: 61  VRRAVDAMEEAFGGLDALVNNAGV--GVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118

Query: 124 VMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            ++ +  G I+   S   + A  G  AY  SK+G++ L +    +LR+  +RV  V P
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMP 176

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  104 bits (262), Expect = 2e-26
 Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 15/197 (7%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----DNLGQALACKLGEDVCYIHCDV 58
           GKV IITG + GIG A A      GA++V+A        +L Q LA   G +   +  DV
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELA-DHGGEALVVPTDV 59

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLG 117
           +  +    L++ AVA++G +DI+ NNAGI     F  + D   S  +RV+ VN    +LG
Sbjct: 60  SDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVN----YLG 113

Query: 118 AKHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           A +     +P     +G I+  +S            Y  SK+ +      L  EL   G+
Sbjct: 114 AVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGV 173

Query: 175 RVNCVSPYGLVSGISSR 191
            V  V P  + + I  R
Sbjct: 174 AVTVVCPGFVATDIRKR 190

Length = 263

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score =  103 bits (259), Expect = 2e-26
 Identities = 76/247 (30%), Positives = 109/247 (44%), Gaps = 16/247 (6%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT 65
            I+TG A GIG A A+   + GA V+  D+   L       L         DV     + 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL----TPLDVADAAAVR 56

Query: 66  NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +    +A++G +D + N AG++  G    L     D ++  AVN TG F   +  A  M
Sbjct: 57  EVCSRLLAEHGPIDALVNCAGVLRPGATDPL--STEDWEQTFAVNVTGVFNLLQAVAPHM 114

Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP---- 181
             +  G I+  AS    +  I   AY  SK  + +L K L  EL  YG+R N VSP    
Sbjct: 115 KDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSPGSTD 174

Query: 182 ----YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
                 L         +   + E F   +G   G++     IANA L+LA+D+A  +T  
Sbjct: 175 TAMQRTLWHDEDGAAQVIAGVPEQF--RLGIPLGKIAQPADIANAVLFLASDQAGHITMH 232

Query: 238 NLVVDGG 244
           +LVVDGG
Sbjct: 233 DLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  104 bits (260), Expect = 2e-26
 Identities = 75/251 (29%), Positives = 122/251 (48%), Gaps = 7/251 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC---D 57
           L G+ A++TG + GIG A A+   + GA+V++         A A  L       H    D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT  D +   +D   A+ G +DI+ NNAG+  R    + D P    +R+L  N +  F  
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYV 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +  AR MI +  G I+  AS  + +A  G   YT +K  +  L K +A +  ++GL+ N
Sbjct: 126 GQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P    + +++    +P    A+L E     G+    E +  A ++LA+D +S V G 
Sbjct: 186 AIAPGYFDTPLNAALVADPE-FSAWL-EKRTPAGRWGKVEELVGACVFLASDASSFVNGH 243

Query: 238 NLVVDGGFSVA 248
            L VDGG + +
Sbjct: 244 VLYVDGGITAS 254

Length = 255

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  103 bits (257), Expect = 4e-26
 Identities = 82/252 (32%), Positives = 127/252 (50%), Gaps = 17/252 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L GKVAI+TGGA GIG A      + GAKVVI      +  +NL   L  K G DV  + 
Sbjct: 4   LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG-KEGHDVYAVQ 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGG 114
            DV+  ++   LV+ AV  +GK+DI+ NNAGI  DR F  +    + D +RV+ VN +  
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWERVIDVNLSSV 119

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           F         +    +G I+  +S   +  G G   Y+ +K G++   K LA EL +  +
Sbjct: 120 FNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASD 233
            VN + P  + + + +   +   + +  ++++   R GQ   A+ IA   +YL  D A  
Sbjct: 180 TVNAICPGFIDTEMVA--EVPEEVRQKIVAKIPKKRFGQ---ADEIAKGVVYLCRDGAY- 233

Query: 234 VTGLNLVVDGGF 245
           +TG  L ++GG 
Sbjct: 234 ITGQQLNINGGL 245

Length = 247

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score =  100 bits (252), Expect = 5e-26
 Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 14/174 (8%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-------ADVQDNLGQALACKLGEDVCYIHC 56
              +ITGG  G+G A A+     GA+ ++       A     L   L   LG +V    C
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEA-LGAEVTVAAC 59

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV   D +  L+    A  G LD + +NAG++D G   + +      +RVLA        
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDG--PLEELTPERFERVLAPK----VT 113

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
           GA +   +      G  +  +S    +   G   Y  +   + AL +   AE  
Sbjct: 114 GAWNLHELTRDLDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score =  103 bits (258), Expect = 8e-26
 Identities = 70/209 (33%), Positives = 112/209 (53%), Gaps = 23/209 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALAC--KLGEDVCYIHCD 57
             GKVA+ITG ASG G A A++    G K+V+ADVQ D L +A+A     G +V  +  D
Sbjct: 4   FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+   ++  L D A+ ++G + +++NNAG+   G   V +   +D + VL VN  G   G
Sbjct: 64  VSDAAQVEALADAALERFGAVHLLFNNAGVGAGGL--VWENSLADWEWVLGVNLWGVIHG 121

Query: 118 AKHAARVMI------PQHKGCILFTASACTEIAGIGSP----AYTVSKYGIIALVKILAA 167
            +    +M+      P ++G I+ TAS    +AG+ +P     Y VSK+ +++L + L  
Sbjct: 122 VRAFTPLMLAAAEKDPAYEGHIVNTAS----MAGLLAPPAMGIYNVSKHAVVSLTETLYQ 177

Query: 168 ELRQYGLRVNC--VSPYGLVSGI--SSRN 192
           +L     +V    + PY + +GI  S RN
Sbjct: 178 DLSLVTDQVGASVLCPYFVPTGIWQSERN 206

Length = 287

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 1e-25
 Identities = 75/253 (29%), Positives = 119/253 (47%), Gaps = 28/253 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALA---CKLGEDVCYIHC 56
           L+GKVA++TGG  G+GAA A+ F E GA  +VI       G+A A     LG    ++  
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D++  ++   +V  A   +G+LD + N AG+ DRG  ++LDT     DR  AVN    F 
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDRG--TILDTSPELFDRHFAVNVRAPFF 121

Query: 117 GAKHAARVMIP-QHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQY 172
             + A ++M   + +G I+   S     A  G P   AY  SK  +  L +  A  L + 
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMS---AHGGQPFLAAYCASKGALATLTRNAAYALLRN 178

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR---------GQVLNAEGIANAA 223
            +RVN ++  G ++           I   F     +           G++L+ + +A A 
Sbjct: 179 RIRVNGLNI-GWMATEGED-----RIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAV 232

Query: 224 LYLATDEASDVTG 236
            +L +DE+  +TG
Sbjct: 233 AFLLSDESGLMTG 245

Length = 260

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 1e-25
 Identities = 64/178 (35%), Positives = 89/178 (50%), Gaps = 8/178 (4%)

Query: 8   ITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH-CDVTSEDEITN 66
           ITG ASGIG A A LF   G +V   D+ +    ALA +LG    +    DVT       
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDA 65

Query: 67  -LVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
            L D A A  G+LD+++NNAGI+  G F  +   P    DRV+ +N  G   GA HAA  
Sbjct: 66  ALADFAAATGGRLDVLFNNAGILRGGPFEDI---PLEAHDRVIDINVKGVLNGA-HAALP 121

Query: 125 MIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            +    G  +   S+ + I G    A Y+ +K+ +  L + L  E R++G+RV  V P
Sbjct: 122 YLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMP 179

Length = 260

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 2e-25
 Identities = 85/266 (31%), Positives = 120/266 (45%), Gaps = 38/266 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA------DVQDNLGQALACKLGEDVCYI 54
           L+GKVA+ITGG SGIG A A LF + GA + I       D  +   +    K G     I
Sbjct: 44  LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET--KQRVEKEGVKCLLI 101

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV+ E    + V+  V + G+LDI+ NNA        S+ D     LD+    N    
Sbjct: 102 PGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSY 160

Query: 115 FLGAKHAARVMIPQHK--GCILFTASACTEIAGI-GSPA---YTVSKYGIIALVKILAAE 168
           F    H  +  +P  K    I+ T S    I G  G+     Y+ +K  I A  + LA  
Sbjct: 161 F----HMTKAALPHLKQGSAIINTGS----ITGYEGNETLIDYSATKGAIHAFTRSLAQS 212

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEA-----FLSEMGNLR-GQVLNAEGIANA 222
           L Q G+RVN V+P G +        + P+  +      F S     R GQ    E +A A
Sbjct: 213 LVQKGIRVNAVAP-GPI-----WTPLIPSDFDEEKVSQFGSNTPMQRPGQ---PEELAPA 263

Query: 223 ALYLATDEASDVTGLNLVVDGGFSVA 248
            ++LA+ ++S +TG  L V+GG  V 
Sbjct: 264 YVFLASPDSSYITGQMLHVNGGVIVN 289

Length = 290

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  100 bits (252), Expect = 3e-25
 Identities = 71/258 (27%), Positives = 105/258 (40%), Gaps = 23/258 (8%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTS 60
           VAI+TG + GIG A A      G  + I D+ D        A     G    Y   D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             +   L+D A   +G+LD + NNAGI  R    +LD  +   DR++A+N  G F   + 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 121 AARVMIPQHK------GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
            AR M+ Q          I+F  S    +       Y +SK G+    ++LA  L   G+
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 175 RVNCVSPYGLVSG---ISSRNSINPAILEAFL--SEMGNLRGQVLNAEGIANAALYLATD 229
            V+ + P GL+        +   +  I    +     G         E IA A   LA+ 
Sbjct: 183 AVHEIRP-GLIHTDMTAPVKEKYDELIAAGLVPIRRWG-------QPEDIAKAVRTLASG 234

Query: 230 EASDVTGLNLVVDGGFSV 247
                TG  + +DGG S+
Sbjct: 235 LLPYSTGQPINIDGGLSM 252

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  100 bits (252), Expect = 3e-25
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 19/220 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHC 56
           L+GKV IITG +SGIG   A      GA++V++  ++   + +  +  E        +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D++  ++   +V+ A+  +G LDI+ NNAGI  R      DT      +++ VN    + 
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGISMRSL--FHDTSIDVDRKIMEVN----YF 114

Query: 117 G----AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           G     K A   +I + +G I+  +S   +I      AY  SK+ +      L AEL + 
Sbjct: 115 GPVALTKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEP 174

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQ 212
            + V  V P GL+      N    A+              
Sbjct: 175 NISVTVVCP-GLI----DTNIAMNALSGDGSMSAKMDDTT 209

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  100 bits (251), Expect = 5e-25
 Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 29/261 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L+G+ A+ITG + GIG A A+ F   GA V+I       +     +        +V  + 
Sbjct: 7   LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLA 66

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV+ +++   ++D     +  L I+ NNAG   R   + +D  + +   +   N    F
Sbjct: 67  ADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAF 124

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA----------YTVSKYGIIALVKIL 165
                 +R   P      L    A + I  IGS +          Y ++K  ++ + + L
Sbjct: 125 ----ELSRYAHP------LLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNL 174

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           A E  + G+RVN V+P+ + + ++S    +P   E  +      R  V   E +A A  +
Sbjct: 175 AVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR--VGEPEEVAAAVAF 232

Query: 226 LATDEASDVTGLNLVVDGGFS 246
           L    AS +TG  + VDGGF 
Sbjct: 233 LCMPAASYITGQCIAVDGGFL 253

Length = 257

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 99.6 bits (248), Expect = 1e-24
 Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 18/253 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV---IADVQDNLGQALACKLGEDVCYIHCD 57
           LEGKVA++TG  +G+G   A    E G  +V   I +  + + Q  A  LG     +  D
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA--LGRRFLSLTAD 65

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +   D I  L++ AVA++G +DI+ NNAG++ R  A  ++  + D D V+ +N    F  
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGLIRREDA--IEFSEKDWDDVMNLNIKSVFFM 123

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           ++ AA+  I Q + G I+  AS  +   GI  P+YT SK G++ + +++A E  ++ + V
Sbjct: 124 SQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINV 183

Query: 177 NCVSPYGLVSG----ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           N ++P  + +     + +    +  IL+   +    L         +    ++LA+  + 
Sbjct: 184 NAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGL------PSDLMGPVVFLASSASD 237

Query: 233 DVTGLNLVVDGGF 245
            + G  + VDGG+
Sbjct: 238 YINGYTIAVDGGW 250

Length = 253

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 98.7 bits (246), Expect = 2e-24
 Identities = 75/262 (28%), Positives = 110/262 (41%), Gaps = 30/262 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE---DVCYIHCD 57
           LEGK A++TGG  GIG A  +     GA+V               +  E    V    CD
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           V+S  E   L+DT  + + GKL+I+ NNAG   R  A   D  + D   +++ N    F 
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEA--KDYTEEDYSLIMSTN----FE 117

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPA----------YTVSKYGIIALVKILA 166
            A H +R+  P      L  AS    I  I S A          Y  +K  +  L + LA
Sbjct: 118 AAYHLSRLAHP------LLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLA 171

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALY 225
            E  +  +RVN V+P+ + + +          L+  +      R G+    E +A    +
Sbjct: 172 CEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGE---PEEVAALVAF 228

Query: 226 LATDEASDVTGLNLVVDGGFSV 247
           L    AS +TG  + VDGG + 
Sbjct: 229 LCMPAASYITGQIIAVDGGLTA 250

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 74/250 (29%), Positives = 113/250 (45%), Gaps = 26/250 (10%)

Query: 10  GGASGIGAAAAKLFHENGAKVVI--ADVQDNLG--QALACKLGEDVCYIHCDVTSEDEIT 65
              + I  A AK   E GA+VV+        +G    LA +L  DV  I  DVTS+++I 
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV--IPLDVTSDEDID 60

Query: 66  NLVDTAVAKYGKLDIMYNNAGIV--DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
            L +      GK+D + ++  +    R     LDT +    + L ++       AK A  
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 124 VMIPQHKGCILFTASACTEIAGIGS----PAYT---VSKYGIIALVKILAAELRQYGLRV 176
           +M            S    ++ I +    P Y    V+K  + +L + LA EL + G+RV
Sbjct: 121 LMNE--------GGSIVA-LSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRV 171

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N +S     +   S       ++E +  EM  L G+  +AE +ANAA +L +D A  +TG
Sbjct: 172 NTISAGPTKTTAGSGIGGFDKMVE-YAEEMAPL-GRNASAEEVANAAAFLLSDLARGITG 229

Query: 237 LNLVVDGGFS 246
             L VDGGFS
Sbjct: 230 QILYVDGGFS 239

Length = 239

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.2 bits (245), Expect = 3e-24
 Identities = 55/188 (29%), Positives = 95/188 (50%), Gaps = 13/188 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKV-VIADVQDNLGQALA--CKLGEDVCYIHCD 57
           L+GK A+ITG   GIG A A    + G  V ++A  ++NL          G  V     D
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATAD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+  +E+T  ++    + G +DI+ NNAGI    F   L+   ++ ++++ VN     +G
Sbjct: 65  VSDYEEVTAAIEQLKNELGSIDILINNAGISK--FGKFLELDPAEWEKIIQVN----LMG 118

Query: 118 AKHAARV----MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
             +A R     MI +  G I+  +S   +     + AY+ SK+G++ L + L  E+R++ 
Sbjct: 119 VYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHN 178

Query: 174 LRVNCVSP 181
           +RV  ++P
Sbjct: 179 IRVTALTP 186

Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 98.1 bits (245), Expect = 3e-24
 Identities = 73/260 (28%), Positives = 117/260 (45%), Gaps = 23/260 (8%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC----KLGEDVCYIHCDVT 59
            VA++TGG  GIG   A+     G  + I D  D+   A        LG +V +   DV 
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
                  ++D A A +G++D + NNAG+  +    +LD      DRVLA+N  G F   +
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 120 HAARVMIPQHK------GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
             A+ M+ Q +        I+F +S    +       Y +SK G+    ++ AA L + G
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEEG 182

Query: 174 LRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           + V  V P GL+     + ++++     A++   L  M    G+    E +A A   LA+
Sbjct: 183 IGVYEVRP-GLIKTDMTAPVTAKYD---ALIAKGLVPMPRW-GE---PEDVARAVAALAS 234

Query: 229 DEASDVTGLNLVVDGGFSVA 248
            +    TG  + VDGG S+ 
Sbjct: 235 GDLPYSTGQAIHVDGGLSIP 254

Length = 256

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 98.5 bits (246), Expect = 3e-24
 Identities = 86/258 (33%), Positives = 119/258 (46%), Gaps = 29/258 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-------DVQDNLGQALACKLGEDVCY 53
           L+GK A+ITGG SGIG A A  F   GA V I        D ++     L  + G     
Sbjct: 24  LKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK--KLIEEEGRKCLL 81

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           I  D+  E    +LV   V ++GKLDI+ NNA        S+ D     L++    N   
Sbjct: 82  IPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQE-SIEDITTEQLEKTFRTNIFS 140

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA---YTVSKYGIIALVKILAAELR 170
            F   K A   +       I+ T S     A  GSP    Y  +K  I+A  + L+ +L 
Sbjct: 141 MFYLTKAALPHLKK--GSSIINTTSV---TAYKGSPHLLDYAATKGAIVAFTRGLSLQLA 195

Query: 171 QYGLRVNCVSPYGLVSG--ISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
           + G+RVN V+P G +    I S  S     +  F S+  MG   GQ   AE +A A ++L
Sbjct: 196 EKGIRVNAVAP-GPIWTPLIPS--SFPEEKVSEFGSQVPMGRA-GQ--PAE-VAPAYVFL 248

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+ ++S VTG  L V+GG
Sbjct: 249 ASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 97.6 bits (243), Expect = 5e-24
 Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 26/261 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH---CD 57
            EGKV ++TG A GIG   A+     GA+V++ D +  L   +  ++       H    D
Sbjct: 2   FEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVD-RSELVHEVLAEILAAGDAAHVHTAD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAG--IVDRGFASV-LDTPKSDLDRVL--AVNTT 112
           + +      +V  AV ++G++D++ NN G  I  + +     +  ++++ R L   +   
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCC 120

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
              L        M+ + +G I+  +S  T   GI    Y+ +K G+ AL   LA E  + 
Sbjct: 121 RAVLPH------MLERQQGVIVNVSSIATR--GIYRIPYSAAKGGVNALTASLAFEHARD 172

Query: 173 GLRVNCVSPYG-------LVSGISSRNSINPAILEAFLSEM--GNLRGQVLNAEGIANAA 223
           G+RVN V+P G       +    +  +       +  + +    +L G+    +    A 
Sbjct: 173 GIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAI 232

Query: 224 LYLATDEASDVTGLNLVVDGG 244
           L+LA+DEAS +TG  L V GG
Sbjct: 233 LFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 97.2 bits (242), Expect = 6e-24
 Identities = 73/250 (29%), Positives = 118/250 (47%), Gaps = 14/250 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALA-CKLGEDVCYIHCDV 58
             GK A++TG   GIG A  K   + GA+VV ++  Q +L   +  C   E VC    D+
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVC---VDL 61

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           +  D      + A+   G +D++ NNA +        L+  K   DR   VN       +
Sbjct: 62  SDWDA----TEEALGSVGPVDLLVNNAAVAI--LQPFLEVTKEAFDRSFDVNVRAVIHVS 115

Query: 119 KHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           +  AR MI +   G I+  +S  ++ A      Y  +K  +  L K++A EL  + +RVN
Sbjct: 116 QIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVN 175

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            V+P  +++ +   N  +P   +  L+ +    G+    E + NA L+L +D++S  TG 
Sbjct: 176 SVNPTVVMTDMGRDNWSDPEKAKKMLNRIP--LGKFAEVEDVVNAILFLLSDKSSMTTGS 233

Query: 238 NLVVDGGFSV 247
            L VDGGF  
Sbjct: 234 TLPVDGGFLA 243

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 96.9 bits (241), Expect = 1e-23
 Identities = 66/189 (34%), Positives = 100/189 (52%), Gaps = 14/189 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGE--DVCYIHCD 57
             G+ A+ITGGASGIG A    F   GA+VV+ DV +  L QA+     E  DV  + CD
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V   +E+T+L D A    G +D++++NAGIV  G   +++    D   V+ V+      G
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGG--PIVEMTHDDWRWVIDVD----LWG 117

Query: 118 AKHAARVMIPQ-----HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           + H     +P+       G ++FTAS    +   G  AY V+KYG++ L + LA E+   
Sbjct: 118 SIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTAD 177

Query: 173 GLRVNCVSP 181
           G+ V+ + P
Sbjct: 178 GIGVSVLCP 186

Length = 275

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 10/183 (5%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH-CDVTSED 62
           K   ITG ASGIG   A LF  NG  V + D+ ++   ALA +LG +       DVT   
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRA 60

Query: 63  EITN-LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
                L D A A  G+LD ++NNAG+   G     D P +  DR++ +N  G   GA +A
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGVGRGGPFE--DVPLAAHDRMVDINVKGVLNGA-YA 117

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQYGLRVNC 178
           A   +    G  +   ++ + I   G P    Y+ +K+ +  L + L  E  ++G+RV  
Sbjct: 118 ALPYLKATPGARVINTASSSAI--YGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVAD 175

Query: 179 VSP 181
           V P
Sbjct: 176 VWP 178

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 96.3 bits (240), Expect = 2e-23
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 28/260 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC-----KLGEDVCYIH 55
             GKVA++TG + GIG A A    E G  + + +   +   A         LG     + 
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAV-NYARSRKAAEETAEEIEALGRKALAVK 60

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGG 114
            +V   ++I  +      ++G+LD+  NNA   V R     ++  +S  D  + +N    
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR---PAMELEESHWDWTMNINAKAL 117

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGS----PAYT---VSKYGIIALVKILAA 167
              A+ AA++M     G I+        ++ +GS      YT   VSK  + AL + LA 
Sbjct: 118 LFCAQEAAKLMEKVGGGKII-------SLSSLGSIRYLENYTTVGVSKAALEALTRYLAV 170

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           EL   G+ VN VS  G V   + ++  N   +LE   ++     G+++  E +ANA L+L
Sbjct: 171 ELAPKGIAVNAVSG-GAVDTDALKHFPNREELLEDARAKT--PAGRMVEPEDVANAVLFL 227

Query: 227 ATDEASDVTGLNLVVDGGFS 246
            + EA  + G  ++VDGG S
Sbjct: 228 CSPEADMIRGQTIIVDGGRS 247

Length = 250

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 95.0 bits (237), Expect = 4e-23
 Identities = 79/256 (30%), Positives = 112/256 (43%), Gaps = 23/256 (8%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHC 56
             KVA+ITGGA  IGAA A+  H  G +V I     A   D L   L          +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP-----KSDLDRVLAVNT 111
           D+   D +  LV   VA +G+LD + NNA       +S   TP     ++  D + A N 
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNA-------SSFYPTPLGSITEAQWDDLFASNL 117

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
              F  +  AA   + + +G I+       E    G P Y  +K  +  L + LA EL  
Sbjct: 118 KAPFFLS-QAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP 176

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
             +RVN V+P G +      NS +    +A L+       ++   E IA A  +L   +A
Sbjct: 177 -EVRVNAVAP-GAILWPEDGNSFDEEARQAILART--PLKRIGTPEDIAEAVRFLL-ADA 231

Query: 232 SDVTGLNLVVDGGFSV 247
           S +TG  L VDGG S+
Sbjct: 232 SFITGQILAVDGGRSL 247

Length = 249

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 94.4 bits (235), Expect = 7e-23
 Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 18/249 (7%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK-----LGEDVCYIHCDV 58
           ++A++TGG  GIG A  +   ++G +V  A+   N  +A A       LG D   +  DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVA-ANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +S +     V    A+ G +D++ NNAGI  D  F  +          V+  N    F  
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM---TYEQWSAVIDTNLNSVFNV 116

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +     M  +  G I+  +S   +    G   Y+ +K G+I   K LA E    G+ VN
Sbjct: 117 TQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVN 176

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            +SP G +       ++   +L + +++  +G L G+    E IA A  +LA++EA  +T
Sbjct: 177 TISP-GYI-ATDMVMAMREDVLNSIVAQIPVGRL-GR---PEEIAAAVAFLASEEAGYIT 230

Query: 236 GLNLVVDGG 244
           G  L ++GG
Sbjct: 231 GATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 94.6 bits (236), Expect = 8e-23
 Identities = 70/258 (27%), Positives = 113/258 (43%), Gaps = 20/258 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALA--CKLGEDVCYIHCD 57
           L+GKV +++G   G+G   A      GA VV+ A   + L +  A    LG     +  D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +T ED+  NLV  A+ ++G++D + NNA         + D    D     AV      LG
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNA-FRVPSMKPLADA---DFAHWRAVIEL-NVLG 117

Query: 118 AKHAARVMIP---QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
                +   P   +  G I+   S     +     AY ++K  ++A  + LA EL   G+
Sbjct: 118 TLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGI 177

Query: 175 RVNCVSP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           RVN V+P         G     + +  +    + A  +   +L+    + E +A+A L+L
Sbjct: 178 RVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDE-VASAVLFL 236

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+D A  +TG  L V+ G
Sbjct: 237 ASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 94.2 bits (235), Expect = 9e-23
 Identities = 69/267 (25%), Positives = 114/267 (42%), Gaps = 41/267 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK A++TGG  GIGAA      E GA+VV         ++    L E V ++  D+T+
Sbjct: 7   LAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDLPEGVEFVAADLTT 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDR---GFASVLDTP-KSDLDRVL--AVNTTGG 114
            +    +    + + G +DI+ +  G       GFA++ D   + +L+  L  AV     
Sbjct: 61  AEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRA 120

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEI-AGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            L        MI +  G I+   S    +     + AY  +K  +    K L+ E+   G
Sbjct: 121 LLPG------MIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKG 174

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG----NLRGQVLNAEG----------- 218
           +RVN VSP      I +  ++  A+ E      G      +  ++++ G           
Sbjct: 175 VRVNTVSP----GWIETEAAV--ALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPE 228

Query: 219 -IANAALYLATDEASDVTGLNLVVDGG 244
            +A    +LA+D A+ +TG   V+DGG
Sbjct: 229 EVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 93.6 bits (233), Expect = 2e-22
 Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 23/259 (8%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDV 58
             KVA++TG   GIG A AK   E+G KV I D  +   QA A KL   G     +  DV
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADV 60

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDT-PKSDLDRVLAVNTTGGFLG 117
           +  D++   V   V  +G L+++ NNAG+      + ++T  +   D+V  +N  G   G
Sbjct: 61  SDRDQVFAAVRQVVDTFGDLNVVVNNAGV---APTTPIETITEEQFDKVYNINVGGVIWG 117

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYG 173
            + A        H G I+   +A ++   +G+P   V   +K+ +  L +  A +L   G
Sbjct: 118 IQAAQEAFKKLGHGGKII---NATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEG 174

Query: 174 LRVNCVSPYGLVS-----GISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALY 225
           + VN  +P G+V       I+ +   N    + +  E        G++   E +AN   +
Sbjct: 175 ITVNAYAP-GIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSF 233

Query: 226 LATDEASDVTGLNLVVDGG 244
           LA  ++  +TG  ++VDGG
Sbjct: 234 LAGPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 96.1 bits (240), Expect = 2e-22
 Identities = 68/198 (34%), Positives = 96/198 (48%), Gaps = 36/198 (18%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV---QDNLGQALACKLGEDVCYIHCD 57
           L GKVA++TG A GIGAA A++   +GA VV  DV    + L  A+A ++G     +  D
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTA--LALD 264

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDR---VLAVN--- 110
           +T+ D    + +    ++G LDI+ +NAGI  D+  A        D  R   VLAVN   
Sbjct: 265 ITAPDAPARIAEHLAERHGGLDIVVHNAGITRDKTLA------NMDEARWDSVLAVNLLA 318

Query: 111 ---TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVK 163
               T   L A            G I+  +S    I+GI    G   Y  SK G+I LV+
Sbjct: 319 PLRITEALLAAGALGD------GGRIVGVSS----ISGIAGNRGQTNYAASKAGVIGLVQ 368

Query: 164 ILAAELRQYGLRVNCVSP 181
            LA  L + G+ +N V+P
Sbjct: 369 ALAPLLAERGITINAVAP 386

Length = 450

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 92.9 bits (231), Expect = 4e-22
 Identities = 70/253 (27%), Positives = 114/253 (45%), Gaps = 9/253 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ +VA++TG   G+GAA A  F E GA V+IA   ++    +A ++   G     +  D
Sbjct: 8   LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAAD 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +   +    L   AV  +G+LDI+ NN G        +L T   DL      N       
Sbjct: 68  LAHPEATAGLAGQAVEAFGRLDIVVNNVG--GTMPNPLLSTSTKDLADAFTFNVATAHAL 125

Query: 118 AKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
              A  +M+     G ++  +S    +AG G  AY  +K  +    ++ A +L    +RV
Sbjct: 126 TVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-IRV 184

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N ++P  +++      + N  +      E      ++ + E IA AA+YLA+   S +TG
Sbjct: 185 NAIAPGSILTSALEVVAANDELRAPM--EKATPLRRLGDPEDIAAAAVYLASPAGSYLTG 242

Query: 237 LNLVVDGGFSVAN 249
             L VDGG +  N
Sbjct: 243 KTLEVDGGLTFPN 255

Length = 263

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 91.5 bits (228), Expect = 5e-22
 Identities = 68/239 (28%), Positives = 94/239 (39%), Gaps = 42/239 (17%)

Query: 4   KVAIITGGASGIGAAAAK-LFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVT 59
           KVA++TG   GIG    + L       V++       GQA   KL   G  V +   DVT
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD---RVLAVNTTGGFL 116
            +  I    D    KYG LDI+ NNAGI         D      +     +  N    F 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGI----AFKGFDDSTPTREQARETMKTN----FF 112

Query: 117 GAKHAARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           G     + ++P       G I+  +S      G  + AY VSK  + AL +ILA EL++ 
Sbjct: 113 GTVDVTQALLPLLKKSPAGRIVNVSS----GLGSLTSAYGVSKAALNALTRILAKELKET 168

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           G++VN   P G V                  ++MG  +      EG A   +YLA    
Sbjct: 169 GIKVNACCP-GWVK-----------------TDMGGGKAPKTPEEG-AETPVYLALLPP 208

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 95.4 bits (238), Expect = 6e-22
 Identities = 66/193 (34%), Positives = 88/193 (45%), Gaps = 13/193 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-----LACKLGEDVCYIH 55
             GK+ ++TG  SGIG   A  F   GA+VV +D+  +   A     L    G       
Sbjct: 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI--DEAAAERTAELIRAAGAVAHAYR 370

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFA-SVLDTPKSDLDRVLAVNTTGG 114
            DV+  D +    +   A++G  DI+ NNAGI   G A   LDT   D DRVL VN  G 
Sbjct: 371 VDVSDADAMEAFAEWVRAEHGVPDIVVNNAGI---GMAGGFLDTSAEDWDRVLDVNLWGV 427

Query: 115 FLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
             G +   R M+ +   G I+  ASA         PAY  SK  ++ L + L AEL   G
Sbjct: 428 IHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAG 487

Query: 174 LRVNCVSPYGLVS 186
           + V  + P G V 
Sbjct: 488 IGVTAICP-GFVD 499

Length = 582

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 91.1 bits (227), Expect = 1e-21
 Identities = 74/261 (28%), Positives = 123/261 (47%), Gaps = 29/261 (11%)

Query: 3   GKVAIITGGAS--GIGAAAAKLFHENGAKVVI---ADVQDNLGQALACKLGEDVCYIHCD 57
           GK  +ITG A+   I    AK  HE GA++      +      + LA +LGE    + CD
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGF 115
           V++++EI  L       +GKLD + ++     +       LDT +    + L ++     
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYS-L 119

Query: 116 LG-AKHAARVMIPQHKGCILFTASACTEIAGIGS----PAY---TVSKYGIIALVKILAA 167
           +  AK A  +M P          S  T ++ +GS    P Y    V+K  + + V+ LA 
Sbjct: 120 VSLAKAALPIMNPG--------GSIVT-LSYLGSERVVPGYNVMGVAKAALESSVRYLAY 170

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRN-SINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           EL + G+RVN +S  G +  +++   +    +LE   SE     G+ + AE + N A +L
Sbjct: 171 ELGRKGIRVNAISA-GPIKTLAASGITGFDKMLE--YSEQRAPLGRNVTAEEVGNTAAFL 227

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
            +D +S +TG  + VDGG+ +
Sbjct: 228 LSDLSSGITGEIIYVDGGYHI 248

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 1e-21
 Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 23/231 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKL---GEDVCYIHCDVT 59
             A+ITG +SGIG A A  F + G  +  +A  QD L +ALA +L   G        D++
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAAAYSIDLS 65

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           + + I   +   + ++G  D++ NNAG+   G   +L+ P SD   V+ +N T  F    
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTG--PLLEMPLSDWQWVIQLNLTSVFQCCS 123

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                M  +  G I+  +S     A     AY VSK  + A  K LA E R +G+RV  +
Sbjct: 124 AVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNL---RGQVLNAEGIANAALYLA 227
           +            ++N  + +   +E       R  +L+ E +A   L+LA
Sbjct: 184 TL----------GAVNTPLWD---TETVQADFDRSAMLSPEQVAQTILHLA 221

Length = 241

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 89.4 bits (222), Expect = 4e-21
 Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 12/247 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHCDVT 59
           K+A++TG   GIG+A A+    +G +V+      N              + V     DVT
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             +E    +     + G +DI+ NNAGI  D  F         + + V+  N    F   
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRDSVF---KRMSHQEWNDVINTNLNSVFNVT 119

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +     M  Q  G I+  +S        G   Y+ +K G+I   K LA+E  +YG+ VNC
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           ++P G +        + P +L++ ++++   R  +   E IA A  +L ++ A  +TG  
Sbjct: 180 IAP-GYI-ATPMVEQMGPEVLQSIVNQIPMKR--LGTPEEIAAAVAFLVSEAAGFITGET 235

Query: 239 LVVDGGF 245
           + ++GG 
Sbjct: 236 ISINGGL 242

Length = 245

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 89.2 bits (222), Expect = 1e-20
 Identities = 73/268 (27%), Positives = 110/268 (41%), Gaps = 53/268 (19%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-------------------DVQDNLGQ 41
           L GK   ITG + GIG A A     +GA +VIA                   +++   GQ
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 42  ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS 101
           AL          +  DV  ED++   V  AV ++G +DI  NNA  ++       DTP  
Sbjct: 64  ALP---------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAIN--LTGTEDTPMK 112

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHKGC----ILFTA---SACTEIAGIGSPAYTVS 154
             D +  +N  G FL ++      +P  K      IL  +   +   +       AYT++
Sbjct: 113 RFDLMQQINVRGTFLVSQAC----LPHLKKSENPHILTLSPPLNLDPKWFA-PHTAYTMA 167

Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL 214
           KYG+      LA E R  G+ VN + P         R +I  A +   L     +R    
Sbjct: 168 KYGMSLCTLGLAEEFRDDGIAVNALWP---------RTTIATAAVRNLLGGDEAMRRS-R 217

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVD 242
             E +A+AA  + +  A + TG N ++D
Sbjct: 218 TPEIMADAAYEILSRPAREFTG-NFLID 244

Length = 273

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 1e-20
 Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 45/274 (16%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI--------ADVQDNLGQALACKLGEDVC 52
           LEG+VA++TGG+SGIG A  +L  E GA V I        A  +  L +      G  + 
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFP---GARLL 62

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL-DTPKSDLDRVLAVNT 111
              CDV  E ++        A++G +D++ NNAG   +G  S   DT        L +  
Sbjct: 63  AARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG---QGRVSTFADTTDDAWRDELELK- 118

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-----P-----AYTVSKYGIIAL 161
              +    +  R  +P         ASA   I  + S     P     A + ++ G++ L
Sbjct: 119 ---YFSVINPTRAFLPL------LRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNL 169

Query: 162 VKILAAELRQYGLRVNCVSPYGLV-SGISSR---NSINPAI-LEAFLSEMGNLRGQVLN- 215
           VK LA EL   G+RVN +   GLV SG   R      +P    EA+ + +   +G  L  
Sbjct: 170 VKSLATELAPKGVRVNSIL-LGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGR 228

Query: 216 ---AEGIANAALYLATDEASDVTGLNLVVDGGFS 246
               +  A A  +LA+  +S  TG ++ V GGF+
Sbjct: 229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGGFA 262

Length = 265

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 87.9 bits (218), Expect = 2e-20
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 9/252 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L GK  +ITG A GIG   A    E GA+++I D+     +    KL   G        +
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFN 66

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT + E+   ++      G +D++ NNAGI  R      + P+ + + V+AVN T  FL 
Sbjct: 67  VTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLV 124

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++  AR M+ +  G I+   S  +E+       Y  SK  +  L + +  EL ++ ++VN
Sbjct: 125 SQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVN 184

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD-VTG 236
            ++P    + ++     + A            R    + + +  AA++L++ +ASD V G
Sbjct: 185 GIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWG--DPQELIGAAVFLSS-KASDFVNG 241

Query: 237 LNLVVDGGFSVA 248
             L VDGG  VA
Sbjct: 242 HLLFVDGGMLVA 253

Length = 254

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 87.2 bits (216), Expect = 3e-20
 Identities = 79/255 (30%), Positives = 112/255 (43%), Gaps = 24/255 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED----VCYIHCDVT 59
           KV +ITG + GIG A A L    G  V I   +D                  C +  DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           +E ++  + D   + +G+LD + NNAGIV      + D   + L R+   N  G +L A+
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 120 HAARVMIPQ---HKGCILFTASACTEIAGIGSPA----YTVSKYGIIALVKILAAELRQY 172
            AAR +        G I+  +S     + +GSP     Y  SK  +  L   LA EL  +
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIA---SRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPH 178

Query: 173 GLRVNCVSPYGLVSGISSRNSINP---AILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
           G+RVN V P GL+      +   P   A L A         G+   A+ +A   ++L +D
Sbjct: 179 GVRVNAVRP-GLIETEIHASGGQPGRAARLGA-----QTPLGRAGEADEVAETIVWLLSD 232

Query: 230 EASDVTGLNLVVDGG 244
            AS VTG  L V GG
Sbjct: 233 AASYVTGALLDVGGG 247

Length = 248

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 87.1 bits (216), Expect = 3e-20
 Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 6/176 (3%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTS 60
           VA + G   G+GAA A+ F   G  V +A       + L   +    G     +  D   
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           EDE+  L D    + G L+++  NAG        +L+T     ++V  +   GGFL A+ 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGANVWF--PILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           AA+ M+ + +G I+FT +  +     G  A+  +K+ + AL + +A EL   G+ V
Sbjct: 119 AAKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 86.7 bits (215), Expect = 4e-20
 Identities = 62/237 (26%), Positives = 94/237 (39%), Gaps = 16/237 (6%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSE 61
           V +ITG +SGIG A A  F E GAKVV+A         LA ++   G +   +  DV   
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
            ++    DTAV ++G++D   NNAG+    F    D    +  RV  VN  G   G   A
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVA--VFGRFEDVTPEEFRRVFDVNYLGHVYGTLAA 119

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
              +  +  G ++   S     +     AY+ SK+ +    + L AEL   G  ++    
Sbjct: 120 LPHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLV 179

Query: 182 YGLVSGISSRNSINPAILEAFLSEMGN---LRGQVLNAEGIANAALYLATDEASDVT 235
                      ++N        S MG        +   E +A A +  A     +V 
Sbjct: 180 Q--------PTAMNTPFFGHARSYMGKKPKPPPPIYQPERVAEAIVRAAEHPRREVK 228

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 74/262 (28%), Positives = 123/262 (46%), Gaps = 33/262 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI------ADVQDNLGQALACKLGEDVCYI 54
           L+ KV ++TG   GIG A A    + G+ VV+       ++ + L   +  + G +   +
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETL--KMVKENGGEGIGV 61

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS-VLDTPKSDLDRVLAVNTTG 113
             DV++ +    L    + +YG  DI+ NNAG+   G  S  L+     +D+ ++ +   
Sbjct: 62  LADVSTREGCETLAKATIDRYGVADILVNNAGL---GLFSPFLNVDDKLIDKHISTDFKS 118

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG-----IIALVKILAAE 168
               ++  A+ M  +  G I+  AS    +AGI  PAY +S YG     +I L K LA E
Sbjct: 119 VIYCSQELAKEM--REGGAIVNIAS----VAGI-RPAYGLSIYGAMKAAVINLTKYLALE 171

Query: 169 LRQYGLRVNCVSPYGLVS---GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           L    +RVN ++P G V    G S    +   + E   +E   L G++L+ E +A     
Sbjct: 172 LAPK-IRVNAIAP-GFVKTKLGESLFKVLG--MSEKEFAEKFTLMGKILDPEEVAEFVAA 227

Query: 226 LATDEASDVTGLNLVVDGGFSV 247
           +   E+  +TG   V+D G S+
Sbjct: 228 ILKIES--ITGQVFVLDSGESL 247

Length = 252

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 86.1 bits (214), Expect = 8e-20
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 26/261 (9%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKLGEDVCYIH 55
           LEGK  +I G A+   I    AK   E GA++      + L +    LA +LG D+    
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVL-P 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR--GFASVLDTPKSDLDRVLAVNTTG 113
           CDVT+++ I  L  T   K+GKLD + ++     +       LDT +      + ++   
Sbjct: 63  CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY---TVSKYGIIALVKILAAELR 170
            F     AAR ++    G IL      +E      P Y    V+K  + A V+ LAA+L 
Sbjct: 123 -FTALAKAARPLMNN-GGSILTLTYLGSERV---VPNYNVMGVAKAALEASVRYLAADLG 177

Query: 171 QYGLRVNCVSPYGL----VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           + G+RVN +S   +     SGI         +L+    E      + +  E + N A +L
Sbjct: 178 KEGIRVNAISAGPIRTLAASGIGDFR----KMLKEN--EANAPLRRNVTIEEVGNTAAFL 231

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
            +D +S +TG  + VD G+ +
Sbjct: 232 LSDLSSGITGEIIYVDSGYHI 252

Length = 259

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 86.0 bits (213), Expect = 1e-19
 Identities = 79/259 (30%), Positives = 116/259 (44%), Gaps = 28/259 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQAL----ACKLGEDVCYIH 55
            + +  ++TGG SGIG   A      GA V+I     D L  A     A K    V Y  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD-----RVLAVN 110
            DVT ED++   VD A A +G+L       G+V     S    P + +D     R + +N
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLH------GVVHCAGGSETIGPITQIDSDAWRRTVDLN 118

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
             G     KHAAR ++    G  +  +S           AY V+K  +  L+K+ A EL 
Sbjct: 119 VNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELG 178

Query: 171 QYGLRVNCVSP----YGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALY 225
              +RVN + P      LV+ I+     +P +   + +     R G+V   E +AN A++
Sbjct: 179 PSWVRVNSIRPGLIRTDLVAPITE----SPELSADYRACTPLPRVGEV---EDVANLAMF 231

Query: 226 LATDEASDVTGLNLVVDGG 244
           L +D AS +TG  + VDGG
Sbjct: 232 LLSDAASWITGQVINVDGG 250

Length = 276

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 85.2 bits (211), Expect = 2e-19
 Identities = 75/262 (28%), Positives = 124/262 (47%), Gaps = 33/262 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIH- 55
           + GK+ ++TGG+ GIG   A+ F E GA+V+I    A+   +  + L+   GE  C    
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELS-AYGE--CIAIP 60

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++SE+ I  LV     +  +LD++ NNAG      A +   P+S  D+V+ +N    F
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGAT--WGAPLEAFPESGWDKVMDINVKSVF 118

Query: 116 L-------------GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
                          A++ ARV        I   + A   ++G+ + +Y  SK  +  L 
Sbjct: 119 FLTQALLPLLRAAATAENPARV--------INIGSIAGIVVSGLENYSYGASKAAVHQLT 170

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
           + LA EL    + VN ++P    S +++    +PA LEA    +    G+    E +A  
Sbjct: 171 RKLAKELAGEHITVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIP--LGRWGRPEDMAGL 228

Query: 223 ALYLATDEASDVTGLNLVVDGG 244
           A+ LA+   + +TG  + VDGG
Sbjct: 229 AIMLASRAGAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 84.0 bits (208), Expect = 4e-19
 Identities = 76/273 (27%), Positives = 114/273 (41%), Gaps = 64/273 (23%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-------------------DVQDNLGQ 41
           L GK   ITG + GIG A A     +GA VVIA                   +++   G+
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 42  ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS 101
           AL C           D+  ED++   V+ AV K+G +DI+ NNA  +       LDTP  
Sbjct: 61  ALPCI---------VDIRDEDQVRAAVEKAVEKFGGIDILVNNASAIS--LTGTLDTPMK 109

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP------------ 149
             D ++ VNT G +L     ++  +P  K       S    I  +  P            
Sbjct: 110 RYDLMMGVNTRGTYL----CSKACLPYLKK------SKNPHILNLSPPLNLNPKWFKNHT 159

Query: 150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL 209
           AYT++KYG+   V  +A E +  G+ VN + P         R +I  A +   L  +   
Sbjct: 160 AYTMAKYGMSMCVLGMAEEFKPGGIAVNALWP---------RTAIATAAMN-MLGGVDVA 209

Query: 210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVD 242
                  E +A+AA  + T  +S+ TG N ++D
Sbjct: 210 A-CCRKPEIMADAAYAILTKPSSEFTG-NFLID 240

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 84.1 bits (208), Expect = 4e-19
 Identities = 67/275 (24%), Positives = 108/275 (39%), Gaps = 68/275 (24%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITN 66
           +ITG ASGIGAA A+L  + G  V+  D+++                +  D+++ +    
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE--------------ADVIADLSTPEGRAA 48

Query: 67  LVDTAVAKYGK-LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +   +A+    LD + N AG+             +    VL VN    + G +     +
Sbjct: 49  AIADVLARCSGVLDGLVNCAGV----------GGTTVAGLVLKVN----YFGLRALMEAL 94

Query: 126 IP----QHKGCILFTAS--------------------------ACTEIAG-IGSPAYTVS 154
           +P     H    +  +S                          A  E AG  G  AY  S
Sbjct: 95  LPRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGS 154

Query: 155 KYGIIALVKILAAE-LRQYGLRVNCVSPYGLVSGI---SSRNSINPAILEAFLSEMGNLR 210
           K  +    +  AA  L   G+RVN V+P  + + I     ++      ++AF++ MG   
Sbjct: 155 KEALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPMG--- 211

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
            +    + IA    +LA+D AS + G NL VDGG 
Sbjct: 212 -RRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 84.2 bits (209), Expect = 5e-19
 Identities = 76/271 (28%), Positives = 115/271 (42%), Gaps = 48/271 (17%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIAD----VQDNLGQALACKLGEDVCYIHCD 57
            GKV ++TG A GIG   A      GA+VV+ D    V +   +  A   G +   +  D
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRA--AGGEALALTAD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAG--IVDRGFASVLDTP---KSDLDRVLAVNTT 112
           + +       +  AV  +G++D++ NN G  I  + F          ++++ R L     
Sbjct: 65  LETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEY--EEEQIEAEIRRSL----- 117

Query: 113 GGF--LGAKHAA-RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
             F  L    A    M+ Q  G I+  +S  T   GI    Y+ +K G+ AL   LA E 
Sbjct: 118 --FPTLWCCRAVLPHMLAQGGGAIVNVSSIAT--RGINRVPYSAAKGGVNALTASLAFEY 173

Query: 170 RQYGLRVNCVSPYGLVS--GISSRNSINPAILEA--------------FLSEMGNLRGQV 213
            ++G+RVN V+P G  +      RN+   +  E                +   G +  QV
Sbjct: 174 AEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQV 233

Query: 214 LNAEGIANAALYLATDEASDVTGLNLVVDGG 244
                   A L+LA+DEAS +TG  L V GG
Sbjct: 234 -------AAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 83.7 bits (207), Expect = 7e-19
 Identities = 80/269 (29%), Positives = 124/269 (46%), Gaps = 40/269 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           LEGKVA++TG +SG+GA  A++  + GAKVV+A  +    + L  ++   G     +  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT    I   V  A  + G +DI+ NN+G+       ++D   +D D V   NT G F  
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQ--KLVDVTPADFDFVFDTNTRGAFFV 124

Query: 118 AKHAARVMIPQHKGC--------ILFTASACTEIAG------IGSPAYTVSKYGIIALVK 163
           A+  A+ MI + KG         I+  AS    +AG      IG   Y +SK  ++ + +
Sbjct: 125 AQEVAKRMIARAKGAGNTKPGGRIINIAS----VAGLRVLPQIG--LYCMSKAAVVHMTR 178

Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL------RGQVLNAE 217
            +A E  ++G+ VN + P G +        IN      + +E G        R +V   E
Sbjct: 179 AMALEWGRHGINVNAICP-GYID-----TEIN---HHHWETEQGQKLVSMLPRKRVGKPE 229

Query: 218 GIANAALYLATDEASDVTGLNLVVDGGFS 246
            +    L LA DE+  + G  +  D GF 
Sbjct: 230 DLDGLLLLLAADESQFINGAIISADDGFG 258

Length = 258

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 84.1 bits (208), Expect = 1e-18
 Identities = 77/258 (29%), Positives = 115/258 (44%), Gaps = 28/258 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHC 56
           L GKVA++TG A+G+G A A      GA VV+ DV   L  +         G     +  
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           D++       LV TAV   G LDI+ NNAGI  DR   ++ D    + D V+AV+  G F
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSD---EEWDAVIAVHLRGHF 125

Query: 116 LGAKHAARVMIPQHK-------GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
           L  ++AA     + K       G I+ T+S    +  +G   Y  +K GI AL    A  
Sbjct: 126 LLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARA 185

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV--LNAEGIANAALYL 226
           L +YG+R N + P        +R ++   +            G +  L+ E +     +L
Sbjct: 186 LGRYGVRANAICP-------RARTAMTADVFGDAPDVEA---GGIDPLSPEHVVPLVQFL 235

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+  A++V G   +V G 
Sbjct: 236 ASPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 81.9 bits (203), Expect = 2e-18
 Identities = 63/252 (25%), Positives = 98/252 (38%), Gaps = 29/252 (11%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI------ADVQDNLGQALACKLGEDVCYIHCD 57
            VA++TG A  IG A A+     G +VV+      A+ Q  L   L       V  +  D
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQR-LKDELNALRNSAVL-VQAD 58

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFA-SVLDTPKSDLDRVLAVNTTGGFL 116
           ++      +LV  A   +G+ D++ NNA      +   +    +     +  +N    +L
Sbjct: 59  LSDFAACADLVAAAFRAFGRCDVLVNNASAF---YPTPLGQGSEDAWAELFGINLKAPYL 115

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             +  AR +     G I+    A T+    G  AY +SK  +  L +  A EL    +RV
Sbjct: 116 LIQAFARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEG----IANAALYLATDEAS 232
           N ++P GL         I              LR   L        IA+A ++L      
Sbjct: 175 NGIAP-GL---------ILLPEDMDAEYRENALRKVPLKRRPSAEEIADAVIFLLDSNY- 223

Query: 233 DVTGLNLVVDGG 244
            +TG  + VDGG
Sbjct: 224 -ITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 81.9 bits (203), Expect = 4e-18
 Identities = 71/255 (27%), Positives = 101/255 (39%), Gaps = 32/255 (12%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCD 57
           GKV +ITG  SGIG   A+   + GA V+IA   +  G+  A ++        V  I  D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++S   +    +  +A++ +LDI+ NNAGI     A      K   +   AVN  G FL 
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGI----MAPPRRLTKDGFELQFAVNYLGHFLL 116

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI---------------GSPAYTVSKYGIIALV 162
                 V+       I+  +S     AG                   AY  SK   I   
Sbjct: 117 TNLLLPVLKASAPSRIVNVSS-IAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFT 175

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
           + LA  L   G+ VN + P G+V     R + +  +L   L           + E  A  
Sbjct: 176 RELARRLEGTGVTVNALHP-GVVRTELLRRNGSFFLLYKLLR-----PFLKKSPEQGAQT 229

Query: 223 ALYLATD-EASDVTG 236
           ALY AT  E   V+G
Sbjct: 230 ALYAATSPELEGVSG 244

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 81.1 bits (200), Expect = 4e-18
 Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 30/241 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-----------IADVQDNLGQALACKLGE 49
           L  ++ ++TG + GIG  AA  +   GA V+           +AD  +  G         
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 50  DVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAV 109
           D   + C  TSE     L       Y +LD + +NAG++      + +        V  V
Sbjct: 62  D--LLTC--TSE-NCQQLAQRIAVNYPRLDGVLHNAGLLG-DVCPLSEQNPQVWQDVXQV 115

Query: 110 NTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
           N    F+  +    +++    G ++FT+S+          AY VSK+    L ++LA E 
Sbjct: 116 NVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEY 175

Query: 170 RQYGLRVNCVSPYGLVSGI------SSRNSINPA---ILEAFLSEMGN----LRGQVLNA 216
           +Q  LRVNC++P G  + +      +           I+  +L  MG+      G   +A
Sbjct: 176 QQRNLRVNCINPGGTRTAMRASAFPTEDPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDA 235

Query: 217 E 217
           +
Sbjct: 236 Q 236

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 80.9 bits (200), Expect = 4e-18
 Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 7/180 (3%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIA--DVQDNLGQALACKLGEDVCYIHCDVTSE 61
           KVA++TG + GIG   A+    +G +V +   + +D    + +   G DV  +  D    
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS---GGDVEAVPYDARDP 57

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           ++   LVD    ++G++D++ +NAGI      ++ +   ++L+   ++N        +  
Sbjct: 58  EDARALVDALRDRFGRIDVLVHNAGIGRPT--TLREGSDAELEAHFSINVIAPAELTRAL 115

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
              +     G ++F  S   +    G+  Y+ SK+ + AL   L  E   +G+RV+ V P
Sbjct: 116 LPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCP 175

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 80.7 bits (199), Expect = 7e-18
 Identities = 72/261 (27%), Positives = 119/261 (45%), Gaps = 36/261 (13%)

Query: 4   KVAIITGGASGIGAAAAKL-----------FHEN--GAKVVIADVQDNLGQALACKLGED 50
            +A++TGG+ GIG A A L           + +N   A+ V+  +    G+A        
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV------ 55

Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
              +  D++ E+++  +          L  + NNAGI+     +V +     ++RVL+ N
Sbjct: 56  ---LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQ-CTVENLTAERINRVLSTN 111

Query: 111 TTGGFLGAKHAARVMIPQHKG---CILFTASACTEIAGIGSPA----YTVSKYGIIALVK 163
            TG FL  + A + M  +H G    I+  +SA + +   G+P     Y  SK  I  L  
Sbjct: 112 VTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRL---GAPGEYVDYAASKGAIDTLTT 168

Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
            L+ E+   G+RVNCV P G +      +   P  ++   S +   RG     E +A A 
Sbjct: 169 GLSLEVAAQGIRVNCVRP-GFIYTEMHASGGEPGRVDRVKSNIPMQRGG--QPEEVAQAI 225

Query: 224 LYLATDEASDVTGLNLVVDGG 244
           ++L +D+AS VTG  + + GG
Sbjct: 226 VWLLSDKASYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 80.0 bits (198), Expect = 8e-18
 Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 13/182 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKLGEDVCYIHCDVT 59
           L G   +ITGG SGIG A A+ F E G  V+I    ++ L +A   K   ++  I  DV 
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAK--KELPNIHTIVLDVG 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             + +  L +  +++Y  LDI+ NNAGI                 D  +  N     +G 
Sbjct: 61  DAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLD-KADTEIDTN----LIGP 115

Query: 119 KHAARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
               +  +P    Q +  I+  +S    +    +P Y  +K  + +    L  +L+  G+
Sbjct: 116 IRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGV 175

Query: 175 RV 176
            V
Sbjct: 176 EV 177

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 79.8 bits (197), Expect = 1e-17
 Identities = 69/245 (28%), Positives = 107/245 (43%), Gaps = 15/245 (6%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVTSE 61
           GK  ++ GG+ GIGAA  + F  +GA V        +  + LA + G     +  D    
Sbjct: 6   GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATA--VQTDSADR 63

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           D +       V K G LDI+  NAGI   G A  LD    D+DR+  +N    +  +  A
Sbjct: 64  DAVI----DVVRKSGALDILVVNAGIAVFGDALELDA--DDIDRLFKINIHAPYHASVEA 117

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           AR M P+    I+  +     +   G  AY  SK  +  + + LA +    G+ +N V P
Sbjct: 118 ARQM-PEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQP 176

Query: 182 YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV 241
             + +  +  N     ++ +F++   + R      E +A    +LA  EAS VTG    +
Sbjct: 177 GPIDTDANPANGPMKDMMHSFMAIKRHGR-----PEEVAGMVAWLAGPEASFVTGAMHTI 231

Query: 242 DGGFS 246
           DG F 
Sbjct: 232 DGAFG 236

Length = 237

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 79.9 bits (197), Expect = 2e-17
 Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 22/238 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKL----GEDVCYIH 55
             G+VA++TG + GIGAA A+   ++G KVV  A   D + +ALA +        +    
Sbjct: 4   WRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKI-EALAAECQSAGYPTLFPYQ 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CD+++E++I ++      ++  +D+  NNAG+       +L         +  VN     
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEP--LLSGKTEGWKEMFDVNVLALS 120

Query: 116 LGAKHAARVMIPQH--KGCILFTASACTEIAGIGSPA--YTVSKYGIIALVKILAAELRQ 171
           +  + A + M  ++   G I+   S         S    Y  +K+ + AL + L  ELR+
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 172 YGL--RVNCVSPYGLV-SGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALY 225
                R   +SP GLV +  + +   N P    A    +       L  E +ANA LY
Sbjct: 181 AKTHIRATSISP-GLVETEFAFKLHDNDPEKAAATYESI-----PCLKPEDVANAVLY 232

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 79.3 bits (196), Expect = 2e-17
 Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 32/259 (12%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQA---LACKLGEDVCYIHCDV 58
            KV IITGG+SG+G A AK F E GA VVI    ++ L +A   +    G+ V  +  DV
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ-VLTVQMDV 59

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAG---------IVDRGFASVLDTPKSDLDRVLAV 109
            + +++  +V+    K+G++D + NNA          +   G+ SV+D        VL  
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDI-------VL-- 110

Query: 110 NTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
              G F  ++   +  I +  KG I+   +     AG G      +K G++A+ + LA E
Sbjct: 111 --NGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVE 168

Query: 169 L-RQYGLRVNCVSPYGLV--SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
             R+YG+RVN ++P G +  +G + +   +    +  +  +    G++   E IA  A +
Sbjct: 169 WGRKYGIRVNAIAP-GPIERTGGADKLWESEEAAKRTIQSVP--LGRLGTPEEIAGLAYF 225

Query: 226 LATDEASDVTGLNLVVDGG 244
           L +DEA+ + G  + +DGG
Sbjct: 226 LLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 79.1 bits (195), Expect = 3e-17
 Identities = 76/264 (28%), Positives = 115/264 (43%), Gaps = 36/264 (13%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE------DVCYIHCD 57
           +VA++TG  SGIG A A+   + G +V +        + LA  + E      +     CD
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARG---EEGLATTVKELREAGVEADGRTCD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL-DRVLAVNTTGGFL 116
           V S  EI  LV  AVA+YG +D++ NNAG    G  + L     +L   V+  N TG F 
Sbjct: 61  VRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELA---DELWLDVVETNLTGVFR 117

Query: 117 GAKH--AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
             K    A  M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G+
Sbjct: 118 VTKEVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGI 177

Query: 175 RVNCVSP--------------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA 220
            VN V P              Y  +  +S+         +   + +    G+ +  E +A
Sbjct: 178 TVNAVCPGFVETPMAASVREHYADIWEVSTE-----EAFDRITARVP--LGRYVTPEEVA 230

Query: 221 NAALYLATDEASDVTGLNLVVDGG 244
               YL  D A+ VT   L V GG
Sbjct: 231 GMVAYLIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.5 bits (194), Expect = 4e-17
 Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 16/191 (8%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDV-CYIHC---DV 58
           K  +ITG +SGIG A A+ F + GAK+++     + L Q LA +LG      +     DV
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERL-QELADELGAKFPVKVLPLQLDV 59

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           +  + I   ++    ++  +DI+ NNAG+   G     +    D + ++  N  G     
Sbjct: 60  SDRESIEAALENLPEEFRDIDILVNNAGLA-LGLDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGL 174
           +    +MI +++G I+   S    IAG     G   Y  +K  +      L  +L   G+
Sbjct: 119 RLILPIMIARNQGHIINLGS----IAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGI 174

Query: 175 RVNCVSPYGLV 185
           RV  + P GLV
Sbjct: 175 RVTNIEP-GLV 184

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 79.6 bits (197), Expect = 6e-17
 Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKL---GEDVCYIHC 56
           +  +V +ITG ++G+G A A+ F   GAKVV +A  ++ L +ALA ++   G +   +  
Sbjct: 6   IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGL-EALAAEIRAAGGEALAVVA 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DV   + +    D A  + G +D   NNA + V   F    D    +  RV  V   G  
Sbjct: 65  DVADAEAVQAAADRAEEELGPIDTWVNNAMVTV---FGPFEDVTPEEFRRVTEVTYLGVV 121

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQY 172
            G   A R M P+ +G I+   SA   +A    P   AY  +K+ I      L  EL   
Sbjct: 122 HGTLAALRHMRPRDRGAIIQVGSA---LAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHD 178

Query: 173 GLRV 176
           G  V
Sbjct: 179 GSPV 182

Length = 334

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 77.4 bits (190), Expect = 1e-16
 Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 34/264 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKV-------------VIADVQDNLGQALACKL 47
           L+GKVA++TG + GIG A A     +GA V              I +++ N G+A     
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAF---- 59

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKY------GKLDIMYNNAGIVDRGFASVLDTPKS 101
                 I  D+ S D +  LV+    +        ++DI+ NNAGI  +G  ++ +T + 
Sbjct: 60  -----LIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQG--TIENTTEE 112

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL 161
             D ++AVN    F   +    ++  + +G ++  +SA   +   GS AY +SK  +  +
Sbjct: 113 IFDEIMAVNIKAPFFLIQQTLPLL--RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTM 170

Query: 162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN 221
              LA  L + G+ VN + P    + I+++   +P I     +   ++ G++   E IA+
Sbjct: 171 TLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRN--FATNSSVFGRIGQVEDIAD 228

Query: 222 AALYLATDEASDVTGLNLVVDGGF 245
           A  +LA+ ++  VTG  + V GGF
Sbjct: 229 AVAFLASSDSRWVTGQIIDVSGGF 252

Length = 254

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 75.8 bits (187), Expect = 3e-16
 Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 13/183 (7%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED---VCYIHCDVTSED 62
            +ITG +SGIG A A+ F + G  V +A  + +    L  +L      V     DVT E+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
               ++    A+ G LD++  NAG+      S+ D         +  N  G     + A 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGV--GKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118

Query: 123 RVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
                + +G ++  +S    +A +    G+ AY+ SK  + +L + L  ++++ G+RV  
Sbjct: 119 PQFRAKGRGHLVLISS----VAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTV 174

Query: 179 VSP 181
           ++P
Sbjct: 175 INP 177

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 75.2 bits (185), Expect = 7e-16
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 13/211 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
             G   +ITGGASGIG A AK F E G  V+I    ++ L +A A     ++    CDV 
Sbjct: 3   TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP--EIHTEVCDVA 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             D    LV+    +Y  L+++ NNAGI  +       D    D ++ +A N     L  
Sbjct: 61  DRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLD-DAEQEIATN----LLAP 115

Query: 119 KHAARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
                +++P    Q +  I+  +S    +    +P Y  +K  I +    L  +L+   +
Sbjct: 116 IRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSV 175

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSE 205
            V  ++P  + +   +  +     L AF+SE
Sbjct: 176 EVIELAPPLVDTTEGNTQARGKMPLSAFISE 206

Length = 245

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 75.0 bits (185), Expect = 1e-15
 Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 23/188 (12%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-----DNLGQALACKLGEDVCYIHCD 57
            K  +ITG  SG G   A      G  V IA VQ       L    A + G  +     D
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNV-IAGVQIAPQVTALRAE-AARRGLALRVEKLD 59

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +T        +D A A    +D++ NNAGI + G  +V+D P   +  +   N  G    
Sbjct: 60  LTDA------IDRAQAAEWDVDVLLNNAGIGEAG--AVVDIPVELVRELFETNVFGPLEL 111

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSP----AYTVSKYGIIALVKILAAELRQYG 173
            +   R M+ + KG ++FT+S    +AG+ +     AY  SK+ + A+ + + AEL+ +G
Sbjct: 112 TQGFVRKMVARGKGKVVFTSS----MAGLITGPFTGAYCASKHALEAIAEAMHAELKPFG 167

Query: 174 LRVNCVSP 181
           ++V  V+P
Sbjct: 168 IQVATVNP 175

Length = 257

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 1e-15
 Identities = 55/175 (31%), Positives = 85/175 (48%), Gaps = 5/175 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA--CK-LGEDVCYIHCD 57
           L G V +ITG +SGIG A A+ F   GA++V+A   +   QA+A  C+ LG +V  +  D
Sbjct: 5   LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT  D++  L   A +  G++D+  NN G+   G     +TP    ++V+  N  G    
Sbjct: 65  VTDADQVKALATQAASFGGRIDVWVNNVGVGAVG--RFEETPIEAHEQVIQTNLIGYMRD 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           A  A  +   Q  G  +   S     A   + AY+ SK+G+    + L  EL  +
Sbjct: 123 AHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADH 177

Length = 330

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 3e-15
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 24/261 (9%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKL-GEDVCYI 54
           LEGK  ++ G A+   I    A+  H  GAK+V     + L +    LA  L G++   +
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR---VLAVNT 111
            CDVTS++EIT   +T   + G +  + +     ++     L     +  R   +LA N 
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKED---LRGEFLETSRDGFLLAQNI 121

Query: 112 TGGFLGA-KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
           +   L A    A+ ++ +  G I+       E          V+K  + A VK LA +L 
Sbjct: 122 SAYSLTAVAREAKKLMTE-GGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLG 180

Query: 171 QYGLRVNCVS--PYGLVS--GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           + G+RVN +S  P   +S  G+   NSI   I      E   LR      E + + A +L
Sbjct: 181 KDGIRVNAISAGPIRTLSAKGVGGFNSILKEI-----EERAPLRRTT-TQEEVGDTAAFL 234

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
            +D +  VTG N+ VD G+ +
Sbjct: 235 FSDLSRGVTGENIHVDSGYHI 255

Length = 257

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 73.6 bits (181), Expect = 3e-15
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 29/200 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKV-------------VIADVQDNLGQALACKL 47
           L GK+A++TG + GIG   A    E GA V                +++   G+ +    
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIP--- 57

Query: 48  GEDVCYIHCDVTSEDEITNLVD-TAVAKYGKLDIMYNNA-GIVDRGFASV----LDTPKS 101
                 + CD + +DE+  L +  A  + G+LDI+ NNA   V      V     + P +
Sbjct: 58  ------VRCDHSDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPT 111

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL 161
             D +  V     +  + +AA +M+   KG I+   S+   +  + + AY V K  I  +
Sbjct: 112 IWDDINNVGLRAHYACSVYAAPLMVKAGKGLIV-IISSTGGLEYLFNVAYGVGKAAIDRM 170

Query: 162 VKILAAELRQYGLRVNCVSP 181
              +A EL+ +G+ V  + P
Sbjct: 171 AADMAHELKPHGVAVVSLWP 190

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.3 bits (180), Expect = 3e-15
 Identities = 75/265 (28%), Positives = 111/265 (41%), Gaps = 33/265 (12%)

Query: 1   LEGKVAIITGG--ASGIGAAAAKLFHENGAKV---------------VIADVQDNLGQAL 43
           L+ KVA++TG     GIGAA  K   E GA +               V  D Q  L + L
Sbjct: 4   LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEEL 63

Query: 44  ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSD 102
               G  V  +  D+T  D    L++    + G   I+ NNA    +  F S L     +
Sbjct: 64  LK-NGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDF-SNLTA--EE 119

Query: 103 LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
           LD+   VN     L +   AR    +  G I+   S   +   +G  AY  +K  I AL 
Sbjct: 120 LDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALT 179

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIA 220
             LAAE+   G+ VN ++P     G +    +   I +  L     G + G+  +A   A
Sbjct: 180 SSLAAEVAHLGITVNAINP-----GPTDTGWMTEEIKQGLLPMFPFGRI-GEPKDA---A 230

Query: 221 NAALYLATDEASDVTGLNLVVDGGF 245
               +LA++EA  +TG  +  +GGF
Sbjct: 231 RLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 74.1 bits (182), Expect = 4e-15
 Identities = 74/254 (29%), Positives = 104/254 (40%), Gaps = 20/254 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------ADVQDNLGQALACKLGEDVCY 53
           L+G+ A+ITG  SGIG A A  F   GA + +        D  + +   L    G     
Sbjct: 53  LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVV--QLIQAEGRKAVA 110

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           +  D+  E     LV+ AV + G LDI+ N AG        + D      D     N   
Sbjct: 111 LPGDLKDEAFCRQLVERAVKELGGLDILVNIAG-KQTAVKDIADITTEQFDATFKTNVYA 169

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            F   K A   + P     I+ T S  +         Y  +K  I+A  K LA ++ + G
Sbjct: 170 MFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKG 227

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALY--LATDE 230
           +RVN V+P  + + +       P  +  F SE    R GQ +       A LY  LA+ E
Sbjct: 228 IRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEM-----APLYVLLASQE 282

Query: 231 ASDVTGLNLVVDGG 244
           +S VTG    V GG
Sbjct: 283 SSYVTGEVFGVTGG 296

Length = 300

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 75.0 bits (185), Expect = 5e-15
 Identities = 53/181 (29%), Positives = 79/181 (43%), Gaps = 21/181 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHC 56
           L GKV +ITG +SGIG A A    E GA V +     +  D L   +  K G    Y  C
Sbjct: 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY-TC 427

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAG-IVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           D+T    + + V   +A++G +D + NNAG  + R   +  D    D +R +AVN  G  
Sbjct: 428 DLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR-FHDYERTMAVNYFG-- 484

Query: 116 LGAKHAARV-------MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
                A R+       M  +  G ++  +S   +       AY  SK  + A   + A+E
Sbjct: 485 -----AVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASE 539

Query: 169 L 169
            
Sbjct: 540 T 540

Length = 657

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 72.6 bits (179), Expect = 6e-15
 Identities = 57/246 (23%), Positives = 102/246 (41%), Gaps = 40/246 (16%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-----------IADVQDNLGQALACKLGE 49
           L+ ++ ++TG   GIG  AA  +  +GA V+           + D  +  G         
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPA---- 65

Query: 50  DVCYIHCDV--TSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRV 106
               I  D+   +      L DT   ++G+LD + +NAG++ + G   +          V
Sbjct: 66  ---IIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELG--PMEQQDPEVWQDV 120

Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILA 166
           + VN    F+  +    +++      ++FT+S+          AY VSK+    ++++LA
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLA 180

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPA-----------ILEAFLSEMG----NLRG 211
            E +   LRVNC++P G  + +  R S  P            I+  +L  MG       G
Sbjct: 181 DEYQGTNLRVNCINPGGTRTAM--RASAFPGEDPQKLKTPEDIMPLYLYLMGDDSRRKNG 238

Query: 212 QVLNAE 217
           Q  +A+
Sbjct: 239 QSFDAQ 244

Length = 247

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 72.4 bits (178), Expect = 7e-15
 Identities = 60/262 (22%), Positives = 98/262 (37%), Gaps = 25/262 (9%)

Query: 1   LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVI--------------ADVQDNLGQALA 44
           L  K+A++TG +  +GIGAA  +     G  +                 D +  L +   
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 45  CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
              G    ++  D++       +      + G   I+ NNA          L      LD
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTA--EQLD 120

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
           +  AVN     L +   A+    +  G I+   S  +        AY  +K  I A  K 
Sbjct: 121 KHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKS 180

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
           LA EL + G+ VN V+P     G +    I   +    + +    +G+V      A    
Sbjct: 181 LAPELAEKGITVNAVNP-----GPTDTGWITEELKHHLVPKF--PQGRVGEPVDAARLIA 233

Query: 225 YLATDEASDVTGLNLVVDGGFS 246
           +L ++EA  +TG  +  +GGFS
Sbjct: 234 FLVSEEAKWITGQVIHSEGGFS 255

Length = 256

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 72.9 bits (179), Expect = 8e-15
 Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 11/193 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKLGEDVCYIH---C 56
           L GK  ++TG +SGIG AAA+ F   GA VV +A  +D L  A+A ++           C
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL-DAVADRITRAGGDAMAVPC 96

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAG-IVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           D++  D +  LV     + G +DI+ NNAG  + R  A  LD    D++R + +N     
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDR-WHDVERTMVLNYYAPL 155

Query: 116 LGAKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              +  A  M+ +  G I+  A+    +E + + S  Y  SK  + A+ +++  E    G
Sbjct: 156 RLIRGLAPGMLERGDGHIINVATWGVLSEASPLFS-VYNASKAALSAVSRVIETEWGDRG 214

Query: 174 LRVNCVSPYGLVS 186
           +    +  Y LV+
Sbjct: 215 VHSTTLY-YPLVA 226

Length = 293

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 2e-14
 Identities = 57/186 (30%), Positives = 87/186 (46%), Gaps = 12/186 (6%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKLGEDVCYIHCDVTSE 61
            KV  ITG + G G A  +   E G +VV  A     L   LA K G+ +  +  DVT  
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA-DLAEKYGDRLLPLALDVTDR 61

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
             +   V+TAV  +G+LDI+ NNAG    G   + +  +S+    +  N    F GA   
Sbjct: 62  AAVFAAVETAVEHFGRLDIVVNNAGYGLFGM--IEEVTESEARAQIDTN----FFGALWV 115

Query: 122 ARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            + ++P    Q  G I+  +S     A   S  Y  SK+ +  + + LA E+ ++G++V 
Sbjct: 116 TQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVT 175

Query: 178 CVSPYG 183
            V P G
Sbjct: 176 LVEPGG 181

Length = 275

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 70.8 bits (174), Expect = 2e-14
 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 16/190 (8%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHCDVTSE 61
            +ITG + GIG    +     G   VIA  +D        AL       +  +  DVT  
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALG-ASHSRLHILELDVT-- 57

Query: 62  DEITNLVDTAVAKYG--KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           DEI    +    + G   LD++ NNAGI+   +    +    DL  V  VN  G  L  +
Sbjct: 58  DEIAESAEAVAERLGDAGLDVLINNAGILHS-YGPASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 120 HAARVMIPQHKGCILFTASA----CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            A   ++ +     +   S+      +    G  +Y  SK  +  L K LA EL++ G+ 
Sbjct: 117 -AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 176 VNCVSPYGLV 185
           V  + P G V
Sbjct: 176 VVSLHP-GWV 184

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 47/200 (23%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVV-----IADVQDNLGQALACKLGEDVCYIHC 56
             KVA++TG +SGIG A A+     G +V       A      G          V  +  
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----------VELLEL 52

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFA-SVLDTPKSDLDRVLAVNTTGGF 115
           DVT +  +   VD  +A+ G++D++ NNAG+   G A +  ++  +    +   N     
Sbjct: 53  DVTDDASVQAAVDEVIARAGRIDVLVNNAGV---GLAGAAEESSIAQAQALFDTN----V 105

Query: 116 LGAKHAARVMIP----QHKGCILFTASACTEIAGIGS-----PA-----YTVSKYGIIAL 161
            G     R ++P    Q  G           I  I S     PA     Y  SK+ +   
Sbjct: 106 FGILRMTRAVLPHMRAQGSG----------RIINISSVLGFLPAPYMALYAASKHAVEGY 155

Query: 162 VKILAAELRQYGLRVNCVSP 181
            + L  E+RQ+G+RV+ V P
Sbjct: 156 SESLDHEVRQFGIRVSLVEP 175

Length = 270

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 70.5 bits (172), Expect = 3e-14
 Identities = 72/262 (27%), Positives = 126/262 (48%), Gaps = 32/262 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-------------DVQDNLGQALACKL 47
           L+GKVA++TG + GIG A AK    +GA V I              ++Q N G A +  +
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS--I 59

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKY---GKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
           G ++  +H      + + + +D  +       K DI+ NNAGI    F  + +T +   D
Sbjct: 60  GANLESLH----GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF--IEETTEQFFD 113

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
           R+++VN    F   + A   +    +  I+  +SA T I+     AY+++K  I  +   
Sbjct: 114 RMVSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRISLPDFIAYSMTKGAINTMTFT 171

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLRGQVLNAEGIANA 222
           LA +L   G+ VN + P G +    +   ++  +++ + + +   N  G+V   E IA+ 
Sbjct: 172 LAKQLGARGITVNAILP-GFIKTDMNAELLSDPMMKQYATTISAFNRLGEV---EDIADT 227

Query: 223 ALYLATDEASDVTGLNLVVDGG 244
           A +LA+ ++  VTG  + V GG
Sbjct: 228 AAFLASPDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 70.1 bits (172), Expect = 7e-14
 Identities = 55/191 (28%), Positives = 87/191 (45%), Gaps = 23/191 (12%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQ--ALACKLGEDVC-YIHCDVT 59
           K   +TG ASGIG A A      GA++ + D   D L Q  A A  LG  V  +   D++
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             D +        A +G +D++ N AGI    + +V         R++ VN     +G  
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGIS--AWGTVDRLTHEQWRRMVDVN----LMGPI 114

Query: 120 HAARVMIPQ-----HKGCILFTASACTEIAGI-GSP---AYTVSKYGIIALVKILAAELR 170
           H     +P        G ++  +SA    AG+   P   AY+ SK+G+  L ++L  +L 
Sbjct: 115 HVIETFVPPMVAAGRGGHLVNVSSA----AGLVALPWHAAYSASKFGLRGLSEVLRFDLA 170

Query: 171 QYGLRVNCVSP 181
           ++G+ V+ V P
Sbjct: 171 RHGIGVSVVVP 181

Length = 272

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 69.6 bits (171), Expect = 9e-14
 Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 20/202 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVC-----YIHCDV 58
           K  +ITG  SG G   AK     G  V+   +  N   A   +    VC      +  DV
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNGPGAKELR---RVCSDRLRTLQLDV 57

Query: 59  TSEDEITNLVDTAVAKYGKLDI--MYNNAGIVDRGFASVLD-TPKSDLDRVLAVNTTGGF 115
           T  ++I           G+  +  + NNAGI+  GF    +  P  D  + + VN     
Sbjct: 58  TKPEQIKRAAQWVKEHVGEKGLWGLVNNAGIL--GFGGDEELLPMDDYRKCMEVN----L 111

Query: 116 LGAKHAARVMIP---QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
            G     +  +P   + KG ++  +S    +      AY  SK  + A    L  EL+ +
Sbjct: 112 FGTVEVTKAFLPLLRRAKGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPW 171

Query: 173 GLRVNCVSPYGLVSGISSRNSI 194
           G++V+ + P    +GI+  + +
Sbjct: 172 GVKVSIIEPGNFKTGITGNSEL 193

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 15/190 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK-------LGEDVCY 53
           L+GKV +I GGA  +G   A+     GAK V         +A A +        G     
Sbjct: 6   LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVA 65

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
              D+T+   +  L D A A +G+ DI  N  G V +    +++  +++ D + AVN+  
Sbjct: 66  FQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKS 123

Query: 114 GFLGAKHAARVMIPQHKGCILFTA--SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
            F   K A R +    K   L T+   A T        AY  SK  +    +  + E   
Sbjct: 124 AFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP----FYSAYAGSKAPVEHFTRAASKEFGA 179

Query: 172 YGLRVNCVSP 181
            G+ V  V P
Sbjct: 180 RGISVTAVGP 189

Length = 257

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 68.1 bits (166), Expect = 2e-13
 Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 18/250 (7%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-------LGQALACKLGEDVCYIHC 56
           ++A +TGG  GIG +  +  H++G KVV A    N       L    A  LG D      
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVV-AGCGPNSPRRVKWLEDQKA--LGFDFIASEG 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           +V   D      D   A+ G++D++ NNAGI  D  F  +    + D   V+  N T  F
Sbjct: 61  NVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKM---TREDWTAVIDTNLTSLF 117

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              K     M+ +  G I+  +S   +    G   Y+ +K GI      LA E+   G+ 
Sbjct: 118 NVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVT 177

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VN VSP G + G     +I P +LE  ++ +   R  + + + I +   +LA++E+   T
Sbjct: 178 VNTVSP-GYI-GTDMVKAIRPDVLEKIVATIPVRR--LGSPDEIGSIVAWLASEESGFST 233

Query: 236 GLNLVVDGGF 245
           G +  ++GG 
Sbjct: 234 GADFSLNGGL 243

Length = 246

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 3e-13
 Identities = 58/238 (24%), Positives = 106/238 (44%), Gaps = 20/238 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDV 58
           L+ K  ++TG + GIG A A+     GA++++        +ALA +L       ++  D+
Sbjct: 3   LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADL 62

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSE      V     + G ++++ NNAG+    FA + D     ++R+LA+N T      
Sbjct: 63  TSEAGR-EAVLARAREMGGINVLINNAGVNH--FALLEDQDPEAIERLLALNLTAPMQLT 119

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYGLR 175
           +    ++  Q    ++   S       IG P Y     SK+ +    + L  EL   G+R
Sbjct: 120 RALLPLLRAQPSAMVVNVGST---FGSIGYPGYASYCASKFALRGFSEALRRELADTGVR 176

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           V  ++P       ++R ++N   ++A    +GN    + + E +A A L     E ++
Sbjct: 177 VLYLAPR------ATRTAMNSEAVQALNRALGN---AMDDPEDVAAAVLQAIEKERAE 225

Length = 263

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 4e-13
 Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 51/272 (18%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKV-VIADVQDN-------LGQALACKLGEDVC 52
             GK  ++ GG SGI    A+ F   GA V V +  Q+        L QA    LG  V 
Sbjct: 7   FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLG--VS 64

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA---------GIVDRGFASVLDTPKSDL 103
               DV     +         ++G +D++ + A         G+   GF +V+D     +
Sbjct: 65  A---DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVD-----I 116

Query: 104 DRVLAVNTTGG---FLGAKHAARVMI--PQHKGCILFTASACTEIAGIGSPAYTVSKYGI 158
           D +   N        L    A+ + I  PQ    +   A  C             +K G+
Sbjct: 117 DLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCA------------AKAGV 164

Query: 159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP-AILEAFLSEMGNLR--GQVLN 215
             L + LA E    G+RVN + P G ++G      + P   L+A +++   L+  G    
Sbjct: 165 DMLTRTLALEWGPEGIRVNSIVP-GPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTK-- 221

Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            + IANAAL+LA+D AS +TG+ L VDGG+S+
Sbjct: 222 -QDIANAALFLASDMASYITGVVLPVDGGWSL 252

Length = 264

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 67.2 bits (165), Expect = 6e-13
 Identities = 49/185 (26%), Positives = 80/185 (43%), Gaps = 12/185 (6%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE 61
             K  +ITG +SG G A A+     G +VV     +           +       DVT  
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDF 62

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           D I  +V  A A +G +D++ NNAG    G   ++ ++P +++ R   VN      GA  
Sbjct: 63  DAIDAVVADAEATFGPIDVLVNNAGY---GHEGAIEESPLAEMRRQFEVN----VFGAVA 115

Query: 121 AARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             + ++P    + +G I+   S    I   G   Y  SK+ +  + + LA E+  +G+ V
Sbjct: 116 MTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175

Query: 177 NCVSP 181
             V P
Sbjct: 176 TAVEP 180

Length = 277

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 65.0 bits (158), Expect = 9e-13
 Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 3/90 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L GKVAI+TGG  GIG   A L  + GAKV++ D+    GQA       LG +  ++  D
Sbjct: 14  LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYD 73

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGI 87
           +  + +   ++   +  + ++D+++ NAG+
Sbjct: 74  MEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 65.9 bits (161), Expect = 2e-12
 Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 13/231 (5%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSE 61
           A++ G +SGIGAA A      G  V +   +    + L  K+    GE V     DVT  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVA-FPLDVTDP 71

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           D + + V  A    G+++++ + AG    G    + T     +  + ++  G    A   
Sbjct: 72  DSVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTE--QFESQVQIHLVGANRLATAV 129

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
              MI + +G ++F  S           AY  +K G+ A+V  L  EL   G+R + V P
Sbjct: 130 LPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHP 189

Query: 182 YGLVSGISSRNSINPAILEAFL---SEMGNLR-GQVLNAEGIANAALYLAT 228
              ++G+    S+   ++   L   ++ G  R    L A  +A A  ++A 
Sbjct: 190 GPTLTGMGW--SLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAE 238

Length = 274

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 73/249 (29%), Positives = 101/249 (40%), Gaps = 34/249 (13%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALA-CKLGEDVCYIHCDVTSEDEI 64
           ++ GG+SGIG A A+ F   GA+V IA   +D L  A      G  V     D+T E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAA- 59

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
              VD   A+ G  D +   A     G    L           A+++   F GA   AR 
Sbjct: 60  ---VDAFFAEAGPFDHVVITAADTPGGPVRALPLA----AAQAAMDSK--FWGAYRVARA 110

Query: 125 MIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGII-----ALVKILAAELRQYGLRVN 177
                 G + F        +G  +  P+ +    G I     AL + LA EL    +RVN
Sbjct: 111 ARIAPGGSLTFV-------SGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVN 161

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDVT 235
            VSP GLV      + +     EA  +         +V   E +ANA L+LA +     T
Sbjct: 162 TVSP-GLVD-TPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGF--TT 217

Query: 236 GLNLVVDGG 244
           G  ++VDGG
Sbjct: 218 GSTVLVDGG 226

Length = 230

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 65.6 bits (160), Expect = 2e-12
 Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 21/258 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           ++GK  +I+GG  GIG A    F ++G  +        +  + + + L  K G       
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYP 65

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR----GFASVLDTPKSDLDRVLAVNT 111
            ++   +    L       + ++D   +NA I  R    G+   +      L+ +     
Sbjct: 66  LNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATV 125

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEI-----AGIGSPAYTVSKYGIIALVKILA 166
               +GA+ AA+ M     G I+  +S    +     AG G+     SK  +  +VK  A
Sbjct: 126 NAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGT-----SKAAVETMVKYAA 180

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
            EL +  +RVN VS  G +   + +   N   ++A   E+  L  ++   E +A A L+L
Sbjct: 181 TELGEKNIRVNAVSG-GPIDTDALKAFTNYEEVKAKTEELSPL-NRMGQPEDLAGACLFL 238

Query: 227 ATDEASDVTGLNLVVDGG 244
            +++AS +TG  +VVDGG
Sbjct: 239 CSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.3 bits (160), Expect = 2e-12
 Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 8/176 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           ++GKV ++TG   GIG A  +     GA  V A  +D         LG  V  +  DVT 
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD---PESVTDLGPRVVPLQLDVTD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +    + A      + I+ NNAGI  R  + +L+  +  L   +  N  G    A+ 
Sbjct: 61  PASVAAAAEAA----SDVTILVNNAGIF-RTGSLLLEGDEDALRAEMETNYFGPLAMARA 115

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            A V+     G I+   S  + +       Y+ SK    +L + L AEL   G RV
Sbjct: 116 FAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRV 171

Length = 238

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 65.4 bits (160), Expect = 3e-12
 Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 19/187 (10%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC---DVTS 60
           KVA++TG +SGIG A A+     G  V  A  + +  + LA  LG     +H    DVT 
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLG-----VHPLSLDVTD 57

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E  I   VDT +A+ G++D++ NNAG    G  ++ D P  +  R   VN      GA  
Sbjct: 58  EASIKAAVDTIIAEEGRIDVLVNNAGYGSYG--AIEDVPIDEARRQFEVN----LFGAAR 111

Query: 121 AARVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             ++++P    Q  G I+  +S   +I       Y  +K+ +      L  E+  +G+ V
Sbjct: 112 LTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDV 171

Query: 177 NCVSPYG 183
             + P G
Sbjct: 172 VVIEPGG 178

Length = 273

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 64.4 bits (157), Expect = 5e-12
 Identities = 76/265 (28%), Positives = 119/265 (44%), Gaps = 31/265 (11%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG------QALACKLGEDVC 52
           L GK A++TG A+   I    A+  H  GA++ I  + D  G      + L   L   + 
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSL- 62

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR----GFASVLDTPKSDLDRVLA 108
           ++ CDV  + +I    +T   K+GKLDI+ +      +    G  S   T +    R L 
Sbjct: 63  FLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFS--ATSREGFARALE 120

Query: 109 VNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-PAYT---VSKYGIIALVKI 164
           ++        K A  +M     G I+      T + G+ + P Y    V+K  + A V+ 
Sbjct: 121 ISAYSLAPLCKAAKPLM--SEGGSIV----TLTYLGGVRAIPNYNVMGVAKAALEASVRY 174

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF--LSEMGNLRGQVLNAEGIANA 222
           LAAEL    +RVN +S  G +  ++S  S    IL+    + E   LR  V   E + N 
Sbjct: 175 LAAELGPKNIRVNAISA-GPIRTLAS--SAVGGILDMIHHVEEKAPLRRTVTQTE-VGNT 230

Query: 223 ALYLATDEASDVTGLNLVVDGGFSV 247
           A +L +D AS +TG  + VD G+ +
Sbjct: 231 AAFLLSDLASGITGQTIYVDAGYCI 255

Length = 258

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.3 bits (151), Expect = 2e-11
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 16/257 (6%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKLGEDVCYIH 55
           L+GK  +ITG  S   I    AK   E GA++    V D L +    +A +L  ++ +  
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVF-R 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTG 113
           CDV S+DEI  +       +  LD + ++ G   +   S   LD+   +        +  
Sbjct: 63  CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELR 170
                  AAR M+      I+   S    +  I  P Y V   +K  + A ++  AA L 
Sbjct: 123 SLPALAKAARPMMRGRNSAIV-ALSYLGAVRAI--PNYNVMGMAKASLEAGIRFTAACLG 179

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
           + G+R N +S  G +  +++    +   L   ++    LR  V   E + N A +L +D 
Sbjct: 180 KEGIRCNGISA-GPIKTLAASGIADFGKLLGHVAAHNPLRRNV-TIEEVGNTAAFLLSDL 237

Query: 231 ASDVTGLNLVVDGGFSV 247
           +S +TG    VDGG+S+
Sbjct: 238 SSGITGEITYVDGGYSI 254

Length = 261

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 65/281 (23%), Positives = 111/281 (39%), Gaps = 66/281 (23%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDN-------LGQALACKLGEDV 51
           L GK  ++ G A+   I    A+ F   GA++ +  + D        L + L   +    
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPI---- 63

Query: 52  CYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT 111
            ++  DV    ++  +      ++G+LD + +          S+   PK DL   +   +
Sbjct: 64  -FLPLDVREPGQLEAVFARIAEEWGRLDFLLH----------SIAFAPKEDLHGRVVDCS 112

Query: 112 TGGFLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII 159
             GF  A            + A  +M     G  L T S        G+    V  Y ++
Sbjct: 113 REGFALAMDVSCHSFIRMARLAEPLM---TNGGSLLTMSY------YGA-EKVVENYNLM 162

Query: 160 ALVKI--------LAAELRQYGLRVNCVSPYGLV----SGISSRNS-INPAILEAFLSEM 206
             VK         LAAEL   G+RV+ +SP  L     SGI   ++ +  A   A L   
Sbjct: 163 GPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL--- 219

Query: 207 GNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
                ++++ + +   A +LA+D A  +TG  L +DGG+ +
Sbjct: 220 ----RRLVDIDDVGAVAAFLASDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 3e-11
 Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 34/198 (17%)

Query: 2   EGKVAIITGGASGIG-----AAAAKLFHENGAKVVIA-----DVQDNL-GQALACKLGED 50
             K+AI+TG +SG G       A K +       VIA     + Q+NL  QA    L ++
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYL------VIATMRNPEKQENLLSQATQLNLQQN 55

Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
           +     DVT ++ I N     + + G++D++ NNAG  + GF    + P  +  +    N
Sbjct: 56  IKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVE--EIPVEEYRKQFETN 112

Query: 111 TTGGFLGAKHAARVMIP---QHKGCILFTASACTEIAG-IGSPA---YTVSKYGIIALVK 163
                 GA    + ++P   + K   +   S+   I+G +G P    Y  SKY +    +
Sbjct: 113 ----VFGAISVTQAVLPYMRKQKSGKIINISS---ISGRVGFPGLSPYVSSKYALEGFSE 165

Query: 164 ILAAELRQYGLRVNCVSP 181
            L  EL+ +G+ V  + P
Sbjct: 166 SLRLELKPFGIDVALIEP 183

Length = 280

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 61.5 bits (150), Expect = 4e-11
 Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 31/190 (16%)

Query: 8   ITGGASGIGAAAAKLFHENGAKV-VIADVQDNLGQALACKLGEDV-CYIHC-DVTSEDEI 64
           ITG +SGIG A A+ +   GA + ++A   D L QA A +L +     ++  DV   D +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDAL-QAFAARLPKAARVSVYAADVRDADAL 65

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD---RVLAVNTTG------GF 115
                  +A +G  D++  NAGI   G    L   + DL     V+  N  G       F
Sbjct: 66  AAAAADFIAAHGLPDVVIANAGI-SVG---TLTEEREDLAVFREVMDTNYFGMVATFQPF 121

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQ 171
           +    AAR      +G ++  AS    +AG+    G+ AY+ SK   I  ++ L  ELR 
Sbjct: 122 IAPMRAAR------RGTLVGIAS----VAGVRGLPGAGAYSASKAAAIKYLESLRVELRP 171

Query: 172 YGLRVNCVSP 181
            G+RV  ++P
Sbjct: 172 AGVRVVTIAP 181

Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 61.1 bits (149), Expect = 6e-11
 Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 15/198 (7%)

Query: 3   GKVAIITGGASGIGAAAAK-LFHENGAKVVIADVQDNLGQA---LACKLGEDVCYIHCDV 58
           G  A++TG   GIG A A+ L       ++I+  Q+ L      +  K G +   I  D 
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 59  TSEDEITNLVDTAVAKYGKLDI--MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           ++ D+I   ++  +     LDI  + NN GI        L+TP+ +L  ++ VN      
Sbjct: 61  SAGDDIYERIEKELE---GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLK 117

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYG 173
             +     M+ + KG I+  +S       I +P       SK  +    + L  E +  G
Sbjct: 118 MTRLILPGMVKRKKGAIVNISSF---AGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 174 LRVNCVSPYGLVSGISSR 191
           + V  + PY + + +S  
Sbjct: 175 IDVQSLLPYLVATKMSKI 192

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 6e-11
 Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 30/253 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHC 56
           L+GK   I G + G+G A A    + GA+V I     +    + + L+ K G  + Y+  
Sbjct: 3   LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLS-KYGN-IHYVVG 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+S +   N+++ A      +D +    G    G+        S L+ +L  +      
Sbjct: 61  DVSSTESARNVIEKAAKVLNAIDGLVVTVG----GYVEDTVEEFSGLEEMLTNHIKIPLY 116

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSP-----AYTVSKYGIIALVKILAAELRQ 171
               + R +    +G  +   S+   ++GI        +Y V+K G+   V+ILA+EL  
Sbjct: 117 AVNASLRFL---KEGSSIVLVSS---MSGIYKASPDQLSYAVAKAGLAKAVEILASELLG 170

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
            G+RVN ++P    + IS      P      L ++G+        E  A   ++L TDEA
Sbjct: 171 RGIRVNGIAP----TTISG--DFEPERNWKKLRKLGDDMAP---PEDFAKVIIWLLTDEA 221

Query: 232 SDVTGLNLVVDGG 244
             V G+ + VDGG
Sbjct: 222 DWVDGVVIPVDGG 234

Length = 238

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.9 bits (148), Expect = 8e-11
 Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 42/265 (15%)

Query: 1   LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDV 58
           L GK  ++ G A    I    A+   + GA V+     D + ++L   + E+   + CDV
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDV 64

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
            S++ I     T   + GK+D      GIV     ++    K +L   +   +  G+  A
Sbjct: 65  ASDESIERAFATIKERVGKID------GIVH----AIAYAKKEELGGNVTDTSRDGYALA 114

Query: 119 KH--------AARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKYGIIALVK 163
           +          A+   P     +L   ++   +   GS    P Y V   +K  + + V+
Sbjct: 115 QDISAYSLIAVAKYARP-----LLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVR 169

Query: 164 ILAAELRQYGLRVNCVSPYGL----VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGI 219
            LA +L + G+RVN +S   +    V+GI         +L+   S+   + G  +  E +
Sbjct: 170 YLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKD----LLK--ESDSRTVDGVGVTIEEV 223

Query: 220 ANAALYLATDEASDVTGLNLVVDGG 244
            N A +L +D ++ VTG  + VD G
Sbjct: 224 GNTAAFLLSDLSTGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 1e-10
 Identities = 72/264 (27%), Positives = 106/264 (40%), Gaps = 53/264 (20%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI--ADVQDNLGQALACK---LGEDVCYIHCDV 58
           + A++TG A  IG A A     +G  V +     +D   +ALA +   LG     +  D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADL 68

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             E E+  LV  A A  G + ++ NNA + +   A+         DR +A N    F+ A
Sbjct: 69  ADEAEVRALVARASAALGPITLLVNNASLFEYDSAASFTRAS--WDRHMATNLRAPFVLA 126

Query: 119 KHAARVMIPQHKGCIL-------------FTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           +  AR +    +G ++             F              +YT+SK  +    + L
Sbjct: 127 QAFARALPADARGLVVNMIDQRVWNLNPDFL-------------SYTLSKAALWTATRTL 173

Query: 166 AAEL--RQYGLRVNCVSPYG--LVSGISSRNSINPAILEAFLSEM-GNLRGQVLNAEGIA 220
           A  L  R   +RVN + P G  L SG  S         E F  +      G+    E IA
Sbjct: 174 AQALAPR---IRVNAIGP-GPTLPSGRQSP--------EDFARQHAATPLGRGSTPEEIA 221

Query: 221 NAALYLATDEASDVTGLNLVVDGG 244
            A  YL   +A  VTG  + VDGG
Sbjct: 222 AAVRYLL--DAPSVTGQMIAVDGG 243

Length = 258

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 72/262 (27%), Positives = 115/262 (43%), Gaps = 28/262 (10%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           ++GK  +I G A+   I    AK     GA++      + LG   + LA  LG D   + 
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFV-LP 63

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL--DTPKSDLDRVLAVNTTG 113
           CDV     +  + +    K+GKLD + +  G  D+        DT + +  R + ++   
Sbjct: 64  CDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFS 123

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELR 170
               AK AA++M P     +  T    T +     P Y V   +K  + A V+ LAA+  
Sbjct: 124 FTEIAKRAAKLM-PDGGSMLTLTYGGSTRVM----PNYNVMGVAKAALEASVRYLAADYG 178

Query: 171 QYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
             G+RVN +S  G V     +GI    +I      ++      LR  V   + +  +ALY
Sbjct: 179 PQGIRVNAISA-GPVRTLAGAGIGDARAIF-----SYQQRNSPLRRTV-TIDEVGGSALY 231

Query: 226 LATDEASDVTGLNLVVDGGFSV 247
           L +D +S VTG    VD G+++
Sbjct: 232 LLSDLSSGVTGEIHFVDSGYNI 253

Length = 271

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 59.8 bits (145), Expect = 2e-10
 Identities = 72/269 (26%), Positives = 110/269 (40%), Gaps = 42/269 (15%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           + GK  +I G A+   I    AK     GA++      D L    + LA +LG  V   H
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVA-GH 66

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTG 113
           CDVT E  I  + +T   K+GKLD + +  G  D+       +DT + +    + ++   
Sbjct: 67  CDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYS 126

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELR 170
               A+ A ++M       +  T     ++     P Y V   +K  + A VK LA +L 
Sbjct: 127 FTAVAQRAEKLM-TDGGSILTLTYYGAEKVM----PHYNVMGVAKAALEASVKYLAVDLG 181

Query: 171 QYGLRVNCVSPYGL----VSGISSRNSINPAILEAFLSEMGNLRGQVLNA--------EG 218
              +RVN +S   +     SGI     I              L+    NA        E 
Sbjct: 182 PKNIRVNAISAGPIKTLAASGIGDFRYI--------------LKWNEYNAPLRRTVTIEE 227

Query: 219 IANAALYLATDEASDVTGLNLVVDGGFSV 247
           + ++ALYL +D +  VTG    VD G+ V
Sbjct: 228 VGDSALYLLSDLSRGVTGEVHHVDSGYHV 256

Length = 272

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 57.9 bits (140), Expect = 5e-10
 Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 24/217 (11%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT 65
           A+I G   GIG A A+     G +++++         LA ++G        DV +E E+ 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA--RPADVAAELEVW 58

Query: 66  NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            L        G LD++   AG +      +  T  +   R+L  N TG  L  KHA  ++
Sbjct: 59  ALAQEL----GPLDLLVYAAGAILG--KPLARTKPAAWRRILDANLTGAALVLKHALALL 112

Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
               +   L        + G+   AY  +K  + A V++   E+R  GLR+  V P  + 
Sbjct: 113 AAGARLVFLGAYPELVMLPGLS--AYAAAKAALEAYVEVARKEVR--GLRLTLVRPPAVD 168

Query: 186 SGI------SSRNSINP-----AILEAFLSE-MGNLR 210
           +G+        + +++P     AILEA   E  G L 
Sbjct: 169 TGLWAPPGRLPKGALSPEDVAAAILEAHQGEPQGELD 205

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 8e-10
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 26/127 (20%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL-----GEDVCYIHC 56
           G+VA++TG  +G+G   A      GA VV+A V++ + G+A A ++     G DV     
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF- 115
           D+TS   +    D   A Y ++D++ NNAG        V+ TPK          T  GF 
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAG--------VMYTPKQ--------TTADGFE 118

Query: 116 --LGAKH 120
              G  H
Sbjct: 119 LQFGTNH 125

Length = 306

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 58.0 bits (140), Expect = 8e-10
 Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 47/277 (16%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVT 59
            A++TG A  IG++ A   H+ G +VV+     A     L   L  +          D++
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 60  SE----DEITNLVDTAVAKYGKLDIMYNNAGIV------------DRGFASVLDTPKSDL 103
           +          ++D     +G+ D++ NNA                 G    L+   ++L
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122

Query: 104 DRVLAVNTTGGFLGAKHAARVMIPQHKGC------ILFTASACTEIAGIGSPAYTVSKYG 157
                 N    +   K  A+               I+    A T+   +G   YT++K+ 
Sbjct: 123 ---FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHA 179

Query: 158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV---- 213
           +  L +  A EL    +RVN V+P     G+S    +  A+         + R +V    
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAP-----GLS---LLPDAMPF---EVQEDYRRKVPLGQ 228

Query: 214 --LNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
              +AE IA+  ++L + +A  +TG  + VDGG S+ 
Sbjct: 229 REASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSLT 265

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 9e-10
 Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 10/183 (5%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
            K   ITG +SG G    +     G +V     + +    L  + G+ +  +  DVT   
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSA 61

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
            +  +VD A A  G++D++ +NAG    G A  L    + + R +  N  G         
Sbjct: 62  AVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELS--DAQIRRQIDTNLIGSI----QVI 115

Query: 123 RVMIP----QHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           R  +P    Q  G I+  +S   +IA  G   Y  +K+GI   V+ +A E+  +G+    
Sbjct: 116 RAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTI 175

Query: 179 VSP 181
           V P
Sbjct: 176 VEP 178

Length = 276

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 57.9 bits (140), Expect = 9e-10
 Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 14/182 (7%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
            V +ITG +SGIG A A  F   G +V     +    +ALA         +  DV     
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA---AAGFTAVQLDVNDGAA 58

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
           +  L +   A++G LD++ NNAG    G   +LD     + R    N     +G   A  
Sbjct: 59  LARLAEELEAEHGGLDVLINNAGYGAMG--PLLDGGVEAMRRQFETNVF-AVVGVTRALF 115

Query: 124 VMIPQHKGCILFTASA----CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            ++ + +G ++   S      T  AG    AY  SK  + AL   L  EL  +G++V  V
Sbjct: 116 PLLRRSRGLVVNIGSVSGVLVTPFAG----AYCASKAAVHALSDALRLELAPFGVQVMEV 171

Query: 180 SP 181
            P
Sbjct: 172 QP 173

Length = 274

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 54/185 (29%), Positives = 79/185 (42%), Gaps = 12/185 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-LACKLGEDVCYIHCDVT 59
           ++ K  ++TG   GIG A  +    +GAK V A V+D    A L  K G+ V  +  DVT
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGI---VDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
             + I      A A+   +D++ NNAG+           L+  K ++D    VN  G   
Sbjct: 61  DPESIK----AAAAQAKDVDVVINNAGVLKPATLLEEGALEALKQEMD----VNVFGLLR 112

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            A+  A V+     G I+   S  +         Y+ SK    +L + L AEL   G  V
Sbjct: 113 LAQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLV 172

Query: 177 NCVSP 181
             V P
Sbjct: 173 LSVHP 177

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 57.0 bits (138), Expect = 1e-09
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 22/98 (22%)

Query: 1  LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
          L GK A++TG + GIGA  AK+    GA VV+             A+++   G+A A   
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASA--- 60

Query: 48 GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
                +  D+T E+ +  L+DTA  ++G LD +  NA
Sbjct: 61 ------VGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 56.5 bits (136), Expect = 2e-09
 Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 18/246 (7%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVI------ADVQDNLGQALACKLGEDVCYIHCDVTS 60
           ++TG + GIG A A     +G ++ +      +D +  +    A   G +   +  DV  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA--QGGNARLLQFDVAD 59

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
                 L++  +A++G    +  NAGI  D  F ++ +    D D V+  N  G +    
Sbjct: 60  RVACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSE---EDWDIVIHTNLDGFYNVIH 116

Query: 120 HAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
                MI   +G  + T ++ + + G  G   Y+ +K G+I   K LA EL +  + VNC
Sbjct: 117 PCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNC 176

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           ++P  + + + +   +   + EA  +   N  GQ      +A+ A +L +D AS VT   
Sbjct: 177 IAPGLIDTEMLA--EVEHDLDEALKTVPMNRMGQ---PAEVASLAGFLMSDGASYVTRQV 231

Query: 239 LVVDGG 244
           + V+GG
Sbjct: 232 ISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 56.5 bits (136), Expect = 3e-09
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 18/191 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-------DVQDNLGQALACKLGEDVCY 53
           L+ + A++TGG SGIG AAA  +   GA V I+       D QD   + +  + G     
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDV--KKIIEECGRKAVL 104

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           +  D++ E    +LV  A    G LDIM   AG        + D       +  A+N   
Sbjct: 105 LPGDLSDEKFARSLVHEAHKALGGLDIMALVAG-KQVAIPDIADLTSEQFQKTFAINVFA 163

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA---YTVSKYGIIALVKILAAELR 170
            F      A  ++P  KG  + T S+    A   SP    Y  +K  I+   + LA ++ 
Sbjct: 164 LFW-LTQEAIPLLP--KGASIITTSSIQ--AYQPSPHLLDYAATKAAILNYSRGLAKQVA 218

Query: 171 QYGLRVNCVSP 181
           + G+RVN V+P
Sbjct: 219 EKGIRVNIVAP 229

Length = 294

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHEN-GAKVV------IADVQDNLGQALAC--KLGEDVC 52
            G V ++TGGA GIG A A+      GA++V      +   ++   Q LA    LG  V 
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL 263

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTT 112
           YI  DVT    +  L++    +YG +D + + AG++    A +      D + VLA    
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLR--DALLAQKTAEDFEAVLAPKVD 321

Query: 113 G 113
           G
Sbjct: 322 G 322

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 52/192 (27%), Positives = 75/192 (39%), Gaps = 32/192 (16%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVV-----IADVQDNLGQALACKLGEDVCYIHCDV 58
           +  +ITG +SGIGA  A+    +G +V        DV     + L             D 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEA--------FQLDY 56

Query: 59  TSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
              + I  LV   +    G+LD ++NN      G  +V D P   L      N    F G
Sbjct: 57  AEPESIAALVAQVLELSGGRLDALFNNGAYGQPG--AVEDLPTEALRAQFEAN----FFG 110

Query: 118 AKHAARVMIP----QHKGCILFTASACTEIAGIGS----PAYTVSKYGIIALVKILAAEL 169
                R +IP    Q +G I+     C+ I G+       AY  SK+ I  L   L  EL
Sbjct: 111 WHDLTRRVIPVMRKQGQGRIV----QCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMEL 166

Query: 170 RQYGLRVNCVSP 181
           +  G+ V+ + P
Sbjct: 167 QGSGIHVSLIEP 178

Length = 277

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 52.9 bits (128), Expect = 2e-08
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 13/116 (11%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVI---------ADVQDNLGQALACKLGEDVCYIHCD 57
           ++TGG  G+G   A+   E GA+ ++          + +  L   L    G +V  + CD
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEA-RGAEVTVVACD 61

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           V+  D +  L+    A    L  + + AG++    A + +    D  RVLA   TG
Sbjct: 62  VSDRDAVRALLAEIRADGPPLRGVIHAAGVLR--DALLANMTAEDFARVLAPKVTG 115

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 38/192 (19%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHCDVT 59
             A+ITG + GIGAA A+        +++    A+  D L   L             D+T
Sbjct: 4   PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAEL-----PGATPFPVDLT 57

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT------TG 113
             + I      AV + G+LD++ +NAG+ D G   V ++   +    L VN       T 
Sbjct: 58  DPEAIA----AAVEQLGRLDVLVHNAGVADLG--PVAESTVDEWRATLEVNVVAPAELTR 111

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA----YTVSKYGIIALVKILAAEL 169
             L A  AA        G ++F  S     AG+ +      Y  SK+ + AL   L  E 
Sbjct: 112 LLLPALRAAH-------GHVVFINSG----AGLRANPGWGSYAASKFALRALADALREEE 160

Query: 170 RQYGLRVNCVSP 181
               +RV  V P
Sbjct: 161 PGN-VRVTSVHP 171

Length = 227

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 22/186 (11%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
            +V ++ GG   +G+A  + F   G  V   D+ +N  +A A         +    +  +
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAEN-EEADAS------IIVLDSDSFTE 53

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL-----DRVLAVNTTGGFLG 117
           +   +V +     GK+D +   AG    G+A    + KS       D +   N    F+ 
Sbjct: 54  QAKQVVASVARLSGKVDALICVAG----GWAG--GSAKSKSFVKNWDLMWKQNLWTSFIA 107

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR--QYGLR 175
           +  A + +     G ++ T +        G   Y  +K  +  L + LAAE      G  
Sbjct: 108 SHLATKHL--LSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGST 165

Query: 176 VNCVSP 181
            N + P
Sbjct: 166 ANAILP 171

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 63/273 (23%), Positives = 116/273 (42%), Gaps = 50/273 (18%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           ++GK  +I G A+   I    AK   E GA++    + + L    + +A +LG D  Y  
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVY-E 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTG 113
            DV+  +   +L ++     GK+D + ++     +       L+T K   +  +A+  + 
Sbjct: 62  LDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFN--IAMEISV 119

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT-------VSKYGIIALVKILA 166
             L      R ++P     +L   ++   ++ +G   Y        V+K  + + V+ LA
Sbjct: 120 YSLIE--LTRALLP-----LLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLA 172

Query: 167 AELRQYGLRVNCVSPYGL----VSGISSRNSINPAILEAFLSEMGNLRGQVLNA------ 216
            +L + G+RVN +S   +     SGI     I              L+   +NA      
Sbjct: 173 VDLGKKGIRVNAISAGPIKTLAASGIGDFRMI--------------LKWNEINAPLKKNV 218

Query: 217 --EGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             E + N+ +YL +D +S VTG    VD G+++
Sbjct: 219 SIEEVGNSGMYLLSDLSSGVTGEIHYVDAGYNI 251

Length = 274

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 53.1 bits (128), Expect = 3e-08
 Identities = 50/249 (20%), Positives = 89/249 (35%), Gaps = 32/249 (12%)

Query: 5   VAIITGGASGIGAAAAK-LFHENGAKVVIA---DVQDNLGQALACKLGEDVCYIHCDVTS 60
           V I+TG + GIG A A+ L       VV+      +         + G  V  +  D++ 
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIV----DRGFASVLDTPKSDLDRVLAVN------ 110
              +  L++      G+ D++ NNAG +       F  +      +L +   +N      
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLGPVSKIEFIDL-----DELQKYFDLNLTSPVC 115

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
            T   L A     +     K  ++  +S        G   Y  SK       ++LAAE  
Sbjct: 116 LTSTLLRAFKKRGL-----KKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE- 169

Query: 171 QYGLRVNCVSPYGLVS---GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
              +RV   +P G+V        R +       +    +   +G++L+ E  A     L 
Sbjct: 170 -PDVRVLSYAP-GVVDTDMQREIRETSADPETRSRFRSLKE-KGELLDPEQSAEKLANLL 226

Query: 228 TDEASDVTG 236
            ++    +G
Sbjct: 227 -EKDKFESG 234

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 52.4 bits (126), Expect = 5e-08
 Identities = 64/262 (24%), Positives = 107/262 (40%), Gaps = 43/262 (16%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-IA-DVQDNL-GQALACKLGEDVCYIHCD 57
           +  +  ++TG   GIG A +      G +V+ IA    D+  G+  AC L          
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFACDL---------- 50

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG------FASVLDTPKSDLDRVLAVNT 111
             ++ E T      + +   +D + NN GI           A++ D    DL+   AV  
Sbjct: 51  --ADIEQTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDV--YDLNVRAAVQV 106

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAE 168
           T  FL             +G I+   S        G+    +Y+ +K  ++   +  A E
Sbjct: 107 TQAFLEGMKLRE------QGRIVNICSRAIF----GALDRTSYSAAKSALVGCTRTWALE 156

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEA---FLSEMGNLRGQVLNAEGIANAALY 225
           L +YG+ VN V+P  + + +  +    P   E     L+ +   R  +   E +A A  +
Sbjct: 157 LAEYGITVNAVAPGPIETELFRQTR--PVGSEEEKRVLASIPMRR--LGTPEEVAAAIAF 212

Query: 226 LATDEASDVTGLNLVVDGGFSV 247
           L +D+A  +TG  L VDGG S+
Sbjct: 213 LLSDDAGFITGQVLGVDGGGSL 234

Length = 234

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 51.8 bits (125), Expect = 6e-08
 Identities = 44/177 (24%), Positives = 66/177 (37%), Gaps = 25/177 (14%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT 65
            I+ G    IG A A+L   +G +V+ A              G        D+T E  I 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA--------------GRSSGDYQVDITDEASIK 46

Query: 66  NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            L +      G  D + + AG  +  FA + +   +D  R L     G     +H    +
Sbjct: 47  ALFEKV----GHFDAIVSTAGDAE--FAPLAELTDADFQRGLNSKLLGQINLVRHGLPYL 100

Query: 126 IPQHKGCI-LFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
                G I L +          G+ A TV+   +   V+  A EL   G+R+N VSP
Sbjct: 101 ND--GGSITLTSGILAQRPIPGGAAAATVNG-ALEGFVRAAAIEL-PRGIRINAVSP 153

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 52.4 bits (126), Expect = 7e-08
 Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 32/192 (16%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCY--------IH 55
           K  +ITG +SGIG  AA      G +V+ A           C+  +DV          I 
Sbjct: 3   KSVLITGCSSGIGLEAALELKRRGYRVLAA-----------CRKPDDVARMNSLGFTGIL 51

Query: 56  CDVTSEDEITNLVDTAVA-KYGKLDIMYNNAGIVDRGFASVLDT-PKSDLDRVLAVNTTG 113
            D+   + +    D  +A    +L  ++NNAG    G    L T  +  +++  + N   
Sbjct: 52  LDLDDPESVERAADEVIALTDNRLYGLFNNAGF---GVYGPLSTISRQQMEQQFSTN--- 105

Query: 114 GFLGAKHAARV----MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
            F G      +    M+P  +G I+ T+S    I+  G  AY  SKY + A    L  EL
Sbjct: 106 -FFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMEL 164

Query: 170 RQYGLRVNCVSP 181
           R  G++V+ + P
Sbjct: 165 RHSGIKVSLIEP 176

Length = 256

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK AI+TGG SG+G    +   + GA V++   + ++ +     + + V  +  D+  
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-DGVEVVMLDLAD 82

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGI 87
            + +    +  +    ++DI+ NNAG+
Sbjct: 83  LESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 68/269 (25%), Positives = 100/269 (37%), Gaps = 83/269 (30%)

Query: 19  AAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GK 77
            A+L    GA+V+  D +          L     +I  D+     I    D AVA   G+
Sbjct: 1   TARLLRFLGARVIGVDRR-----EPGMTLDG---FIQADLGDPASI----DAAVAALPGR 48

Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK--GCILF 135
           +D ++N AG+             + ++ V  VN    FLG +H    ++P+    G I+ 
Sbjct: 49  IDALFNIAGV----------PGTAPVELVARVN----FLGLRHLTEALLPRMAPGGAIVN 94

Query: 136 TASACTEIAGIGSPA-------------------------------YTVSKYGIIALVKI 164
            AS    +AG   P                                Y +SK  +I     
Sbjct: 95  VAS----LAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150

Query: 165 LA-AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR--------GQVLN 215
            A       G+RVNCV+P G V          P IL  F S +G  R        G+   
Sbjct: 151 QAQPWFGARGIRVNCVAP-GPVF--------TP-ILGDFRSMLGQERVDSDAKRMGRPAT 200

Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGG 244
           A+  A   ++L +D A  + G+NL VDGG
Sbjct: 201 ADEQAAVLVFLCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 50.2 bits (121), Expect = 2e-07
 Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 11/118 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI--------ADVQDNLGQALACKLGEDVCYIH 55
              +ITGG  G+G A A+   E GA+ ++        A     L   L    G  V  + 
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELE-AAGARVTVVA 59

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           CDV   D +  ++    A  G L  + + AG++D     +          VLA    G
Sbjct: 60  CDVADRDALAAVLAAIPAVEGPLTGVIHAAGVLD--DGVLASLTPERFAAVLAPKAAG 115

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 5/117 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLG---EDVCYIHCDVT 59
              +ITG +SG+G AAAK     G   V+   +D L  +  A ++G   +    +HCD+ 
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           S D +   VD        LD +  NA +          T     +  + VN  G FL
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADG-FELTVGVNHLGHFL 117

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 34/265 (12%)

Query: 1   LEGKVAIITG--GASGIGAAAAKLFHENGAKVVIA--DVQDNLGQALACKLGEDVCYIHC 56
           LEGK  ++TG    S I    A++  E GA+VV+        L + +A +L E    +  
Sbjct: 5   LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLEL 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR-GFA-------SVLDTPKSDLDRVLA 108
           DVT+E+ + +L D        LD      G+V   GFA       + LD P  D+   L 
Sbjct: 65  DVTNEEHLASLADRVREHVDGLD------GVVHSIGFAPQSALGGNFLDAPWEDVATALH 118

Query: 109 VNTTGGFLGAKHAARVMIPQHKGCIL---FTASACTEIAGIGSPAY---TVSKYGIIALV 162
           V+       AK    +M     G I+   F A+       +  PAY    V+K  + +  
Sbjct: 119 VSAYSLKSLAKALLPLMNE--GGSIVGLDFDAT-------VAWPAYDWMGVAKAALESTN 169

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
           + LA +L   G+RVN V+  G +  ++++      +LE    E   L   V +   +A A
Sbjct: 170 RYLARDLGPRGIRVNLVAA-GPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARA 228

Query: 223 ALYLATDEASDVTGLNLVVDGGFSV 247
            + L +D     TG  + VDGG   
Sbjct: 229 VVALLSDWFPATTGEIVHVDGGAHA 253

Length = 256

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 50.8 bits (122), Expect = 2e-07
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 8/95 (8%)

Query: 1  LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHC 56
          L GK  +ITG + GIGAAAA+ F   G  + +     D  + L   L    G DV     
Sbjct: 5  LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHAL 64

Query: 57 DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG 91
          D++S +    L     A+ G +DI+ NNAG +  G
Sbjct: 65 DLSSPEAREQL----AAEAGDIDILVNNAGAIPGG 95

Length = 259

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.7 bits (121), Expect = 2e-07
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 27/263 (10%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L GK  ++TG AS   I    A+  H  GA++      D L    +  A +LG D+  + 
Sbjct: 4   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LP 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGG 114
           CDV  +  I  +       + K D      G V   GFA      + D D V AV   G 
Sbjct: 63  CDVAEDASIDAMFAELGKVWPKFD------GFVHSIGFAP---GDQLDGDYVNAVTREGF 113

Query: 115 FLGAKHAARVMIPQHKGC--ILFTASACTEIAGIGS----PAYTV---SKYGIIALVKIL 165
            +    ++   +   K C  +L   SA   ++ +G+    P Y V   +K  + A V+ +
Sbjct: 114 KIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYM 173

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           A  +   G+RVN +S  G +  +++    +   + A    +  +R + +  E + N+A +
Sbjct: 174 ANAMGPEGVRVNAISA-GPIRTLAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAF 231

Query: 226 LATDEASDVTGLNLVVDGGFSVA 248
           L +D ++ ++G  + VDGGFS+A
Sbjct: 232 LCSDLSAGISGEVVHVDGGFSIA 254

Length = 262

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 71/267 (26%), Positives = 105/267 (39%), Gaps = 33/267 (12%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTS 60
           +V ++ G A GIG A A+     G KV++AD  +   +A A  L   G DV     DV+S
Sbjct: 3   EVVVVIG-AGGIGQAIARRV-GAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + +  L  TA    G +  + + AG V    AS     K DL     V    G + A  
Sbjct: 61  RESVKALAATAQT-LGPVTGLVHTAG-VSPSQASPEAILKVDLYGTALVLEEFGKVIAPG 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSP--------------------AYTVSKYGIIA 160
            A V+I    G  L   +A  E A   +P                    AY ++K     
Sbjct: 119 GAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIAKRANAL 178

Query: 161 LVKILAAELRQYGLRVNCVSPYGLVS---GISSRNSINPAILEAFLSEMGNLRGQVLNAE 217
            V   A +  + G R+N +SP G++S        N           ++     G+    +
Sbjct: 179 RVMAEAVKWGERGARINSISP-GIISTPLAQDELNGPRGDGYRNMFAKSPA--GRPGTPD 235

Query: 218 GIANAALYLATDEASDVTGLNLVVDGG 244
            IA  A +L     S +TG + +VDGG
Sbjct: 236 EIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 66/259 (25%), Positives = 101/259 (38%), Gaps = 38/259 (14%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCD 57
           GK  IITG  +GIG   A+     GA+V++A       +  A ++       +V   H D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS----DLDRVLAVNTTG 113
           + S   I       +A+  +LD++ NNAG        V+  P S      +    VN  G
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAG--------VMRCPYSKTEDGFEMQFGVNHLG 112

Query: 114 GFL---------GAKHAARVM----IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA 160
            FL              +R++    +    G I F     +E +     AY  SK   + 
Sbjct: 113 HFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINF-DDLNSEKSYNTGFAYCQSKLANVL 171

Query: 161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL--NAEG 218
             + LA  L+  G+ VN + P G+V     R++    I   FLS + N            
Sbjct: 172 FTRELARRLQGTGVTVNALHP-GVVRTELGRHT---GIHHLFLSTLLNPLFWPFVKTPRE 227

Query: 219 IANAALYLATDEA-SDVTG 236
            A  ++YLA  E    V+G
Sbjct: 228 GAQTSIYLALAEELEGVSG 246

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 21/190 (11%)

Query: 4   KVAIITGGASGIG-AAAAKLFHENGAKV-VIADV-----QDNLGQALACKLGEDVCYIHC 56
            V +ITG +SGIG   A +L  +   +  V A +     +  L +A     G  +  +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD-LDRVLAVNTTGGF 115
           DV     +   V+        +D++  NAG+   G    L+    D +  V  VN     
Sbjct: 61  DVCDSKSVAAAVERV--TERHVDVLVCNAGV---GLLGPLEALSEDAMASVFDVN----V 111

Query: 116 LGAKHAARVMIPQHK----GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
            G     +  +P  K    G IL T+S         +  Y  SK+ +  L + LA +L  
Sbjct: 112 FGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLP 171

Query: 172 YGLRVNCVSP 181
           + + ++ +  
Sbjct: 172 FNVHLSLIEC 181

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 10/187 (5%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI 64
           + ++TG  +G G    + F + G KV+    +    Q L  +LG+++     DV +   I
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAI 61

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
             ++ +  A++  +D++ NNAG+   G          D + ++  N  G     +     
Sbjct: 62  EEMLASLPAEWRNIDVLVNNAGLA-LGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPG 120

Query: 125 MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI----LAAELRQYGLRVNCVS 180
           M+ ++ G I+   S        G   Y  +K    A V+     L  +L    +RV  + 
Sbjct: 121 MVERNHGHIINIGSTAGSWPYAGGNVYGATK----AFVRQFSLNLRTDLHGTAVRVTDIE 176

Query: 181 PYGLVSG 187
           P GLV G
Sbjct: 177 P-GLVGG 182

Length = 248

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 48/192 (25%), Positives = 74/192 (38%), Gaps = 35/192 (18%)

Query: 8   ITGGASGIGAAAAKLFHENGAKVVI--------ADVQDNLGQALACKLGEDVCYIHCDVT 59
           ITG + G+G AAA+     G +VV+        AD +     A    +G        D++
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG--------DLS 63

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           S  E   L D   A  G+ D + +NAGI+        DT    +  ++AVN    ++   
Sbjct: 64  SLAETRKLADQVNA-IGRFDAVIHNAGILSGPNRKTPDT---GIPAMVAVNVLAPYV--- 116

Query: 120 HAARVMIPQ---------HKGCIL-FTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
             A +  P+         H+G                 SPAY+ SK  ++ L   +A   
Sbjct: 117 LTALIRRPKRLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAVAR-- 174

Query: 170 RQYGLRVNCVSP 181
           R   +  N V P
Sbjct: 175 RWKDVSSNAVHP 186

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 46.4 bits (110), Expect = 5e-06
 Identities = 55/246 (22%), Positives = 96/246 (39%), Gaps = 13/246 (5%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI 64
           +A++T      G A+A+   E+G  VV  D   +   A   +  E          SE + 
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHD--ASFADAAERQAFESE-NPGTKALSEQKP 59

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
             LVD  +   G +D++ +N   + R    +  T ++D+ +     +   F   + A   
Sbjct: 60  EELVDAVLQAGGAIDVLVSN-DYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQAAIAQ 118

Query: 125 MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGL 184
           M     G I+F  SA  +     +  Y  ++   +AL + LA EL +  + V  + P   
Sbjct: 119 MKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPNFF 178

Query: 185 VSGI---SSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
            S     +S    NP + E    +  +G L         +A    +LA+  A  +TG   
Sbjct: 179 NSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVA----FLASRRADPITGQFF 234

Query: 240 VVDGGF 245
              GG+
Sbjct: 235 AFAGGY 240

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 46.0 bits (109), Expect = 7e-06
 Identities = 29/85 (34%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 7  IITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGE--DVCYIHCDVTSEDE 63
          ++T  + GIG   A+   + GA+VVI+   ++NL +AL  +L E  +V  +  D++ +D+
Sbjct: 4  LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALK-ELKEYGEVYAVKADLSDKDD 62

Query: 64 ITNLVDTAVAKYGKLDIMYNNAGIV 88
          + NLV  A    G +D +  NAG V
Sbjct: 63 LKNLVKEAWELLGGIDALVWNAGNV 87

Length = 259

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 44.9 bits (106), Expect = 2e-05
 Identities = 51/215 (23%), Positives = 79/215 (36%), Gaps = 29/215 (13%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC-----D 57
           GKV IITG  SGIG   A+ F  +GA V++A    +   A   ++ E+           D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF-- 115
           + S   +    +   AK   L ++  NA +    FA      +  L+    VN  G F  
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAV----FALPWTLTEDGLETTFQVNHLGHFYL 116

Query: 116 -------LGAKHAARVMI---PQHKGCILFTASACTEIAGIGSP--------AYTVSKYG 157
                  L     ARV++     H+   L  +    + + +  P        AY  +K  
Sbjct: 117 VQLLEDVLRRSAPARVIVVSSESHRFTDLPDSCGNLDFSLLSPPKKKYWSMLAYNRAKLC 176

Query: 158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN 192
            I     L   L   G+  N + P  ++     RN
Sbjct: 177 NILFSNELHRRLSPRGITSNSLHPGNMMYSSIHRN 211

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.6 bits (105), Expect = 2e-05
 Identities = 64/261 (24%), Positives = 113/261 (43%), Gaps = 26/261 (9%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKV-------VIADVQDNLGQALACKLGEDV 51
           L+GK  +ITG A+   I  A A+L  ++GA++       V+      L + + C    ++
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSEL 65

Query: 52  CYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGF--ASVLDTPKSDLDRVLAV 109
                DVT+   I+NL D    K+G  D + +     D+       +DT   +    L +
Sbjct: 66  -----DVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHI 120

Query: 110 NTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT---VSKYGIIALVKILA 166
           +       ++ A  +M   H G  + T +       I  P Y    V+K  + A VK LA
Sbjct: 121 SCYSLLELSRSAEALM---HDGGSIVTLTYYGAEKVI--PNYNVMGVAKAALEASVKYLA 175

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
            ++ +  +RVN +S   + +  SS       +L++  +     R      E +  AA+YL
Sbjct: 176 NDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTT--QEDVGGAAVYL 233

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
            ++ +  VTG    VD G+++
Sbjct: 234 FSELSKGVTGEIHYVDCGYNI 254

Length = 260

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 44.5 bits (105), Expect = 3e-05
 Identities = 65/264 (24%), Positives = 108/264 (40%), Gaps = 32/264 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGE---DVCYIHC 56
           L GK+A  T  + GIG   A++    GA V++ +  ++NL +A      E   DV YI  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL------AVN 110
           D+T  +++   V   +   G+ DI + + G    G+   ++    D +  +      AV 
Sbjct: 66  DLTKREDLERTV-KELKNIGEPDIFFFSTGGPKPGY--FMEMSMEDWEGAVKLLLYPAVY 122

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
            T   + A      M  +  G I+++ S   +          V +  +  LV+ LA EL 
Sbjct: 123 LTRALVPA------MERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELG 176

Query: 171 QYGLRVNCVSP--------YGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIA 220
             G+ VN + P          L    + R   +   +E  L E       G++   E I 
Sbjct: 177 PKGITVNGIMPGIIRTDRVIQLAQDRAKREGKS---VEEALQEYAKPIPLGRLGEPEEIG 233

Query: 221 NAALYLATDEASDVTGLNLVVDGG 244
               +LA+D  S + G  + VDGG
Sbjct: 234 YLVAFLASDLGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 41.7 bits (98), Expect = 1e-04
 Identities = 36/177 (20%), Positives = 61/177 (34%), Gaps = 45/177 (25%)

Query: 6   AIITGGASGIGAAAAK-LFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI 64
            ++TGG+ GIG A A+ L      KV++                                
Sbjct: 1   VLVTGGSGGIGGAIARWLASRGSPKVLVVS------------------------------ 30

Query: 65  TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV 124
                       + D++ +NA I+D G   ++D   S ++R +  N  G     + A  +
Sbjct: 31  ------------RRDVVVHNAAILDDG--RLIDLTGSRIERAIRANVVGTRRLLEAAREL 76

Query: 125 MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           M  +  G  +  +S        G   Y  SK  +  L +  A+E    GL    V+ 
Sbjct: 77  MKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVAC 133

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 6/71 (8%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIAD------VQDNLGQALACKLGEDVCYIHCD 57
             +ITGGA  IG+  A+ F + G +V+  D         NL    A +    V ++H D
Sbjct: 1  MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60

Query: 58 VTSEDEITNLV 68
          + + +++ +L 
Sbjct: 61 IRNRNDLEDLF 71

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 41.1 bits (96), Expect = 4e-04
 Identities = 43/186 (23%), Positives = 61/186 (32%), Gaps = 35/186 (18%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITN 66
           ++TGGA  IG+   +     G  V   D      +     L   V ++  D+T  D +  
Sbjct: 4   LVTGGAGFIGSHLVERLLAAGHDVRGLD----RLRDGLDPLLSGVEFVVLDLTDRDLVDE 59

Query: 67  LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI 126
           L           D + + A        SV D+  SD    L VN      G  +      
Sbjct: 60  LAKGVP------DAVIHLAAQS-----SVPDSNASDPAEFLDVN----VDGTLNLLEAAR 104

Query: 127 PQHKGCILFTASA-----------CTEIAGIGSP--AYTVSKYGIIALVKILAAELRQYG 173
                  +F +S              E  G   P   Y VSK    A  ++L A  R YG
Sbjct: 105 AAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKL---AAEQLLRAYARLYG 161

Query: 174 LRVNCV 179
           L V  +
Sbjct: 162 LPVVIL 167

Length = 314

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 6/86 (6%)

Query: 7  IITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLG---EDVCYIHCDVTSED 62
          IITG +SG+G A AK   E G   V+   +D L  +  A   G   +    +H D+ S D
Sbjct: 1  IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD 60

Query: 63 EITNLVDTAVAKYGK-LDIMYNNAGI 87
           +   VD    + G+ LD++  NA +
Sbjct: 61 SVRQFVDN-FRRSGRPLDVLVCNAAV 85

Length = 308

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 44/200 (22%), Positives = 75/200 (37%), Gaps = 30/200 (15%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTS 60
             +ITG  SGIG   A  + + G +V+       V D L    A     ++  +  DVT 
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSA-----NIFTLAFDVTD 57

Query: 61  EDEITNLV-------DTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
                  +       +  +   G  D  Y + G VD             + RV  VN  G
Sbjct: 58  HPGTKAALSQLPFIPELWIFNAG--DCEYMDDGKVDATL----------MARVFNVNVLG 105

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
                +     +   H+  ++   S  +E+A   + AY  SK  +    + L  +LR  G
Sbjct: 106 VANCIEGIQPHLSCGHR--VVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKG 163

Query: 174 LRVNCVSPYGLVSGISSRNS 193
           + V  V P  + + ++ +N+
Sbjct: 164 IEVVTVFPGFVATPLTDKNT 183

Length = 240

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 65/262 (24%), Positives = 106/262 (40%), Gaps = 17/262 (6%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQAL---ACKLGEDVCYIH 55
           L GK  +ITG  S   I    AK     GA++    V D     +   A + G D+ +  
Sbjct: 4   LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVF-P 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTG 113
           CDV S+++I  L  +    +  LD + ++ G   R   +   LD    +  R+    +  
Sbjct: 63  CDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAY 122

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT---VSKYGIIALVKILAAELR 170
            F     AA  M+      +  +      +     P Y    ++K  + A V+ LA  L 
Sbjct: 123 SFPALAKAALPMLSDDASLLTLSYLGAERVV----PNYNTMGLAKASLEASVRYLAVSLG 178

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
             G+R N +S  G +  +++    +   +  F+     LR  V   E + N A +L +D 
Sbjct: 179 PKGIRANGISA-GPIKTLAASGIKDFGKILDFVESNAPLRRNV-TIEEVGNVAAFLLSDL 236

Query: 231 ASDVTGLNLVVDGGFSVANPSL 252
           AS VTG    VD GF+     +
Sbjct: 237 ASGVTGEITHVDSGFNAVVGGM 258

Length = 260

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKLGEDVCYIHCDVTSED 62
          +  IITG + G+G A A    E G  V+ I+  ++     LA +   ++ +   D+    
Sbjct: 2  RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVH 61

Query: 63 EITNL---VDTAVAKYGKLDI-MYNNAGIVD 89
          E+      + +++ +     I + NNAG+V 
Sbjct: 62 ELETNFNEILSSIQEDNVSSIHLINNAGMVA 92

Length = 251

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 11/118 (9%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLG---EDVCYIHCDVTSE 61
            IITG +SG+G  AAK     G   VI   +D L  +  A  LG   +    +H D+ S 
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL 65

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPK---SDLDRVLAVNTTGGFL 116
           D +   V         LD +  NA +    +      P+      +  +  N  G FL
Sbjct: 66  DSVRQFVQQFRESGRPLDALVCNAAV----YFPTAKEPRFTADGFELSVGTNHLGHFL 119

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 27/204 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-------------LACKL 47
           L GKVA++ G   G G   A      GA V +        ++             L    
Sbjct: 6   LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP--KSDLD- 104
           G     +  D    +++  LV+    + G+LDI+ N+    ++ F      P  +  LD 
Sbjct: 66  GGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLF--EWGKPVWEHSLDK 123

Query: 105 --RVL--AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG---SPAYTVSKYG 157
             R+L  A++T    + +  A  ++I +  G ++       E        S  Y ++K  
Sbjct: 124 GLRMLRLAIDTH--LITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTS 181

Query: 158 IIALVKILAAELRQYGLRVNCVSP 181
           +  L   LA EL  +G     ++P
Sbjct: 182 VNRLAFSLAHELAPHGATAVALTP 205

Length = 305

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 13/130 (10%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKV-VIADVQDNLGQA---LACKLGEDVCYIH-CD 57
           G+  +ITG  SGIG AAA    + G  V ++   Q    +A   +  + G    ++H  D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++   ++   V+    +  KL ++ NNAG +     +  +  +  L++  A NT G ++ 
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCM----VNKRELTEDGLEKNFATNTLGTYIL 116

Query: 118 AKHAARVMIP 127
             H    +IP
Sbjct: 117 TTH----LIP 122

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 38.1 bits (89), Expect = 0.004
 Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 5/92 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           L GK A++TG + G+G   A+     GA+V++       G+A    +        +    
Sbjct: 12  LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRA 71

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI 87
            D++S   +  L +   A+   + ++ NNAG+
Sbjct: 72  LDLSSLASVAALGEQLRAEGRPIHLLINNAGV 103

Length = 313

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	302
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.98
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.98
PRK08177	225	short chain dehydrogenase; Provisional	99.97
PRK08264	238	short chain dehydrogenase; Validated	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK08219	227	short chain dehydrogenase; Provisional	99.96
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.95
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.95
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.95
PLN02214	342	cinnamoyl-CoA reductase	99.94
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.93
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.93
PLN02650	351	dihydroflavonol-4-reductase	99.93
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.93
PLN03209	576	translocon at the inner envelope of chloroplast su	99.93
PLN02583	297	cinnamoyl-CoA reductase	99.93
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.92
PLN02572	442	UDP-sulfoquinovose synthase	99.92
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.92
PLN00198	338	anthocyanidin reductase; Provisional	99.92
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.92
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.91
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.91
PLN02653	340	GDP-mannose 4,6-dehydratase	99.91
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.9
PLN02686	367	cinnamoyl-CoA reductase	99.89
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.89
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.89
PLN02240	352	UDP-glucose 4-epimerase	99.89
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.89
PLN02427	386	UDP-apiose/xylose synthase	99.88
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.88
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.88
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.87
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.87
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.87
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.87
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.86
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.86
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.86
PLN02260	668	probable rhamnose biosynthetic enzyme	99.85
PLN02206	442	UDP-glucuronate decarboxylase	99.85
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.85
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.85
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.84
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.84
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.84
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.83
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.83
PRK06720	169	hypothetical protein; Provisional	99.82
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.82
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.81
CHL00194	317	ycf39 Ycf39; Provisional	99.81
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.8
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.79
PLN02996	491	fatty acyl-CoA reductase	99.77
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.77
PRK07201	657	short chain dehydrogenase; Provisional	99.75
PRK05865	854	hypothetical protein; Provisional	99.74
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.73
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.71
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.68
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.68
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.68
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.67
PLN02778	298	3,5-epimerase/4-reductase	99.66
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.65
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.64
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.64
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.61
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.59
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.58
PLN00016	378	RNA-binding protein; Provisional	99.58
PRK12320	699	hypothetical protein; Provisional	99.56
PLN02503	605	fatty acyl-CoA reductase 2	99.53
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.52
PLN02260	668	probable rhamnose biosynthetic enzyme	99.49
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.47
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.42
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.36
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.31
PRK08309	177	short chain dehydrogenase; Provisional	99.31
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.29
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.24
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.23
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.14
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.07
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.94
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.91
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.82
COG2910	211	Putative NADH-flavin reductase [General function p	98.81
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.75
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.65
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.65
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.62
KOG2774	366	consensus NAD dependent epimerase [General functio	98.6
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.57
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.54
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.47
PRK09620	229	hypothetical protein; Provisional	98.46
PLN00106	323	malate dehydrogenase	98.42
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.41
PTZ00325	321	malate dehydrogenase; Provisional	98.36
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	98.35
KOG4288	283	consensus Predicted oxidoreductase [General functi	98.22
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.19
PRK14982	340	acyl-ACP reductase; Provisional	98.17
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.16
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.1
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.94
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.93
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.92
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.82
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.72
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.65
COG3268	382	Uncharacterized conserved protein [Function unknow	97.64
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.63
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.62
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.6
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.58
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.57
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.57
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.56
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.52
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.51
PRK06849	389	hypothetical protein; Provisional	97.48
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.46
PRK05086	312	malate dehydrogenase; Provisional	97.46
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.41
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.31
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.29
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.27
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.26
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.19
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.14
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.12
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.12
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.08
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.08
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.08
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.07
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.07
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.06
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.06
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.02
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.02
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.95
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.94
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.92
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.91
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.91
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.9
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.86
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.86
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.86
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.86
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.85
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.82
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.79
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.77
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.76
PRK09496	453	trkA potassium transporter peripheral membrane com	96.75
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.72
PLN00203	519	glutamyl-tRNA reductase	96.7
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.69
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.67
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.64
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.61
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.61
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.6
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.57
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.56
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.54
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.53
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.52
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.49
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.48
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.47
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.45
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.45
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.41
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.4
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	96.37
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.34
PRK04148	134	hypothetical protein; Provisional	96.33
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.3
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.27
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.2
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.18
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.1
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.1
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.07
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.06
PRK05442	326	malate dehydrogenase; Provisional	96.05
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.04
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.03
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	96.01
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.0
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	95.98
PRK09496	453	trkA potassium transporter peripheral membrane com	95.94
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	95.94
PLN02586	360	probable cinnamyl alcohol dehydrogenase	95.94
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.93
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.92
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	95.92
PRK08655	437	prephenate dehydrogenase; Provisional	95.89
PLN02928	347	oxidoreductase family protein	95.85
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.85
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.81
PLN02178	375	cinnamyl-alcohol dehydrogenase	95.81
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.8
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	95.78
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.76
PLN02494	477	adenosylhomocysteinase	95.75
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.74
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.74
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	95.73
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	95.73
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.72
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.68
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	95.67
PTZ00117	319	malate dehydrogenase; Provisional	95.67
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	95.64
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.61
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.61
PRK14968	188	putative methyltransferase; Provisional	95.59
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.59
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	95.59
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.56
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	95.54
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.54
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.5
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.5
PTZ00354	334	alcohol dehydrogenase; Provisional	95.49
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.48
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	95.48
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	95.45
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	95.44
PLN02740	381	Alcohol dehydrogenase-like	95.41
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.41
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.4
PRK08223	287	hypothetical protein; Validated	95.38
PRK12480	330	D-lactate dehydrogenase; Provisional	95.35
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	95.32
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	95.31
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.31
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.31
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.29
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.28
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.25
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	95.22
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.21
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.21
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	95.19
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.19
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	95.19
PLN02602	350	lactate dehydrogenase	95.17
PRK13243	333	glyoxylate reductase; Reviewed	95.14
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.13
PRK10669	558	putative cation:proton antiport protein; Provision	95.1
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.08
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.04
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.03
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.01
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.99
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	94.97
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.95
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	94.9
PRK08328	231	hypothetical protein; Provisional	94.87
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	94.87
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	94.86
PRK00048	257	dihydrodipicolinate reductase; Provisional	94.86
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	94.85
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	94.84
PLN02827	378	Alcohol dehydrogenase-like	94.81
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	94.8
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	94.76
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	94.76
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.71
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	94.69
TIGR02130	275	dapB_plant dihydrodipicolinate reductase. This nar	94.68
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	94.67
PLN02514	357	cinnamyl-alcohol dehydrogenase	94.67
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	94.67
PRK13771	334	putative alcohol dehydrogenase; Provisional	94.64
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	94.62
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	94.61
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.57

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=1.2e-47  Score=302.68  Aligned_cols=240  Identities=35%  Similarity=0.522  Sum_probs=218.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.|.++||||++|||++++..|+++|++|.+.+++...+++....+++  +...|.||++++++++..+++..+.+|+++
T Consensus        13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps   92 (256)
T KOG1200|consen   13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS   92 (256)
T ss_pred             hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence            578999999999999999999999999999999999999888888864  678899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc--cCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI--PQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~--~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +||||||+..+  ..+.....++|++.+.+|+.|.|++++++.+.|.  .+.+.+||++||+-+..++.+...|++||.+
T Consensus        93 vlVncAGItrD--~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~G  170 (256)
T KOG1200|consen   93 VLVNCAGITRD--GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGG  170 (256)
T ss_pred             EEEEcCccccc--cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCc
Confidence            99999999876  4777889999999999999999999999999843  3345599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +..|+|+.++|++++|||||+|.||++.|||+...  ++....+...-+  |.++++.+||+|+.++||+|+.++|+||+
T Consensus       171 vIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~i--Pmgr~G~~EevA~~V~fLAS~~ssYiTG~  246 (256)
T KOG1200|consen  171 VIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMI--PMGRLGEAEEVANLVLFLASDASSYITGT  246 (256)
T ss_pred             eeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccC--CccccCCHHHHHHHHHHHhccccccccce
Confidence            99999999999999999999999999999999876  455555555443  34999999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .+.++||+.+
T Consensus       247 t~evtGGl~m  256 (256)
T KOG1200|consen  247 TLEVTGGLAM  256 (256)
T ss_pred             eEEEeccccC
Confidence            9999999753

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.4e-45  Score=316.81  Aligned_cols=241  Identities=24%  Similarity=0.273  Sum_probs=205.7

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||+++||||+  +|||++++++|+++|++|++++|+.+ ..+..+++ +..+.++++|++|+++++++++++.+++++
T Consensus         5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR-MKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGK   83 (252)
T ss_pred             cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH-HHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            579999999999  89999999999999999999999843 33333333 346788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +|+||||||+....  ..++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||.++..+.+++..|++||
T Consensus        84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asK  161 (252)
T PRK06079         84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAK  161 (252)
T ss_pred             CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHH
Confidence            99999999986421  146778899999999999999999999999999954  58999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +|+++|+++++.|++++||+||+|+||+|.|++.......++..+.+... . +.+++.+|+|+|+++.||+++...+++
T Consensus       162 aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~pedva~~~~~l~s~~~~~it  239 (252)
T PRK06079        162 AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSR-T-VDGVGVTIEEVGNTAAFLLSDLSTGVT  239 (252)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhc-C-cccCCCCHHHHHHHHHHHhCccccccc
Confidence            99999999999999999999999999999999764432222333333222 2 347899999999999999999899999


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |+++.+|||+.
T Consensus       240 G~~i~vdgg~~  250 (252)
T PRK06079        240 GDIIYVDKGVH  250 (252)
T ss_pred             ccEEEeCCcee
Confidence            99999999964

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-45  Score=318.22  Aligned_cols=242  Identities=22%  Similarity=0.287  Sum_probs=209.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+.+    +.++.++.+|++|+++++++++++. +++
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~g   84 (263)
T PRK08339          6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NIG   84 (263)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hhC
Confidence            57999999999999999999999999999999999987776665544    4568899999999999999999985 589


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||.++..+.+++..|+++|+
T Consensus        85 ~iD~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKa  162 (263)
T PRK08339         85 EPDIFFFSTGGPKP--GYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI  162 (263)
T ss_pred             CCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHH
Confidence            99999999997643  4677889999999999999999999999999998777899999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------IN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      |++.|++.++.|++++||+||+|+||+|.|++.....        .. ++..+.+. .. .+.+++.+|+|+|++++||+
T Consensus       163 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~p~~r~~~p~dva~~v~fL~  240 (263)
T PRK08339        163 SMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA-KP-IPLGRLGEPEEIGYLVAFLA  240 (263)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh-cc-CCcccCcCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999754210        01 12222222 22 23488999999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++...+++|+++.+|||+..
T Consensus       241 s~~~~~itG~~~~vdgG~~~  260 (263)
T PRK08339        241 SDLGSYINGAMIPVDGGRLN  260 (263)
T ss_pred             cchhcCccCceEEECCCccc
Confidence            99899999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-45  Score=314.46  Aligned_cols=242  Identities=33%  Similarity=0.491  Sum_probs=207.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.. ...+..+..+.++.++.+|++|+++++++++++.+.++++|
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57899999999999999999999999999999988643 22223333456788999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||....  .++.+.+.++|++++++|+.++++++++++++|.+++ .|+||++||.++..+.++...|++||+++
T Consensus        86 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~  163 (251)
T PRK12481         86 ILINNAGIIRR--QDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAV  163 (251)
T ss_pred             EEEECCCcCCC--CCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHH
Confidence            99999998654  4677888999999999999999999999999997654 58999999999988888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.|++++||+||+|+||++.|++.......+...+......  +.+++.+|+|+|+++.||+++...+++|+.
T Consensus       164 ~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--p~~~~~~peeva~~~~~L~s~~~~~~~G~~  241 (251)
T PRK12481        164 MGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERI--PASRWGTPDDLAGPAIFLSSSASDYVTGYT  241 (251)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCccccCcCCce
Confidence            999999999999999999999999999998654322222222333332  347899999999999999999899999999


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.+|||+.
T Consensus       242 i~vdgg~~  249 (251)
T PRK12481        242 LAVDGGWL  249 (251)
T ss_pred             EEECCCEe
Confidence            99999964

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-44  Score=316.10  Aligned_cols=243  Identities=21%  Similarity=0.261  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+..   ..+++.++++.. .++++|++|+++++++++++.+++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~   81 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL   81 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc
Confidence            579999999997  89999999999999999999999853   333444444444 678999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|+||||||+....  ..++.+.+.++|+++|++|+.+++++++.++|.|.+  .|+||++||.++..+.+++..|++
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~a  159 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGV  159 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhh
Confidence            9999999999975421  246778899999999999999999999999999964  489999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|+++|+++++.|++++||+||+|+||+|.|++..... .......+.... .+.+++.+|+|+|++++||+++...+
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~-~pl~r~~~pedva~~v~fL~s~~~~~  237 (274)
T PRK08415        160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG-DFRMILKWNEIN-APLKKNVSIEEVGNSGMYLLSDLSSG  237 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc-hhhHHhhhhhhh-CchhccCCHHHHHHHHHHHhhhhhhc
Confidence            9999999999999999999999999999999998754321 111111222222 23478999999999999999998899


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+.+.+|||+.+.
T Consensus       238 itG~~i~vdGG~~~~  252 (274)
T PRK08415        238 VTGEIHYVDAGYNIM  252 (274)
T ss_pred             ccccEEEEcCccccc
Confidence            999999999998754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-44  Score=315.93  Aligned_cols=243  Identities=25%  Similarity=0.336  Sum_probs=203.0

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHH---HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++  |||++++++|+++|++|++++|+....+   ++.+..+ ...++++|++|+++++++++++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g-~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG-SDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC-CceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5799999999997  9999999999999999999998754332   2222233 23578999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|+||||||+....  ..++.+.+.++|++++++|+.++++++++++|+|.+  .|+||++||.++..+.+++..|++
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  161 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGV  161 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhh
Confidence            9999999999976421  135677889999999999999999999999999963  489999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|++.|++.++.|++++||+||+|+||++.|++..... ............. +.+++.+|+|+|++++||+++...+
T Consensus       162 sKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~-~~~~~~~~~~~~~-p~~r~~~peeva~~~~fL~s~~~~~  239 (271)
T PRK06505        162 AKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG-DARAIFSYQQRNS-PLRRTVTIDEVGGSALYLLSDLSSG  239 (271)
T ss_pred             hHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc-chHHHHHHHhhcC-CccccCCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999999999999754321 1111112222222 3478899999999999999998999


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+.+.+|||+.+.
T Consensus       240 itG~~i~vdgG~~~~  254 (271)
T PRK06505        240 VTGEIHFVDSGYNIV  254 (271)
T ss_pred             cCceEEeecCCcccC
Confidence            999999999997644

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2e-44  Score=297.59  Aligned_cols=225  Identities=30%  Similarity=0.409  Sum_probs=203.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|+++|||||+|||.++|++|+++|++|++++|+.++++++..+++ ..+..+..|++|.++++++++.+.++++++|
T Consensus         4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD   83 (246)
T COG4221           4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID   83 (246)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence            368999999999999999999999999999999999999999999997 5789999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||.+..  .++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|.||++||+++..++++.+.|+++|+++.
T Consensus        84 iLvNNAGl~~g--~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~  161 (246)
T COG4221          84 ILVNNAGLALG--DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVR  161 (246)
T ss_pred             EEEecCCCCcC--ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHH
Confidence            99999999875  6899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC--HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN--PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      .|+..|+.|+..++|||..|.||.+.|..+......  .+..+..+..     ...++|+|+|+++.|+++.+..
T Consensus       162 ~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~-----~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         162 AFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG-----GTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc-----CCCCCHHHHHHHHHHHHhCCCc
Confidence            999999999999999999999999987765544322  2222232222     4478999999999999986654

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.3e-44  Score=310.74  Aligned_cols=244  Identities=25%  Similarity=0.285  Sum_probs=202.6

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccH---HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++  |||++++++|+++|++|++++|+...   .+++.+..+. ..++++|++|+++++++++++.+++
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHc
Confidence            5789999999997  99999999999999999999887422   2222222232 3467899999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|+||||||.....  ..++.+.+.++|++++++|+.+++.+++.+.|.|.+  .|+||++||.++..+.+++..|++
T Consensus        85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~a  162 (260)
T PRK06603         85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGV  162 (260)
T ss_pred             CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhh
Confidence            9999999999975421  136678889999999999999999999999999953  589999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|++.|+++++.|++++||+||+|+||++.|++.......++..+..... . +.+++.+|+|+|++++||+++...+
T Consensus       163 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~pedva~~~~~L~s~~~~~  240 (260)
T PRK06603        163 AKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAAT-A-PLKRNTTQEDVGGAAVYLFSELSKG  240 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhc-C-CcCCCCCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999999999999754321112222222222 2 3478899999999999999998999


Q ss_pred             ccccEEeeCCCcccCC
Q 044670          234 VTGLNLVVDGGFSVAN  249 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~  249 (302)
                      ++|+.+.+|||+.+..
T Consensus       241 itG~~i~vdgG~~~~~  256 (260)
T PRK06603        241 VTGEIHYVDCGYNIMG  256 (260)
T ss_pred             CcceEEEeCCcccccC
Confidence            9999999999977643

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-44  Score=309.70  Aligned_cols=244  Identities=32%  Similarity=0.444  Sum_probs=211.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+++..++..+.+     +.++.++.+|++|+++++++++++.+++
T Consensus         5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (260)
T PRK07063          5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF   84 (260)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999988777666554     3467889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||....  .+..+.+.++|++++++|+.++++++++++|.|.+++.++||++||..+..+.++..+|++||
T Consensus        85 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  162 (260)
T PRK07063         85 GPLDVLVNNAGINVF--ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAK  162 (260)
T ss_pred             CCCcEEEECCCcCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHH
Confidence            999999999997643  355677889999999999999999999999999877778999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      ++++.+++.++.|++++||+||+|+||++.|++.....   ..+........... +.+++.+|+|+|++++||+++...
T Consensus       163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~va~~~~fl~s~~~~  241 (260)
T PRK07063        163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ-PMKRIGRPEEVAMTAVFLASDEAP  241 (260)
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999864321   11121112222222 347899999999999999999889


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.+.+|||...
T Consensus       242 ~itG~~i~vdgg~~~  256 (260)
T PRK07063        242 FINATCITIDGGRSV  256 (260)
T ss_pred             ccCCcEEEECCCeee
Confidence            999999999999764

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-43  Score=306.49  Aligned_cols=246  Identities=35%  Similarity=0.452  Sum_probs=212.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.++.++.++.+|++|+++++++++++.+.++++|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            47899999999999999999999999999999999988777777776677889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .. .+.+.++|++.+++|+.+++++++.+.+.|. ++.++||++||.++..+.+++..|++||++++.
T Consensus        84 lv~~ag~~~~--~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~  159 (261)
T PRK08265         84 LVNLACTYLD--DG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQ  159 (261)
T ss_pred             EEECCCCCCC--Cc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence            9999997643  12 3567899999999999999999999999997 557899999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +++.++.|+.++||+||+|+||++.|++....... .......... ..+.+++.+|+|+|++++||+++...+++|+.+
T Consensus       160 ~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~dva~~~~~l~s~~~~~~tG~~i  238 (261)
T PRK08265        160 LTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAP-FHLLGRVGDPEEVAQVVAFLCSDAASFVTGADY  238 (261)
T ss_pred             HHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcc-cCCCCCccCHHHHHHHHHHHcCccccCccCcEE
Confidence            99999999999999999999999999986543211 1111122111 123478999999999999999988899999999


Q ss_pred             eeCCCcccCCCC
Q 044670          240 VVDGGFSVANPS  251 (302)
Q Consensus       240 ~~~gG~~~~~~~  251 (302)
                      .+|||+.+..++
T Consensus       239 ~vdgg~~~~~~~  250 (261)
T PRK08265        239 AVDGGYSALGPE  250 (261)
T ss_pred             EECCCeeccCCC
Confidence            999998866554

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-43  Score=306.25  Aligned_cols=242  Identities=23%  Similarity=0.327  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccH---HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+.   .+++.++++ ...++.+|++|+++++++++++.+++
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   86 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD-APIFLPLDVREPGQLEAVFARIAEEW   86 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc-cceEEecCcCCHHHHHHHHHHHHHHc
Confidence            579999999998  599999999999999999999998643   233333333 34678999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|++|||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|.+  .++||++||.++..+.+++..|++
T Consensus        87 g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~a  164 (258)
T PRK07533         87 GRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGP  164 (258)
T ss_pred             CCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHH
Confidence            9999999999975421  246677889999999999999999999999999953  589999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|+++|++.++.|++++||+||+|+||++.|++.......++..+.+... . +.+++.+|+|+|++++||+++...+
T Consensus       165 sKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~p~dva~~~~~L~s~~~~~  242 (258)
T PRK07533        165 VKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAER-A-PLRRLVDIDDVGAVAAFLASDAARR  242 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhc-C-CcCCCCCHHHHHHHHHHHhChhhcc
Confidence            9999999999999999999999999999999999865432223333333332 2 3478999999999999999988889


Q ss_pred             ccccEEeeCCCccc
Q 044670          234 VTGLNLVVDGGFSV  247 (302)
Q Consensus       234 ~~G~~~~~~gG~~~  247 (302)
                      ++|+.+.+|||+.+
T Consensus       243 itG~~i~vdgg~~~  256 (258)
T PRK07533        243 LTGNTLYIDGGYHI  256 (258)
T ss_pred             ccCcEEeeCCcccc
Confidence            99999999999754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=305.36  Aligned_cols=239  Identities=35%  Similarity=0.508  Sum_probs=206.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57999999999999999999999999999999999988777666554   356788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCC-C-CChhHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAG-I-GSPAYTVS  154 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~-~-~~~~Y~~s  154 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++++.+.|.+++ .++||++||..+.... + ++..|++|
T Consensus        87 id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~as  164 (253)
T PRK05867         87 IDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCAS  164 (253)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHH
Confidence            9999999998654  4677788999999999999999999999999997654 5789999998775432 3 45789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++++++|++++||+||+|+||+|.|++....   ++..+.+... . +.+++.+|+|+|++++||+++...++
T Consensus       165 Kaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~---~~~~~~~~~~-~-~~~r~~~p~~va~~~~~L~s~~~~~~  239 (253)
T PRK05867        165 KAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY---TEYQPLWEPK-I-PLGRLGRPEELAGLYLYLASEASSYM  239 (253)
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc---hHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999986542   2222222222 2 34889999999999999999999999


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|+.+.+|||+.
T Consensus       240 tG~~i~vdgG~~  251 (253)
T PRK05867        240 TGSDIVIDGGYT  251 (253)
T ss_pred             CCCeEEECCCcc
Confidence            999999999975

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.5e-43  Score=307.47  Aligned_cols=244  Identities=25%  Similarity=0.288  Sum_probs=203.2

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc--HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN--LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |+||+++||||+  +|||++++++|+++|++|+++.|+.+  +.++..+++   .....++++|++|+++++++++++.+
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            479999999986  89999999999999999998876543  222222222   23467889999999999999999999


Q ss_pred             HcCCccEEEEcccCCCC--CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           74 KYGKLDIMYNNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      ++|++|+||||||+...  ...++.+.+.++|+++|++|+.++++++++++|.|.+  .|+||++||..+..+.+++..|
T Consensus        84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y  161 (258)
T PRK07370         84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVM  161 (258)
T ss_pred             HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchh
Confidence            99999999999997542  1246778889999999999999999999999999964  4899999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||+|+++|++.++.|++++||+||+|+||++.|++.......++..+.. .... +.+++.+|+|+++++.||+++..
T Consensus       162 ~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~-~~~~-p~~r~~~~~dva~~~~fl~s~~~  239 (258)
T PRK07370        162 GVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHV-EEKA-PLRRTVTQTEVGNTAAFLLSDLA  239 (258)
T ss_pred             hHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhh-hhcC-CcCcCCCHHHHHHHHHHHhChhh
Confidence            999999999999999999999999999999999999764321112322222 2222 34789999999999999999989


Q ss_pred             CCccccEEeeCCCcccC
Q 044670          232 SDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~  248 (302)
                      .+++|+++.+|||+.+.
T Consensus       240 ~~~tG~~i~vdgg~~~~  256 (258)
T PRK07370        240 SGITGQTIYVDAGYCIM  256 (258)
T ss_pred             ccccCcEEEECCccccc
Confidence            99999999999997643

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-43  Score=303.54  Aligned_cols=245  Identities=40%  Similarity=0.566  Sum_probs=211.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||++|||++++++|+++|++|++++|++++.+++.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999988777665544   456888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||.... ..++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||..+. .+.+++..|++||+
T Consensus        84 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  162 (254)
T PRK07478         84 LDIAFNNAGTLGE-MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKA  162 (254)
T ss_pred             CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHH
Confidence            9999999997532 246677889999999999999999999999999988778999999998876 56788899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|+.++||+||+|+||++.|++.......+. ...+.....+ .+++.+|+|+|++++||+++...+++|
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~va~~~~~l~s~~~~~~~G  240 (254)
T PRK07478        163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPE-ALAFVAGLHA-LKRMAQPEEIAQAALFLASDAASFVTG  240 (254)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHH-HHHHHHhcCC-CCCCcCHHHHHHHHHHHcCchhcCCCC
Confidence            99999999999999999999999999999998765432222 2233333223 377899999999999999988889999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +.+.+|||+.+.
T Consensus       241 ~~~~~dgg~~~~  252 (254)
T PRK07478        241 TALLVDGGVSIT  252 (254)
T ss_pred             CeEEeCCchhcc
Confidence            999999997643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.8e-43  Score=306.36  Aligned_cols=243  Identities=23%  Similarity=0.260  Sum_probs=201.1

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCccH---HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||  ++|||++++++|+++|++|++++|+...   .+++....+ ....+++|++|+++++++++++.+++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELD-SELVFRCDVASDDEINQVFADLGKHW   82 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccC-CceEEECCCCCHHHHHHHHHHHHHHh
Confidence            57999999997  6799999999999999999998876432   222222222 34578999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCC--CC-CCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGF--AS-VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|+||||||+.....  .+ +.+.+.++|++++++|+.+++++++++.|.|.++ .++||++||.++..+.+++..|+
T Consensus        83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~  161 (261)
T PRK08690         83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMG  161 (261)
T ss_pred             CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccch
Confidence            99999999999864310  11 3456788999999999999999999999998654 58999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|++.+++.++.|++++||+||+|+||+|.|++.......++..+.+... . +.+++.+|+|+|+++.|++++...
T Consensus       162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~peevA~~v~~l~s~~~~  239 (261)
T PRK08690        162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAH-N-PLRRNVTIEEVGNTAAFLLSDLSS  239 (261)
T ss_pred             hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhc-C-CCCCCCCHHHHHHHHHHHhCcccC
Confidence            99999999999999999999999999999999999765432122322222222 2 348899999999999999999899


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.+.+|||+.+
T Consensus       240 ~~tG~~i~vdgG~~~  254 (261)
T PRK08690        240 GITGEITYVDGGYSI  254 (261)
T ss_pred             CcceeEEEEcCCccc
Confidence            999999999999764

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.3e-43  Score=304.47  Aligned_cols=243  Identities=26%  Similarity=0.303  Sum_probs=204.7

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCc---cHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQD---NLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||+++||||+  +|||++++++|+++|++|++++|+.   +..+++.+++ +.++.++++|++|+++++++++++.++
T Consensus         5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   84 (257)
T PRK08594          5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE   84 (257)
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence            479999999997  8999999999999999999997753   3445555554 356788999999999999999999999


Q ss_pred             cCCccEEEEcccCCCC--CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           75 YGKLDIMYNNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +|++|++|||||+...  ...++.+.+.++|++++++|+.+++.+++.++|.|.+  .|+||++||.++..+.+++.+|+
T Consensus        85 ~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~  162 (257)
T PRK08594         85 VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMG  162 (257)
T ss_pred             CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhH
Confidence            9999999999997532  1246677889999999999999999999999999954  58999999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|++.|+++++.|++++||+||+|+||++.|++.......++..... .... +.+++.+|+|+|++++||+++..+
T Consensus       163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~-~~~~-p~~r~~~p~~va~~~~~l~s~~~~  240 (257)
T PRK08594        163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEI-EERA-PLRRTTTQEEVGDTAAFLFSDLSR  240 (257)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHH-hhcC-CccccCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999998653221111222222 2222 337789999999999999999899


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.+.+|||+.+
T Consensus       241 ~~tG~~~~~dgg~~~  255 (257)
T PRK08594        241 GVTGENIHVDSGYHI  255 (257)
T ss_pred             cccceEEEECCchhc
Confidence            999999999999754

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.9e-43  Score=305.35  Aligned_cols=245  Identities=27%  Similarity=0.448  Sum_probs=207.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+ +..++..+.+   +.++.++.+|++++++++++++++.+++++
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999998 6555554444   456889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.+.|++++++|+.+++.+++.++|+|.+++ ++||++||.++..+.++...|++||+|
T Consensus        83 id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (272)
T PRK08589         83 VDVLFNNAGVDNA-AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGA  160 (272)
T ss_pred             cCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHH
Confidence            9999999998642 13566788899999999999999999999999997654 899999999998888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-H-HHHHHHHHh--ccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-P-AILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~-~~~~~~~~~--~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ++.++++++.|+.++||+||+|+||+|.|++....... + .....+...  ...+.+++.+|+|+|++++|++++...+
T Consensus       161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  240 (272)
T PRK08589        161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF  240 (272)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            99999999999999999999999999999986543211 1 111111111  1123477899999999999999988899


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+.+.+|||....
T Consensus       241 ~~G~~i~vdgg~~~~  255 (272)
T PRK08589        241 ITGETIRIDGGVMAY  255 (272)
T ss_pred             cCCCEEEECCCcccC
Confidence            999999999997643

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-43  Score=306.15  Aligned_cols=243  Identities=27%  Similarity=0.318  Sum_probs=203.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCc---cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQD---NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|++   +..+++.++++ ....+++|++|+++++++++++.+++
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   86 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVAGHCDVTDEASIDAVFETLEKKW   86 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC-CceEEecCCCCHHHHHHHHHHHHHhc
Confidence            578999999997  8999999999999999999998864   23333434443 35678999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +++|+||||||+....  ..++.+.+.++|++++++|+.+++.+++.++|+|.+  .|+||++||.++..+.+++..|++
T Consensus        87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~a  164 (272)
T PRK08159         87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGV  164 (272)
T ss_pred             CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhh
Confidence            9999999999986421  246678889999999999999999999999999853  489999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|++.|+++++.|+.++||+||+|+||++.|++..... ........... ..+.+++.+|+|+|++++||+++...+
T Consensus       165 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~-~~~~~~~~~~~-~~p~~r~~~peevA~~~~~L~s~~~~~  242 (272)
T PRK08159        165 AKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG-DFRYILKWNEY-NAPLRRTVTIEEVGDSALYLLSDLSRG  242 (272)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC-cchHHHHHHHh-CCcccccCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999998754321 11111122222 223478899999999999999998899


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+++.+|||+...
T Consensus       243 itG~~i~vdgG~~~~  257 (272)
T PRK08159        243 VTGEVHHVDSGYHVV  257 (272)
T ss_pred             ccceEEEECCCceee
Confidence            999999999997643

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-43  Score=303.80  Aligned_cols=245  Identities=23%  Similarity=0.303  Sum_probs=207.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++| +++..+...+.+    +.++.++++|++|+++++++++++.+++
T Consensus         6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (260)
T PRK08416          6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF   85 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            57999999999999999999999999999998865 444444443332    4578899999999999999999999999


Q ss_pred             CCccEEEEcccCCCC----CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           76 GKLDIMYNNAGIVDR----GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      +++|+||||||....    .+.++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.+++..|
T Consensus        86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  165 (260)
T PRK08416         86 DRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGH  165 (260)
T ss_pred             CCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccc
Confidence            999999999987531    1246667788999999999999999999999999987777899999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||++++.+++.++.|+.++||+||+|+||+++|++........+..+.+.. .. +.+++.+|+|+|++++||+++..
T Consensus       166 ~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~-~~-~~~r~~~p~~va~~~~~l~~~~~  243 (260)
T PRK08416        166 GTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEE-LS-PLNRMGQPEDLAGACLFLCSEKA  243 (260)
T ss_pred             hhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHh-cC-CCCCCCCHHHHHHHHHHHcChhh
Confidence            99999999999999999999999999999999999986543222333322222 22 34789999999999999999888


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+.+.+|||+.+
T Consensus       244 ~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        244 SWLTGQTIVVDGGTTF  259 (260)
T ss_pred             hcccCcEEEEcCCeec
Confidence            8999999999999754

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=7.6e-43  Score=302.44  Aligned_cols=248  Identities=39%  Similarity=0.554  Sum_probs=211.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||+++||||++|||+++|++|++.|++|++++|+++..++....+      +.++..+.||+++++++++++++..++
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999999877766554      245889999999999999999999999


Q ss_pred             -cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhH-HHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC-hhH
Q 044670           75 -YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG-GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-PAY  151 (302)
Q Consensus        75 -~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y  151 (302)
                       +|++|+||||||..... .+..+.+.++|++++++|+.| .+.+.+.+.+++.+++.+.|+++||.++..+..+. .+|
T Consensus        86 ~~GkidiLvnnag~~~~~-~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y  164 (270)
T KOG0725|consen   86 FFGKIDILVNNAGALGLT-GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAY  164 (270)
T ss_pred             hCCCCCEEEEcCCcCCCC-CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccc
Confidence             79999999999987753 378999999999999999995 67777777788877788999999999988876665 799


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH---HHHHHH-HHhccccCCCCCCHHHHHHHHHHhc
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP---AILEAF-LSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ++||+|+++|+|.+|.||.++|||||+|+||.+.|++ .......   +..... ..+...|.+++..|+|+++.+.||+
T Consensus       165 ~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~fla  243 (270)
T KOG0725|consen  165 GVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-RAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAFLA  243 (270)
T ss_pred             hhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-cccccccchhhHHhhhhccccccccCCccCHHHHHHhHHhhc
Confidence            9999999999999999999999999999999999998 2222222   122221 1122335599999999999999999


Q ss_pred             cCCCCCccccEEeeCCCcccCCC
Q 044670          228 TDEASDVTGLNLVVDGGFSVANP  250 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~~~~  250 (302)
                      ++.+++++|+.+.+|||+.....
T Consensus       244 ~~~asyitG~~i~vdgG~~~~~~  266 (270)
T KOG0725|consen  244 SDDASYITGQTIIVDGGFTVVGP  266 (270)
T ss_pred             CcccccccCCEEEEeCCEEeecc
Confidence            98877999999999999887544

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=303.23  Aligned_cols=244  Identities=28%  Similarity=0.361  Sum_probs=209.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.++.+...+.+     +.++.++.+|++|+++++++++++.+.+
T Consensus         6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T PRK07062          6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF   85 (265)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999999987766654443     2367789999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|
T Consensus        86 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asK  163 (265)
T PRK07062         86 GGVDMLVNNAGQGRV--STFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAAR  163 (265)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHH
Confidence            999999999998653  477788899999999999999999999999999887789999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ++++.++++++.|+.++||+||+|+||+|.|++......        .....+........+.+++.+|+|+|++++||+
T Consensus       164 aal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~L~  243 (265)
T PRK07062        164 AGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALFFLA  243 (265)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999997543110        011111111112234488999999999999999


Q ss_pred             cCCCCCccccEEeeCCCcc
Q 044670          228 TDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++...+++|+.+.+|||+.
T Consensus       244 s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        244 SPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             CchhcccccceEEEcCceE
Confidence            9888899999999999964

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.5e-43  Score=303.11  Aligned_cols=242  Identities=23%  Similarity=0.236  Sum_probs=199.3

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecC---ccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|+++||||  ++|||++++++|+++|++|++++|.   .+..+++.+..+. ..++.+|++|+++++++++++.+++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Dv~d~~~v~~~~~~~~~~~   82 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS-DLVFPCDVASDEQIDALFASLGQHW   82 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCC-cceeeccCCCHHHHHHHHHHHHHHh
Confidence            57899999996  6899999999999999999998654   3333444443332 3468999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCC--CC-CCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGF--AS-VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~--~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|++|||||......  .+ +.+.+.++|++.|++|+.+++.++++++|+|.  +.|+||++||.++..+.+++.+|+
T Consensus        83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~~~~~~~~~~Y~  160 (260)
T PRK06997         83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGAERVVPNYNTMG  160 (260)
T ss_pred             CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEeccccccCCCCcchHH
Confidence            99999999999864210  12 34578899999999999999999999999994  358999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|++.++++++.|++++||+||+|+||+|.|++.......++..+.. .... +.+++.+|+|+++++.||+++++.
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~-~~~~-p~~r~~~pedva~~~~~l~s~~~~  238 (260)
T PRK06997        161 LAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFV-ESNA-PLRRNVTIEEVGNVAAFLLSDLAS  238 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHH-HhcC-cccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998754321112222222 2222 347899999999999999999889


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+++.+|||...
T Consensus       239 ~itG~~i~vdgg~~~  253 (260)
T PRK06997        239 GVTGEITHVDSGFNA  253 (260)
T ss_pred             CcceeEEEEcCChhh
Confidence            999999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-42  Score=299.69  Aligned_cols=242  Identities=32%  Similarity=0.450  Sum_probs=207.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+ ..++..+.+   +.++.++.+|++|+++++++++++.+.++
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999998764 334443333   45678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC--ChhHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG--SPAYTVS  154 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~--~~~Y~~s  154 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++++++.|.+++.++||++||.++..+.++  ...|++|
T Consensus        86 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  163 (254)
T PRK06114         86 ALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNAS  163 (254)
T ss_pred             CCCEEEECCCCCCC--CChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHH
Confidence            99999999998654  4677888999999999999999999999999998777889999999988766553  6899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+|++.+++.++.|+.++||+||+|+||+++|++...... .+..+.+. ...+ .+++.+|+|++++++||+++.++++
T Consensus       164 Kaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~-~~~~~~~~-~~~p-~~r~~~~~dva~~~~~l~s~~~~~~  240 (254)
T PRK06114        164 KAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEM-VHQTKLFE-EQTP-MQRMAKVDEMVGPAVFLLSDAASFC  240 (254)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccc-hHHHHHHH-hcCC-CCCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999998754221 12222222 2223 4889999999999999999989999


Q ss_pred             cccEEeeCCCccc
Q 044670          235 TGLNLVVDGGFSV  247 (302)
Q Consensus       235 ~G~~~~~~gG~~~  247 (302)
                      +|+++.+|||+..
T Consensus       241 tG~~i~~dgg~~~  253 (254)
T PRK06114        241 TGVDLLVDGGFVC  253 (254)
T ss_pred             CCceEEECcCEec
Confidence            9999999999753

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-42  Score=301.44  Aligned_cols=242  Identities=20%  Similarity=0.227  Sum_probs=198.8

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++  |||++++++|+++|++|++++|+. +.++..+++   .....++.+|++|+++++++++++.+++
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            5799999999986  999999999999999999998873 222222222   1345678999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCC---CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGF---ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      |++|++|||||+.....   .++.+.+.++|++++++|+.+++.+++.+.|.+.  ..++||++||.++..+.+++.+|+
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~~~~~~~~~~Y~  160 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMG  160 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCCCCCCCCcchhH
Confidence            99999999999754210   1145678899999999999999999999998764  348999999998888888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|+++|++.++.|++++||+||+|+||++.|++........+..+.. ... .+.+++.+|+|++++++||+++...
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~-~~~-~p~~r~~~pedva~~~~~L~s~~~~  238 (262)
T PRK07984        161 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHC-EAV-TPIRRTVTIEDVGNSAAFLCSDLSA  238 (262)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHH-HHc-CCCcCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999999999998653221111222222 222 2347899999999999999999889


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.+.+|||+..
T Consensus       239 ~itG~~i~vdgg~~~  253 (262)
T PRK07984        239 GISGEVVHVDGGFSI  253 (262)
T ss_pred             cccCcEEEECCCccc
Confidence            999999999999664

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.3e-42  Score=305.93  Aligned_cols=244  Identities=22%  Similarity=0.247  Sum_probs=200.9

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----------------CCeEEEEecC--CC
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----------------EDVCYIHCDV--TS   60 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dl--~~   60 (302)
                      |+||++|||||  |+|||+++|++|+++|++|++ +|+.++++.+...+.                .....+++|+  ++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   85 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT   85 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence            58999999999  899999999999999999998 777666655443221                1136788898  43


Q ss_pred             ------------------HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH
Q 044670           61 ------------------EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA  122 (302)
Q Consensus        61 ------------------~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  122 (302)
                                        +++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++++++.++
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~  165 (303)
T PLN02730         86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG  165 (303)
T ss_pred             cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence                              44899999999999999999999998643222578889999999999999999999999999


Q ss_pred             HhhccCCCCEEEEEcCcccccCCCCC-hhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHH
Q 044670          123 RVMIPQHKGCILFTASACTEIAGIGS-PAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILE  200 (302)
Q Consensus       123 ~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  200 (302)
                      |.|.+  .|+||++||.++..+.+++ ..|++||+|++.|++.|+.|+++ +||+||+|+||++.|++.......++...
T Consensus       166 p~m~~--~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  243 (303)
T PLN02730        166 PIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMIE  243 (303)
T ss_pred             HHHhc--CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHHH
Confidence            99965  3899999999888887765 58999999999999999999986 79999999999999998754211222222


Q ss_pred             HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       201 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                      . ..... +.+++.+|+|++++++||+++...+++|+.+.+|||+...+
T Consensus       244 ~-~~~~~-pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~~g  290 (303)
T PLN02730        244 Y-SYANA-PLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNAMG  290 (303)
T ss_pred             H-HHhcC-CCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccccc
Confidence            2 22222 33678999999999999999989999999999999987654

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-42  Score=300.19  Aligned_cols=243  Identities=26%  Similarity=0.257  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCc--cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQD--NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||  ++|||++++++|+++|++|++++|+.  +..+++.+.++.++.++.+|++|+++++++++++.++++
T Consensus         5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g   84 (256)
T PRK07889          5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD   84 (256)
T ss_pred             ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999  89999999999999999999998764  334555555555678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           77 KLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++|++|||||+....  ..++.+.+.++|++++++|+.+++++++.++|+|.+  .++||+++|.+ ..+.+.+..|++|
T Consensus        85 ~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-~~~~~~~~~Y~as  161 (256)
T PRK07889         85 GLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-TVAWPAYDWMGVA  161 (256)
T ss_pred             CCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-cccCCccchhHHH
Confidence            999999999986421  124667788999999999999999999999999963  47999998754 4556778889999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCC-CCCCHHHHHHHHHHhccCCCCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRG-QVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      |+|+++|+++++.|++++||+||+|+||++.|++.......++..+ .+....++ + ++.+|+|+|++++||+++...+
T Consensus       162 Kaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~~~~~p~-~~~~~~p~evA~~v~~l~s~~~~~  239 (256)
T PRK07889        162 KAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEE-GWDERAPL-GWDVKDPTPVARAVVALLSDWFPA  239 (256)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHH-HHHhcCcc-ccccCCHHHHHHHHHHHhCccccc
Confidence            9999999999999999999999999999999998654321122222 22222233 4 6899999999999999998889


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+++.+|||....
T Consensus       240 ~tG~~i~vdgg~~~~  254 (256)
T PRK07889        240 TTGEIVHVDGGAHAM  254 (256)
T ss_pred             ccceEEEEcCceecc
Confidence            999999999997643

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-42  Score=298.15  Aligned_cols=242  Identities=28%  Similarity=0.395  Sum_probs=211.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...+..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999999999999987776665554   346778899999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.++|++++++|+.+++++++++.+.+.+++.++||++||..+..+.++...|++||++
T Consensus        87 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  164 (254)
T PRK08085         87 IDVLINNAGIQRR--HPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGA  164 (254)
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHH
Confidence            9999999997643  46778889999999999999999999999999977777999999999888888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.++++++.|++++||++|+|+||++.|++.......+... ....... +.+++.+|+|+|+++.|++++.+.+++|+
T Consensus       165 ~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~-~~~~~~~-p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        165 VKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFT-AWLCKRT-PAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHH-HHHHhcC-CCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            999999999999999999999999999999876533223322 2222322 34889999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||+.
T Consensus       243 ~i~~dgg~~  251 (254)
T PRK08085        243 LLFVDGGML  251 (254)
T ss_pred             EEEECCCee
Confidence            999999965

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-42  Score=296.59  Aligned_cols=242  Identities=31%  Similarity=0.473  Sum_probs=208.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH---HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+ +..+.+.   ...+.++.++.+|++++++++++++++.+.+++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999988 3333333   233567889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++++++.|.+++.++||++||..+..+.+++..|++||++
T Consensus        92 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  169 (258)
T PRK06935         92 IDILVNNAGTIRR--APLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHG  169 (258)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHH
Confidence            9999999998653  46777889999999999999999999999999988778999999999998888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.+++|+.++||+||+|+||++.|++.......+..........  +.+++.+|+|++.++.||+++...+++|+
T Consensus       170 ~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~  247 (258)
T PRK06935        170 VAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRI--PAGRWGEPDDLMGAAVFLASRASDYVNGH  247 (258)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcC--CCCCCCCHHHHHHHHHHHcChhhcCCCCC
Confidence            9999999999999999999999999999997654322222222223222  23789999999999999999988999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      ++.+|||..+
T Consensus       248 ~i~~dgg~~~  257 (258)
T PRK06935        248 ILAVDGGWLV  257 (258)
T ss_pred             EEEECCCeec
Confidence            9999999653

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-42  Score=302.04  Aligned_cols=243  Identities=30%  Similarity=0.481  Sum_probs=205.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc---------cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD---------NLGQALACKL---GEDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.         +..+++.+++   +.++.++.+|++|++++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5799999999999999999999999999999998765         4455554444   456788999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC------CCEEEEEcCcccc
Q 044670           69 DTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH------KGCILFTASACTE  142 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~~sS~~~~  142 (302)
                      +++.+.++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.++.      .++||++||.++.
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~  161 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRD--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL  161 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC
Confidence            9999999999999999998654  4677889999999999999999999999999986532      3799999999999


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      .+.+++..|++||+|++.|++.++.|++++||+||+|+|| +.|++...      .........+....+..+|+|+|++
T Consensus       162 ~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~------~~~~~~~~~~~~~~~~~~pedva~~  234 (286)
T PRK07791        162 QGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTET------VFAEMMAKPEEGEFDAMAPENVSPL  234 (286)
T ss_pred             cCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchh------hHHHHHhcCcccccCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999 78876532      1112222111100136799999999


Q ss_pred             HHHhccCCCCCccccEEeeCCCcccCCCCc
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      ++||+++...+++|+.+.+|||.....+.+
T Consensus       235 ~~~L~s~~~~~itG~~i~vdgG~~~~~~~~  264 (286)
T PRK07791        235 VVWLGSAESRDVTGKVFEVEGGKISVAEGW  264 (286)
T ss_pred             HHHHhCchhcCCCCcEEEEcCCceEEechh
Confidence            999999888899999999999988755444

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-42  Score=296.68  Aligned_cols=242  Identities=19%  Similarity=0.206  Sum_probs=205.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +++|||||++|||++++++|+++|++|++++|+++..++..+++.  .++.++.+|++|+++++++++++.++++++|+|
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            379999999999999999999999999999999887766655542  367889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      |||||.......++.+.+.++|.+.+++|+.+++.+++.+++.|.+ ++.|+||++||.++..+.++...|++||++++.
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            9999975432245677788999999999999999999999998863 457899999999998888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------C-CHHHH-HHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------I-NPAIL-EAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~-~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.++.|+.++||+||+|+||++.|++.....        . .++.. +.+... . +.+++.+|+|+|++++||++++
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLER-T-PLKRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhcc-C-CccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999864210        0 11111 122222 2 3488999999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      +++++|+++.+|||...
T Consensus       239 ~~~itG~~i~vdgg~~~  255 (259)
T PRK08340        239 AEYMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccccCceEeecCCcCC
Confidence            99999999999999654

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-42  Score=299.20  Aligned_cols=244  Identities=34%  Similarity=0.521  Sum_probs=207.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+.+.+..+.++.++++|++|+++++++++++.+.++++|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57899999999999999999999999999999999988887777766667889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHH----HHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSD----LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ||||||+.... .++.+.+.++    |++++++|+.+++.+++.++|.|.++ .++||++||.++..+.++...|++||+
T Consensus        84 li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (263)
T PRK06200         84 FVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKH  161 (263)
T ss_pred             EEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHH
Confidence            99999975421 3454555554    88999999999999999999998654 589999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +++.+++.++.|+++ +|+||+|+||++.|++......         .++.. ....... +.+++.+|+|+|++++||+
T Consensus       162 a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-p~~r~~~~~eva~~~~fl~  238 (263)
T PRK06200        162 AVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA-DMIAAIT-PLQFAPQPEDHTGPYVLLA  238 (263)
T ss_pred             HHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchh-HHhhcCC-CCCCCCCHHHHhhhhhhee
Confidence            999999999999998 4999999999999997542210         11112 2222222 3488999999999999999


Q ss_pred             cCC-CCCccccEEeeCCCcccCC
Q 044670          228 TDE-ASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       228 s~~-~~~~~G~~~~~~gG~~~~~  249 (302)
                      ++. +.+++|+.+.+|||+.+..
T Consensus       239 s~~~~~~itG~~i~vdgG~~~~~  261 (263)
T PRK06200        239 SRRNSRALTGVVINADGGLGIRG  261 (263)
T ss_pred             cccccCcccceEEEEcCceeecc
Confidence            988 8999999999999977554

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.1e-41  Score=295.12  Aligned_cols=242  Identities=27%  Similarity=0.446  Sum_probs=205.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||+++||||++|||++++++|+++|++|++++++... ..+.....+.++.++.+|++|+++++++++++.++++++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999988775432 1122223355688899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .++.+.+.++|++++++|+.+++++++++.+.|.+++ .|+||++||..+..+.+.+..|+.||+|+
T Consensus        88 ~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  165 (253)
T PRK08993         88 ILVNNAGLIRR--EDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGV  165 (253)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHH
Confidence            99999998653  4677888999999999999999999999999987654 58999999999888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.|+.++||+||+|+||++.|++...........+.+... .+ .+++..|+|+|++++||+++...+++|+.
T Consensus       166 ~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~-~p-~~r~~~p~eva~~~~~l~s~~~~~~~G~~  243 (253)
T PRK08993        166 MGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR-IP-AGRWGLPSDLMGPVVFLASSASDYINGYT  243 (253)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence            99999999999999999999999999999875432222222233332 23 47899999999999999999999999999


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.+|||+.
T Consensus       244 ~~~dgg~~  251 (253)
T PRK08993        244 IAVDGGWL  251 (253)
T ss_pred             EEECCCEe
Confidence            99999964

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=300.95  Aligned_cols=242  Identities=25%  Similarity=0.292  Sum_probs=204.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc--HHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN--LGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+  ..+++.+   ..+.++.++.+|++|++++.++++++.+.+
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999876542  3333332   234567889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|++|||||.... ..++.+.+.++|++++++|+.+++++++++.|+|.+  .++||++||..+..+.+++.+|++||
T Consensus       127 g~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asK  203 (294)
T PRK07985        127 GGLDIMALVAGKQVA-IPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_pred             CCCCEEEECCCCCcC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHH
Confidence            999999999997432 246778889999999999999999999999999854  48999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||+||+|+||+|+|++.......++....+... . +.+++.+|+|+|++++||+++++.+++
T Consensus       204 aal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~-~~~r~~~pedva~~~~fL~s~~~~~it  281 (294)
T PRK07985        204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ-T-PMKRAGQPAELAPVYVYLASQESSYVT  281 (294)
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhcc-C-CCCCCCCHHHHHHHHHhhhChhcCCcc
Confidence            99999999999999999999999999999999864322223333333222 2 337899999999999999999899999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+.+.+|||+.+
T Consensus       282 G~~i~vdgG~~~  293 (294)
T PRK07985        282 AEVHGVCGGEHL  293 (294)
T ss_pred             ccEEeeCCCeeC
Confidence            999999999753

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=8.4e-42  Score=296.59  Aligned_cols=239  Identities=31%  Similarity=0.474  Sum_probs=205.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+....        .++.++.+|++|+++++++++++.++++++|+
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~   75 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY--------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDI   75 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999999976532        25788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||..+..+.+++..|++||++++.
T Consensus        76 li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~  153 (258)
T PRK06398         76 LVNNAGIESY--GAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLG  153 (258)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHH
Confidence            9999998643  57788899999999999999999999999999987778999999999999888999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHHHH---HHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILEAF---LSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +++.++.|+.+. |+||+|+||++.|++.....     ..++.....   .... .+.+++.+|+|+|++++||+++...
T Consensus       154 ~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~eva~~~~~l~s~~~~  231 (258)
T PRK06398        154 LTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEM-HPMKRVGKPEEVAYVVAFLASDLAS  231 (258)
T ss_pred             HHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhc-CCcCCCcCHHHHHHHHHHHcCcccC
Confidence            999999999875 99999999999999864321     111111111   1122 2347889999999999999998888


Q ss_pred             CccccEEeeCCCcccCCCC
Q 044670          233 DVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~~~~  251 (302)
                      +++|+.+.+|||+....|.
T Consensus       232 ~~~G~~i~~dgg~~~~~~~  250 (258)
T PRK06398        232 FITGECVTVDGGLRALIPL  250 (258)
T ss_pred             CCCCcEEEECCccccCCCC
Confidence            9999999999998765444

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=1.5e-41  Score=293.09  Aligned_cols=242  Identities=33%  Similarity=0.478  Sum_probs=206.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||++|||.+++++|+++|++|++++|++. ...+.....+.++.++.+|+++++++.++++++.+.++++|
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999999999999999999999999999999998753 22222333456788999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .++.+.+.++|++++++|+.+++++++++++.|.+++ .++||++||..+..+.++...|+.||+++
T Consensus        83 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~  160 (248)
T TIGR01832        83 ILVNNAGIIRR--ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGV  160 (248)
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHH
Confidence            99999998654  4666788899999999999999999999999987655 68999999998888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.|+.++||+||+|+||++.|++..................  +.+++.+|+|+|+++++++++...+++|++
T Consensus       161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (248)
T TIGR01832       161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERI--PAGRWGTPDDIGGPAVFLASSASDYVNGYT  238 (248)
T ss_pred             HHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCccccCcCCcE
Confidence            999999999999999999999999999998654322222222222322  237899999999999999998888999999


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.+|||+.
T Consensus       239 i~~dgg~~  246 (248)
T TIGR01832       239 LAVDGGWL  246 (248)
T ss_pred             EEeCCCEe
Confidence            99999964

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-41  Score=297.94  Aligned_cols=246  Identities=28%  Similarity=0.403  Sum_probs=210.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|++|++++.++++++.+++++
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999887766655544   356888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCC-------------CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC
Q 044670           78 LDIMYNNAGIVDRG-------------FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA  144 (302)
Q Consensus        78 id~lv~~Ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~  144 (302)
                      +|++|||||.....             ..++.+.+.++|++.+++|+.+++.+++.+++.|.+++.++||++||.++..+
T Consensus        88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~  167 (278)
T PRK08277         88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTP  167 (278)
T ss_pred             CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCC
Confidence            99999999965321             12456778899999999999999999999999998777899999999999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-----HHHHHHHHHhccccCCCCCCHHHH
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-----PAILEAFLSEMGNLRGQVLNAEGI  219 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~dv  219 (302)
                      .++...|++||++++.++++++.|+.++||+||+|+||++.|++.......     .+..+.....  .+.+++.+|+|+
T Consensus       168 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~~~dv  245 (278)
T PRK08277        168 LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH--TPMGRFGKPEEL  245 (278)
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc--CCccCCCCHHHH
Confidence            999999999999999999999999999999999999999999975432111     1122222222  234889999999


Q ss_pred             HHHHHHhccC-CCCCccccEEeeCCCcccC
Q 044670          220 ANAALYLATD-EASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       220 a~~~~~l~s~-~~~~~~G~~~~~~gG~~~~  248 (302)
                      |++++||+++ .+.+++|+.+.+|||+...
T Consensus       246 a~~~~~l~s~~~~~~~tG~~i~vdgG~~~~  275 (278)
T PRK08277        246 LGTLLWLADEKASSFVTGVVLPVDGGFSAY  275 (278)
T ss_pred             HHHHHHHcCccccCCcCCCEEEECCCeecc
Confidence            9999999998 8899999999999997654

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-41  Score=293.16  Aligned_cols=240  Identities=28%  Similarity=0.364  Sum_probs=201.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH--
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK--   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~--   74 (302)
                      |++|+++||||++|||++++++|+++|++|+++. |+.+..++...++   +..+..+.+|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            5789999999999999999999999999999875 4545554443333   456778899999999999999988753  


Q ss_pred             --cC--CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChh
Q 044670           75 --YG--KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA  150 (302)
Q Consensus        75 --~~--~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~  150 (302)
                        ++  ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~  157 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIA  157 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchh
Confidence              34  89999999997543  46778889999999999999999999999999964  489999999999998899999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++||++++.+++.++.|+.++||+||+|+||+|.|++....... ........... +.+++.+|+|+|+++.||+++.
T Consensus       158 Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        158 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSD-PMMKQYATTIS-AFNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccC-HHHHHHHHhcC-cccCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999986543222 22222322222 2478999999999999999988


Q ss_pred             CCCccccEEeeCCCcc
Q 044670          231 ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~  246 (302)
                      ..+++|+.+.+|||..
T Consensus       236 ~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        236 SRWVTGQLIDVSGGSC  251 (252)
T ss_pred             ccCcCCcEEEecCCcc
Confidence            8899999999999964

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.3e-41  Score=298.73  Aligned_cols=252  Identities=47%  Similarity=0.797  Sum_probs=211.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+.++  .++.++.+|++|+++++++++++.+.++++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999998776666655553  468899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||.......++.+.+.++|++++++|+.+++++++++.+.|.+++.++||+++|.++..+.++...|++||+++
T Consensus        96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  175 (280)
T PLN02253         96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAV  175 (280)
T ss_pred             CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHH
Confidence            99999999864322356778899999999999999999999999999776778999999999888888888999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH----HHHHH---HHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP----AILEA---FLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +.+++.++.|++++||+|++++||++.|++........    .....   ......++.++..+|+|+|++++|++++..
T Consensus       176 ~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s~~~  255 (280)
T PLN02253        176 LGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLASDEA  255 (280)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcCccc
Confidence            99999999999999999999999999998754321111    11111   111112222456899999999999999988


Q ss_pred             CCccccEEeeCCCcccCCCCc
Q 044670          232 SDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      .+++|+.+.+|||.......+
T Consensus       256 ~~i~G~~i~vdgG~~~~~~~~  276 (280)
T PLN02253        256 RYISGLNLMIDGGFTCTNHSL  276 (280)
T ss_pred             ccccCcEEEECCchhhccchh
Confidence            999999999999987655443

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=294.02  Aligned_cols=243  Identities=30%  Similarity=0.424  Sum_probs=212.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+++..++..+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999987766655544   345888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++++.+.|.+++.++||++||..+..+.++...|+++|++
T Consensus        88 ~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a  165 (255)
T PRK07523         88 IDILVNNAGMQFR--TPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGA  165 (255)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHH
Confidence            9999999998654  57778899999999999999999999999999987778999999999888888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||+||+|+||++.|++.......+.. ........+ .+++.+|+|+|+++++|++++..+++|+
T Consensus       166 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~~~~G~  243 (255)
T PRK07523        166 VGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEF-SAWLEKRTP-AGRWGKVEELVGACVFLASDASSFVNGH  243 (255)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHH-HHHHHhcCC-CCCCcCHHHHHHHHHHHcCchhcCccCc
Confidence            99999999999999999999999999999986543222322 223333333 3789999999999999999888899999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .+.+|||+..
T Consensus       244 ~i~~~gg~~~  253 (255)
T PRK07523        244 VLYVDGGITA  253 (255)
T ss_pred             EEEECCCeec
Confidence            9999999754

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-41  Score=292.64  Aligned_cols=243  Identities=37%  Similarity=0.538  Sum_probs=210.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||.+++++|+++|++|++++|+.+..+...+.+   +.++.++.+|++|++++.++++++.+.+++
T Consensus         5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999987765554433   457889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||..... .++.+.+.+++++++++|+.+++.++++++|+|.+++.+++|++||..+..+.+++..|+.||++
T Consensus        85 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  163 (253)
T PRK06172         85 LDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHA  163 (253)
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHH
Confidence            99999999975431 34677889999999999999999999999999987777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.+++.++.|+.++||+|++|+||+|.|++...... .+...+.+.. ..+ .+++.+|+|+++.++||+++...+++|
T Consensus       164 ~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~p~~ia~~~~~l~~~~~~~~~G  241 (253)
T PRK06172        164 VIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA-MHP-VGRIGKVEEVASAVLYLCSDGASFTTG  241 (253)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc-cCC-CCCccCHHHHHHHHHHHhCccccCcCC
Confidence            9999999999999999999999999999998765432 2222222222 223 377899999999999999998899999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+|||+.
T Consensus       242 ~~i~~dgg~~  251 (253)
T PRK06172        242 HALMVDGGAT  251 (253)
T ss_pred             cEEEECCCcc
Confidence            9999999974

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=3.8e-41  Score=298.69  Aligned_cols=242  Identities=28%  Similarity=0.344  Sum_probs=205.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|+++.++.+.  .+++.+.   .+.++.++.+|++|+++++++++++.+.+
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            468999999999999999999999999999998875432  2233222   24567889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||.... ..++.+.+.++|++++++|+.+++++++++++.|.+  .++||++||..+..+.+++..|++||
T Consensus       133 g~iD~lV~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        133 GGLDILVNIAGKQTA-VKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             CCCCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHH
Confidence            999999999997532 146778899999999999999999999999999854  47999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|++.++.++.++||+||+|+||+++|++.......++....+...  .+.+++.+|+|+|.+++||+++...+++
T Consensus       210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~--~p~~r~~~p~dva~~~~~l~s~~~~~~~  287 (300)
T PRK06128        210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSE--TPMKRPGQPVEMAPLYVLLASQESSYVT  287 (300)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcC--CCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            99999999999999999999999999999999865432233333333222  2347899999999999999998888999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+.+.+|||..+
T Consensus       288 G~~~~v~gg~~~  299 (300)
T PRK06128        288 GEVFGVTGGLLL  299 (300)
T ss_pred             CcEEeeCCCEeC
Confidence            999999999754

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-41  Score=290.33  Aligned_cols=243  Identities=32%  Similarity=0.435  Sum_probs=211.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|+++.++++++++++.+.+++
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887766665544   345788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||.... ..++.+.+.+++++.+++|+.++++++++++++|.+++.++|+++||..+..+.+++..|++||++
T Consensus        86 id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  164 (252)
T PRK07035         86 LDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAA  164 (252)
T ss_pred             CCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHH
Confidence            9999999997532 246677889999999999999999999999999987778999999999988888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++++++|+.++||+|++|+||++.|++.......+...+..... . +.+++.+|+|+|+++++++++...+++|+
T Consensus       165 l~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~va~~~~~l~~~~~~~~~g~  242 (252)
T PRK07035        165 VISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAH-I-PLRRHAEPSEMAGAVLYLASDASSYTTGE  242 (252)
T ss_pred             HHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHcc-C-CCCCcCCHHHHHHHHHHHhCccccCccCC
Confidence            999999999999999999999999999999876543333333333222 2 34778999999999999999988999999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      ++.+|||+.
T Consensus       243 ~~~~dgg~~  251 (252)
T PRK07035        243 CLNVDGGYL  251 (252)
T ss_pred             EEEeCCCcC
Confidence            999999964

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-42  Score=302.75  Aligned_cols=266  Identities=19%  Similarity=0.143  Sum_probs=207.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc----------cHHHHHHHHh---CCCeEEEEecCCCHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD----------NLGQALACKL---GEDVCYIHCDVTSEDEITNL   67 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----------~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~   67 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.          +..+++.+.+   +.++.++.+|++|+++++++
T Consensus         6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   85 (305)
T PRK08303          6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL   85 (305)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            5799999999999999999999999999999999974          2333333332   45678899999999999999


Q ss_pred             HHHHHHHcCCccEEEEcc-cCCC--CCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-
Q 044670           68 VDTAVAKYGKLDIMYNNA-GIVD--RGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-  143 (302)
Q Consensus        68 ~~~~~~~~~~id~lv~~A-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-  143 (302)
                      ++++.+++|++|+||||| |...  ....++.+.+.++|++++++|+.+++.++++++|.|.+++.|+||++||..+.. 
T Consensus        86 ~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~  165 (305)
T PRK08303         86 VERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccccc
Confidence            999999999999999999 7531  111466778889999999999999999999999999877679999999976543 


Q ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhccccCCCCCCHHHHH
Q 044670          144 --AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNLRGQVLNAEGIA  220 (302)
Q Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (302)
                        +.++...|++||+|+.+|+++++.|++++||+||+|+||+|.|++..... ..+......... .++.++..+|+|+|
T Consensus       166 ~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~peevA  244 (305)
T PRK08303        166 ATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAK-EPHFAISETPRYVG  244 (305)
T ss_pred             CcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhcc-ccccccCCCHHHHH
Confidence              23356789999999999999999999999999999999999999753211 011111111222 22236677999999


Q ss_pred             HHHHHhccCCC-CCccccEEeeCCCcccCCCCccccCCCccceeeccCCcccc
Q 044670          221 NAALYLATDEA-SDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSF  272 (302)
Q Consensus       221 ~~~~~l~s~~~-~~~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (302)
                      ++++||++++. .+++|+++.  ++........   ..+...++.+|+.+.++
T Consensus       245 ~~v~fL~s~~~~~~itG~~l~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~  292 (305)
T PRK08303        245 RAVAALAADPDVARWNGQSLS--SGQLARVYGF---TDLDGSRPDAWRYLVEV  292 (305)
T ss_pred             HHHHHHHcCcchhhcCCcEEE--hHHHHHhcCc---cCCCCCCCcchhhhhhc
Confidence            99999999874 589999863  2222222222   33557888999998876

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=2.2e-42  Score=297.27  Aligned_cols=231  Identities=36%  Similarity=0.521  Sum_probs=200.1

Q ss_pred             CCC--ChHHHHHHHHHHHcCCEEEEEecCccHH----HHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccEEE
Q 044670           10 GGA--SGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDIMY   82 (302)
Q Consensus        10 Gas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~lv   82 (302)
                      |++  +|||++++++|+++|++|++++|+.++.    +++.++.+.  .++.+|++++++++++++++.+.+ |++|+||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~--~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGA--EVIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTS--EEEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCC--ceEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  9999999999999999999999998874    344444444  369999999999999999999999 9999999


Q ss_pred             EcccCCCC--CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           83 NNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        83 ~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||+|....  ...++.+.+.++|++.+++|+.+++.+++++.|+|.+  .++||++||.++..+.+++..|+++|+|++.
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~~~~~~~~~~~~y~~sKaal~~  156 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSIAAQRPMPGYSAYSASKAALEG  156 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccchhhcccCccchhhHHHHHHHHH
Confidence            99998764  2357778889999999999999999999999998865  4899999999999999999999999999999


Q ss_pred             HHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      ++|.++.||++ +|||||+|+||++.|++.......+++.+.+. +..| .+++.+|+|||++++||+|+.++++|||+|
T Consensus       157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~-~~~p-l~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELK-KRIP-LGRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHH-HHST-TSSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhh-hhhc-cCCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence            99999999999 99999999999999998654322233333333 3333 388899999999999999999999999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||++
T Consensus       235 ~vDGG~s  241 (241)
T PF13561_consen  235 PVDGGFS  241 (241)
T ss_dssp             EESTTGG
T ss_pred             EECCCcC
Confidence            9999974

...

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.3e-41  Score=290.52  Aligned_cols=240  Identities=30%  Similarity=0.465  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+++||||++|||++++++|+++|++|+++.++.+. .+.+..   ..+.++.+|++|+++++++++++.++++++|
T Consensus         5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06463          5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE---KGVFTIKCDVGNRDQVKKSKEVVEKEFGRVD   81 (255)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh---CCCeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            468999999999999999999999999999988765443 333322   2468899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-CCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-AGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-~~~~~~~Y~~sK~a~  158 (302)
                      +||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++.. +.++...|++||+|+
T Consensus        82 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~  159 (255)
T PRK06463         82 VLVNNAGIMYL--MPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGI  159 (255)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHH
Confidence            99999998653  467778899999999999999999999999999877789999999988764 346778899999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH--HHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP--AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.++++++.|+.++||+||+|+||++.|++........  .......... .+.+++.+|+|+|+++++++++...+++|
T Consensus       160 ~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~s~~~~~~~G  238 (255)
T PRK06463        160 IILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK-TVLKTTGKPEDIANIVLFLASDDARYITG  238 (255)
T ss_pred             HHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC-CCcCCCcCHHHHHHHHHHHcChhhcCCCC
Confidence            99999999999999999999999999999875422111  1122222222 23477899999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+|||..
T Consensus       239 ~~~~~dgg~~  248 (255)
T PRK06463        239 QVIVADGGRI  248 (255)
T ss_pred             CEEEECCCee
Confidence            9999999975

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=1.7e-41  Score=295.27  Aligned_cols=244  Identities=34%  Similarity=0.513  Sum_probs=203.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+++.+..+.++.++.+|++|.+++.++++++.++++++|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            47999999999999999999999999999999999988777766555567888999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCC----HHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTP----KSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ||||||..... .++.+.+    .++|++++++|+.++++++++++|.|.++ .+++|+++|..+..+.++...|++||+
T Consensus        83 li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sKa  160 (262)
T TIGR03325        83 LIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKH  160 (262)
T ss_pred             EEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHHH
Confidence            99999975321 2333333    25799999999999999999999999765 488999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHH-----HHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPA-----ILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      |++.|++.++.|++++ |+||+|+||++.|++......  .+.     ..........+ .+++.+|+|+|++++||+++
T Consensus       161 a~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       161 AVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLP-IGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             HHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCC-CCCCCChHHhhhheeeeecC
Confidence            9999999999999986 999999999999998643210  010     11222333223 48899999999999999987


Q ss_pred             C-CCCccccEEeeCCCcccC
Q 044670          230 E-ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       230 ~-~~~~~G~~~~~~gG~~~~  248 (302)
                      . ..+++|+++.+|||+...
T Consensus       239 ~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       239 GDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             CCcccccceEEEecCCeeec
Confidence            4 568999999999997643

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=2.2e-41  Score=287.40  Aligned_cols=219  Identities=25%  Similarity=0.310  Sum_probs=197.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +.+++++|||||+|||.++|++|+++|++|+++.|++++++++.+++.    ..++++++|+++++++..+.+++.+..+
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999999999998888773    5678999999999999999999999988


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      .||+||||||+...  .++.+.+.++.++++++|+.+...++++++|.|.+++.|.||+++|.++..+.|.++.|++||+
T Consensus        84 ~IdvLVNNAG~g~~--g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa  161 (265)
T COG0300          84 PIDVLVNNAGFGTF--GPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKA  161 (265)
T ss_pred             cccEEEECCCcCCc--cchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHH
Confidence            99999999999875  6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++..|+++|+.|+.++||+|.+++||++.|++..........        ..+...+++|+++|+..+..+..
T Consensus       162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~~~~~--------~~~~~~~~~~~~va~~~~~~l~~  226 (265)
T COG0300         162 FVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGSDVYL--------LSPGELVLSPEDVAEAALKALEK  226 (265)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccccccc--------ccchhhccCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998621111000        01114488999999999998854

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=288.88  Aligned_cols=244  Identities=32%  Similarity=0.464  Sum_probs=210.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+.++.++.++.+|++|++++.++++++.+.++++|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999988887777666667889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +|||||....  .++.+.+.+++++++++|+.+++++++++.+.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        84 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  161 (257)
T PRK07067         84 LFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVI  161 (257)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHH
Confidence            9999997653  4777788999999999999999999999999986653 579999999988888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      .+++.++.|+.++||++|+|+||+++|++.....        ..+.......... .+.+++.+++|+|+++++|+++..
T Consensus       162 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~s~~~  240 (257)
T PRK07067        162 SYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEA-VPLGRMGVPDDLTGMALFLASADA  240 (257)
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhc-CCCCCccCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999754321        0111111112121 234889999999999999999988


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+++++|||..+
T Consensus       241 ~~~~g~~~~v~gg~~~  256 (257)
T PRK07067        241 DYIVAQTYNVDGGNWM  256 (257)
T ss_pred             ccccCcEEeecCCEeC
Confidence            8999999999999654

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=2.2e-40  Score=287.21  Aligned_cols=241  Identities=27%  Similarity=0.431  Sum_probs=207.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+.+...+   +.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            789999999999999999999999999999999887766655543   35678899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .++.+.+.+++++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.++...|++||+++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVAPT--TPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            99999998654  4677888999999999999999999999999987654 57999999999988888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHH-HHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAI-LEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.+++.++.|+.++||+||+|+||++.|++.....        ....+ ...+....  +.+++.+++|+|+++.||+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~va~~~~~L~~~  237 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI--TLGRLSEPEDVANCVSFLAGP  237 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC--CCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999865321        01111 12222222  237889999999999999999


Q ss_pred             CCCCccccEEeeCCCccc
Q 044670          230 EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~  247 (302)
                      ...+++|+.+.+|||...
T Consensus       238 ~~~~~~G~~i~vdgg~~~  255 (256)
T PRK08643        238 DSDYITGQTIIVDGGMVF  255 (256)
T ss_pred             cccCccCcEEEeCCCeec
Confidence            999999999999999653

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-40  Score=287.32  Aligned_cols=242  Identities=36%  Similarity=0.539  Sum_probs=207.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+......+..+..+.++.+|++++++++++++++.+.++++|+
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999999876433332222345678999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .+..+.+.+++++++++|+.+++++++.+.+.|.+++.++||++||..+..+.+.+..|++||++++.
T Consensus        93 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  170 (255)
T PRK06841         93 LVNSAGVALL--APAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVG  170 (255)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHH
Confidence            9999998653  46677788999999999999999999999999987778999999999988899999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||++.|++..... .......+... . +.+++.+|+|+++++++++++...+++|+++.
T Consensus       171 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~~va~~~~~l~~~~~~~~~G~~i~  247 (255)
T PRK06841        171 MTKVLALEWGPYGITVNAISPTVVLTELGKKAW-AGEKGERAKKL-I-PAGRFAYPEEIAAAALFLASDAAAMITGENLV  247 (255)
T ss_pred             HHHHHHHHHHhhCeEEEEEEeCcCcCccccccc-chhHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCccccCccCCEEE
Confidence            999999999999999999999999999865432 11222222222 2 34789999999999999999989999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       248 ~dgg~~~  254 (255)
T PRK06841        248 IDGGYTI  254 (255)
T ss_pred             ECCCccC
Confidence            9999753

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.1e-40  Score=316.99  Aligned_cols=243  Identities=33%  Similarity=0.458  Sum_probs=212.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +||++|||||++|||++++++|+++|++|++++|+++..+.+.+.++.+...+.+|++|+++++++++++.++++++|+|
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  347 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL  347 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            68999999999999999999999999999999999888888777777777889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||.... ..++.+.+.++|++++++|+.+++++++.++|+|  .+.++||++||.++..+.+++..|++||++++.|
T Consensus       348 i~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l  424 (520)
T PRK06484        348 VNNAGIAEV-FKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIASLLALPPRNAYCASKAAVTML  424 (520)
T ss_pred             EECCCCcCC-CCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhhcCCCCCCchhHHHHHHHHHH
Confidence            999997632 2467778899999999999999999999999999  3468999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      ++.++.|+.++||+||+|+||+|.|++....... ....+.+.+. . +.+++.+|+|+|++++||+++...+++|+.+.
T Consensus       425 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~  502 (520)
T PRK06484        425 SRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRR-I-PLGRLGDPEEVAEAIAFLASPAASYVNGATLT  502 (520)
T ss_pred             HHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            9999999999999999999999999986543211 2222233222 2 23778999999999999999888899999999


Q ss_pred             eCCCcccCC
Q 044670          241 VDGGFSVAN  249 (302)
Q Consensus       241 ~~gG~~~~~  249 (302)
                      +|||+....
T Consensus       503 vdgg~~~~~  511 (520)
T PRK06484        503 VDGGWTAFG  511 (520)
T ss_pred             ECCCccCCC
Confidence            999975443

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-40  Score=286.17  Aligned_cols=237  Identities=31%  Similarity=0.388  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.     ...+..+.++.+|++++++++++++.+.+.++++|+
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998654     122356788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .+..+.+.++|++++++|+.+++.+++.+.+.|.++ +.++||++||..+..+.+++..|++||++++
T Consensus        79 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  156 (252)
T PRK07856         79 LVNNAGGSPY--ALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLL  156 (252)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHH
Confidence            9999997653  466778889999999999999999999999998764 4589999999999999899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.|+.++ |++|+|+||++.|++.......++....+... . +.+++.+|+|+|+++++|+++...+++|+.+
T Consensus       157 ~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~p~~va~~~~~L~~~~~~~i~G~~i  233 (252)
T PRK07856        157 NLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYGDAEGIAAVAAT-V-PLGRLATPADIAWACLFLASDLASYVSGANL  233 (252)
T ss_pred             HHHHHHHHHhcCC-eEEEEEEeccccChHHhhhccCHHHHHHHhhc-C-CCCCCcCHHHHHHHHHHHcCcccCCccCCEE
Confidence            9999999999987 99999999999999865432233333333222 2 2378899999999999999988889999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||...
T Consensus       234 ~vdgg~~~  241 (252)
T PRK07856        234 EVHGGGER  241 (252)
T ss_pred             EECCCcch
Confidence            99999653

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.8e-40  Score=285.90  Aligned_cols=243  Identities=26%  Similarity=0.362  Sum_probs=213.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.+..++..+.+     +.++.++.+|++++++++++++++.+.+
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999987776665543     3468889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||....  .+..+.+.+++++.+++|+.+++.++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus        87 g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK  164 (257)
T PRK09242         87 DGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTK  164 (257)
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHH
Confidence            999999999997543  467778899999999999999999999999999877778999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|+.++||++|+|+||++.|++.......++..+.....  .+.+++.+++|++.++.+++++...+++
T Consensus       165 ~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~  242 (257)
T PRK09242        165 AALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIER--TPMRRVGEPEEVAAAVAFLCMPAASYIT  242 (257)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCccccccc
Confidence            99999999999999999999999999999999876554344444444332  2337788999999999999998778899


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+.+.+|||...
T Consensus       243 g~~i~~~gg~~~  254 (257)
T PRK09242        243 GQCIAVDGGFLR  254 (257)
T ss_pred             CCEEEECCCeEe
Confidence            999999999653

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-40  Score=286.41  Aligned_cols=240  Identities=34%  Similarity=0.496  Sum_probs=208.6

Q ss_pred             CCCCEEEEeCCCC-hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGAS-GIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G-EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +++|+++||||+| |||+++++.|+++|++|++++|+.+..+...+.+    + .++.++.+|++++++++++++++.+.
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999985 9999999999999999999999887666554433    2 36788999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      ++++|+||||||....  .++.+.+.++|++++++|+.+++.+++.++|.|..+. .++||+++|..+..+.+++..|++
T Consensus        95 ~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  172 (262)
T PRK07831         95 LGRLDVLVNNAGLGGQ--TPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA  172 (262)
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence            9999999999997553  4677888999999999999999999999999998765 789999999988888889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++++++.++.|+.++||+||+|+||+++|++..... .++..+.+... .+ .+++.+|+|+|++++||+++.+.+
T Consensus       173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~-~~-~~r~~~p~~va~~~~~l~s~~~~~  249 (262)
T PRK07831        173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAR-EA-FGRAAEPWEVANVIAFLASDYSSY  249 (262)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHcCchhcC
Confidence            9999999999999999999999999999999999875432 23333343332 23 478999999999999999998899


Q ss_pred             ccccEEeeCCCc
Q 044670          234 VTGLNLVVDGGF  245 (302)
Q Consensus       234 ~~G~~~~~~gG~  245 (302)
                      ++|+++.+|+++
T Consensus       250 itG~~i~v~~~~  261 (262)
T PRK07831        250 LTGEVVSVSSQH  261 (262)
T ss_pred             cCCceEEeCCCC
Confidence            999999999975

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-40  Score=284.23  Aligned_cols=243  Identities=27%  Similarity=0.381  Sum_probs=206.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ||+++||||++|||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            689999999999999999999999999999999987766655443   35788999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .+..+.+.++|++++++|+.++++++++++++|.++ ..++||++||..+..+.++...|++||+++
T Consensus        81 ~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999996543  467788999999999999999999999999998654 368999999999888888889999999999


Q ss_pred             HHHHHHHHHHHCC-CCcEEEEEeCCcccCCcc-cCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELRQ-YGLRVNCVSPYGLVSGIS-SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.+++.++.|+.+ +||+|++|+||++.|+.. ......++..+...+. . +.+++.+++|+++++.+++++...+++|
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~va~~~~~l~~~~~~~~~g  236 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS-V-PLGRLGTPEEIAGLAYFLLSDEAAYING  236 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc-C-CCCCCCCHHHHHHHHHHHcCccccccCC
Confidence            9999999999974 799999999999996543 2222233333333332 2 2377999999999999999988889999


Q ss_pred             cEEeeCCCcccCC
Q 044670          237 LNLVVDGGFSVAN  249 (302)
Q Consensus       237 ~~~~~~gG~~~~~  249 (302)
                      +.+.+|||..+..
T Consensus       237 ~~~~~~gg~~~~~  249 (252)
T PRK07677        237 TCITMDGGQWLNQ  249 (252)
T ss_pred             CEEEECCCeecCC
Confidence            9999999976543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1e-42  Score=270.21  Aligned_cols=239  Identities=26%  Similarity=0.342  Sum_probs=216.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|+.+++||+..|||+++++.|++.|++|+.+.|++..+..+.++.+..+..+..|+++.+.+.+.+.    ..+++|.
T Consensus         5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~----~v~pidg   80 (245)
T KOG1207|consen    5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLV----PVFPIDG   80 (245)
T ss_pred             ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhc----ccCchhh
Confidence            479999999999999999999999999999999999999999998888888999999999887554443    4468999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +|||||+...  .|+.+.+.++|++.|++|+.+.+++.+...+-+.. +..|.||++||.++.++..+...||++|+|++
T Consensus        81 LVNNAgvA~~--~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALD  158 (245)
T KOG1207|consen   81 LVNNAGVATN--HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALD  158 (245)
T ss_pred             hhccchhhhc--chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHH
Confidence            9999999765  68999999999999999999999999996665543 34788999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +++|.++.|+++++||||+|+|-.|.|.|.+..+..+......+..+|.  ++|..++++.++++||+|+.++..+|.++
T Consensus       159 mlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl--~rFaEV~eVVnA~lfLLSd~ssmttGstl  236 (245)
T KOG1207|consen  159 MLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL--KRFAEVDEVVNAVLFLLSDNSSMTTGSTL  236 (245)
T ss_pred             HHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch--hhhhHHHHHHhhheeeeecCcCcccCcee
Confidence            9999999999999999999999999999999998888777777776543  88999999999999999999999999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .++|||+.
T Consensus       237 pveGGfs~  244 (245)
T KOG1207|consen  237 PVEGGFSN  244 (245)
T ss_pred             eecCCccC
Confidence            99999863

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-40  Score=285.05  Aligned_cols=244  Identities=35%  Similarity=0.502  Sum_probs=208.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+++||||++|||++++++|+++|++|+++.|+.. ......+.+   +.++.++.+|++|.+++.++++++.+.++
T Consensus         5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g   84 (261)
T PRK08936          5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG   84 (261)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999888543 333333332   45678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++ .++||++||..+..+.+++..|++||
T Consensus        85 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  162 (261)
T PRK08936         85 TLDVMINNAGIENA--VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASK  162 (261)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHH
Confidence            99999999997654  4677788999999999999999999999999997654 58999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +|++.+++.++.++.++||+|++|+||+++|++.......++........ . +.+++.+++|+++.+.||+++...+++
T Consensus       163 aa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~va~~~~~l~s~~~~~~~  240 (261)
T PRK08936        163 GGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESM-I-PMGYIGKPEEIAAVAAWLASSEASYVT  240 (261)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCcccCCcc
Confidence            99999999999999999999999999999999865433233333332222 2 347899999999999999999889999


Q ss_pred             ccEEeeCCCcccC
Q 044670          236 GLNLVVDGGFSVA  248 (302)
Q Consensus       236 G~~~~~~gG~~~~  248 (302)
                      |+.+.+|||+.+.
T Consensus       241 G~~i~~d~g~~~~  253 (261)
T PRK08936        241 GITLFADGGMTLY  253 (261)
T ss_pred             CcEEEECCCcccC
Confidence            9999999997643

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-40  Score=285.02  Aligned_cols=236  Identities=29%  Similarity=0.349  Sum_probs=201.3

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCc-----------cHHHHHHH---HhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQD-----------NLGQALAC---KLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~-----------~~~~~~~~---~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||+++||||+  +|||++++++|+++|++|++++|+.           +...+..+   ..+.++.++.+|++|++++
T Consensus         4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i   83 (256)
T PRK12859          4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP   83 (256)
T ss_pred             cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            579999999999  4999999999999999999875421           11222222   2256788999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA  144 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~  144 (302)
                      +++++++.+.++++|++|||||....  .++.+.+.++|++++++|+.+++.+.+.++|.|.++..++||++||.++..+
T Consensus        84 ~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~  161 (256)
T PRK12859         84 KELLNKVTEQLGYPHILVNNAAYSTN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGP  161 (256)
T ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCC
Confidence            99999999999999999999998654  5778899999999999999999999999999998777899999999999988


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      .+++..|++||++++.|+++++.++.++||+||+|+||++.|++..     ....+.+. ... +.++..+|+|+|++++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~-~~~-~~~~~~~~~d~a~~~~  234 (256)
T PRK12859        162 MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLL-PMF-PFGRIGEPKDAARLIK  234 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHH-hcC-CCCCCcCHHHHHHHHH
Confidence            8999999999999999999999999999999999999999998642     22222222 222 2367889999999999


Q ss_pred             HhccCCCCCccccEEeeCCCc
Q 044670          225 YLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++++...+++|+++.+|||+
T Consensus       235 ~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        235 FLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHhCccccCccCcEEEeCCCc
Confidence            999988889999999999995

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-40  Score=286.31  Aligned_cols=243  Identities=29%  Similarity=0.434  Sum_probs=210.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..++....+   +.++.++.+|++|+++++++++++.+++++
T Consensus         8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999887776655544   456889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.+++++++++|+.+++.+++.++++|.+++.++||++||..+..+.+++..|++||++
T Consensus        88 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa  165 (265)
T PRK07097         88 IDILVNNAGIIKR--IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGG  165 (265)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHH
Confidence            9999999998764  47778889999999999999999999999999987778999999999888888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      ++.++++++.|+.++||+|++|+||++.|++......     .............+ .+++.+|+|+|+++++++++...
T Consensus       166 l~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~~~~l~~~~~~  244 (265)
T PRK07097        166 LKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-AARWGDPEDLAGPAVFLASDASN  244 (265)
T ss_pred             HHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC-ccCCcCHHHHHHHHHHHhCcccC
Confidence            9999999999999999999999999999997654321     11112222222222 37789999999999999998888


Q ss_pred             CccccEEeeCCCcc
Q 044670          233 DVTGLNLVVDGGFS  246 (302)
Q Consensus       233 ~~~G~~~~~~gG~~  246 (302)
                      +++|+.+.+|||..
T Consensus       245 ~~~g~~~~~~gg~~  258 (265)
T PRK07097        245 FVNGHILYVDGGIL  258 (265)
T ss_pred             CCCCCEEEECCCce
Confidence            99999999999954

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=8.7e-40  Score=283.60  Aligned_cols=247  Identities=29%  Similarity=0.402  Sum_probs=209.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|+++||||++|||++++++|+++|++|+++.++ .+..+.+.+.   .+.++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988654 4444444333   3567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++.+++++.++|.+++ .++||++||..+..+.++...|+++|+
T Consensus        81 id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  158 (256)
T PRK12743         81 IDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKH  158 (256)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHH
Confidence            9999999998654  4567788999999999999999999999999996543 589999999999888899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++++++.++.++||++|+|+||+++|++....  ..+........  .+.++..+|+|+++++.+++++...+++|
T Consensus       159 a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~G  234 (256)
T PRK12743        159 ALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPG--IPLGRPGDTHEIASLVAWLCSEGASYTTG  234 (256)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhCccccCcCC
Confidence            999999999999999999999999999999986542  22222222221  23367889999999999999988889999


Q ss_pred             cEEeeCCCcccCCCCccc
Q 044670          237 LNLVVDGGFSVANPSLMK  254 (302)
Q Consensus       237 ~~~~~~gG~~~~~~~~~~  254 (302)
                      +++.+|||..+..+.+..
T Consensus       235 ~~~~~dgg~~~~~~~~~~  252 (256)
T PRK12743        235 QSLIVDGGFMLANPQFNS  252 (256)
T ss_pred             cEEEECCCccccCCcccc
Confidence            999999998877666543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-40  Score=285.12  Aligned_cols=239  Identities=28%  Similarity=0.356  Sum_probs=198.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|++. ..+..+.+   +.++.++.+|++|++++.++++++.+++++
T Consensus         6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (260)
T PRK12823          6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGR   84 (260)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999753 33333332   456788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..  .+..+|++||++
T Consensus        85 id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~sK~a  161 (260)
T PRK12823         85 IDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAAKGG  161 (260)
T ss_pred             CeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHHHHH
Confidence            9999999996432 2477788899999999999999999999999999877778999999987642  345689999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC------CC-----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN------SI-----NPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++.|++.++.|++++||+||+|+||+|+||+....      ..     .+...+....  ..+.+++.+|+|+|++++||
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l  239 (260)
T PRK12823        162 VNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD--SSLMKRYGTIDEQVAAILFL  239 (260)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhc--cCCcccCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999863210      00     0111222222  12347889999999999999


Q ss_pred             ccCCCCCccccEEeeCCCc
Q 044670          227 ATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++...+++|+.+++|||.
T Consensus       240 ~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        240 ASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             cCcccccccCcEEeecCCC
Confidence            9988889999999999985

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-40  Score=284.75  Aligned_cols=241  Identities=25%  Similarity=0.339  Sum_probs=202.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+++..      .+.++.++.+|++|+++++++++++.++++++|+
T Consensus         7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD------LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh------cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999986532      2346788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-CChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-~~~~Y~~sK~a~~  159 (302)
                      ||||||.......++.+.+.++|++++++|+.+++.++++++++|.+++.++||++||..+..+.+ ++..|++||++++
T Consensus        81 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~  160 (260)
T PRK06523         81 LVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALS  160 (260)
T ss_pred             EEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHH
Confidence            999999754322456778899999999999999999999999999877778999999998887755 7889999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CC-HHHHHHHHHh-ccccCCCCCCHHHHHHHHHHhccC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------IN-PAILEAFLSE-MGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .+++.++.++.++||++|+|+||+|+|++.....        .. .+..+..... ...+.+++.+|+|+|+++.||+++
T Consensus       161 ~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~s~  240 (260)
T PRK06523        161 TYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAELIAFLASD  240 (260)
T ss_pred             HHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999753210        01 1111111111 112347789999999999999998


Q ss_pred             CCCCccccEEeeCCCccc
Q 044670          230 EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~  247 (302)
                      ...+++|+.+.+|||...
T Consensus       241 ~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        241 RAASITGTEYVIDGGTVP  258 (260)
T ss_pred             ccccccCceEEecCCccC
Confidence            888999999999999653

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.2e-39  Score=282.59  Aligned_cols=240  Identities=33%  Similarity=0.453  Sum_probs=207.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+.+..++   +.++.++.+|++|.++++++++.+.+.+++
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999887766554443   456788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .+. +.+.++|++.+++|+.+++++++++.+.|.+.+.++||++||.++..+.+++..|++||++
T Consensus        89 ~d~li~~ag~~~~--~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (255)
T PRK06113         89 VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_pred             CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHH
Confidence            9999999997653  233 5788999999999999999999999999976667899999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++++++.++.++.++||+||+|+||++.|++..... .+.......+. .+ .+++.+|+|+++++++++++...+++|+
T Consensus       166 ~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~d~a~~~~~l~~~~~~~~~G~  242 (255)
T PRK06113        166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQH-TP-IRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEeccccccccccccc-CHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            999999999999999999999999999999876432 23333333332 22 3678999999999999999888899999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||..
T Consensus       243 ~i~~~gg~~  251 (255)
T PRK06113        243 ILTVSGGGV  251 (255)
T ss_pred             EEEECCCcc
Confidence            999999943

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-39  Score=281.79  Aligned_cols=243  Identities=29%  Similarity=0.380  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC-c
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK-L   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-i   78 (302)
                      +++|+++||||++|||++++++|+++|++|+++.+ +.+..+.+...++.++.++.+|++|+++++++++++.+.+++ +
T Consensus         3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i   82 (253)
T PRK08642          3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPI   82 (253)
T ss_pred             CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999988755 445555555555567889999999999999999999998887 9


Q ss_pred             cEEEEcccCCCC----CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           79 DIMYNNAGIVDR----GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        79 d~lv~~Ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      |++|||||....    ...++.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||.....+..++..|++|
T Consensus        83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s  162 (253)
T PRK08642         83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA  162 (253)
T ss_pred             eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence            999999986421    1135677889999999999999999999999999977677999999998777777778899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.+++++.++||+||+|+||++.|+...... .+.....+ .... +.+++.+|+|+|+++.+|+++...++
T Consensus       163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~~~va~~~~~l~~~~~~~~  239 (253)
T PRK08642        163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLI-AATT-PLRKVTTPQEFADAVLFFASPWARAV  239 (253)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHH-HhcC-CcCCCCCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999998654322 23333222 2222 33789999999999999999888899


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|+.+.+|||+.
T Consensus       240 ~G~~~~vdgg~~  251 (253)
T PRK08642        240 TGQNLVVDGGLV  251 (253)
T ss_pred             cCCEEEeCCCee
Confidence            999999999964

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-40  Score=290.24  Aligned_cols=244  Identities=22%  Similarity=0.286  Sum_probs=191.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCc---------cHHHH--H-----------------HHHhCCC
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQD---------NLGQA--L-----------------ACKLGED   50 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~--~-----------------~~~~~~~   50 (302)
                      ++||++|||||+  +|||+++|++|+++|++|++.++.+         +..+.  .                 .... ..
T Consensus         6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~-~~   84 (299)
T PRK06300          6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF-DT   84 (299)
T ss_pred             CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc-CC
Confidence            579999999995  9999999999999999999976531         00000  0                 0000 01


Q ss_pred             eEEEEecCCC--------HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH
Q 044670           51 VCYIHCDVTS--------EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA  122 (302)
Q Consensus        51 ~~~~~~Dl~~--------~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  122 (302)
                      .+-+.+|+.+        .++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.|+++++++++
T Consensus        85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~  164 (299)
T PRK06300         85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG  164 (299)
T ss_pred             CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence            1222222222        24689999999999999999999998754223578889999999999999999999999999


Q ss_pred             HhhccCCCCEEEEEcCcccccCCCCCh-hHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHH
Q 044670          123 RVMIPQHKGCILFTASACTEIAGIGSP-AYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILE  200 (302)
Q Consensus       123 ~~l~~~~~~~iv~~sS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  200 (302)
                      |.|.+  .|+|++++|..+..+.+++. .|++||+|++.|++.++.|+++ +||+||+|+||++.|++.......++...
T Consensus       165 p~m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~  242 (299)
T PRK06300        165 PIMNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVD  242 (299)
T ss_pred             HHhhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHH
Confidence            99964  47899999998888888765 8999999999999999999987 59999999999999998643221222222


Q ss_pred             HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       201 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                       ......+ .++..+|+|++.+++||+++...+++|+++.+|||+....
T Consensus       243 -~~~~~~p-~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~~  289 (299)
T PRK06300        243 -YYQDWAP-LPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANVMG  289 (299)
T ss_pred             -HHHhcCC-CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcceec
Confidence             2222223 3778999999999999999988999999999999987643

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=283.45  Aligned_cols=240  Identities=25%  Similarity=0.309  Sum_probs=203.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+...+.+    +.++.++.+|++|++++++++++    ++
T Consensus         5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~g   80 (259)
T PRK06125          5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----AG   80 (259)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----hC
Confidence            47899999999999999999999999999999999987766655443    35678899999999998887753    57


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++|||||....  .++.+.+.++|++++++|+.+++++++++.|.|.+++.++||++||..+..+.+++..|++||+
T Consensus        81 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~  158 (259)
T PRK06125         81 DIDILVNNAGAIPG--GGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNA  158 (259)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHH
Confidence            89999999998654  4778889999999999999999999999999998776789999999988888888889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--------CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--------SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      +++.++++++.|+.++||+||+|+||++.|++....        ...++..+.+....  +.+++.+|+|+|++++||++
T Consensus       159 al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        159 ALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGL--PLGRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccC--CcCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999964321        01122223332222  23778999999999999999


Q ss_pred             CCCCCccccEEeeCCCcccC
Q 044670          229 DEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +...+++|+.+.+|||+...
T Consensus       237 ~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        237 PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             chhccccCceEEecCCeeec
Confidence            88899999999999997644

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=281.36  Aligned_cols=242  Identities=29%  Similarity=0.422  Sum_probs=211.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||+++||||+++||++++++|+++|++|++++|+++..+++.+.+   +.++.++.+|+++++++.++++++.+.+++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999999987766655443   456889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.++..+|+.||++
T Consensus        89 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  166 (256)
T PRK06124         89 LDILVNNVGARDR--RPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQG  166 (256)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHH
Confidence            9999999997654  57778889999999999999999999999999987778999999999998888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|+.+.||++++|+||+++|++.......+..... +....+ .+++.+++|++.++++|+++...+++|+
T Consensus       167 ~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~a~~~~~l~~~~~~~~~G~  244 (256)
T PRK06124        167 LTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPW-LAQRTP-LGRWGRPEEIAGAAVFLASPAASYVNGH  244 (256)
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHH-HHhcCC-CCCCCCHHHHHHHHHHHcCcccCCcCCC
Confidence            99999999999998999999999999999975443222333222 333223 3789999999999999999988899999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||+.
T Consensus       245 ~i~~dgg~~  253 (256)
T PRK06124        245 VLAVDGGYS  253 (256)
T ss_pred             EEEECCCcc
Confidence            999999965

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-40  Score=286.68  Aligned_cols=240  Identities=31%  Similarity=0.463  Sum_probs=201.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.....      ..++.++.+|++|+++++++++++.+.++++|+
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ------HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDG   80 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc------cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999998876532      135788999999999999999999999999999


Q ss_pred             EEEcccCCCCCC-------CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           81 MYNNAGIVDRGF-------ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        81 lv~~Ag~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +|||||......       .+..+.+.++|++++++|+.+++++++++.++|.+++.++||++||..+..+.++...|+.
T Consensus        81 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (266)
T PRK06171         81 LVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAA  160 (266)
T ss_pred             EEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHH
Confidence            999999754210       1234578899999999999999999999999998777889999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCccc-CCcccCCC---------CCHH-HHHHHHHhccccCCCCCCHHHHHHH
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLV-SGISSRNS---------INPA-ILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      ||++++.+++.++.|++++||+||+|+||++. |++.....         .... ..+.+......+.+++.+|+|+|++
T Consensus       161 sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~  240 (266)
T PRK06171        161 TKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLSEVADL  240 (266)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHHHhhhh
Confidence            99999999999999999999999999999997 55432110         0111 1122221002234889999999999


Q ss_pred             HHHhccCCCCCccccEEeeCCCcc
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +.||+++.+++++|+++.+|||+.
T Consensus       241 ~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        241 VCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             eeeeeccccccceeeEEEecCccc
Confidence            999999988999999999999965

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=3.1e-39  Score=279.94  Aligned_cols=241  Identities=33%  Similarity=0.450  Sum_probs=206.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||+++||||++|||++++++|+++|++|++++|+.++..+..+..+.++.++.+|+++++++.++++++.++++++|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            47899999999999999999999999999999999887776666666667889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||.......++.+.+.++|++.+++|+.+++++++++.|+|.+. .++||++||..+..+.+++..|++||++++.
T Consensus        88 li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~  166 (255)
T PRK05717         88 LVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLA  166 (255)
T ss_pred             EEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence            999999865322466778899999999999999999999999998654 5899999999998888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.++.+ +|+|++|+||++.|++..... ..... ...... .+.+++.+|+|++.++.+++++...+++|+.+.
T Consensus       167 ~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  242 (255)
T PRK05717        167 LTHALAISLGP-EIRVNAVSPGWIDARDPSQRR-AEPLS-EADHAQ-HPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFV  242 (255)
T ss_pred             HHHHHHHHhcC-CCEEEEEecccCcCCcccccc-chHHH-HHHhhc-CCCCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence            99999999987 599999999999998754321 11111 111111 234789999999999999998877899999999


Q ss_pred             eCCCcc
Q 044670          241 VDGGFS  246 (302)
Q Consensus       241 ~~gG~~  246 (302)
                      +|||..
T Consensus       243 ~~gg~~  248 (255)
T PRK05717        243 VDGGMT  248 (255)
T ss_pred             ECCCce
Confidence            999964

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=281.71  Aligned_cols=242  Identities=30%  Similarity=0.449  Sum_probs=204.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+.. +..+.   .+.++.++.+|++++++++++++++.+++++
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   82 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIE-KLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR   82 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHH-HHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999999987532 22222   2456788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~~~~~Y~~sK~  156 (302)
                      +|++|||||....  .++.+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+ ..+.+++..|+.||+
T Consensus        83 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~  160 (263)
T PRK08226         83 IDILVNNAGVCRL--GSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA  160 (263)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHH
Confidence            9999999998653  5677788999999999999999999999999987766789999999877 356677889999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.+++.++.++.++||+|++|+||+++|++.....      ...+....+.. . .+.+++.+|+|+|++++||+++.
T Consensus       161 a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~-~p~~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        161 AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK-A-IPLRRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc-c-CCCCCCCCHHHHHHHHHHHcCch
Confidence            9999999999999999999999999999999865321      11222222222 2 23477899999999999999988


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++|+++.+|||..+
T Consensus       239 ~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        239 SSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             hcCCcCceEeECCCccc
Confidence            88999999999999653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=3.5e-39  Score=276.43  Aligned_cols=232  Identities=20%  Similarity=0.191  Sum_probs=195.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|++|||||++|||++++++|+++|++|++++|+++.........  .+.++.+|++|+++++++++++.+.++++|++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA--GAQCIQADFSTNAGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc--CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence            589999999999999999999999999999999876543333332  367889999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||....  ....+.+.++|++++++|+.+++.+++.+++.|.+++  .++||++||..+..+.+++..|++||++++.
T Consensus        80 ~~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~  157 (236)
T PRK06483         80 HNASDWLA--EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN  157 (236)
T ss_pred             ECCccccC--CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH
Confidence            99997543  2345667899999999999999999999999997665  5899999999888888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|+++ +|+||+|+||++.++...    .+...+.....  .+.++...|+|+++++.||++  ..+++|+++.
T Consensus       158 l~~~~a~e~~~-~irvn~v~Pg~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~  228 (236)
T PRK06483        158 MTLSFAAKLAP-EVKVNSIAPALILFNEGD----DAAYRQKALAK--SLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLP  228 (236)
T ss_pred             HHHHHHHHHCC-CcEEEEEccCceecCCCC----CHHHHHHHhcc--CccccCCCHHHHHHHHHHHhc--CCCcCCcEEE
Confidence            99999999988 599999999999875421    22222222222  233678899999999999996  5789999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||..+
T Consensus       229 vdgg~~~  235 (236)
T PRK06483        229 VDGGRHL  235 (236)
T ss_pred             eCccccc
Confidence            9999754

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4e-39  Score=278.19  Aligned_cols=243  Identities=26%  Similarity=0.353  Sum_probs=208.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEE-EecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||+||||++++++|+++|++|++ ..|+.+..+++.+.+   +.++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999876 477776665554433   46788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .+..+.+.+++++.+++|+.+++.++++++++|.+++.++||++||..+..+.+++..|++||+
T Consensus        82 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~  159 (250)
T PRK08063         82 RLDVFVNNAASGVL--RPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKA  159 (250)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHH
Confidence            99999999997654  5777888999999999999999999999999998777889999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++++++.++.+.||++++|+||++.|++................. . +.+++++++|+|++++++++++..+++|
T Consensus       160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~~~~~~~~~~~g  237 (250)
T PRK08063        160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAK-T-PAGRMVEPEDVANAVLFLCSPEADMIRG  237 (250)
T ss_pred             HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcC-C-CCCCCcCHHHHHHHHHHHcCchhcCccC
Confidence            9999999999999999999999999999999875433223333222222 2 2366899999999999999887778999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||..+
T Consensus       238 ~~~~~~gg~~~  248 (250)
T PRK08063        238 QTIIVDGGRSL  248 (250)
T ss_pred             CEEEECCCeee
Confidence            99999999754

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-39  Score=276.63  Aligned_cols=240  Identities=31%  Similarity=0.459  Sum_probs=206.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+...+..++++.++.++.+|++|.+++.++++.+.+.++++|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46899999999999999999999999999999999887777777777777889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .++.+.+.+++++++++|+.+++++++++.|.|..  .+++|+++|.++..+.++...|+.||++++.
T Consensus        84 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~  159 (249)
T PRK06500         84 VFINAGVAKF--APLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLS  159 (249)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHH
Confidence            9999997653  46677889999999999999999999999999853  4789999998888888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC----HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN----PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++++++.|+.++||++++|+||+++||+.......    ....+... ...+ .+++.+++|+|+++.+++++...+++|
T Consensus       160 ~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~va~~~~~l~~~~~~~~~g  237 (249)
T PRK06500        160 LAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQ-ALVP-LGRFGTPEEIAKAVLYLASDESAFIVG  237 (249)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHH-hcCC-CCCCcCHHHHHHHHHHHcCccccCccC
Confidence            99999999999999999999999999976432111    12222222 2222 367889999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+|||..
T Consensus       238 ~~i~~~gg~~  247 (249)
T PRK06500        238 SEIIVDGGMS  247 (249)
T ss_pred             CeEEECCCcc
Confidence            9999999954

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-39  Score=291.15  Aligned_cols=271  Identities=17%  Similarity=0.196  Sum_probs=210.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.++.++..+.+. .+.++.+|++|.++++++++++.+.++++|+
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~-~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~  102 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID-GVEVVMLDLADLESVRAFAERFLDSGRRIDI  102 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-hCeEEEccCCCHHHHHHHHHHHHhcCCCCCE
Confidence            478999999999999999999999999999999999887776655543 4788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------CCCCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------AGIGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------~~~~~  148 (302)
                      ||||||....   + ...+.++|+..+++|+.+++.+++.++|.|.+++.++||++||.++..            +.+++
T Consensus       103 li~nAg~~~~---~-~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~  178 (315)
T PRK06196        103 LINNAGVMAC---P-ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKW  178 (315)
T ss_pred             EEECCCCCCC---C-CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChH
Confidence            9999997642   2 345677899999999999999999999999877678999999976532            23355


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-ccCCCCCCHHHHHHHHHHhc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-NLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~  227 (302)
                      ..|+.||++++.+++.++.++.++||++++|+||++.|++.............+..... ++.+++.+|+++|.++++++
T Consensus       179 ~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~  258 (315)
T PRK06196        179 LAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQVWAA  258 (315)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHHHHHh
Confidence            78999999999999999999999999999999999999987543211111111111111 11124779999999999999


Q ss_pred             cCCCCCccccEEeeCCCcccCC------CCccccCCCccceeeccCCccccchhH
Q 044670          228 TDEASDVTGLNLVVDGGFSVAN------PSLMKFASPFHLIKAIGDGCRSFLGIS  276 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~  276 (302)
                      +.+.....|..+..|.+.....      ....+.+.+....+++|+.+.+++|++
T Consensus       259 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lW~~s~~~~~~~  313 (315)
T PRK06196        259 TSPQLAGMGGLYCEDCDIAEPTPKDAPWSGVRPHAIDPEAAARLWALSAALTGVD  313 (315)
T ss_pred             cCCccCCCCCeEeCCCcccccCCcccccCCCCcccCCHHHHHHHHHHHHHHHCCC
Confidence            7544333444454443322111      123455678888999999999988753

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-39  Score=281.16  Aligned_cols=229  Identities=25%  Similarity=0.323  Sum_probs=189.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|+++|||| +|||++++++|+ +|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 8999999999887766655444   346788999999999999999988 5688999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--------------  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--------------  145 (302)
                      +||||||+..         ..++|++++++|+.+++++++.+.|.|.+  .+++|++||.++..+.              
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~  147 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTP  147 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccc
Confidence            9999999642         23579999999999999999999999964  3678888887765432              


Q ss_pred             ----------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhcc
Q 044670          146 ----------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMG  207 (302)
Q Consensus       146 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~  207 (302)
                                      +++..|++||+|++.+++.++.|+.++||+||+|+||++.|++......  .++..+..... .
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~  226 (275)
T PRK06940        148 TEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK-S  226 (275)
T ss_pred             cccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh-C
Confidence                            2467899999999999999999999999999999999999998643211  11222233222 2


Q ss_pred             ccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          208 NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       208 ~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                       +.+++.+|+|+|++++||+++...+++|+.+.+|||...
T Consensus       227 -p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        227 -PAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             -CcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence             348899999999999999999899999999999999653

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1e-38  Score=275.01  Aligned_cols=240  Identities=25%  Similarity=0.353  Sum_probs=205.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||++|||++++++|+++|++|++.. ++........+.+   +.++..+.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999998854 3444433333332   45677889999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+.+|+
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~  158 (246)
T PRK12938         81 EIDVLVNNAGITRD--VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  158 (246)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHH
Confidence            99999999998653  4677788999999999999999999999999998777789999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.++||++++|+||++.||+....  .++..+...... + .+++.+++|+++++.|++++...+++|
T Consensus       159 a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~-~-~~~~~~~~~v~~~~~~l~~~~~~~~~g  234 (246)
T PRK12938        159 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATI-P-VRRLGSPDEIGSIVAWLASEESGFSTG  234 (246)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcC-C-ccCCcCHHHHHHHHHHHcCcccCCccC
Confidence            999999999999999999999999999999987543  233333333322 2 367899999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+|||..
T Consensus       235 ~~~~~~~g~~  244 (246)
T PRK12938        235 ADFSLNGGLH  244 (246)
T ss_pred             cEEEECCccc
Confidence            9999999954

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.3e-39  Score=289.86  Aligned_cols=264  Identities=19%  Similarity=0.212  Sum_probs=212.6

Q ss_pred             EEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            7 IITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         7 lVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      |||||++|||++++++|+++| ++|++++|+.+..+++.+.+   +.++.++.+|++|.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 99999999988777666555   24678889999999999999999998889999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccC----------------
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIA----------------  144 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~----------------  144 (302)
                      ||||+.... .+..+.+.++|+++|++|+.|++.+++.++|.|.+++  .++||++||.++..+                
T Consensus        81 nnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~  159 (308)
T PLN00015         81 CNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR  159 (308)
T ss_pred             ECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence            999985421 2456778999999999999999999999999998765  589999999876421                


Q ss_pred             -------------------CCCChhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcc-cCCcccCCCCCHHHHHHHH
Q 044670          145 -------------------GIGSPAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGL-VSGISSRNSINPAILEAFL  203 (302)
Q Consensus       145 -------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~  203 (302)
                                         ..++.+|++||+|+..+++.+++++.+ .||+|++|+||+| .|++.....  +. .....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~--~~-~~~~~  236 (308)
T PLN00015        160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHI--PL-FRLLF  236 (308)
T ss_pred             hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccccc--HH-HHHHH
Confidence                               124568999999999999999999975 6999999999999 688865432  11 11111


Q ss_pred             Hh-ccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCCccccCCCccceeeccCCccccch
Q 044670          204 SE-MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLG  274 (302)
Q Consensus       204 ~~-~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  274 (302)
                      .. ...+.+++.+|+++|+.+++++++.....+|+++..+|+........++.+.+.....++|+++++++|
T Consensus       237 ~~~~~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~~~~~~~~~~~a~d~~~~~~lw~~~~~~~~  308 (308)
T PLN00015        237 PPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGSASFENQLSQEASDAEKAKKVWEISEKLVG  308 (308)
T ss_pred             HHHHHHHhcccccHHHhhhhhhhhccccccCCCccccccCCcccccccCcChhhcCHHHHHHHHHHHHHhcC
Confidence            00 011125678999999999999988777789999998887543333466667788899999999988764

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-39  Score=278.07  Aligned_cols=242  Identities=26%  Similarity=0.339  Sum_probs=206.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+++..+.+.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999887766665544   456889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||.... ..++.+.+.++|++++++|+.+++.+++++.+.|.+. .++||++||..+..+.+++..|+++|++
T Consensus        83 ~d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a  160 (258)
T PRK07890         83 VDALVNNAFRVPS-MKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGA  160 (258)
T ss_pred             ccEEEECCccCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHH
Confidence            9999999997543 1466678899999999999999999999999998654 4799999999998888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------IN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ++.+++.++.|+.++||++++++||+++|++.....        .. +.....+...  .+.+++.+++|++++++++++
T Consensus       161 ~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~a~~~l~~  238 (258)
T PRK07890        161 LLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN--SDLKRLPTDDEVASAVLFLAS  238 (258)
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc--CCccccCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999998754211        01 2222222222  223678899999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 044670          229 DEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~  246 (302)
                      +...+++|+.+.+|||..
T Consensus       239 ~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        239 DLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HhhhCccCcEEEeCCccc
Confidence            877799999999999964

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=276.68  Aligned_cols=242  Identities=28%  Similarity=0.413  Sum_probs=203.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G-EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|++|||||+++||++++++|+++|++|++++|+....+...+.+    + .++.++.+|+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999877666554433    1 46889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|++|||||....  .++.+.+.++|++++++|+.+++++++++.+.|.+++ .++||++||..+..+.+....|++||+
T Consensus        82 id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIAKA--AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            9999999997654  4677888999999999999999999999999997765 689999999888888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCccc-CCcccCCC--------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLV-SGISSRNS--------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +++.+++.++.|++++||+|++|+||.+. +++.....        ...+......... .+.+++.+++|+++++++++
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDK-VPLKRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHh-CcccCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999999864 44433210        0111222222222 23488999999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++...+++|+.+++|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98788899999999999753

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1.9e-38  Score=274.26  Aligned_cols=237  Identities=31%  Similarity=0.422  Sum_probs=204.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||+++||++++++|+++|++|++++|+.      ....+.++.++++|++|+++++++++++.++++++|+
T Consensus         6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5789999999999999999999999999999999876      1223457889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .+..+.+.+++++.+++|+.+++++++++.+.|.+++.++||++||..+..+.++...|+.||++++.
T Consensus        80 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~  157 (252)
T PRK08220         80 LVNAAGILRM--GATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTS  157 (252)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHH
Confidence            9999998654  46777889999999999999999999999999987778899999999988888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHH--------HHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA--------ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +++.++.|+.++||+|++++||+++|++.........        ....+ .. ..+.+++.+|+|+|+++++|+++...
T Consensus       158 ~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~dva~~~~~l~~~~~~  235 (252)
T PRK08220        158 LAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF-KL-GIPLGKIARPQEIANAVLFLASDLAS  235 (252)
T ss_pred             HHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH-hh-cCCCcccCCHHHHHHHHHHHhcchhc
Confidence            9999999999999999999999999998654321111        11111 11 12347799999999999999998888


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+++.+|||..+
T Consensus       236 ~~~g~~i~~~gg~~~  250 (252)
T PRK08220        236 HITLQDIVVDGGATL  250 (252)
T ss_pred             CccCcEEEECCCeec
Confidence            999999999999764

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-38  Score=282.16  Aligned_cols=234  Identities=27%  Similarity=0.362  Sum_probs=202.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+.++.+.++++  ..+..+.+|++|+++++++++++.+.++++
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999999988887777664  345667799999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||+...  .++.+.+.++|++++++|+.+++++++.++|+|.++ .|+||++||.++..+.+++..|++||+++
T Consensus        87 d~vI~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal  163 (296)
T PRK05872         87 DVVVANAGIASG--GSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGV  163 (296)
T ss_pred             CEEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHH
Confidence            999999998654  578888999999999999999999999999998764 58999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +.+++.++.|+.++||+|++++||++.|++.............+....+.+.++..+++|+++++++++++...++++.
T Consensus       164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~~  242 (296)
T PRK05872        164 EAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYAP  242 (296)
T ss_pred             HHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEch
Confidence            9999999999999999999999999999987654322233333333444445778999999999999998766655554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-38  Score=272.80  Aligned_cols=244  Identities=38%  Similarity=0.531  Sum_probs=210.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+..+.+...+.  .++.++.+|++|+++++++++++.++++++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999999887766655543  567899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||..... .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+.||+++
T Consensus        83 d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~  161 (251)
T PRK07231         83 DILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAV  161 (251)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHH
Confidence            9999999975431 456678899999999999999999999999999877789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC--HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN--PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.+++.++.++.++||++++++||++.|++.......  +.....+... .+ .+++.+++|+|+++++++++...+++|
T Consensus       162 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (251)
T PRK07231        162 ITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT-IP-LGRLGTPEDIANAALFLASDEASWITG  239 (251)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC-CC-CCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            9999999999998899999999999999986543221  1222223222 22 367899999999999999887788999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||..+
T Consensus       240 ~~~~~~gg~~~  250 (251)
T PRK07231        240 VTLVVDGGRCV  250 (251)
T ss_pred             CeEEECCCccC
Confidence            99999999654

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-38  Score=302.06  Aligned_cols=246  Identities=35%  Similarity=0.490  Sum_probs=212.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            36899999999999999999999999999999999988888877777777888999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||+......++.+.+.++|++++++|+.+++.++++++|+|.+++.+ +||++||..+..+.+++..|++||++++
T Consensus        83 li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~  162 (520)
T PRK06484         83 LVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVI  162 (520)
T ss_pred             EEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHH
Confidence            999999753222466788899999999999999999999999999765554 9999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH-HHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI-LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      .+++.++.|+.++||+|++|+||++.|++.......... ....... .+ .+++.+++|+++++.+++++...+++|+.
T Consensus       163 ~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~va~~v~~l~~~~~~~~~G~~  240 (520)
T PRK06484        163 SLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSR-IP-LGRLGRPEEIAEAVFFLASDQASYITGST  240 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhc-CC-CCCCcCHHHHHHHHHHHhCccccCccCce
Confidence            999999999999999999999999999986543211111 1111222 22 36688999999999999998888999999


Q ss_pred             EeeCCCcccC
Q 044670          239 LVVDGGFSVA  248 (302)
Q Consensus       239 ~~~~gG~~~~  248 (302)
                      +.+|||+...
T Consensus       241 ~~~~gg~~~~  250 (520)
T PRK06484        241 LVVDGGWTVY  250 (520)
T ss_pred             EEecCCeecc
Confidence            9999997654

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=274.23  Aligned_cols=240  Identities=30%  Similarity=0.413  Sum_probs=207.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||+||||++++++|+++|++|++++|+.+..+.+...+   +.++.++.+|++++++++++++++.+.+++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            47899999999999999999999999999999999988776665543   356889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--------CCEEEEEcCcccccCCCCCh
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--------KGCILFTASACTEIAGIGSP  149 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~iv~~sS~~~~~~~~~~~  149 (302)
                      +|++|||||....  .++.+.+.++|+.++++|+.+++++++++.+.|.++.        .+++|++||..+..+.+...
T Consensus        87 ~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         87 IDILVNNSGVSTT--QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            9999999997653  4666778899999999999999999999999886543        47999999998888888889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .|+.+|++++.+++.++.++.++||+|++|+||+|+|++...... ...... ..+..+ .+++..|+|+++.+.||+++
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~-~~~~~~-~~~~~~p~~~~~~~~~l~~~  241 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQK-LVSMLP-RKRVGKPEDLDGLLLLLAAD  241 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHH-HHhcCC-CCCCcCHHHHHHHHHHHhCh
Confidence            999999999999999999999999999999999999998764322 122222 222223 37899999999999999998


Q ss_pred             CCCCccccEEeeCCCc
Q 044670          230 EASDVTGLNLVVDGGF  245 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~  245 (302)
                      .+.+++|+.+.+|||+
T Consensus       242 ~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        242 ESQFINGAIISADDGF  257 (258)
T ss_pred             hhcCCCCcEEEeCCCC
Confidence            8899999999999996

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-38  Score=274.24  Aligned_cols=242  Identities=37%  Similarity=0.526  Sum_probs=204.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||+++||||++|||.+++++|+++|++|++++|+....+...+.++.  .++.+|++|+++++++++++.+.++++|+
T Consensus         5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~~~~~~~~id~   82 (255)
T PRK06057          5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGG--LFVPTDVTDEDAVNALFDTAAETYGSVDI   82 (255)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCC--cEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999999999999988776666555433  67899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-CCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~~~~~Y~~sK~a~~  159 (302)
                      +|||||.......++.+.+.+++++++++|+.+++++++.++|.|.+++.++||++||..+..+. +++..|+.||++++
T Consensus        83 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~  162 (255)
T PRK06057         83 AFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVL  162 (255)
T ss_pred             EEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHH
Confidence            99999976432235667788999999999999999999999999987777899999998776655 36788999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      .+++.++.++.++||++++|+||+++|++...... .+.........  .+.+++.+|+|+++++.+++++...+++|+.
T Consensus       163 ~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~  240 (255)
T PRK06057        163 AMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVH--VPMGRFAEPEEIAAAVAFLASDDASFITAST  240 (255)
T ss_pred             HHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence            99999999999899999999999999998654322 12222222222  2236789999999999999998889999999


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.+|||..
T Consensus       241 ~~~~~g~~  248 (255)
T PRK06057        241 FLVDGGIS  248 (255)
T ss_pred             EEECCCee
Confidence            99999964

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-39  Score=277.01  Aligned_cols=189  Identities=29%  Similarity=0.399  Sum_probs=172.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCC-eEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GED-VCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~-~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +.||+|+|||||+|||.++|.+|+++|++++++.|...+++.+.+++    ... +.++++|++|+++++++++++..++
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            57999999999999999999999999999999988887777664443    344 8999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      |++|+||||||+...  ....+.+.+++..+|++|+.|+..++++++|+|++++.|+||++||+++..+.|....|++||
T Consensus        90 g~vDvLVNNAG~~~~--~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK  167 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLV--GFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASK  167 (282)
T ss_pred             CCCCEEEecCccccc--cccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHH
Confidence            999999999999873  567778889999999999999999999999999988789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCC--cEEEEEeCCcccCCcccCC
Q 044670          156 YGIIALVKILAAELRQYG--LRVNCVSPYGLVSGISSRN  192 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~  192 (302)
                      .|++.|..+|+.|+.+.+  |++ .|+||+|.|++....
T Consensus       168 ~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  168 HALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             HHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            999999999999999877  555 999999999977554

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-38  Score=273.87  Aligned_cols=243  Identities=29%  Similarity=0.388  Sum_probs=202.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.. +..+.+   +.++.++.+|+++++++.++++++.+.+++
T Consensus         5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (258)
T PRK08628          5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGR   83 (258)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5799999999999999999999999999999999987765 333332   457889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  ..+.... ++|++.+++|+.+++.+++.+.+.+.+. .++||++||..+..+.+++..|+.||++
T Consensus        84 id~vi~~ag~~~~--~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  159 (258)
T PRK08628         84 IDGLVNNAGVNDG--VGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGA  159 (258)
T ss_pred             CCEEEECCcccCC--CcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHH
Confidence            9999999997543  2344444 8999999999999999999999988654 5899999999998888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHH-HHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPA-ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ++.+++.++.|+.++||++++|+||+++|++.....   ..+. ........ .+...++.+|+|+|+++++++++...+
T Consensus       160 ~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        160 QLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK-IPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc-CCccccCCCHHHHHHHHHHHhChhhcc
Confidence            999999999999999999999999999999754321   1111 11222222 222246899999999999999988888


Q ss_pred             ccccEEeeCCCcccCC
Q 044670          234 VTGLNLVVDGGFSVAN  249 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~  249 (302)
                      ++|+.+.+|||.+...
T Consensus       239 ~~g~~~~~~gg~~~~~  254 (258)
T PRK08628        239 TTGQWLFVDGGYVHLD  254 (258)
T ss_pred             ccCceEEecCCccccc
Confidence            9999999999976543

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.8e-38  Score=272.10  Aligned_cols=242  Identities=28%  Similarity=0.417  Sum_probs=208.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||+||||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|+++++++.++++++.+.+++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999887766655544   456888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||....  .++.+.+.+++++++++|+.+++.+++++.++|.+ ++.++||++||.++..+.++...|++||+
T Consensus        88 id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  165 (263)
T PRK07814         88 LDIVVNNVGGTMP--NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKA  165 (263)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHH
Confidence            9999999997543  46777889999999999999999999999999976 45789999999999888899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|+.+ +|++++|+||++.|++................. .+ ..+..+++|+|++++|++++...+++|
T Consensus       166 a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~va~~~~~l~~~~~~~~~g  242 (263)
T PRK07814        166 ALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVAANDELRAPMEKA-TP-LRRLGDPEDIAAAAVYLASPAGSYLTG  242 (263)
T ss_pred             HHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhccCCHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHcCccccCcCC
Confidence            999999999999987 699999999999999765332223333333222 22 256789999999999999988888999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||...
T Consensus       243 ~~~~~~~~~~~  253 (263)
T PRK07814        243 KTLEVDGGLTF  253 (263)
T ss_pred             CEEEECCCccC
Confidence            99999999665

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-38  Score=273.73  Aligned_cols=243  Identities=25%  Similarity=0.315  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||++|||.+++++|+++|++|++++|+.+......+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999877665544333   346788899999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.++|++++++|+.+++++++++++.|.++ .++||++||.++..+.+++..|++||++
T Consensus        87 iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a  163 (264)
T PRK07576         87 IDVLVSGAAGNFP--APAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAG  163 (264)
T ss_pred             CCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHH
Confidence            9999999986543  466778899999999999999999999999998654 4899999999888888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.|++.++.|+.++||+|++|+||++. |+...... ............. +.++..+|+|+|+.+++++++...+++|
T Consensus       164 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~~~~~~G  241 (264)
T PRK07576        164 VDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA-PSPELQAAVAQSV-PLKRNGTKQDIANAALFLASDMASYITG  241 (264)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc-cCHHHHHHHHhcC-CCCCCCCHHHHHHHHHHHcChhhcCccC
Confidence            9999999999999999999999999997 44332221 1222222222222 3377899999999999999987889999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +.+.+|||+.+.
T Consensus       242 ~~~~~~gg~~~~  253 (264)
T PRK07576        242 VVLPVDGGWSLG  253 (264)
T ss_pred             CEEEECCCcccC
Confidence            999999997543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=7e-38  Score=270.32  Aligned_cols=242  Identities=30%  Similarity=0.478  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+|+||++++++|+++|++|++++|+.+....+...+   +.++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999887766554433   456889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.+++++++++|+.+++++++.+.+.|.+++.+++|++||.++..+.++...|+.+|++
T Consensus        81 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a  158 (250)
T TIGR03206        81 VDVLVNNAGWDKF--GPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGG  158 (250)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHH
Confidence            9999999997543  46677788999999999999999999999999987777899999999998888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHH-HHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPA-ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ++.+++.++.++.+.||++++++||+++|++.....   ..+. ....+.... + .+++.+++|+|+++.+++++...+
T Consensus       159 ~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~dva~~~~~l~~~~~~~  236 (250)
T TIGR03206       159 LVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAI-P-LGRLGQPDDLPGAILFFSSDDASF  236 (250)
T ss_pred             HHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcC-C-ccCCcCHHHHHHHHHHHcCcccCC
Confidence            999999999999888999999999999999765431   1222 223333332 2 367899999999999999998889


Q ss_pred             ccccEEeeCCCcc
Q 044670          234 VTGLNLVVDGGFS  246 (302)
Q Consensus       234 ~~G~~~~~~gG~~  246 (302)
                      ++|+++.+|||+.
T Consensus       237 ~~g~~~~~~~g~~  249 (250)
T TIGR03206       237 ITGQVLSVSGGLT  249 (250)
T ss_pred             CcCcEEEeCCCcc
Confidence            9999999999964

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.2e-38  Score=269.79  Aligned_cols=242  Identities=31%  Similarity=0.386  Sum_probs=209.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||+|+||++++++|+++|++|++++|+++..+...+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999887766555443   356889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .+..+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.++...|+.+|++
T Consensus        85 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~  162 (250)
T PRK12939         85 LDGLVNNAGITNS--KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGA  162 (250)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHH
Confidence            9999999998654  46677888999999999999999999999999987778899999999998888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.++.+.+|++++|+||++.|++...... ......+... . +.+++.+++|+|++++++++....+++|+
T Consensus       163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~G~  239 (250)
T PRK12939        163 VIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKG-R-ALERLQVPDDVAGAVLFLLSDAARFVTGQ  239 (250)
T ss_pred             HHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHhCccccCccCc
Confidence            9999999999999889999999999999998765321 1232223222 2 23778999999999999998877889999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .+.+|||+.+
T Consensus       240 ~i~~~gg~~~  249 (250)
T PRK12939        240 LLPVNGGFVM  249 (250)
T ss_pred             EEEECCCccc
Confidence            9999999653

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=6.6e-38  Score=269.58  Aligned_cols=240  Identities=32%  Similarity=0.447  Sum_probs=207.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||+||||++++++|+++|+.|++.+|+.+..+.+....+.++.++.+|+++.++++++++++.+.++++|+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999999888777766666667889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .+..+.+.++|++++++|+.+++++++++.+.+.+++.+++|++||..+..+.++...|+.+|++++.
T Consensus        84 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~  161 (245)
T PRK12936         84 LVNNAGITKD--GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIG  161 (245)
T ss_pred             EEECCCCCCC--CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHH
Confidence            9999998654  45667788999999999999999999999998876667899999999888888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.++.+.|+++++++||+++|++....  .+...+.... . .+.+++.+++|+++++.+++++...+++|+.+.
T Consensus       162 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~-~-~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~  237 (245)
T PRK12936        162 FSKSLAQEIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMG-A-IPMKRMGTGAEVASAVAYLASSEAAYVTGQTIH  237 (245)
T ss_pred             HHHHHHHHhhHhCeEEEEEEECcCcCchhccc--ChHHHHHHhc-C-CCCCCCcCHHHHHHHHHHHcCccccCcCCCEEE
Confidence            99999999998999999999999999876432  1222111212 1 223678899999999999998877789999999


Q ss_pred             eCCCcc
Q 044670          241 VDGGFS  246 (302)
Q Consensus       241 ~~gG~~  246 (302)
                      +|||..
T Consensus       238 ~~~g~~  243 (245)
T PRK12936        238 VNGGMA  243 (245)
T ss_pred             ECCCcc
Confidence            999965

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-38  Score=269.79  Aligned_cols=243  Identities=40%  Similarity=0.525  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|+++||||+|+||++++++|+++|++|++++|+.+......+.+  +.++.++.+|++|+++++++++++.++++++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999999987766655544  4568899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||....  .+..+.+.+++++++++|+.+++.+++.+++.|++++.++|+++||..+..+.++...|+.+|+++
T Consensus        83 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~  160 (252)
T PRK06138         83 DVLVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAI  160 (252)
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHH
Confidence            999999998654  466778899999999999999999999999999877788999999998888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +.+++.++.|+.++||++++++||++.|++..+...   .+........... +.+++.+++|++++++++++....+++
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~~~~~~~~  239 (252)
T PRK06138        161 ASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARH-PMNRFGTAEEVAQAALFLASDESSFAT  239 (252)
T ss_pred             HHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcC-CCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999889999999999999998654321   1222222222222 235688999999999999988788899


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |+.+.+|||+.
T Consensus       240 g~~~~~~~g~~  250 (252)
T PRK06138        240 GTTLVVDGGWL  250 (252)
T ss_pred             CCEEEECCCee
Confidence            99999999965

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=7.6e-38  Score=271.10  Aligned_cols=238  Identities=29%  Similarity=0.442  Sum_probs=198.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-----EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++|+++||||++|||+++++.|+++|++|++++|+++..+.....+.     ..+.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            579999999999999999999999999999999999887766655441     245677999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC-CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC--------
Q 044670           76 GKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI--------  146 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--------  146 (302)
                      +++|+|||||+..... ..++.+.+.+++++.+++|+.+++.+++++++.|.+++.++||++||.++..+..        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            9999999999764321 1356778899999999999999999999999999877788999999987654311        


Q ss_pred             --CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          147 --GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       147 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                        ....|++||++++++++.++.|+.++||+|++|+||++.++..      ..+...+... . +.+++.+++|+|++++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~-~-~~~~~~~~~dva~~~~  233 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKC-C-NGKGMLDPDDICGTLV  233 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhc-C-CccCCCCHHHhhhhHh
Confidence              2236999999999999999999999999999999999987641      2222222222 1 2266899999999999


Q ss_pred             HhccCCCCCccccEEeeCCCcc
Q 044670          225 YLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++++...+++|+.+.+|||+.
T Consensus       234 ~l~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        234 FLLSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             heeccccccccCceEEecCCcc
Confidence            9999888899999999999964

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-37  Score=270.01  Aligned_cols=240  Identities=34%  Similarity=0.490  Sum_probs=204.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||+|+||.+++++|+++|++|++++|+.+..+.....+   +.++.++.+|++|+++++++++++.+.+++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999887766555443   356788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh-hccCCCCEEEEEcCcccccCCCC----ChhHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV-MIPQHKGCILFTASACTEIAGIG----SPAYT  152 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~iv~~sS~~~~~~~~~----~~~Y~  152 (302)
                      +|++|||||....  .+..+.+.++|++++++|+.+++++++++.++ |.+++.+++|++||..+..+.++    ...|+
T Consensus        90 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~  167 (259)
T PRK08213         90 VDILVNNAGATWG--APAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYN  167 (259)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHH
Confidence            9999999997543  46667788999999999999999999999998 76666789999999877665543    48899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      .||++++.++++++.++.++||++++++||++.|++....  .+...+..... .+ .+++.+++|++.++.+++++...
T Consensus       168 ~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~-~~-~~~~~~~~~va~~~~~l~~~~~~  243 (259)
T PRK08213        168 TSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT--LERLGEDLLAH-TP-LGRLGDDEDLKGAALLLASDASK  243 (259)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh--hHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHhCcccc
Confidence            9999999999999999999999999999999999876543  23333333332 22 36788999999999999999888


Q ss_pred             CccccEEeeCCCcc
Q 044670          233 DVTGLNLVVDGGFS  246 (302)
Q Consensus       233 ~~~G~~~~~~gG~~  246 (302)
                      +++|+.+.+|||..
T Consensus       244 ~~~G~~~~~~~~~~  257 (259)
T PRK08213        244 HITGQILAVDGGVS  257 (259)
T ss_pred             CccCCEEEECCCee
Confidence            99999999999965

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-37  Score=273.81  Aligned_cols=241  Identities=31%  Similarity=0.375  Sum_probs=204.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+... .+.....+   +.++.++.+|++|.++++++++++.+.++
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999987543 33333222   45688899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||.... ..++.+.+.++|++++++|+.+++.+++++++.|.+  .++||++||.++..+.+++..|++||+
T Consensus       124 ~iD~lI~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~  200 (290)
T PRK06701        124 RLDILVNNAAFQYP-QQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKG  200 (290)
T ss_pred             CCCEEEECCcccCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHH
Confidence            99999999997543 135677889999999999999999999999999853  479999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++++++.++.++||+|++|+||+++|++..... .++....+... . +.+++.+++|+|+++++++++...+++|
T Consensus       201 a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~ll~~~~~~~~G  277 (290)
T PRK06701        201 AIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGSN-T-PMQRPGQPEELAPAYVFLASPDSSYITG  277 (290)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHHhc-C-CcCCCcCHHHHHHHHHHHcCcccCCccC
Confidence            9999999999999999999999999999999765432 23333333322 2 2377899999999999999988889999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||+..
T Consensus       278 ~~i~idgg~~~  288 (290)
T PRK06701        278 QMLHVNGGVIV  288 (290)
T ss_pred             cEEEeCCCccc
Confidence            99999999754

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-38  Score=283.48  Aligned_cols=271  Identities=18%  Similarity=0.207  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.++.++..+++     +.++.++.+|++|.++++++++++.+++
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999999999999988776655544     2468899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------  144 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------  144 (302)
                      +++|+||||||....   +..+.+.++++.+|++|+.|++.+++.++|.|.+. .++||++||.++..+           
T Consensus        92 ~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~  167 (313)
T PRK05854         92 RPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWER  167 (313)
T ss_pred             CCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccc
Confidence            999999999998653   34456788999999999999999999999999754 689999999877543           


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHH--CCCCcEEEEEeCCcccCCcccCCCC----CHHHHHHHHHhccccCCCCCCHH
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAEL--RQYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMGNLRGQVLNAE  217 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~--~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~  217 (302)
                       .+++..|+.||+++++|++++++++  ..+||+||+++||+|.|++......    .+.....+..........+.+++
T Consensus       168 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (313)
T PRK05854        168 SYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTVE  247 (313)
T ss_pred             cCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCHH
Confidence             2456789999999999999999864  4578999999999999998654211    11112122221110001245899


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCcccCCC----CccccCCCccceeeccCCccccchhH
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSVANP----SLMKFASPFHLIKAIGDGCRSFLGIS  276 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~  276 (302)
                      +.+...++++..+.. .+|.++.-++......+    .....+.++..++++|+.+.+++|+.
T Consensus       248 ~ga~~~l~~a~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lw~~s~~~~~~~  309 (313)
T PRK05854        248 SAILPALYAATSPDA-EGGAFYGPRGPGELGGGPVEQALYPPLRRNAEAARLWEVSEQLTGVS  309 (313)
T ss_pred             HHHHHhhheeeCCCC-CCCcEECCCcccccCCCcccCCCCcccCCHHHHHHHHHHHHHHHCCC
Confidence            999999998865432 24666644432222111    12233457788899999999988754

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=266.92  Aligned_cols=231  Identities=28%  Similarity=0.417  Sum_probs=191.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |++|++|||||+||||++++++|+++|++|+++.|+ .+..+++....+  ..++.+|++|++++.++++    .++++|
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~--~~~~~~D~~~~~~~~~~~~----~~~~id   77 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG--ATAVQTDSADRDAVIDVVR----KSGALD   77 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC--CeEEecCCCCHHHHHHHHH----HhCCCc
Confidence            468999999999999999999999999999988664 444555544433  4678899999998777664    357899


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .+..+.+.++|++++++|+.+++.+++.+.++|.+  .++||++||..+. .+.+++..|+.||+++
T Consensus        78 ~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~  153 (237)
T PRK12742         78 ILVVNAGIAVF--GDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSAL  153 (237)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHH
Confidence            99999997653  45667788999999999999999999999999853  5899999998774 5677889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.++.++||+||+|+||+++|++.....   ... .......+ .+++.+|+|+++++.||+++...+++|+.
T Consensus       154 ~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~-~~~~~~~~-~~~~~~p~~~a~~~~~l~s~~~~~~~G~~  228 (237)
T PRK12742        154 QGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMK-DMMHSFMA-IKRHGRPEEVAGMVAWLAGPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHH-HHHHhcCC-CCCCCCHHHHHHHHHHHcCcccCcccCCE
Confidence            99999999999999999999999999999864321   121 22222223 37789999999999999999889999999


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.+|||+.
T Consensus       229 ~~~dgg~~  236 (237)
T PRK12742        229 HTIDGAFG  236 (237)
T ss_pred             EEeCCCcC
Confidence            99999964

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1e-37  Score=271.10  Aligned_cols=244  Identities=27%  Similarity=0.426  Sum_probs=206.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+|+||++++++|+++|++|++++|+++..++..+.+   +.++.++.+|++|.++++++++++.+.+++
T Consensus         5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999987666655443   456788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhh-ccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM-IPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.| ...+.++||++||..+..+.++...|+.||+
T Consensus        85 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~  162 (262)
T PRK13394         85 VDILVSNAGIQIV--NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKH  162 (262)
T ss_pred             CCEEEECCccCCC--CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHH
Confidence            9999999998653  466677889999999999999999999999999 6666789999999988888888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +++.+++.++.++.+.+|++++++||+++|++......         ..+....++.... ..+++++++|+++++++++
T Consensus       163 a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~dva~a~~~l~  241 (262)
T PRK13394        163 GLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKT-VDGVFTTVEDVAQTVLFLS  241 (262)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCC-CCCCCCCHHHHHHHHHHHc
Confidence            99999999999999889999999999999997543210         0112222222221 2367999999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.....++|+.+.+|+|+.+
T Consensus       242 ~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        242 SFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             CccccCCcCCEEeeCCceec
Confidence            87777889999999999653

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=271.66  Aligned_cols=244  Identities=28%  Similarity=0.344  Sum_probs=208.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+     +.++.++.+|++|++++.++++++.+++
T Consensus         5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (276)
T PRK05875          5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH   84 (276)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999877666554443     2467889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|++|||||.... ..++.+.+.+++++++++|+.+++.+++++++.|.+++.++|+++||..+..+.++...|+.||
T Consensus        85 ~~~d~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  163 (276)
T PRK05875         85 GRLHGVVHCAGGSET-IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTK  163 (276)
T ss_pred             CCCCEEEECCCcccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHH
Confidence            999999999997532 1356677889999999999999999999999999776678999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.++...+|++++|+||+++|++.............+...  .+.+++.+++|+++++.++++....+++
T Consensus       164 ~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~  241 (276)
T PRK05875        164 SAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRAC--TPLPRVGEVEDVANLAMFLLSDAASWIT  241 (276)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcC--CCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            99999999999999999999999999999999875443232322222222  2236788999999999999998888899


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+++++|||..+
T Consensus       242 g~~~~~~~g~~~  253 (276)
T PRK05875        242 GQVINVDGGHML  253 (276)
T ss_pred             CCEEEECCCeec
Confidence            999999999775

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-37  Score=268.92  Aligned_cols=237  Identities=24%  Similarity=0.290  Sum_probs=200.7

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecC-----------ccHHHHHHH---HhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQ-----------DNLGQALAC---KLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~-----------~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |++|++|||||++  |||.+++++|+++|++|++++|+           ......+..   ..+.+++++.+|+++++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            5789999999995  89999999999999999999987           221111222   2245789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA  144 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~  144 (302)
                      +++++++.+.++++|+||||||....  .+..+.+.+++++.+++|+.+++++++++.+.|.++..++||++||..+..+
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYSTH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            99999999999999999999998654  4677788999999999999999999999999987766789999999988888


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      .++...|++||++++.+++.++.|+.++||+|++|+||.+.|++...     ......... .+ ..++..|+|+|+++.
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~-~~-~~~~~~~~~~a~~~~  233 (256)
T PRK12748        161 MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPK-FP-QGRVGEPVDAARLIA  233 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhcc-CC-CCCCcCHHHHHHHHH
Confidence            88889999999999999999999999899999999999999986532     122222221 12 256789999999999


Q ss_pred             HhccCCCCCccccEEeeCCCcc
Q 044670          225 YLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++++....++|+++.+|||+.
T Consensus       234 ~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        234 FLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHhCcccccccCCEEEecCCcc
Confidence            9999888889999999999964

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.7e-38  Score=267.78  Aligned_cols=232  Identities=27%  Similarity=0.415  Sum_probs=195.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+....      ...++.++.+|++++      ++++.+.++++|+
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~~~~~~~~~~D~~~~------~~~~~~~~~~id~   70 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------LSGNFHFLQLDLSDD------LEPLFDWVPSVDI   70 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------cCCcEEEEECChHHH------HHHHHHhhCCCCE
Confidence            5789999999999999999999999999999999875432      134678899999987      5555566789999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||.... ..++.+.+.+++++++++|+.+++++++++++.+.+++.++||++||..+..+.++...|+.+|++++.
T Consensus        71 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  149 (235)
T PRK06550         71 LCNTAGILDD-YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAG  149 (235)
T ss_pred             EEECCCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHH
Confidence            9999997532 146677889999999999999999999999999987778899999999998888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|+.++||++++|+||+++|++............. ..... +.+++.+++|+|++++|++++...+++|+.+.
T Consensus       150 ~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~~  227 (235)
T PRK06550        150 FTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADW-VARET-PIKRWAEPEEVAELTLFLASGKADYMQGTIVP  227 (235)
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHH-HhccC-CcCCCCCHHHHHHHHHHHcChhhccCCCcEEE
Confidence            99999999999999999999999999976543322222222 22222 34778999999999999999888899999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       228 ~~gg~~~  234 (235)
T PRK06550        228 IDGGWTL  234 (235)
T ss_pred             ECCceec
Confidence            9999653

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.5e-38  Score=265.25  Aligned_cols=214  Identities=27%  Similarity=0.442  Sum_probs=193.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++|++||||||++|||+++|.+|+++|+++++.+.+.+..++..+.+.  ++++.+.||++|.+++.+.++++.+++|++
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            479999999999999999999999999999999999988887776664  479999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||+...  .++.+.+.+++++++++|+.|+|+.+++++|.|.+...|.||.++|+++..+.++..+|++||.|+
T Consensus       116 ~ILVNNAGI~~~--~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~  193 (300)
T KOG1201|consen  116 DILVNNAGIVTG--KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAA  193 (300)
T ss_pred             eEEEeccccccC--CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHH
Confidence            999999999986  688899999999999999999999999999999998999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC---CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          159 IALVKILAAELR---QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       159 ~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .+|.+++..|+.   .+||+.+.|+|+++.|+|.......+           . .-...+|+.+|+.++....
T Consensus       194 vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~~~-----------~-l~P~L~p~~va~~Iv~ai~  254 (300)
T KOG1201|consen  194 VGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATPFP-----------T-LAPLLEPEYVAKRIVEAIL  254 (300)
T ss_pred             HHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCCCc-----------c-ccCCCCHHHHHHHHHHHHH
Confidence            999999999985   45799999999999999987521111           1 1347799999999987774

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-37  Score=267.85  Aligned_cols=244  Identities=37%  Similarity=0.504  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||+|+||++++++|+++|++|++++|+.+..+.....+   +.++.++.+|++|++++.++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988776655444   467889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .+..+.+.+++++++++|+.+++.+++.+++.|.+++.++||++||..+..+.++...|+++|++
T Consensus        82 ~d~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a  159 (258)
T PRK12429         82 VDILVNNAGIQHV--APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHG  159 (258)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHH
Confidence            9999999997654  46677788999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ++.+++.++.++.+.+|++++++||++.||+......         ............. +.+++++++|+|++++++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~~~~~l~~  238 (258)
T PRK12429        160 LIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLV-PQKRFTTVEEIADYALFLAS  238 (258)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccC-CccccCCHHHHHHHHHHHcC
Confidence            9999999999999899999999999999987643210         1111122222221 23679999999999999998


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +....++|+.+.+|||+..
T Consensus       239 ~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        239 FAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             ccccCccCCeEEeCCCEec
Confidence            7777889999999999753

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=2.3e-37  Score=267.85  Aligned_cols=239  Identities=30%  Similarity=0.455  Sum_probs=205.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+++||||+|+||.+++++|+++|++|++++|+.+..++....+   +.++.++.+|++|++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999877666555443   456888999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++.+++.+++.|.+.+ .++||++||..+..+.+....|+.||++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVAPI--TPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            9999998654  4777888999999999999999999999999987754 479999999999888899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---------HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---------PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++.++.|+.+.||+|++++||++.|++.......         ......+...  .+.+++.+|+|+++++.+|+++.
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~~~~~l~~~~  236 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSE--IALGRPSEPEDVAGLVSFLASED  236 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhh--CCCCCCCCHHHHHHHHHhhcccc
Confidence            999999999999999999999999999985432100         1112222222  22377999999999999999988


Q ss_pred             CCCccccEEeeCCCcc
Q 044670          231 ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~  246 (302)
                      ..+++|+++.+|||+.
T Consensus       237 ~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       237 SDYITGQSILVDGGMV  252 (254)
T ss_pred             cCCccCcEEEecCCcc
Confidence            8899999999999964

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-37  Score=270.18  Aligned_cols=241  Identities=23%  Similarity=0.345  Sum_probs=190.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc----cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD----NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |++|+++||||++|||++++++|+++|++|+++.++.    +..+...+.+   +.++.++++|++|+++++++++++.+
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            3679999999999999999999999999977665432    2233333322   45788899999999999999999999


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      .++++|++|||||....  .++.+.+.+++++++++|+.+++.+++++.+.|.+  .+++++++|+....+.+++..|++
T Consensus        86 ~~~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~~~~~~~~Y~~  161 (257)
T PRK12744         86 AFGRPDIAINTVGKVLK--KPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGAFTPFYSAYAG  161 (257)
T ss_pred             hhCCCCEEEECCcccCC--CCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcccCCCcccchh
Confidence            99999999999998654  46777889999999999999999999999999854  367777643333334577889999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH--HHHHhcccc-CCCCCCHHHHHHHHHHhccCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE--AFLSEMGNL-RGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ||++++.|+++++.|+.++||+|++++||++.|++...... ++...  .......+. ..++.+++|+++++.+++++ 
T Consensus       162 sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-  239 (257)
T PRK12744        162 SKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEG-AEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-  239 (257)
T ss_pred             hHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccc-cchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-
Confidence            99999999999999999999999999999999997644221 11110  001111111 13688999999999999985 


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++|+++.+|||+..
T Consensus       240 ~~~~~g~~~~~~gg~~~  256 (257)
T PRK12744        240 GWWITGQTILINGGYTT  256 (257)
T ss_pred             cceeecceEeecCCccC
Confidence            56889999999999653

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=7.8e-38  Score=279.04  Aligned_cols=271  Identities=18%  Similarity=0.144  Sum_probs=208.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLG---EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|+++||||++|||++++++|+++| ++|++++|+.++.+++.+.+.   ..+.++.+|++|.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            58899999999999999999999999 999999999887776665552   45778899999999999999999988899


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccC-----------
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIA-----------  144 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~-----------  144 (302)
                      +|++|||||+.... .+..+.+.++|++++++|+.+++.+++.++|.|.+++  .++||++||.++...           
T Consensus        82 iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        82 LDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            99999999975421 2334568899999999999999999999999997653  489999999876421           


Q ss_pred             ----------------------CCCChhHHHHHHHHHHHHHHHHHHHC-CCCcEEEEEeCCcc-cCCcccCCCCCHHHHH
Q 044670          145 ----------------------GIGSPAYTVSKYGIIALVKILAAELR-QYGLRVNCVSPYGL-VSGISSRNSINPAILE  200 (302)
Q Consensus       145 ----------------------~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~  200 (302)
                                            ..++.+|++||+|+..+++++++++. +.||+|++|+||+| .|++............
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                                  12456799999999999999999985 46899999999999 5888754321111110


Q ss_pred             HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCCccccCCCccceeeccCCccccchh
Q 044670          201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       201 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  275 (302)
                      .......  .+.+.++++.|+.+++++.+.....+|.++..++.........++.+.++..++.+|+++++++|+
T Consensus       241 ~~~~~~~--~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  313 (314)
T TIGR01289       241 PPFQKYI--TKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGNRQESFVNQLSEEVSDDSKASKMWDLSEKLVGL  313 (314)
T ss_pred             HHHHHHH--hccccchhhhhhhhHHhhcCcccCCCceeeecCCcccccccCCChhhcCHHHHHHHHHHHHHHhcc
Confidence            1111111  134679999999999988754433467666543332111124555577889999999999998875

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-37  Score=264.11  Aligned_cols=238  Identities=30%  Similarity=0.449  Sum_probs=203.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+++||||++|||++++++|+++|++|+++.|+.. ..+.+.+.   .+.++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            37899999999999999999999999999988877543 23333332   356788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++|||||....  .++.+.+.+++++++++|+.+++.+++++++.|..  .++||++||.++..+.+++..|+.+|+
T Consensus        83 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (245)
T PRK12937         83 RIDVLVNNAGVMPL--GTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKA  158 (245)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHH
Confidence            99999999998653  46677889999999999999999999999999853  579999999988888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.||++++|+||++.|++..... .+.....+... .+ .++..+++|+++.+.|++++...+++|
T Consensus       159 a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~-~~-~~~~~~~~d~a~~~~~l~~~~~~~~~g  235 (245)
T PRK12937        159 AVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGL-AP-LERLGTPEEIAAAVAFLAGPDGAWVNG  235 (245)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhc-CC-CCCCCCHHHHHHHHHHHcCccccCccc
Confidence            9999999999999999999999999999999864332 23333333333 22 367889999999999999988889999


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      +.+.+|||.
T Consensus       236 ~~~~~~~g~  244 (245)
T PRK12937        236 QVLRVNGGF  244 (245)
T ss_pred             cEEEeCCCC
Confidence            999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=5.1e-37  Score=264.64  Aligned_cols=239  Identities=31%  Similarity=0.496  Sum_probs=201.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||++|||.+++++|+++|++|+++.+ +++..++..+.+   +.++.++.+|++|++++.++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999987654 344444443333   34688999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  ..+.+.+.+++++++++|+.+++.+++.+++.|.+++.+++|++||..+..+.+++..|++||+
T Consensus        84 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK12935         84 KVDILVNNAGITRD--RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA  161 (247)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHH
Confidence            99999999998654  4566778899999999999999999999999997766789999999988888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.||++++++||++.|++....  ............ + .+.+.+++|++++++++++. ..+++|
T Consensus       162 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~-~-~~~~~~~edva~~~~~~~~~-~~~~~g  236 (247)
T PRK12935        162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PEEVRQKIVAKI-P-KKRFGQADEIAKGVVYLCRD-GAYITG  236 (247)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cHHHHHHHHHhC-C-CCCCcCHHHHHHHHHHHcCc-ccCccC
Confidence            999999999999988999999999999999876532  222222332322 2 26789999999999999975 357899


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+++|||+.
T Consensus       237 ~~~~i~~g~~  246 (247)
T PRK12935        237 QQLNINGGLY  246 (247)
T ss_pred             CEEEeCCCcc
Confidence            9999999963

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.4e-37  Score=274.95  Aligned_cols=235  Identities=30%  Similarity=0.427  Sum_probs=196.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||++|||++++++|+++|++|++.+++. ...+...+++   +.++.++.+|++|+++++++++++.+ ++
T Consensus        10 l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g   88 (306)
T PRK07792         10 LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LG   88 (306)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hC
Confidence            5799999999999999999999999999999998754 3344443333   45788999999999999999999998 99


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-------CCCEEEEEcCcccccCCCCCh
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-------HKGCILFTASACTEIAGIGSP  149 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~~sS~~~~~~~~~~~  149 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++++.++|.++       ..|+||++||.++..+.++..
T Consensus        89 ~iD~li~nAG~~~~--~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  166 (306)
T PRK07792         89 GLDIVVNNAGITRD--RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQA  166 (306)
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCc
Confidence            99999999998754  456778899999999999999999999999988643       137999999999888888889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .|++||++++.+++.++.|+.++||+||+|+|| +.|++....... +..   ....     ....+|++++.++.||++
T Consensus       167 ~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~---~~~~-----~~~~~pe~va~~v~~L~s  237 (306)
T PRK07792        167 NYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDV---EAGG-----IDPLSPEHVVPLVQFLAS  237 (306)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchh---hhhc-----cCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999 477765332111 110   0011     224589999999999999


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +...+++|+++.+|||...
T Consensus       238 ~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        238 PAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             ccccCCCCCEEEEcCCeEE
Confidence            8888999999999999765

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=3.3e-37  Score=264.55  Aligned_cols=233  Identities=24%  Similarity=0.326  Sum_probs=198.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++||||++|||.+++++|+++|++|++++|+. +..+...+.+   +.++.++.+|++|++++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999988754 3444444333   4578999999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH-HhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA-RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      |||||....  .++.+.+.++|+.++++|+.++++++++++ |.+.+++.++||++||.++..+.+++..|++||++++.
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~  158 (239)
T TIGR01831        81 VLNAGITRD--AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIG  158 (239)
T ss_pred             EECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHH
Confidence            999998754  356677899999999999999999999875 55554567899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|+.++||++++|+||++.|++....   .+........  .+.+++.+++|++++++||+++...+++|+.+.
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  233 (239)
T TIGR01831       159 ATKALAVELAKRKITVNCIAPGLIDTEMLAEV---EHDLDEALKT--VPMNRMGQPAEVASLAGFLMSDGASYVTRQVIS  233 (239)
T ss_pred             HHHHHHHHHhHhCeEEEEEEEccCccccchhh---hHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCchhcCccCCEEE
Confidence            99999999999999999999999999987543   2222223322  234789999999999999999989999999999


Q ss_pred             eCCCc
Q 044670          241 VDGGF  245 (302)
Q Consensus       241 ~~gG~  245 (302)
                      +|||+
T Consensus       234 ~~gg~  238 (239)
T TIGR01831       234 VNGGM  238 (239)
T ss_pred             ecCCc
Confidence            99995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=3.5e-37  Score=268.92  Aligned_cols=238  Identities=24%  Similarity=0.328  Sum_probs=190.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHh----CCCeEEEEecCCCHHHH----HHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKL----GEDVCYIHCDVTSEDEI----TNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v----~~~~~~~~~~   74 (302)
                      ++++||||++|||++++++|+++|++|++++|+ ++..+.+.+.+    +.+..++.+|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            689999999999999999999999999998654 45555554444    24567789999999866    4555666677


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCH-----------HHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPK-----------SDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~s  137 (302)
                      ++++|+||||||....  .++.+.+.           ++|.+++++|+.+++.+++++.+.|...      ..++|++++
T Consensus        82 ~g~iD~lv~nAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP--TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCC--CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            8999999999997643  23333222           3588999999999999999999998542      246899999


Q ss_pred             CcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHH
Q 044670          138 SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAE  217 (302)
Q Consensus       138 S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (302)
                      |..+..+.+++.+|++||++++++++.++.|+.++||+|++|+||++.++...    .....+.+... .+..++..+|+
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~  234 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRK-VPLGQREASAE  234 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc----chhHHHHHHHh-CCCCcCCCCHH
Confidence            99888888899999999999999999999999999999999999999877332    12222222222 23324678999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      |+++++++++++...+++|+.+.+|||+.+.
T Consensus       235 ~va~~~~~l~~~~~~~~~G~~~~v~gg~~~~  265 (267)
T TIGR02685       235 QIADVVIFLVSPKAKYITGTCIKVDGGLSLT  265 (267)
T ss_pred             HHHHHHHHHhCcccCCcccceEEECCceecc
Confidence            9999999999988889999999999998654

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-37  Score=270.03  Aligned_cols=233  Identities=27%  Similarity=0.324  Sum_probs=197.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-------HHHHHHH---hCCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-------GQALACK---LGEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.+.       .++..+.   .+.++.++.+|+++++++.+++++
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999997642       2222222   245788999999999999999999


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--CCC
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--IGS  148 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--~~~  148 (302)
                      +.+.++++|+||||||....  .+..+.+.++|++++++|+.+++++++++++.|.+++.++|+++||..+..+.  +++
T Consensus        84 ~~~~~g~id~li~~ag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  161 (273)
T PRK08278         84 AVERFGGIDICVNNASAINL--TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPH  161 (273)
T ss_pred             HHHHhCCCCEEEECCCCcCC--CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCc
Confidence            99999999999999997654  46777889999999999999999999999999987777899999998877766  788


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCC-cccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY-GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ..|++||++++.+++.++.|+.++||+||+|+|| ++.|++.......           ..+.++..+|+++|+++++++
T Consensus       162 ~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~-----------~~~~~~~~~p~~va~~~~~l~  230 (273)
T PRK08278        162 TAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGG-----------DEAMRRSRTPEIMADAAYEIL  230 (273)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccc-----------cccccccCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999 5777754332110           011255789999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++...+++|+.+ +|++...
T Consensus       231 ~~~~~~~~G~~~-~~~~~~~  249 (273)
T PRK08278        231 SRPAREFTGNFL-IDEEVLR  249 (273)
T ss_pred             cCccccceeEEE-eccchhh
Confidence            988889999877 6777654

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=6e-37  Score=264.65  Aligned_cols=237  Identities=30%  Similarity=0.405  Sum_probs=201.3

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKLG-----EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||||++|||+++++.|+++|++|++++|+ .+..+.+.+.+.     .....+.+|++|+++++++++++.++++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 555555554432     2345688999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++|||||....  .++.+.+.+++++++++|+.+++.+++.+++.|.+++.++||++||.++..+.+++..|+++|++++
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~  159 (251)
T PRK07069         82 VLVNNAGVGSF--GAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVA  159 (251)
T ss_pred             EEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence            99999998654  4677788999999999999999999999999998777889999999999888899999999999999


Q ss_pred             HHHHHHHHHHCCCC--cEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          160 ALVKILAAELRQYG--LRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       160 ~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      .++++++.|+.+++  |+|++|+||++.|++.....   ..++....+....  +.+++.+|+|+++++++++++...++
T Consensus       160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~va~~~~~l~~~~~~~~  237 (251)
T PRK07069        160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV--PLGRLGEPDDVAHAVLYLASDESRFV  237 (251)
T ss_pred             HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccC--CCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999997765  99999999999999875321   1122222222222  23678899999999999999888899


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|+.+.+|||..
T Consensus       238 ~g~~i~~~~g~~  249 (251)
T PRK07069        238 TGAELVIDGGIC  249 (251)
T ss_pred             cCCEEEECCCee
Confidence            999999999965

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.7e-37  Score=262.61  Aligned_cols=238  Identities=25%  Similarity=0.387  Sum_probs=203.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+++||||+++||++++++|+++|++|++++|+... .......   .+.++.++.+|++|+++++++++++.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999998542 2222222   235688999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++|||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+.+.++||++||..+..+.++...|+.||++++
T Consensus        83 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         83 ILVNNAGITRD--SVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            99999998654  4667788999999999999999999999999998777889999999999888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.++.+.||++++++||++.|++....  .+.....+...  .+.+.+.+++|+++++.+++++...+++|+.+
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQ--IPMKRLGTPEEIAAAVAFLVSEAAGFITGETI  236 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCccccCccCcEE
Confidence            999999999998999999999999999986543  23333333332  22367889999999999999887888999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+.+
T Consensus       237 ~~~~g~~~  244 (245)
T PRK12824        237 SINGGLYM  244 (245)
T ss_pred             EECCCeec
Confidence            99999754

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=262.57  Aligned_cols=242  Identities=27%  Similarity=0.421  Sum_probs=203.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||+||||++++++|+++|++|++++|+++..+.+.+.+   +.++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999877665554443   346778899999999999999999999999


Q ss_pred             ccEEEEcccCCCC-CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+... ...++.+.+.+++++++++|+.+++++++++++.+.+.+.++||++||.++..   +...|++||+
T Consensus        84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~  160 (250)
T PRK07774         84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKV  160 (250)
T ss_pred             CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHH
Confidence            9999999998642 12356677889999999999999999999999999777788999999987754   4578999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++++++++...||++++++||.+.|++..... ............+  ...+.+++|+++++++++++...+.+|
T Consensus       161 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~d~a~~~~~~~~~~~~~~~g  237 (250)
T PRK07774        161 GLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIP--LSRMGTPEDLVGMCLFLLSDEASWITG  237 (250)
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCC--CCCCcCHHHHHHHHHHHhChhhhCcCC
Confidence            9999999999999988999999999999999876432 2333333443332  255789999999999999876667799


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +++++++|..+.
T Consensus       238 ~~~~v~~g~~~~  249 (250)
T PRK07774        238 QIFNVDGGQIIR  249 (250)
T ss_pred             CEEEECCCeecc
Confidence            999999997653

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=262.11  Aligned_cols=238  Identities=32%  Similarity=0.454  Sum_probs=197.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +|++|||||++|||.+++++|+++|++|+++.++ ++........+   +.++.++.+|++|.+++.++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5799999999999999999999999999887644 34444443332   4567889999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCC-ChhHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIG-SPAYTVS  154 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~-~~~Y~~s  154 (302)
                      |+||||||..... .++.+.+.++|++++++|+.+++++++++++.|.++.   .++||++||.++..+.++ +..|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999986431 3566778999999999999999999999999986542   478999999988877776 3679999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.++.++||++++|+||++.|++..... .+..........  +.++..+++|+++++++++++...++
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d~a~~~~~l~~~~~~~~  237 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGI--PMGRGGTAEEVARAILWLLSDEASYT  237 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999999764322 233333333222  23667899999999999999877889


Q ss_pred             cccEEeeCCC
Q 044670          235 TGLNLVVDGG  244 (302)
Q Consensus       235 ~G~~~~~~gG  244 (302)
                      +|+.+.+|||
T Consensus       238 ~g~~~~~~gg  247 (248)
T PRK06123        238 TGTFIDVSGG  247 (248)
T ss_pred             cCCEEeecCC
Confidence            9999999997

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-37  Score=261.41  Aligned_cols=215  Identities=22%  Similarity=0.202  Sum_probs=180.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +++||||++|||++++++|+++|++|++++|+.++.++..+.+  .+.++.+|++|+++++++++++.+   ++|++|||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~~   76 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL--DVDAIVCDNTDPASLEEARGLFPH---HLDTIVNV   76 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEEC
Confidence            5899999999999999999999999999999988777665554  356789999999999998887643   69999999


Q ss_pred             ccCCCCC----CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           85 AGIVDRG----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        85 Ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||.....    ..++.+ +.++|++++++|+.++++++++++|.|.+  .|+||++||.+    .+++..|++||+|+++
T Consensus        77 ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asKaal~~  149 (223)
T PRK05884         77 PAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIKAALSN  149 (223)
T ss_pred             CCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHHHHHHH
Confidence            9853210    012333 46899999999999999999999999964  58999999976    3456889999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |++.++.|+.++||+||+|+||++.|++....           .. .+    ..+|+|+++++.||+++...+++|+++.
T Consensus       150 ~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~-~p----~~~~~~ia~~~~~l~s~~~~~v~G~~i~  213 (223)
T PRK05884        150 WTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SR-TP----PPVAAEIARLALFLTTPAARHITGQTLH  213 (223)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cC-CC----CCCHHHHHHHHHHHcCchhhccCCcEEE
Confidence            99999999999999999999999998864211           11 11    2389999999999999989999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||...
T Consensus       214 vdgg~~~  220 (223)
T PRK05884        214 VSHGALA  220 (223)
T ss_pred             eCCCeec
Confidence            9999764

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=261.44  Aligned_cols=239  Identities=31%  Similarity=0.413  Sum_probs=197.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|+++||||++|||.++++.|+++|++|+++. |+++..+...+.+   +.++.++.+|++|+++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999998765 5555544443333   4578899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCC-ChhHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIG-SPAYTVS  154 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~-~~~Y~~s  154 (302)
                      |++|||||..... .++.+.+.++++.++++|+.+++.+++.+++.+..++   .++||++||.++..+.+. +..|++|
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06947         82 DALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGS  160 (248)
T ss_pred             CEEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhh
Confidence            9999999976431 3566788999999999999999999999999886543   578999999888777664 5689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+++++++++++.++.++||+|++|+||+++|++..... .++..... .... +.++..+++|+++.++++++++..++
T Consensus       161 K~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~-~~~~~~~~-~~~~-~~~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        161 KGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGG-QPGRAARL-GAQT-PLGRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccC-CHHHHHHH-hhcC-CCCCCcCHHHHHHHHHHHcCccccCc
Confidence            999999999999999999999999999999999865322 22222222 1222 23668899999999999999888899


Q ss_pred             cccEEeeCCCc
Q 044670          235 TGLNLVVDGGF  245 (302)
Q Consensus       235 ~G~~~~~~gG~  245 (302)
                      +|+++.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-37  Score=274.06  Aligned_cols=221  Identities=27%  Similarity=0.325  Sum_probs=191.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++||||||+|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus         5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (330)
T PRK06139          5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR   84 (330)
T ss_pred             CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999988877665544   467888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||+...  .++.+.+.+++++++++|+.+++++++.++|+|.+++.++||++||..+..+.++...|++||++
T Consensus        85 iD~lVnnAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaa  162 (330)
T PRK06139         85 IDVWVNNVGVGAV--GRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFG  162 (330)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHH
Confidence            9999999998654  57788899999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCC-CcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          158 IIALVKILAAELRQY-GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       158 ~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +.+|+++++.|+.++ ||+|++|+||+++||+.......       ......+.....+|+++|+++++++..+
T Consensus       163 l~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------~~~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        163 LRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-------TGRRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-------ccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            999999999999875 89999999999999987542110       0011111134779999999999998643

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.7e-36  Score=262.62  Aligned_cols=242  Identities=28%  Similarity=0.397  Sum_probs=202.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|+++||||+||||++++++|+++|++|++++|+.. ......+.+   +.++.++.+|++|++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999999999999998643 333333332   3568899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC------CCEEEEEcCcccccCCCCChhHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH------KGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      |++|||||.......++.+.+.+++++++++|+.+++++++++.+.|.++.      .++||++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            999999998654334667788899999999999999999999999987543      46799999999988888899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      .||++++.+++.++.|+.++||++++|+||++.|++....  .+.. .........+.+++.+++|+++++.+++++...
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~  238 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV--TAKY-DALIAKGLVPMPRWGEPEDVARAVAALASGDLP  238 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc--chhH-HhhhhhcCCCcCCCcCHHHHHHHHHHHhCCccc
Confidence            9999999999999999998999999999999999876543  1222 222222122346788999999999999988777


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.+.+|||...
T Consensus       239 ~~~G~~~~i~gg~~~  253 (256)
T PRK12745        239 YSTGQAIHVDGGLSI  253 (256)
T ss_pred             ccCCCEEEECCCeec
Confidence            899999999999764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-38  Score=274.63  Aligned_cols=260  Identities=23%  Similarity=0.265  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|++++||||++|||+++|++|+.+|++|++++|+.++.++..+.+     +..+.++.+|++|.++|+++++++.+.+
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            46899999999999999999999999999999999998887776665     3568889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------  144 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------  144 (302)
                      +++|++|||||++..   +. ..+.|++|..|++|++|+|.+++.++|.|+.+..+|||++||..+...           
T Consensus       113 ~~ldvLInNAGV~~~---~~-~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~  188 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAP---PF-SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKA  188 (314)
T ss_pred             CCccEEEeCcccccC---Cc-ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhc
Confidence            999999999999875   33 678899999999999999999999999999877799999999886110           


Q ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          145 --GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                        .....+|+.||.++..+++.|++++.. ||.+++++||.|.|+...+   .......+......+  .+.++++.|++
T Consensus       189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r---~~~~~~~l~~~l~~~--~~ks~~~ga~t  262 (314)
T KOG1208|consen  189 KLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR---VNLLLRLLAKKLSWP--LTKSPEQGAAT  262 (314)
T ss_pred             cCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec---chHHHHHHHHHHHHH--hccCHHHHhhh
Confidence              112335999999999999999999988 9999999999999996555   223333333333322  13589999999


Q ss_pred             HHHhccCC-CCCccccEEeeCCCcccCCCCccccCCCccceeeccCCccccchh
Q 044670          223 ALYLATDE-ASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       223 ~~~l~s~~-~~~~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  275 (302)
                      .++++..+ -...+|.+ .-|+...    ...+.+.+...++++|+.+.++.+.
T Consensus       263 ~~~~a~~p~~~~~sg~y-~~d~~~~----~~~~~a~d~~~~~~lw~~s~~l~~~  311 (314)
T KOG1208|consen  263 TCYAALSPELEGVSGKY-FEDCAIA----EPSEEALDEELAEKLWKFSEELIDE  311 (314)
T ss_pred             eehhccCccccCccccc-ccccccc----ccccccCCHHHHHHHHHHHHHHhhh
Confidence            99998644 33445544 2222211    1245677888899999998887764

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=275.52  Aligned_cols=265  Identities=22%  Similarity=0.226  Sum_probs=208.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++||+++||||++|||++++++|+++|++|++++|+.+..+...+.+     +.++.++.+|++|.++++++++++.+++
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            47899999999999999999999999999999999877665543333     2467889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------  143 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------  143 (302)
                      +++|+||||||....    ....+.++++..|++|+.|++.+++.+++.|.+.+.++||++||.++..            
T Consensus        94 ~~iD~li~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~  169 (306)
T PRK06197         94 PRIDLLINNAGVMYT----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWE  169 (306)
T ss_pred             CCCCEEEECCccccC----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcc
Confidence            999999999997642    2345677899999999999999999999999877778999999987543            


Q ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEE--eCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHH
Q 044670          144 -AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV--SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA  220 (302)
Q Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v--~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (302)
                       +.++...|+.||++++++++.++++++++|++++++  +||+|.|++.....   .....+.....+.  ...++++.+
T Consensus       170 ~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~---~~~~~~~~~~~~~--~~~~~~~g~  244 (306)
T PRK06197        170 RRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLP---RALRPVATVLAPL--LAQSPEMGA  244 (306)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCc---HHHHHHHHHHHhh--hcCCHHHHH
Confidence             223567899999999999999999998888877665  69999999876532   1222222222221  135788888


Q ss_pred             HHHHHhccCCCCCccccEEeeCCCcccCCC----CccccCCCccceeeccCCccccchh
Q 044670          221 NAALYLATDEASDVTGLNLVVDGGFSVANP----SLMKFASPFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       221 ~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~  275 (302)
                      ...++++..+ ...+|..+..||+......    ..++.+.+...++++|+.+.+++|+
T Consensus       245 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  302 (306)
T PRK06197        245 LPTLRAATDP-AVRGGQYYGPDGFGEQRGYPKVVASSAQSHDEDLQRRLWAVSEELTGV  302 (306)
T ss_pred             HHHHHHhcCC-CcCCCeEEccCcccccCCCCccCCCccccCCHHHHHHHHHHHHHHHCC
Confidence            8888887643 3457888887776543221    2345566788999999999998875

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.2e-37  Score=266.21  Aligned_cols=234  Identities=18%  Similarity=0.233  Sum_probs=190.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHH----cCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHE----NGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~----~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++||||++|||++++++|++    +|++|++++|+.+..+++.+++     +.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999988777766554     2357889999999999999999998877


Q ss_pred             CCc----cEEEEcccCCCCCCCCCCC-CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccCCCCC
Q 044670           76 GKL----DIMYNNAGIVDRGFASVLD-TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAGIGS  148 (302)
Q Consensus        76 ~~i----d~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~~~~~  148 (302)
                      +.+    |+||||||..........+ .+.++|++++++|+.+++.+++.++|.|.+++  .++||++||.++..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    6999999975421112222 34789999999999999999999999997642  4799999999999888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHHHHH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      ..|++||++++.+++.++.|++++||+||+|+||+|.|++.....   ..++....+... . +.+++.+|+|+|+++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~p~eva~~~~~  239 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQEL-K-AKGKLVDPKVSAQKLLS  239 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHH-H-hcCCCCCHHHHHHHHHH
Confidence            999999999999999999999999999999999999999864311   112222222222 2 23778999999999999


Q ss_pred             hccCCCCCccccEEee
Q 044670          226 LATDEASDVTGLNLVV  241 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~  241 (302)
                      +++ ..++++|+.+.+
T Consensus       240 l~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       240 LLE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHh-cCCcCCcceeec
Confidence            996 467899998753

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=2.8e-36  Score=258.98  Aligned_cols=237  Identities=26%  Similarity=0.367  Sum_probs=203.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |++|||||++|||++++++|+++|++|+++.| +++..+......   +.++.++.+|++|+++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            78999999999999999999999999999888 444444433322   35788999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.+++..|+.+|++++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~  158 (242)
T TIGR01829        81 VLVNNAGITRD--ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMI  158 (242)
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            99999997654  4567788899999999999999999999999998777789999999988888888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.++.+.||++++++||++.|++....  .+.....+... . +..++.+|+|+++++.++++++..+++|+.+
T Consensus       159 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~  234 (242)
T TIGR01829       159 GFTKALAQEGATKGVTVNTISPGYIATDMVMAM--REDVLNSIVAQ-I-PVGRLGRPEEIAAAVAFLASEEAGYITGATL  234 (242)
T ss_pred             HHHHHHHHHhhhhCeEEEEEeeCCCcCcccccc--chHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            999999999998999999999999999986543  23333333332 2 2367889999999999999887888999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||..
T Consensus       235 ~~~gg~~  241 (242)
T TIGR01829       235 SINGGLY  241 (242)
T ss_pred             EecCCcc
Confidence            9999964

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=260.87  Aligned_cols=237  Identities=32%  Similarity=0.457  Sum_probs=200.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||+++||+++++.|+++|++|++++|+.+..+++.+..+  ..++.+|+++++++.++++.    .+++|+
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~----~~~~d~   80 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG--CEPLRLDVGDDAAIRAALAA----AGAFDG   80 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeEEEecCCCHHHHHHHHHH----hCCCCE
Confidence            478999999999999999999999999999999999877766655443  56788999999988777664    468999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +|||||....  .+..+.+.+++++++++|+.+++.+++++.+.+.+++ .++||++||..+..+.+++..|+.||++++
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~  158 (245)
T PRK07060         81 LVNCAGIASL--ESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALD  158 (245)
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHH
Confidence            9999998653  4566678899999999999999999999999986554 489999999998888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.++.+.||++++++||++.|++.......+.....+...  .+.+++.+++|++++++++++++...++|+.+
T Consensus       159 ~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~  236 (245)
T PRK07060        159 AITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA--IPLGRFAEVDDVAAPILFLLSDAASMVSGVSL  236 (245)
T ss_pred             HHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCcccCCccCcEE
Confidence            9999999999888999999999999999865433333333333322  23377999999999999999988889999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       237 ~~~~g~~~  244 (245)
T PRK07060        237 PVDGGYTA  244 (245)
T ss_pred             eECCCccC
Confidence            99999753

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=259.07  Aligned_cols=217  Identities=17%  Similarity=0.180  Sum_probs=184.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC-
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG-   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   76 (302)
                      ++||+++||||++|||++++++|+++|++|++++|++++.+++.+.+   +.++..+.+|++|+++++++++++.++++ 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988877665544   45678889999999999999999999998 


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|++|||||.... ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+.   +++..|++||
T Consensus        83 ~iD~li~nag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asK  158 (227)
T PRK08862         83 APDVLVNNWTSSPL-PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSN  158 (227)
T ss_pred             CCCEEEECCccCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHH
Confidence            99999999986432 14677888999999999999999999999999997654 6899999997543   5678899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++++|+++++.|++++||+||+|+||++.|+...    .++.++..             .+|++.++.||++  +.++|
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~----~~~~~~~~-------------~~~~~~~~~~l~~--~~~~t  219 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL----DAVHWAEI-------------QDELIRNTEYIVA--NEYFS  219 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc----CHHHHHHH-------------HHHHHhheeEEEe--ccccc
Confidence            99999999999999999999999999999998321    12211111             1799999999996  66899


Q ss_pred             ccEEe
Q 044670          236 GLNLV  240 (302)
Q Consensus       236 G~~~~  240 (302)
                      |+.+.
T Consensus       220 g~~~~  224 (227)
T PRK08862        220 GRVVE  224 (227)
T ss_pred             ceEEe
Confidence            98774

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-36  Score=259.23  Aligned_cols=228  Identities=18%  Similarity=0.226  Sum_probs=195.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCC--HHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTS--EDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~--~~~v~~~~~~~~~~   74 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+.+..+...+++    +..+.++.+|+++  .+++.++++++.+.
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999988776665544    2356788999986  67899999999888


Q ss_pred             c-CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           75 Y-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        75 ~-~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      + +++|++|||||.... ..++.+.+.++|++.+++|+.+++++++++++.|.+.+.+++|++||..+..+.+++..|++
T Consensus        84 ~~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~  162 (239)
T PRK08703         84 TQGKLDGIVHCAGYFYA-LSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGA  162 (239)
T ss_pred             hCCCCCEEEEecccccc-CCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHH
Confidence            8 789999999997532 24677888999999999999999999999999998777789999999999888888899999


Q ss_pred             HHHHHHHHHHHHHHHHCCC-CcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          154 SKYGIIALVKILAAELRQY-GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      ||++++.+++.++.|+.++ +|+|++|+||+|+||+........ .         .  ....+++|++..++|++++.+.
T Consensus       163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~---------~--~~~~~~~~~~~~~~~~~~~~~~  230 (239)
T PRK08703        163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGE-A---------K--SERKSYGDVLPAFVWWASAESK  230 (239)
T ss_pred             hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCC-C---------c--cccCCHHHHHHHHHHHhCcccc
Confidence            9999999999999999877 699999999999999865321110 0         0  2356999999999999999999


Q ss_pred             CccccEEee
Q 044670          233 DVTGLNLVV  241 (302)
Q Consensus       233 ~~~G~~~~~  241 (302)
                      ++||+++.+
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999864

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-36  Score=259.74  Aligned_cols=245  Identities=29%  Similarity=0.464  Sum_probs=206.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+.+.+.+. .+++++.+|++|++++..+++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999999887776665543 467889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||+|....  .+..+.+.++|++.+++|+.+++.+++++.+.+.+++.++||++||..+... .+...|+.||++++.+
T Consensus        82 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~  158 (257)
T PRK07074         82 VANAGAARA--ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY  158 (257)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence            999998654  3566778899999999999999999999999998777789999999766543 4567899999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      ++.++.++.++||+|++++||+++|++..... ..+.+.......  .+.+++.+++|+++++++++++...+++|+.+.
T Consensus       159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~  236 (257)
T PRK07074        159 TKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW--YPLQDFATPDDVANAVLFLASPAARAITGVCLP  236 (257)
T ss_pred             HHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEE
Confidence            99999999999999999999999999754321 123333322222  233779999999999999999877889999999


Q ss_pred             eCCCcccCCCCc
Q 044670          241 VDGGFSVANPSL  252 (302)
Q Consensus       241 ~~gG~~~~~~~~  252 (302)
                      +|||+.....+.
T Consensus       237 ~~~g~~~~~~~~  248 (257)
T PRK07074        237 VDGGLTAGNREM  248 (257)
T ss_pred             eCCCcCcCChhh
Confidence            999987655443

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-36  Score=258.88  Aligned_cols=240  Identities=29%  Similarity=0.431  Sum_probs=201.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   75 (302)
                      |++|+++||||+||||++++++|+++|++|++. .|+.+..+...+.+   +.++.++.+|++|++++.++++++.+++ 
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999775 67766555544433   3568889999999999999999998876 


Q ss_pred             -----CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChh
Q 044670           76 -----GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA  150 (302)
Q Consensus        76 -----~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~  150 (302)
                           +++|++|||||....  .++.+.+.+.|++++++|+.+++++++.+++.|.+  .+++|++||..+..+.+++..
T Consensus        84 ~~~~~~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~  159 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQ--GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIA  159 (254)
T ss_pred             cccCCCCccEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcc
Confidence                 479999999997654  46677889999999999999999999999999854  479999999988888889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |+.||++++.+++.++.++.++|+++++++||+++|++.......+.. ..+..... ..++..+++|+++++.+++++.
T Consensus       160 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~dva~~~~~l~~~~  237 (254)
T PRK12746        160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEI-RNFATNSS-VFGRIGQVEDIADAVAFLASSD  237 (254)
T ss_pred             hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhH-HHHHHhcC-CcCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999987543322322 22222222 2367889999999999999877


Q ss_pred             CCCccccEEeeCCCcc
Q 044670          231 ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~  246 (302)
                      ..+++|+.++++||+.
T Consensus       238 ~~~~~g~~~~i~~~~~  253 (254)
T PRK12746        238 SRWVTGQIIDVSGGFC  253 (254)
T ss_pred             cCCcCCCEEEeCCCcc
Confidence            7788999999999854

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=266.43  Aligned_cols=225  Identities=29%  Similarity=0.444  Sum_probs=189.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|++++.++++++.+.+++
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987776665554   346788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++ .|+||++||.++..+.++...|++||+
T Consensus        84 id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  161 (275)
T PRK05876         84 VDVVFSNAGIVVG--GPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKY  161 (275)
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHH
Confidence            9999999998654  5778889999999999999999999999999997665 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHH--HHH----HHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA--ILE----AFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~----~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ++++|++.++.|+.++||+|++|+||++.|++.........  ...    ...... +..+.+++|+|+|+.++..+.
T Consensus       162 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~ai~  238 (275)
T PRK05876        162 GVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPL-PLQDDNLGVDDIAQLTADAIL  238 (275)
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccc-cccccCCCHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997654211000  000    000000 111447899999999987774

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=256.39  Aligned_cols=232  Identities=21%  Similarity=0.264  Sum_probs=195.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |.+|+++||||+++||++++++|+++|++|++++|+.+..      .  ...++.+|++|+++++++++++.+.+ ++|+
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d~   71 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F--PGELFACDLADIEQTAATLAQINEIH-PVDA   71 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c--CceEEEeeCCCHHHHHHHHHHHHHhC-CCcE
Confidence            5789999999999999999999999999999999987541      1  12578999999999999999998876 5899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.++||++||.+. .+.++...|++||++++.
T Consensus        72 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~-~~~~~~~~Y~~sK~a~~~  148 (234)
T PRK07577         72 IVNNVGIALP--QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAI-FGALDRTSYSAAKSALVG  148 (234)
T ss_pred             EEECCCCCCC--CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccccc-cCCCCchHHHHHHHHHHH
Confidence            9999998654  4666778999999999999999999999999998777889999999853 466778899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +++.++.|+.++||++++|+||++.|++....... +......... .+ .++..+++|+|+++++++++...+++|+.+
T Consensus       149 ~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~  226 (234)
T PRK07577        149 CTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS-IP-MRRLGTPEEVAAAIAFLLSDDAGFITGQVL  226 (234)
T ss_pred             HHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc-CC-CCCCcCHHHHHHHHHHHhCcccCCccceEE
Confidence            99999999999999999999999999986543221 1211222222 22 366789999999999999887788999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||..
T Consensus       227 ~~~g~~~  233 (234)
T PRK07577        227 GVDGGGS  233 (234)
T ss_pred             EecCCcc
Confidence            9999854

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3.9e-36  Score=259.23  Aligned_cols=222  Identities=21%  Similarity=0.217  Sum_probs=188.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+++||||++|||++++++|+ +|++|++++|+.++.+++.+++   + ..+.++.+|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            589999999999999999999 5999999999988887766554   2 2478899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .+..+.+.+.+.+++++|+.+++.+++.++|.|.+++ .|+||++||.++..+.+++..|++||+|+
T Consensus        80 ~lv~nag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILGD--QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCCC--chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            99999998653  2444566778889999999999999999999997654 68999999999998888999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      ++|++.++.|+.++||+||+|+||++.|++......             .  +...+|+|+|+.++++++....   ++.
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-------------~--~~~~~pe~~a~~~~~~~~~~~~---~~~  219 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-------------A--PMSVYPRDVAAAVVSAITSSKR---STT  219 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-------------C--CCCCCHHHHHHHHHHHHhcCCC---Cce
Confidence            999999999999999999999999999987543210             0  1135899999999999976432   455


Q ss_pred             EeeCCCcc
Q 044670          239 LVVDGGFS  246 (302)
Q Consensus       239 ~~~~gG~~  246 (302)
                      +.++++..
T Consensus       220 ~~~~~~~~  227 (246)
T PRK05599        220 LWIPGRLR  227 (246)
T ss_pred             EEeCccHH
Confidence            66776643

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-36  Score=259.90  Aligned_cols=241  Identities=30%  Similarity=0.426  Sum_probs=204.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||+++||++++++|+++|++ |++++|+.+......+.+   +.++.++.+|+++++++.++++.+.++++
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999 999999876655444333   45678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|++|||||....  .++.+.+.+++++++++|+.+++++++.+++.|.+++ .+++|++||..+..+.++...|+.+|
T Consensus        84 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK  161 (260)
T PRK06198         84 RLDALVNAAGLTDR--GTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASK  161 (260)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHH
Confidence            99999999997654  4566788999999999999999999999999996653 58999999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++.+++.++.|+.+.||++++|+||++.|++.....     ....+..... . ..+.+++.+++|+++++++++++.
T Consensus       162 ~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~a~~~~~l~~~~  239 (260)
T PRK06198        162 GALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA-A-TQPFGRLLDPDEVARAVAFLLSDE  239 (260)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh-c-cCCccCCcCHHHHHHHHHHHcChh
Confidence            99999999999999999999999999999998743210     1122222221 1 223467899999999999999988


Q ss_pred             CCCccccEEeeCCCc
Q 044670          231 ASDVTGLNLVVDGGF  245 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~  245 (302)
                      ..+++|+.+.+|||.
T Consensus       240 ~~~~~G~~~~~~~~~  254 (260)
T PRK06198        240 SGLMTGSVIDFDQSV  254 (260)
T ss_pred             hCCccCceEeECCcc
Confidence            889999999999984

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-36  Score=261.19  Aligned_cols=238  Identities=25%  Similarity=0.283  Sum_probs=199.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |.+|+++||||+||||++++++|+++|++|++++|+.+..+.+.+..+..+.++.+|++|+++++++++++.+.++++|+
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDI   80 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999988777766666667888999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .++.+.+.+++++++++|+.+++++++.+++.|++++.++||++||.++..+.++...|+.||++++.
T Consensus        81 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (275)
T PRK08263         81 VVNNAGYGLF--GMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEG  158 (275)
T ss_pred             EEECCCCccc--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHH
Confidence            9999998754  57778899999999999999999999999999987778899999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---C----HHHHHHHHHhccccCCCC-CCHHHHHHHHHHhccCCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---N----PAILEAFLSEMGNLRGQV-LNAEGIANAALYLATDEAS  232 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~----~~~~~~~~~~~~~~~~~~-~~~~dva~~~~~l~s~~~~  232 (302)
                      +++.++.++.++||++++++||++.|++......   .    ...........  ..+++ .+|+|++++++++++.+..
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~~~~~~  236 (275)
T PRK08263        159 MSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQW--SERSVDGDPEAAAEALLKLVDAENP  236 (275)
T ss_pred             HHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHH--HhccCCCCHHHHHHHHHHHHcCCCC
Confidence            9999999999999999999999999998742111   0    11111111111  12556 8999999999999975432


Q ss_pred             CccccEEeeCCC
Q 044670          233 DVTGLNLVVDGG  244 (302)
Q Consensus       233 ~~~G~~~~~~gG  244 (302)
                        .++++...+.
T Consensus       237 --~~~~~~~~~~  246 (275)
T PRK08263        237 --PLRLFLGSGV  246 (275)
T ss_pred             --CeEEEeCchH
Confidence              4565554443

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=256.27  Aligned_cols=238  Identities=26%  Similarity=0.327  Sum_probs=196.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|++|||||++|||++++++|+++|++|+++.++ .+..+.+.+.+   +.++.++.+|++|.+++.++++++.+.+++
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~   87 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP   87 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999887664 34444444333   456888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .+..+.+.+++++++++|+.+++++++++.+.+.+...++||+++|.....+.+++..|++||++
T Consensus        88 iD~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a  165 (258)
T PRK09134         88 ITLLVNNASLFEY--DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAA  165 (258)
T ss_pred             CCEEEECCcCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHH
Confidence            9999999997654  46677889999999999999999999999999977667899999998777777888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.++.+. |+|++|+||++.|+...    ...........  .+.++..+++|+|++++++++.  .+++|+
T Consensus       166 ~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~----~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~~~~~--~~~~g~  236 (258)
T PRK09134        166 LWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ----SPEDFARQHAA--TPLGRGSTPEEIAAAVRYLLDA--PSVTGQ  236 (258)
T ss_pred             HHHHHHHHHHHhcCC-cEEEEeecccccCCccc----ChHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhcC--CCcCCC
Confidence            999999999999875 99999999999886422    12222222222  2236678999999999999974  467999


Q ss_pred             EEeeCCCcccCCC
Q 044670          238 NLVVDGGFSVANP  250 (302)
Q Consensus       238 ~~~~~gG~~~~~~  250 (302)
                      .+.+|||..+.+.
T Consensus       237 ~~~i~gg~~~~~~  249 (258)
T PRK09134        237 MIAVDGGQHLAWL  249 (258)
T ss_pred             EEEECCCeecccc
Confidence            9999999765443

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=3e-36  Score=269.98  Aligned_cols=271  Identities=18%  Similarity=0.145  Sum_probs=204.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++||||++|||++++++|+++|++|++++|+.++.+++.+.+   +.++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            36899999999999999999999999999999999988777666555   246788999999999999999998887788


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC--CEEEEEcCccccc------------
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK--GCILFTASACTEI------------  143 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~~sS~~~~~------------  143 (302)
                      +|+||||||+.... .+..+.+.++++.++++|+.|++++++.++|.|.+++.  +|||++||.++..            
T Consensus        84 iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~  162 (322)
T PRK07453         84 LDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAP  162 (322)
T ss_pred             ccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCc
Confidence            99999999975421 12345688999999999999999999999999977643  6999999976432            


Q ss_pred             -----------------------CCCCChhHHHHHHHHHHHHHHHHHHHC-CCCcEEEEEeCCccc-CCcccCCCCCHHH
Q 044670          144 -----------------------AGIGSPAYTVSKYGIIALVKILAAELR-QYGLRVNCVSPYGLV-SGISSRNSINPAI  198 (302)
Q Consensus       144 -----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~-t~~~~~~~~~~~~  198 (302)
                                             +..++.+|+.||++.+.+++.+++++. .+||++++++||+|. |++.+........
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~  242 (322)
T PRK07453        163 ADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQK  242 (322)
T ss_pred             cchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHHH
Confidence                                   012346899999999999999999984 469999999999995 7765443211111


Q ss_pred             HHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc-c----CCCCccccCCCccceeeccCCccccc
Q 044670          199 LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS-V----ANPSLMKFASPFHLIKAIGDGCRSFL  273 (302)
Q Consensus       199 ~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (302)
                      +..++...  ....+.+++..++.+++++.++....+|.++. ++... .    .....++.+.+...++++|+++++++
T Consensus       243 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~-~~~~~~~~~~~~~~~~~~~a~d~~~~~~lw~~s~~~~  319 (322)
T PRK07453        243 LFPWFQKN--ITGGYVSQELAGERVAQVVADPEFAQSGVHWS-WGNRQKKDRKAFSQELSDRATDDDKARRLWDLSAKLV  319 (322)
T ss_pred             HHHHHHHH--HhhceecHHHHhhHHHHhhcCcccCCCCceee-cCCCCCcCccccccccchhhcCHHHHHHHHHHHHHHh
Confidence            11111111  11335688888888888876554445777665 22211 0    01134556778889999999999887


Q ss_pred             hh
Q 044670          274 GI  275 (302)
Q Consensus       274 g~  275 (302)
                      |+
T Consensus       320 ~~  321 (322)
T PRK07453        320 GL  321 (322)
T ss_pred             Cc
Confidence            63

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=7.7e-36  Score=261.22  Aligned_cols=223  Identities=26%  Similarity=0.303  Sum_probs=189.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||+||||++++++|+++|++|++++|+.++.+++..   ..+.++.+|++|+++++++++++.+.++++|+
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~   77 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS---LGVHPLSLDVTDEASIKAAVDTIIAEEGRIDV   77 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999999999999999999999999999877665543   35788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||.++..+.+....|++||++++.
T Consensus        78 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  155 (273)
T PRK06182         78 LVNNAGYGSY--GAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEG  155 (273)
T ss_pred             EEECCCcCCC--CchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHH
Confidence            9999998654  57778899999999999999999999999999988778899999999888877888899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------C-CHHHHHH---HHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------I-NPAILEA---FLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~-~~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +++.++.|+.++||++++|+||+++|++.....         . .......   .+... .+.+++.+|+|+|+++++++
T Consensus       156 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        156 FSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRST-YGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHh-hccccCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999753210         0 0111111   11111 12367889999999999999


Q ss_pred             cC
Q 044670          228 TD  229 (302)
Q Consensus       228 s~  229 (302)
                      +.
T Consensus       235 ~~  236 (273)
T PRK06182        235 TA  236 (273)
T ss_pred             hC
Confidence            74

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=2.1e-35  Score=254.82  Aligned_cols=242  Identities=33%  Similarity=0.465  Sum_probs=206.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+........+   +.++.++.+|++|++++.++++++.+.+++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999976655544433   345888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~  156 (302)
                      +|++|||+|....  .++.+.+.+++++.+++|+.+++.+++.+++.|.+++.+++|++||..+. .+.++...|+.||+
T Consensus        84 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~  161 (251)
T PRK12826         84 LDILVANAGIFPL--TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKA  161 (251)
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHH
Confidence            9999999997654  46667889999999999999999999999999977778899999999887 77788899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.|+++++++||.++|+.......  .......... .+.+++.+++|+|++++++++....+++|
T Consensus       162 a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~~~~~~~g  238 (251)
T PRK12826        162 GLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD--AQWAEAIAAA-IPLGRLGEPEDIAAAVLFLASDEARYITG  238 (251)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc--hHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence            99999999999998889999999999999998654421  1111122222 22367899999999999999877778899


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++.+|||...
T Consensus       239 ~~~~~~~g~~~  249 (251)
T PRK12826        239 QTLPVDGGATL  249 (251)
T ss_pred             cEEEECCCccC
Confidence            99999999764

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.2e-35  Score=288.29  Aligned_cols=243  Identities=34%  Similarity=0.483  Sum_probs=204.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G-EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+    + ..+..+.+|++|+++++++++++.+.+
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999999887766554443    1 356788999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      |++|+||||||....  .++.+.+.++|+..+++|+.+++++++.+++.|.+++ .++||++||..+..+.++..+|++|
T Consensus       492 g~iDilV~nAG~~~~--~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aS  569 (676)
T TIGR02632       492 GGVDIVVNNAGIATS--SPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAA  569 (676)
T ss_pred             CCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHH
Confidence            999999999997653  4677788999999999999999999999999997664 5799999999999898999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCC--cccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHH
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSG--ISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAA  223 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~--~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  223 (302)
                      |++++.+++.++.|+.++||+||+|+||.|.++  +.....         .........+... .+.++.++++|+|+++
T Consensus       570 KaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~~l~r~v~peDVA~av  648 (676)
T TIGR02632       570 KAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKR-TLLKRHIFPADIAEAV  648 (676)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhc-CCcCCCcCHHHHHHHH
Confidence            999999999999999999999999999999753  211110         0111222222222 3347889999999999


Q ss_pred             HHhccCCCCCccccEEeeCCCcc
Q 044670          224 LYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       224 ~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      .+++++...++||+++.+|||..
T Consensus       649 ~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       649 FFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHhCCcccCCcCcEEEECCCch
Confidence            99998777899999999999965

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-35  Score=253.54  Aligned_cols=240  Identities=40%  Similarity=0.551  Sum_probs=206.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |.+|++|||||+|+||.+++++|+++|++|+++ .|+++........+   +.++.++.+|++|++++.++++.+.+.++
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999998 88877665554443   34688899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++|||+|....  .+..+.+.+++++.+++|+.+++.+++.+.+.+.+++.+++|++||..+..+.+....|+.||+
T Consensus        83 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~  160 (247)
T PRK05565         83 KIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKG  160 (247)
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHH
Confidence            99999999998743  4667788999999999999999999999999998777889999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.||++++++||++.|++.....  +.........  .+.+++.+++|++++++++++.....++|
T Consensus       161 a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~~~~~~~~~g  236 (247)
T PRK05565        161 AVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS--EEDKEGLAEE--IPLGRLGKPEEIAKVVLFLASDDASYITG  236 (247)
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccC--hHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCCccCCccC
Confidence            9999999999999888999999999999998765542  2222222222  12256789999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +++.+|+|+.
T Consensus       237 ~~~~~~~~~~  246 (247)
T PRK05565        237 QIITVDGGWT  246 (247)
T ss_pred             cEEEecCCcc
Confidence            9999999964

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-35  Score=253.82  Aligned_cols=239  Identities=31%  Similarity=0.491  Sum_probs=199.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++++++||||++|||.++++.|+++|++|++++|+.++.+...+.+   +.++.++.+|++++++++++++.+.+.+++
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987666554443   457888999999999999999999988889


Q ss_pred             ccEEEEcccCCCCCCC------CC-CCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCCh
Q 044670           78 LDIMYNNAGIVDRGFA------SV-LDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSP  149 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~------~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~  149 (302)
                      +|++|||||.......      .+ .+.+.++++.++++|+.+++.+++.+.+.|.++ ..++||++||.+ ..+.++..
T Consensus        83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~  161 (253)
T PRK08217         83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQT  161 (253)
T ss_pred             CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCc
Confidence            9999999997543110      11 566789999999999999999999999998655 457899998874 45667889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .|++||++++.++++++.++.++||++++++||++.|++....  .+...+.+....  +.+++.+++|+++++.++++ 
T Consensus       162 ~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~l~~-  236 (253)
T PRK08217        162 NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMI--PVGRLGEPEEIAHTVRFIIE-  236 (253)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcC--CcCCCcCHHHHHHHHHHHHc-
Confidence            9999999999999999999988999999999999999987543  344444433332  23678899999999999995 


Q ss_pred             CCCCccccEEeeCCCcc
Q 044670          230 EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~  246 (302)
                       ..+++|+++.+|||+.
T Consensus       237 -~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        237 -NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             -CCCcCCcEEEeCCCcc
Confidence             3578999999999974

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-36  Score=270.46  Aligned_cols=221  Identities=26%  Similarity=0.314  Sum_probs=191.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~   85 (334)
T PRK07109          6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP   85 (334)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            46899999999999999999999999999999999988776665544   467889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.+++++++++|+.+++++++.++++|.+++.++||++||..+..+.+....|++||++
T Consensus        86 iD~lInnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a  163 (334)
T PRK07109         86 IDTWVNNAMVTVF--GPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHA  163 (334)
T ss_pred             CCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHH
Confidence            9999999997653  57788899999999999999999999999999988778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCC--CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          158 IIALVKILAAELRQ--YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       158 ~~~~~~~la~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++.|+++++.|+..  .+|++++|+||.+.||+.....       ........+.++..+|+|+|++++++++++
T Consensus       164 ~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~-------~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        164 IRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR-------SRLPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh-------hhccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999875  4799999999999998754211       111111122256789999999999999754

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=253.39  Aligned_cols=237  Identities=31%  Similarity=0.458  Sum_probs=199.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC----ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |.+|+++||||+||||+++++.|+++|++|++++|.    .+..+++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            467999999999999999999999999999987653    33333333332   45788999999999999999999999


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH-HhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA-RVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      .++++|++|||||....  .++.+.+.++|++.+++|+.+++.+++++. +.+.+++.+++|++||..+..+.+++..|+
T Consensus        84 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~  161 (249)
T PRK12827         84 EFGRLDILVNNAGIATD--AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYA  161 (249)
T ss_pred             HhCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhH
Confidence            98999999999998764  467778899999999999999999999999 666656678999999999988888999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      .||++++.+++.++.++.+.||++++++||+++|++.......    .......  +...+.+++|+++.+++++++...
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~--~~~~~~~~~~va~~~~~l~~~~~~  235 (249)
T PRK12827        162 ASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPV--PVQRLGEPDEVAALVAFLVSDAAS  235 (249)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhC--CCcCCcCHHHHHHHHHHHcCcccC
Confidence            9999999999999999998899999999999999976543211    1122221  225567999999999999988778


Q ss_pred             CccccEEeeCCCc
Q 044670          233 DVTGLNLVVDGGF  245 (302)
Q Consensus       233 ~~~G~~~~~~gG~  245 (302)
                      .++|+.+.+|||+
T Consensus       236 ~~~g~~~~~~~g~  248 (249)
T PRK12827        236 YVTGQVIPVDGGF  248 (249)
T ss_pred             CccCcEEEeCCCC
Confidence            8999999999985

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=6.8e-35  Score=250.89  Aligned_cols=241  Identities=36%  Similarity=0.526  Sum_probs=204.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||||+||++++++|+++|++|+++.|+... .......+   +.++.++.+|+++++++.++++++.+.++
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            578999999999999999999999999999888776543 33333322   45788899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++||+||....  .+..+.+.+++++.+++|+.+++.+++.+.+.+.+.+.+++|++||..+..+.++...|+.+|+
T Consensus        83 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~  160 (248)
T PRK05557         83 GVDILVNNAGITRD--NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA  160 (248)
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence            99999999997654  4556778899999999999999999999999997777789999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.++++++++||++.+++....  .+.......... + .+++.+++|+++++.+++.....+++|
T Consensus       161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~-~-~~~~~~~~~va~~~~~l~~~~~~~~~g  236 (248)
T PRK05557        161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQI-P-LGRLGQPEEIASAVAFLASDEAAYITG  236 (248)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcC-C-CCCCcCHHHHHHHHHHHcCcccCCccc
Confidence            999999999999988899999999999999876543  233333333222 2 266889999999999999877778899


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||+.+
T Consensus       237 ~~~~i~~~~~~  247 (248)
T PRK05557        237 QTLHVNGGMVM  247 (248)
T ss_pred             cEEEecCCccC
Confidence            99999999764

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5e-35  Score=256.66  Aligned_cols=227  Identities=23%  Similarity=0.253  Sum_probs=191.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+|++|||||+||||++++++|+++|++|++++|+.+..+.+.+..+.++.++.+|++|++++.++++.+.+.++++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            57899999999999999999999999999999999887776665555678889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||....  .+..+.+.++|++++++|+.|+++++++++|+|++++.++||++||.++..+.+++..|++||++++.+
T Consensus        83 v~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~  160 (277)
T PRK06180         83 VNNAGYGHE--GAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI  160 (277)
T ss_pred             EECCCccCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence            999998654  467788899999999999999999999999999877778999999999998889999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHH---HHHH-hccccCCCCCCHHHHHHHHHHhccCC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILE---AFLS-EMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~---~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++.++.|+.++|+++++|+||++.|++.....     ..+....   .... .......++.+|+|+|++++++++.+
T Consensus       161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        161 SESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999998643211     1111111   1110 01112256789999999999998654

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-35  Score=258.25  Aligned_cols=214  Identities=32%  Similarity=0.443  Sum_probs=190.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++|||||||||++++++|+++|++|++++|+++..++..+.++ ++.++.+|++|+++++++++++.+.++++|+
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG-LVVGGPLDVTDPASFAAFLDAVEADLGPIDV   81 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999999888777666554 5788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||.++..+.+++..|++||++++.
T Consensus        82 li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  159 (273)
T PRK07825         82 LVNNAGVMPV--GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVG  159 (273)
T ss_pred             EEECCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHH
Confidence            9999998764  56777889999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.++.|+.+.||++++|+||++.|++......            .. .....+++|+|+.++.++...
T Consensus       160 ~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~-~~~~~~~~~va~~~~~~l~~~  216 (273)
T PRK07825        160 FTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG------------AK-GFKNVEPEDVAAAIVGTVAKP  216 (273)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCcCcchhhccccc------------cc-CCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999987654310            00 124789999999999998654

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-35  Score=274.92  Aligned_cols=239  Identities=28%  Similarity=0.339  Sum_probs=201.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc--cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD--NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||++|||||++|||++++++|+++|++|++++|..  +...++...++  ..++.+|++|+++++++++.+.++++++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG--GTALALDITAPDAPARIAEHLAERHGGL  285 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence            3689999999999999999999999999999998853  23334444443  3578999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||+...  .++.+.+.++|+.++++|+.+++++.+.+.+.+..+..++||++||.++..+.++...|+++|+++
T Consensus       286 d~vi~~AG~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal  363 (450)
T PRK08261        286 DIVVHNAGITRD--KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGV  363 (450)
T ss_pred             CEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHH
Confidence            999999998764  467788999999999999999999999999965445578999999999988888999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.|++.++.++.++||++|+|+||++.|++......   ..........+ ..+...|+|+++++.|++++...++||++
T Consensus       364 ~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~---~~~~~~~~~~~-l~~~~~p~dva~~~~~l~s~~~~~itG~~  439 (450)
T PRK08261        364 IGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF---ATREAGRRMNS-LQQGGLPVDVAETIAWLASPASGGVTGNV  439 (450)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch---hHHHHHhhcCC-cCCCCCHHHHHHHHHHHhChhhcCCCCCE
Confidence            999999999999999999999999999988654321   11122222222 35678999999999999999889999999


Q ss_pred             EeeCCCccc
Q 044670          239 LVVDGGFSV  247 (302)
Q Consensus       239 ~~~~gG~~~  247 (302)
                      +.+||+..+
T Consensus       440 i~v~g~~~~  448 (450)
T PRK08261        440 VRVCGQSLL  448 (450)
T ss_pred             EEECCCccc
Confidence            999998654

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.7e-35  Score=251.27  Aligned_cols=242  Identities=24%  Similarity=0.320  Sum_probs=197.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+++++|||||+||||++++++|+++|++|++..|+. ........   ..+.++.++.+|+++++++.++++++.+.++
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999998877543 33322222   2235677889999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++|||||....  .+..+.+.+.+++.+++|+.+++.+++++.+++.+  .+++|++||.++..+.+++..|++||+
T Consensus        84 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~  159 (252)
T PRK06077         84 VADILVNNAGLGLF--SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKA  159 (252)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHH
Confidence            99999999998654  46667788889999999999999999999999864  479999999999989999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++.+++.++.|+.+ +|+++.+.||++.|++....... ......+.... .+.+++++|+|+|++++++++.  ...+
T Consensus       160 ~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~~~~~--~~~~  235 (252)
T PRK06077        160 AVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKF-TLMGKILDPEEVAEFVAAILKI--ESIT  235 (252)
T ss_pred             HHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHHhc-CcCCCCCCHHHHHHHHHHHhCc--cccC
Confidence            999999999999988 99999999999999875432110 00111222222 2236789999999999999963  3568


Q ss_pred             ccEEeeCCCcccCCC
Q 044670          236 GLNLVVDGGFSVANP  250 (302)
Q Consensus       236 G~~~~~~gG~~~~~~  250 (302)
                      |+++++|+|..+...
T Consensus       236 g~~~~i~~g~~~~~~  250 (252)
T PRK06077        236 GQVFVLDSGESLKGG  250 (252)
T ss_pred             CCeEEecCCeeccCC
Confidence            999999999876543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.1e-34  Score=250.38  Aligned_cols=229  Identities=20%  Similarity=0.259  Sum_probs=192.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++||||+||||.+++++|+++|++|++++|+++..+.+...++.++.++.+|++|.++++++++++.+.++++|++||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            47999999999999999999999999999999988877776666667889999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||.... ..+..+.+.+++++++++|+.+++.+++.++++|.+++.++||++||.++..+.++...|+.||++++.+++
T Consensus        81 ~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~  159 (248)
T PRK10538         81 NAGLALG-LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_pred             CCCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHH
Confidence            9997532 136667889999999999999999999999999987777899999999888888888999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCC--CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNS--INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      .++.++.++||++++|+||++.|++.....  ...........   .  ....+|+|+|++++++++.+..+.+++.
T Consensus       160 ~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ---N--TVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             HHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhcc---c--cCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            999999999999999999999866543221  11111111111   1  3457999999999999987665554543

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.5e-34  Score=247.12  Aligned_cols=240  Identities=36%  Similarity=0.506  Sum_probs=205.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |.+|++|||||+|+||.+++++|+++|++|++++|+++..+.....+   +.++.++.+|++|++++.++++++.+.+++
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999999987765554433   457889999999999999999999988899


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++||+||....  .+..+.+.+++++.+++|+.+++++++.+.+++.+.+.++||++||..+..+..+...|+.+|++
T Consensus        83 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  160 (246)
T PRK05653         83 LDILVNNAGITRD--ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG  160 (246)
T ss_pred             CCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence            9999999997654  45667788999999999999999999999999977777899999999888888888999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.+++++.+.|+++++++||.+.+++....  .....+.....  .+.+.+.+++|+++.+.+++++....++|+
T Consensus       161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  236 (246)
T PRK05653        161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGL--PEEVKAEILKE--IPLGRLGQPEEVANAVAFLASDAASYITGQ  236 (246)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--hHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCchhcCccCC
Confidence            99999999999988899999999999999876431  11122222222  123668999999999999998777788999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.++||..
T Consensus       237 ~~~~~gg~~  245 (246)
T PRK05653        237 VIPVNGGMY  245 (246)
T ss_pred             EEEeCCCee
Confidence            999999975

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=248.11  Aligned_cols=232  Identities=28%  Similarity=0.359  Sum_probs=199.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|++|||||+|+||++++++|+++|++|++++|+.+...+....+ .....++.+|++|.++++++++++.+.++++|
T Consensus         5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcC
Confidence            46899999999999999999999999999999999877655443333 23467788999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++||++|....  .+..+.+.+++++.+++|+.+++.+++++.+.+..++.+++|++||..+..+.+++..|+.+|++++
T Consensus        85 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~  162 (239)
T PRK12828         85 ALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVA  162 (239)
T ss_pred             EEEECCcccCc--CChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHH
Confidence            99999997643  3556678899999999999999999999999997777899999999998888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.++.++||+++.++||++.+++.......            .....+++++|+|+++++++++...+++|+.+
T Consensus       163 ~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~------------~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~  230 (239)
T PRK12828        163 RLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPD------------ADFSRWVTPEQIAAVIAFLLSDEAQAITGASI  230 (239)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCc------------hhhhcCCCHHHHHHHHHHHhCcccccccceEE
Confidence            999999999988899999999999999854322110            01144789999999999999877778899999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||+.
T Consensus       231 ~~~g~~~  237 (239)
T PRK12828        231 PVDGGVA  237 (239)
T ss_pred             EecCCEe
Confidence            9999964

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=2e-34  Score=248.19  Aligned_cols=238  Identities=28%  Similarity=0.409  Sum_probs=196.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+++||||+||||++++++|+++|++|+++ .|+.+...+....+   +.++.++.+|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999999874 56655554443332   45688899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC---CCCEEEEEcCcccccCCCC-ChhHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ---HKGCILFTASACTEIAGIG-SPAYTVSK  155 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~~sS~~~~~~~~~-~~~Y~~sK  155 (302)
                      ++|||||.... ..+..+.+.++++.++++|+.+++.+++.+++.+.++   ..+++|++||.++..+.++ +..|+.+|
T Consensus        82 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFT-QCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            99999997533 1456778889999999999999999999999998654   2578999999988777665 46899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.++.++||++++++||+++||+..... .+.......... + .++..+++|+|+++++++++...+++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~-~-~~~~~~~~dva~~~~~~~~~~~~~~~  237 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG-EPGRVDRVKSNI-P-MQRGGQPEEVAQAIVWLLSDKASYVT  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC-CHHHHHHHHhcC-C-CCCCcCHHHHHHHHHhhcChhhcCcc
Confidence            99999999999999889999999999999999765432 223222222222 2 25567999999999999988778899


Q ss_pred             ccEEeeCCCc
Q 044670          236 GLNLVVDGGF  245 (302)
Q Consensus       236 G~~~~~~gG~  245 (302)
                      |+++.+|||.
T Consensus       238 g~~~~~~g~~  247 (247)
T PRK09730        238 GSFIDLAGGK  247 (247)
T ss_pred             CcEEecCCCC
Confidence            9999999973

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.7e-34  Score=246.30  Aligned_cols=241  Identities=31%  Similarity=0.448  Sum_probs=202.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH-HHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-QALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||||+||++++++|+++|++|+++.|+.... +.+..   ..+.++.++.+|++|++++.++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999998876665432 22222   2245688999999999999999999998889


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|++||+||....  .++.+.+.+++++.+++|+.+++++++.+.+++.+.+.+++|++||..+..+.+++..|+.+|+
T Consensus        84 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~  161 (249)
T PRK12825         84 RIDILVNNAGIFED--KPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKA  161 (249)
T ss_pred             CCCEEEECCccCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHH
Confidence            99999999997553  4566778899999999999999999999999998777889999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+.|+++++++||+++|++...... ......   ....+.+++.+++|+++.+.++++......+|
T Consensus       162 ~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g  237 (249)
T PRK12825        162 GLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE-EAREAK---DAETPLGRSGTPEDIARAVAFLCSDASDYITG  237 (249)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc-hhHHhh---hccCCCCCCcCHHHHHHHHHHHhCccccCcCC
Confidence            99999999999998889999999999999998765421 111111   11223366899999999999999877778899


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++.++||..+
T Consensus       238 ~~~~i~~g~~~  248 (249)
T PRK12825        238 QVIEVTGGVDV  248 (249)
T ss_pred             CEEEeCCCEee
Confidence            99999999753

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-34  Score=249.27  Aligned_cols=243  Identities=33%  Similarity=0.480  Sum_probs=202.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|++|||||+|+||++++++|+++|++|++++|+++..+.+.+... .++.++.+|++|++++.++++++.+.++++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            578999999999999999999999999999999998877766655442 2468899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC-CEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +|||+||.... ..+....+.+++++++++|+.+++.+++.+.+.+...+. ++|+++||.++..+.+++..|+.+|+++
T Consensus        89 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~  167 (264)
T PRK12829         89 VLVNNAGIAGP-TGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAV  167 (264)
T ss_pred             EEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHH
Confidence            99999998632 145667788999999999999999999999998876555 7899999988888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.+++.++.++.+.++++++++||+++|++......         ...........  .+.+++.+++|+++++.+++++
T Consensus       168 ~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~a~~~~~l~~~  245 (264)
T PRK12829        168 VGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEK--ISLGRMVEPEDIAATALFLASP  245 (264)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCc
Confidence            999999999998889999999999999987643210         01111122221  1235689999999999999976


Q ss_pred             CCCCccccEEeeCCCcc
Q 044670          230 EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~  246 (302)
                      .....+|+.+.+|||..
T Consensus       246 ~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        246 AARYITGQAISVDGNVE  262 (264)
T ss_pred             cccCccCcEEEeCCCcc
Confidence            66678999999999965

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-34  Score=252.70  Aligned_cols=240  Identities=20%  Similarity=0.300  Sum_probs=197.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||+||||+++++.|+++|++|++++|+.+..+.+.+..     +.++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            67899999999999999999999999999999999887766654432     2468899999999999999 99998889


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|++|||||....  .+..+.+.+++++.+++|+.+++.+++.+++.|.+.+.++||++||..+..+.++...|+.||
T Consensus        80 ~~id~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         80 GRIDLLVNNAGYANG--GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CCeeEEEECCccccc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhH
Confidence            999999999997664  456677889999999999999999999999999877778999999998888889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-----------CHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-----------NPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      ++++.++++++.++.++||++++++||+++|++......           ................+++.+++|+|++++
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  237 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIV  237 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHH
Confidence            999999999999999999999999999999997542110           011112222221222356889999999999


Q ss_pred             HhccCCCCCccccEEeeCCCcc
Q 044670          225 YLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++++....   +..+++..+..
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~  256 (280)
T PRK06914        238 EIAESKRP---KLRYPIGKGVK  256 (280)
T ss_pred             HHHcCCCC---CcccccCCchH
Confidence            99976543   24566655544

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=249.84  Aligned_cols=236  Identities=19%  Similarity=0.236  Sum_probs=193.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc----
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL----   78 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i----   78 (302)
                      |+++||||+||||++++++|+++|++|++++|+. +..+.+.+..+.+++++.+|++|+++++++++++.+.++..    
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            6899999999999999999999999999999987 44444444445678899999999999999999988776532    


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      .++|||||.... ..++.+.+.++|.+.+++|+.+++.+++.+++.|.+. ..++||++||..+..+.+++..|+.||++
T Consensus        82 ~~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa  160 (251)
T PRK06924         82 IHLINNAGMVAP-IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG  160 (251)
T ss_pred             eEEEEcceeccc-CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence            289999997543 2467788999999999999999999999999999764 35799999999998898999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCC----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          158 IIALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       158 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++.+++.++.|++  +.||+|++|+||++.|++......    .....+.+....  +.+++.+|+|+|+.+++++++. 
T Consensus       161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK--EEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh--hcCCcCCHHHHHHHHHHHHhcc-
Confidence            9999999999975  468999999999999987543110    111122222222  2267899999999999999874 


Q ss_pred             CCccccEEeeCC
Q 044670          232 SDVTGLNLVVDG  243 (302)
Q Consensus       232 ~~~~G~~~~~~g  243 (302)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            688999998876

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=252.13  Aligned_cols=239  Identities=21%  Similarity=0.264  Sum_probs=198.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CC-CeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GE-DVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+++||||++|||++++++|+++|++|++++|+.+..+...+++   +. ...++.+|++|+++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            58999999999999999999999999999999887766555443   22 245678999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||....  .++.+.+.++++..+++|+.+++.+++.++|.|.++ ..++||++||..+..+.++...|++||+++
T Consensus        81 ~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGISAW--GTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            99999997643  567788999999999999999999999999999654 358999999998888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      +++++.++.|+.++||+|++|+||+++|++......     ..+....+...   ..++..+++|+|++++++++. ..+
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~vA~~~~~~~~~-~~~  234 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDR---FRGHAVTPEKAAEKILAGVEK-NRY  234 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHh---cccCCCCHHHHHHHHHHHHhc-CCe
Confidence            999999999999999999999999999998654311     11112222221   125578999999999999964 457


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++++.+.+++|+.+.
T Consensus       235 ~~~~~~~~~~~~~~~  249 (272)
T PRK07832        235 LVYTSPDIRALYWFK  249 (272)
T ss_pred             EEecCcchHHHHHHH
Confidence            778877788876543

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-34  Score=253.08  Aligned_cols=224  Identities=24%  Similarity=0.258  Sum_probs=185.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~   80 (302)
                      .+|+++||||+||||++++++|+++|++|++++|+.+..+.+..   ..++++.+|++|+++++++++++.+.+ +++|+
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~---~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~   79 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA---EGLEAFQLDYAEPESIAALVAQVLELSGGRLDA   79 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CCceEEEccCCCHHHHHHHHHHHHHHcCCCccE
Confidence            37899999999999999999999999999999999877765543   357889999999999999999997766 68999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.+++++++++|+.|++.+++.++|.|.+++.++||++||..+..+.++...|++||++++.
T Consensus        80 li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  157 (277)
T PRK05993         80 LFNNGAYGQP--GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEG  157 (277)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence            9999998664  46778889999999999999999999999999988878999999999999888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC------------HHHHHHHH---HhccccCCCCCCHHHHHHHHHH
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN------------PAILEAFL---SEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      ++++++.|+.++||+|++|+||++.|++.......            ........   ...........+|+++|+.++.
T Consensus       158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~~  237 (277)
T PRK05993        158 LSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLLH  237 (277)
T ss_pred             HHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHH
Confidence            99999999999999999999999999976532100            00010000   0101111225689999999998


Q ss_pred             hccCC
Q 044670          226 LATDE  230 (302)
Q Consensus       226 l~s~~  230 (302)
                      .+...
T Consensus       238 a~~~~  242 (277)
T PRK05993        238 ALTAP  242 (277)
T ss_pred             HHcCC
Confidence            88543

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3e-34  Score=247.46  Aligned_cols=229  Identities=23%  Similarity=0.383  Sum_probs=196.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCC--CHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVT--SEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~--~~~~v~~~~~~~~~~   74 (302)
                      +++|+++||||+++||.+++++|+++|++|++++|+.+..+.+.+++    ..++.++.+|++  ++++++++++.+.+.
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   89 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ   89 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999987766655444    235667778886  889999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||..... .++.+.+.+++++.+++|+.+++++++.+.+.|.+++.++||++||..+..+.+++..|++|
T Consensus        90 ~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         90 FGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             hCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence            99999999999975431 35667788999999999999999999999999988778999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.++...||++++++||++.|++.......          ..+  .++.+|+|+++.+++++++...++
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~~~~~~  236 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------EDP--QKLKTPEDIMPLYLYLMGDDSRRK  236 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------ccc--cCCCCHHHHHHHHHHHhCcccccc
Confidence            99999999999999999999999999999999864322111          011  457899999999999999888899


Q ss_pred             cccEEeeC
Q 044670          235 TGLNLVVD  242 (302)
Q Consensus       235 ~G~~~~~~  242 (302)
                      +|+++...
T Consensus       237 ~g~~~~~~  244 (247)
T PRK08945        237 NGQSFDAQ  244 (247)
T ss_pred             CCeEEeCC
Confidence            99987543

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=6.4e-34  Score=246.18  Aligned_cols=241  Identities=35%  Similarity=0.512  Sum_probs=201.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+   +.++.++.+|++|++++.++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999999999999999887666655443   45688899999999999999999999888999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++|||||....  .+..+.+.+++++++++|+.+++.+++.+++.|.+.+.+++|++||..+..+.+.+..|+.+|++++
T Consensus        81 ~vi~~a~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~  158 (255)
T TIGR01963        81 ILVNNAGIQHV--APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLI  158 (255)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHH
Confidence            99999997653  3556678889999999999999999999999997777789999999988888888999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++.++.++.+.+|++++++||+++|++......         ........+... ...+.+++++|+|+++++++++.
T Consensus       159 ~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~~~~~~~~~~  237 (255)
T TIGR01963       159 GLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPG-QPTKRFVTVDEVAETALFLASDA  237 (255)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHcc-CccccCcCHHHHHHHHHHHcCcc
Confidence            99999999998889999999999999986432110         011111111111 12256899999999999999876


Q ss_pred             CCCccccEEeeCCCcc
Q 044670          231 ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~  246 (302)
                      ...++|+++++|||+.
T Consensus       238 ~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       238 AAGITGQAIVLDGGWT  253 (255)
T ss_pred             ccCccceEEEEcCccc
Confidence            5667999999999975

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=250.01  Aligned_cols=222  Identities=27%  Similarity=0.363  Sum_probs=189.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+++||||+||||++++++|+++|++|++++|+.+..+.....+   +.++.++.+|++|+++++++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999987776655443   457888999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+++++
T Consensus        81 lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~  158 (270)
T PRK05650         81 IVNNAGVASG--GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVA  158 (270)
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999998754  46777889999999999999999999999999987777899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++++++.|+.+.||++++|+||++.|++...................  .+..++++|+|+.++..++.
T Consensus       159 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~vA~~i~~~l~~  225 (270)
T PRK05650        159 LSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLL--EKSPITAADIADYIYQQVAK  225 (270)
T ss_pred             HHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHh--hcCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999987654322111111111111  13467999999999998864

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=245.40  Aligned_cols=225  Identities=27%  Similarity=0.317  Sum_probs=192.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++|+++||||+|+||++++++|+++|++|++++|+.+....+.+.+   +.++.++.+|++|++++.++++++.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999887666554433   3578899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||....  .+..+.+.+++++++++|+.+++++++.+++.|.+++.++||++||..+..+.+++..|+.||+++
T Consensus        85 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~  162 (241)
T PRK07454         85 DVLINNAGMAYT--GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAAL  162 (241)
T ss_pred             CEEEECCCccCC--CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHH
Confidence            999999997654  466777889999999999999999999999999877779999999999888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.++.++||++++|+||++.|++........    . .     ...+..+++|+|++++++++.+...+.++.
T Consensus       163 ~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~----~-~-----~~~~~~~~~~va~~~~~l~~~~~~~~~~~~  232 (241)
T PRK07454        163 AAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQA----D-F-----DRSAMLSPEQVAQTILHLAQLPPSAVIEDL  232 (241)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCcccCCccccccccc----c-c-----ccccCCCHHHHHHHHHHHHcCCccceeeeE
Confidence            99999999999999999999999999999854321000    0 0     013467999999999999987665555543

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.2e-34  Score=278.10  Aligned_cols=244  Identities=38%  Similarity=0.526  Sum_probs=208.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.||++|||||+||||++++++|+++|++|++++|+.+..+.....++.  .+.++.+|++|+++++++++++.+.+|++
T Consensus       420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~i  499 (681)
T PRK08324        420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGV  499 (681)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999998887776665543  78899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC-CEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |++|||||....  .++.+.+.++|++.+++|+.+++.+++.+.+.|.+++. ++||++||..+..+.++...|++||++
T Consensus       500 DvvI~~AG~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa  577 (681)
T PRK08324        500 DIVVSNAGIAIS--GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAA  577 (681)
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHH
Confidence            999999998765  57778899999999999999999999999999987664 899999999999888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcc--cCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGL--VSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v--~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++.+++.++.++.++||++|+|+||.|  .|++......         ........... ..+.+++++++|+|++++++
T Consensus       578 ~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~l~~~v~~~DvA~a~~~l  656 (681)
T PRK08324        578 ELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRA-RNLLKREVTPEDVAEAVVFL  656 (681)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHh-cCCcCCccCHHHHHHHHHHH
Confidence            999999999999999999999999999  5654432210         11111122222 22347789999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++.....+|+++++|||...
T Consensus       657 ~s~~~~~~tG~~i~vdgG~~~  677 (681)
T PRK08324        657 ASGLLSKTTGAIITVDGGNAA  677 (681)
T ss_pred             hCccccCCcCCEEEECCCchh
Confidence            987677889999999999653

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=248.50  Aligned_cols=212  Identities=24%  Similarity=0.260  Sum_probs=183.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..+.+..  ++.++.+|++|++++.++++++.++++++|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            57999999999999999999999999999999998877766555432  6889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +|||||..... ....+.+.+++++++++|+.|++++++.++|.|.+++.++||++||.++..+.+....|++||++++.
T Consensus        82 lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         82 VIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            99999976431 12233678899999999999999999999999987778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++++++.|+.++||++++|+||++.|++.....            ...  ....+++++++.++.++..
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~--~~~~~~~~~a~~~~~~l~~  215 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPM--PFLMDADRFAARAARAIAR  215 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCC--CCccCHHHHHHHHHHHHhC
Confidence            999999999999999999999999998754321            011  2246899999999988854

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-34  Score=250.16  Aligned_cols=222  Identities=22%  Similarity=0.270  Sum_probs=187.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++|+++||||+||||++++++|+++|++|++++|+.+.....     .+++++.+|++|+++++++++.+.+.++++|+|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-----PGVELLELDVTDDASVQAAVDEVIARAGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-----CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence            578999999999999999999999999999999986554321     357889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||....  .+..+.+.+++++++++|+.|++.+++.+++.|.+++.++||++||..+..+.+....|++||++++.+
T Consensus        78 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (270)
T PRK06179         78 VNNAGVGLA--GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY  155 (270)
T ss_pred             EECCCCCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence            999998654  567778899999999999999999999999999888889999999999988888899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH----H---HHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP----A---ILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++.++.|+.++||++++|+||++.|++........    .   ..............+..+++++|+.++.+++..
T Consensus       156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999765432111    0   001111111112245679999999999998654

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.1e-34  Score=257.11  Aligned_cols=210  Identities=20%  Similarity=0.246  Sum_probs=173.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .|++++|||||+|||++++++|+++|++|++++|++++.+++.+++     +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            4899999999999999999999999999999999998877766554     2457788999985  23334444544444


Q ss_pred             --CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-C-CCCChhHH
Q 044670           77 --KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-A-GIGSPAYT  152 (302)
Q Consensus        77 --~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-~-~~~~~~Y~  152 (302)
                        ++|++|||||+......++.+.+.+++++++++|+.|++.+++.++|.|.+++.|+||++||.++.. + .++...|+
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~  209 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYA  209 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHH
Confidence              4669999999864322356778899999999999999999999999999888889999999998864 3 57889999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      +||++++.|+++++.|+.++||+|++|+||+|.|++.....             ..  ....+|+++|+.++..+.
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~-------------~~--~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR-------------SS--FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC-------------CC--CCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999865211             00  114589999999998873

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=9.4e-36  Score=231.22  Aligned_cols=241  Identities=29%  Similarity=0.430  Sum_probs=213.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +|-+++||||.+|+|++.+++|+.+|+.|++.+..+++..+..+++++++.|.++|++++++|+.++...+.+||++|.+
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            57789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEcccCCCC----CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEcCcccccCCCCChhH
Q 044670           82 YNNAGIVDR----GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        82 v~~Ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      |||||+...    .++.-..-+.|+|++.+++|++|+|++++.-...|-.+      ..|.||++.|.+++.+..+..+|
T Consensus        88 vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaay  167 (260)
T KOG1199|consen   88 VNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAY  167 (260)
T ss_pred             eeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhh
Confidence            999998642    11233345689999999999999999999999888543      25789999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||.++..|+--+++.++..|||++.|.||.+.||+...   .++.+..++.+..|...|+.+|.|-+..+..+.  +.
T Consensus       168 saskgaivgmtlpiardla~~gir~~tiapglf~tpllss---lpekv~~fla~~ipfpsrlg~p~eyahlvqaii--en  242 (260)
T KOG1199|consen  168 SASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSS---LPEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII--EN  242 (260)
T ss_pred             hcccCceEeeechhhhhcccCceEEEeecccccCChhhhh---hhHHHHHHHHHhCCCchhcCChHHHHHHHHHHH--hC
Confidence            9999999999999999999999999999999999999865   367777777665555588999999999988777  46


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|++|.+||...+
T Consensus       243 p~lngevir~dgalrm  258 (260)
T KOG1199|consen  243 PYLNGEVIRFDGALRM  258 (260)
T ss_pred             cccCCeEEEecceecC
Confidence            7899999999997543

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.2e-34  Score=274.41  Aligned_cols=226  Identities=29%  Similarity=0.374  Sum_probs=191.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++++++|||||+||||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|++++.++++++.+.+|+
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            46789999999999999999999999999999999987777665543   457889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+...  .++.+.+.+++++++++|+.|+++++++++|.|.+++ .|+||++||.++..+.++...|++||+
T Consensus       393 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  470 (582)
T PRK05855        393 PDIVVNNAGIGMA--GGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKA  470 (582)
T ss_pred             CcEEEECCccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHH
Confidence            9999999998754  4677889999999999999999999999999998765 489999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHH---HHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILE---AFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.+++.++.|+.++||+|++|+||+|.|++.......   .+...   ......  +..+..+|+++|++++++++..
T Consensus       471 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        471 AVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKL--YQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhh--ccccCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999987653211   11111   111111  1133568999999999999653

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-34  Score=242.27  Aligned_cols=225  Identities=27%  Similarity=0.312  Sum_probs=185.4

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            7 IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         7 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      |||||++|||++++++|+++|++|++++|+.+..+.....+  +.+++++.+|++|++++.+++++    .+++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE----AGPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh----cCCCCEEEEC
Confidence            69999999999999999999999999999877766655544  45688999999999998887765    4789999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI  164 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (302)
                      +|....  .++.+.+.+++++++++|+.+++++++  .+.+  .+.++||++||.++..+.++...|+.||++++.+++.
T Consensus        77 ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~  150 (230)
T PRK07041         77 AADTPG--GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG  150 (230)
T ss_pred             CCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence            998654  466778899999999999999999999  4444  3468999999999998889999999999999999999


Q ss_pred             HHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeC
Q 044670          165 LAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVD  242 (302)
Q Consensus       165 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~  242 (302)
                      ++.|+.+  |++++++||++.|++......  ........... . +.+++.+|+|+|++++++++.  .+++|+.+.+|
T Consensus       151 la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~  224 (230)
T PRK07041        151 LALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAER-L-PARRVGQPEDVANAILFLAAN--GFTTGSTVLVD  224 (230)
T ss_pred             HHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeC
Confidence            9999875  999999999999988643211  11222222222 2 236688999999999999974  47899999999


Q ss_pred             CCccc
Q 044670          243 GGFSV  247 (302)
Q Consensus       243 gG~~~  247 (302)
                      ||..+
T Consensus       225 gg~~~  229 (230)
T PRK07041        225 GGHAI  229 (230)
T ss_pred             CCeec
Confidence            99754

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-33  Score=245.57  Aligned_cols=236  Identities=22%  Similarity=0.281  Sum_probs=191.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.|+++||||+||||++++++|+++|++|++++|+.+...+..+.+   +.++.++.+|++|++++.++++++.+.++++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI   88 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            5689999999999999999999999999999999876665544433   3567888999999999999999999989999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |++|||||....  .+..+.+.+++++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|+.||+++
T Consensus        89 d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  166 (274)
T PRK07775         89 EVLVSGAGDTYF--GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGL  166 (274)
T ss_pred             CEEEECCCcCCC--cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHH
Confidence            999999997653  456677889999999999999999999999998777778999999998888888888999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.+++.++.++.+.||++++++||+++|++......  ................+++.+++|+|++++++++...   .+
T Consensus       167 ~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~---~~  243 (274)
T PRK07775        167 EAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETPR---GA  243 (274)
T ss_pred             HHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCCC---CC
Confidence            999999999998889999999999999886543211  1111111111111122568999999999999997542   34


Q ss_pred             cEEeeC
Q 044670          237 LNLVVD  242 (302)
Q Consensus       237 ~~~~~~  242 (302)
                      .+++++
T Consensus       244 ~~~~~~  249 (274)
T PRK07775        244 HVVNME  249 (274)
T ss_pred             CeeEEe
Confidence            454444

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=245.50  Aligned_cols=238  Identities=20%  Similarity=0.270  Sum_probs=194.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .|++|||||+||||++++++|+++|++|+++.|+.+..+.+.+..+.++.++.+|++|.++++++++++.+.++++|+||
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47899999999999999999999999999999998777776666566789999999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV  162 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (302)
                      ||||....  .+..+.+.+++++.+++|+.++++++++++|+|++++.++||++||..+..+.++...|+.||++++.++
T Consensus        82 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  159 (276)
T PRK06482         82 SNAGYGLF--GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFV  159 (276)
T ss_pred             ECCCCCCC--cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHH
Confidence            99998764  4666778899999999999999999999999998777789999999988888888999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-------CHHHHHHHHHhccc-cCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSI-------NPAILEAFLSEMGN-LRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       163 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +.++.++.++||++++++||.+.|++......       .......+...... ...-..+++|++++++.++....   
T Consensus       160 ~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~a~~~~~~~~~---  236 (276)
T PRK06482        160 EAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPGDPQKMVQAMIASADQTP---  236 (276)
T ss_pred             HHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCCCHHHHHHHHHHHHcCCC---
Confidence            99999999999999999999998876533211       01111111111110 11225799999999998885432   


Q ss_pred             cccEEeeCCCc
Q 044670          235 TGLNLVVDGGF  245 (302)
Q Consensus       235 ~G~~~~~~gG~  245 (302)
                      .+..+++.+|.
T Consensus       237 ~~~~~~~g~~~  247 (276)
T PRK06482        237 APRRLTLGSDA  247 (276)
T ss_pred             CCeEEecChHH
Confidence            24556665553

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.6e-33  Score=239.85  Aligned_cols=238  Identities=32%  Similarity=0.407  Sum_probs=194.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++++|||||+||||++++++|+++|++|++++|+.. ..+.....+    +..+.++.+|++|.+++.++++++.+.++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999998643 333333222    24578899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.+++++++++|+.+++++++++.+.+.++ .+.+++++|.....+.++...|+.||+
T Consensus        85 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~  161 (249)
T PRK09135         85 RLDALVNNASSFYP--TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKA  161 (249)
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHH
Confidence            99999999997654  356667788999999999999999999999988654 578888888777777888899999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.++.+ ++++++++||+++||+..... ............  +.....+++|+++++.+++.+ ....+|
T Consensus       162 ~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d~a~~~~~~~~~-~~~~~g  236 (249)
T PRK09135        162 ALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF-DEEARQAILART--PLKRIGTPEDIAEAVRFLLAD-ASFITG  236 (249)
T ss_pred             HHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC-CHHHHHHHHhcC--CcCCCcCHHHHHHHHHHHcCc-cccccC
Confidence            999999999999876 799999999999999864322 223222333322  235677899999999888865 446799


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++++++|...
T Consensus       237 ~~~~i~~g~~~  247 (249)
T PRK09135        237 QILAVDGGRSL  247 (249)
T ss_pred             cEEEECCCeec
Confidence            99999999754

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-33  Score=249.43  Aligned_cols=214  Identities=25%  Similarity=0.323  Sum_probs=181.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||+||||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|++++.++++++.+.+++
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999987776665544   456788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCC--CHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-CCCCChhHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDT--PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-AGIGSPAYTVS  154 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-~~~~~~~Y~~s  154 (302)
                      +|++|||||....  .++.+.  +.++++.++++|+.|+++++++++|.|.+++.++||++||.++.. +.++...|++|
T Consensus       118 id~li~~AG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~as  195 (293)
T PRK05866        118 VDILINNAGRSIR--RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNAS  195 (293)
T ss_pred             CCEEEECCCCCCC--cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHH
Confidence            9999999998653  233332  457889999999999999999999999887789999999976654 35778899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      |++++++++.++.|+.++||+|++|+||++.|++......           ...  ....+|+++|+.++..+..
T Consensus       196 Kaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~-----------~~~--~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        196 KAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA-----------YDG--LPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc-----------ccC--CCCCCHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999998753210           001  1256999999999888853

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=5.6e-33  Score=237.89  Aligned_cols=235  Identities=31%  Similarity=0.474  Sum_probs=197.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +||||++++||.+++++|+++|++|++++|+. +..+...+.   .+.++.++.+|++|+++++++++.+.+.++++|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 333333222   24568899999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||....  .+..+.+.+++++.+++|+.+++.+++.+.+++.+.+.++++++||.++..+.+++..|+.+|++++.+
T Consensus        81 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~  158 (239)
T TIGR01830        81 VNNAGITRD--NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGF  158 (239)
T ss_pred             EECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHH
Confidence            999997653  355667889999999999999999999999998766678999999998888888999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEee
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~  241 (302)
                      ++.++.++...|+++++++||++.|++....  .......+....+  .+++.+++|+++.+++++.+...+.+|+++++
T Consensus       159 ~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~  234 (239)
T TIGR01830       159 TKSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIP--LGRFGTPEEVANAVAFLASDEASYITGQVIHV  234 (239)
T ss_pred             HHHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCC--cCCCcCHHHHHHHHHHHhCcccCCcCCCEEEe
Confidence            9999999988899999999999998865432  2233333333322  36688999999999999987777889999999


Q ss_pred             CCCcc
Q 044670          242 DGGFS  246 (302)
Q Consensus       242 ~gG~~  246 (302)
                      ++|++
T Consensus       235 ~~g~~  239 (239)
T TIGR01830       235 DGGMY  239 (239)
T ss_pred             CCCcC
Confidence            99863

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=1.1e-33  Score=241.99  Aligned_cols=222  Identities=22%  Similarity=0.228  Sum_probs=180.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      |+++||||++|||++++++|+++|  +.|+...|+....     ....++.++++|++++++++++    .++++++|+|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-----~~~~~~~~~~~Dls~~~~~~~~----~~~~~~id~l   71 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-----FQHDNVQWHALDVTDEAEIKQL----SEQFTQLDWL   71 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-----cccCceEEEEecCCCHHHHHHH----HHhcCCCCEE
Confidence            579999999999999999999985  5666666654321     1124678899999999997774    4556789999


Q ss_pred             EEcccCCCCC----CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc---CCCCChhHHHH
Q 044670           82 YNNAGIVDRG----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI---AGIGSPAYTVS  154 (302)
Q Consensus        82 v~~Ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~---~~~~~~~Y~~s  154 (302)
                      |||||.....    ..++.+.+.+.|++.+++|+.+++.+++.++|.|.+++.++++++||..+..   +.+++..|++|
T Consensus        72 i~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~as  151 (235)
T PRK09009         72 INCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRAS  151 (235)
T ss_pred             EECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhh
Confidence            9999987531    1356677889999999999999999999999999877678999998865432   34567899999


Q ss_pred             HHHHHHHHHHHHHHHCC--CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          155 KYGIIALVKILAAELRQ--YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      |++++.|++.++.|+.+  .+|+|++|+||++.|++.....          ... + .++..+|+|+|+.+++++++...
T Consensus       152 K~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~-~-~~~~~~~~~~a~~~~~l~~~~~~  219 (235)
T PRK09009        152 KAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ----------QNV-P-KGKLFTPEYVAQCLLGIIANATP  219 (235)
T ss_pred             HHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh----------hcc-c-cCCCCCHHHHHHHHHHHHHcCCh
Confidence            99999999999999976  5999999999999999864311          111 2 25578999999999999998878


Q ss_pred             CccccEEeeCCCcc
Q 044670          233 DVTGLNLVVDGGFS  246 (302)
Q Consensus       233 ~~~G~~~~~~gG~~  246 (302)
                      +.+|+.+.+||+..
T Consensus       220 ~~~g~~~~~~g~~~  233 (235)
T PRK09009        220 AQSGSFLAYDGETL  233 (235)
T ss_pred             hhCCcEEeeCCcCC
Confidence            89999999999864

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=3.3e-33  Score=246.25  Aligned_cols=224  Identities=29%  Similarity=0.418  Sum_probs=185.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+.....+   +.++.++.+|++|.++++++++.+.+.+++
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999877766655544   346788999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC------CEEEEEcCcccccCCCCChhH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK------GCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.|+++++++++|.|.++..      ++||++||.++..+.++...|
T Consensus        84 id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y  161 (287)
T PRK06194         84 VHLLFNNAGVGAG--GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIY  161 (287)
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcch
Confidence            9999999998764  46677889999999999999999999999999876544      799999999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCH-------------HHHHHHHHhccccCCCCCCH
Q 044670          152 TVSKYGIIALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINP-------------AILEAFLSEMGNLRGQVLNA  216 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~  216 (302)
                      ++||++++.+++.++.++.  ..+|++++++||++.|++.......+             ............  ....++
T Consensus       162 ~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~  239 (287)
T PRK06194        162 NVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG--SGKVTA  239 (287)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh--ccCCCH
Confidence            9999999999999999987  35799999999999998764321100             111111111111  124799


Q ss_pred             HHHHHHHHHhcc
Q 044670          217 EGIANAALYLAT  228 (302)
Q Consensus       217 ~dva~~~~~l~s  228 (302)
                      +|+|+.++.++.
T Consensus       240 ~dva~~i~~~~~  251 (287)
T PRK06194        240 EEVAQLVFDAIR  251 (287)
T ss_pred             HHHHHHHHHHHH
Confidence            999999998774

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-34  Score=246.31  Aligned_cols=231  Identities=25%  Similarity=0.272  Sum_probs=183.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||+||||++++++|+++|++|++++|+.+ ..+.+...+   +.++.++.+|++|++++.++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998754 333333322   45678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-----cCCCCChhH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-----IAGIGSPAY  151 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-----~~~~~~~~Y  151 (302)
                      ++|++|||||....     ..   .+++..+++|+.+++++++++.+.|.+  .+++|++||..+.     .+.+.+..|
T Consensus        84 ~~d~vi~~ag~~~~-----~~---~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y  153 (248)
T PRK07806         84 GLDALVLNASGGME-----SG---MDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPV  153 (248)
T ss_pred             CCcEEEECCCCCCC-----CC---CCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHH
Confidence            99999999986421     11   124678899999999999999999853  4799999996543     223446789


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.||++++.+++.++.|++++||+|++|.||++.|++.....  ..+.....   . ..+.+++++|+|+|++++++++ 
T Consensus       154 ~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~dva~~~~~l~~-  228 (248)
T PRK07806        154 ARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA---R-REAAGKLYTVSEFAAEVARAVT-  228 (248)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH---H-HhhhcccCCHHHHHHHHHHHhh-
Confidence            999999999999999999999999999999999988654321  11222111   1 1223789999999999999997 


Q ss_pred             CCCCccccEEeeCCCccc
Q 044670          230 EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~  247 (302)
                       ..+++|++++++||...
T Consensus       229 -~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        229 -APVPSGHIEYVGGADYF  245 (248)
T ss_pred             -ccccCccEEEecCccce
Confidence             45679999999999654

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-33  Score=241.85  Aligned_cols=218  Identities=29%  Similarity=0.371  Sum_probs=187.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHH-cCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAK-YGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~id~l   81 (302)
                      |++||||||||||++++++|+++|++|++++|+.+..+++....+ .++.++.+|++|.+++.++++.+.+. ++++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            789999999999999999999999999999999888777766553 57889999999999999999988776 7899999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||....  .++.+.+.+++++++++|+.+++.+++++.++|..++.++||++||..+..+.++...|+.||++++.+
T Consensus        82 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~  159 (260)
T PRK08267         82 FNNAGILRG--GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL  159 (260)
T ss_pred             EECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence            999998654  467778899999999999999999999999999877789999999999999889999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +++++.++.++||++++|+||++.|++.....  ...........    +...+++|++++++.++..
T Consensus       160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~----~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        160 TEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTKRL----GVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHhhc----cCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999876411  11111111111    3357899999999998843

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=7.5e-33  Score=239.19  Aligned_cols=238  Identities=36%  Similarity=0.520  Sum_probs=196.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHHhC----CCeEEEEecCCC-HHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKLG----EDVCYIHCDVTS-EDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~~Dl~~-~~~v~~~~~~~~~   73 (302)
                      +++|+++||||++|||++++++|+++|++|+++.|+...  .+.+.+...    ....+..+|+++ +++++.+++.+.+
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999988887664  344444333    467888899998 9999999999999


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC-hhHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-PAYT  152 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~  152 (302)
                      .+|++|++|||||..... .++.+.+.++|++++++|+.+++.+++.+.|.+.++   +||++||..+. +.++. .+|+
T Consensus        83 ~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~  157 (251)
T COG1028          83 EFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYA  157 (251)
T ss_pred             HcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHH
Confidence            999999999999987531 267888889999999999999999999888888733   99999999998 77774 9999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHH-HHHHHHHhccccCCCCCCHHHHHHHHHHhccCC-
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA-ILEAFLSEMGNLRGQVLNAEGIANAALYLATDE-  230 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-  230 (302)
                      +||+|+++|++.++.|+.++||++++|+||++.|++......... .........  +.+++..|++++..+.++.+.. 
T Consensus       158 ~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  235 (251)
T COG1028         158 ASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARI--PLGRLGTPEEVAAAVAFLASDEA  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCcch
Confidence            999999999999999999999999999999999998875432210 011111111  2247889999999999888653 


Q ss_pred             CCCccccEEeeCCCc
Q 044670          231 ASDVTGLNLVVDGGF  245 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~  245 (302)
                      ..+++|+.+.+|||.
T Consensus       236 ~~~~~g~~~~~~~~~  250 (251)
T COG1028         236 ASYITGQTLPVDGGL  250 (251)
T ss_pred             hccccCCEEEeCCCC
Confidence            567889988888875

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-33  Score=242.69  Aligned_cols=211  Identities=23%  Similarity=0.294  Sum_probs=176.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccH-HHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNL-GQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~-~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|+++||||++|||++++++|+++| ++|++++|+.+. .+++.+++   + .+++++.+|++|++++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999995 999999998875 55554443   2 3688999999999999999999886 5


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|++|||+|.....  .....+.++..+++++|+.+++.+++.++|.|.+++.++||++||.++..+.++...|++||
T Consensus        86 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sK  163 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA--EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTK  163 (253)
T ss_pred             CCCCEEEEeeecCCch--hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHH
Confidence            8999999999985421  11112345566789999999999999999999888789999999998877778888999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.+|++.++.|+.++||+|++|+||++.|++......             .  ....+++|+|+.++..+.+.
T Consensus       164 aa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~--~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        164 AGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------A--PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------C--CCCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999987653210             1  22579999999999988643

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.4e-33  Score=225.09  Aligned_cols=186  Identities=24%  Similarity=0.293  Sum_probs=169.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|.|+|||||++|||++++++|.+.|.+|++++|+++++++...+. ..+..+.||+.|.++.+++++++.++|+.+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~-p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADRDSRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC-cchheeeecccchhhHHHHHHHHHhhCCchhe
Confidence            46889999999999999999999999999999999999999887766 45777899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+....--.-.+...++.++.+++|+++|..++..++|++.+++.+.||++||..+..|....+.||++|+|+..
T Consensus        82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHs  161 (245)
T COG3967          82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHS  161 (245)
T ss_pred             eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHH
Confidence            99999997642111233456778899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSG  187 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~  187 (302)
                      ++.+|+.++...+|.|.-+.|..|.|+
T Consensus       162 yt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         162 YTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHhhhcceEEEEecCCceecC
Confidence            999999999988999999999999997

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-33  Score=237.33  Aligned_cols=216  Identities=26%  Similarity=0.433  Sum_probs=187.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++++++||||+++||++++++|+++|++|++++|+.+..+...+.+   +.++.++.+|++++++++++++++.+++++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999999999999999999999999999999887665544333   456888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.+++++.+++|+.+++++++.+.+.+.+++.+++|++||..+..+.++...|+.||++
T Consensus        85 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  162 (239)
T PRK07666         85 IDILINNAGISKF--GKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFG  162 (239)
T ss_pred             ccEEEEcCccccC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHH
Confidence            9999999997643  45667788999999999999999999999999987778999999999999888889999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++.+++.++.|+.++||++++|+||++.|++.......         . ..+ ..+.+++|+|+.++.+++.
T Consensus       163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---------~-~~~-~~~~~~~~~a~~~~~~l~~  223 (239)
T PRK07666        163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---------D-GNP-DKVMQPEDLAEFIVAQLKL  223 (239)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---------c-cCC-CCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999999875432110         0 011 4478999999999999864

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-33  Score=240.28  Aligned_cols=217  Identities=24%  Similarity=0.344  Sum_probs=186.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++++++||||++|||.+++++|+++|++|++++|+.+..+.+..++  +.++.++.+|++|+++++++++.+.+ ++++
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~i   81 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGI   81 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCC
Confidence            46899999999999999999999999999999999987776665543  45788999999999999999998876 7899


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |++|||||....  .++.+.+.+++++++++|+.|++++++.+.++|.+++.++||++||..+..+.++...|+.||+++
T Consensus        82 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  159 (263)
T PRK09072         82 NVLINNAGVNHF--ALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFAL  159 (263)
T ss_pred             CEEEECCCCCCc--cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHH
Confidence            999999997653  467778899999999999999999999999999877678999999999888888999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.+++.++.++.++||+|++|+||++.|++.....      ......   +..+..+++|+|+.++++++.
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~------~~~~~~---~~~~~~~~~~va~~i~~~~~~  221 (263)
T PRK09072        160 RGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV------QALNRA---LGNAMDDPEDVAAAVLQAIEK  221 (263)
T ss_pred             HHHHHHHHHHhcccCcEEEEEecCcccccchhhhc------cccccc---ccCCCCCHHHHHHHHHHHHhC
Confidence            99999999999999999999999999998753211      000111   113467999999999999964

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=239.39  Aligned_cols=220  Identities=24%  Similarity=0.265  Sum_probs=182.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||+||||++++++|+++|++|++++|+.+..+.+..   ..+.++.+|++++++++++++++.+.++++|++||
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA---AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            789999999999999999999999999999998876655433   34678899999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||....  .+..+.+.+++++.+++|+.|++.+++.++|.|.+ ..++||++||.++..+.+....|++||++++.+++
T Consensus        79 ~ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~  155 (274)
T PRK05693         79 NAGYGAM--GPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSD  155 (274)
T ss_pred             CCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccccCCCCCccHHHHHHHHHHHHHH
Confidence            9997653  46777889999999999999999999999999865 35899999999998888889999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH-----------HHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINP-----------AILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +++.|+.++||+|++|+||+|.|++........           ...+.+............+++++|+.++..+..
T Consensus       156 ~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        156 ALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            999999999999999999999999765422110           011111111101112356899999999888753

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=1.7e-32  Score=222.72  Aligned_cols=245  Identities=27%  Similarity=0.288  Sum_probs=207.9

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++||+|-  ...|+..||+.|.++|+++.++..++.   +.+++.+.++. ..+++||+++.++++++++++.+++
T Consensus         4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s-~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGS-DLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccC-CeEEecCCCCHHHHHHHHHHHHHhh
Confidence            68999999997  478999999999999999999987663   33444444433 4678999999999999999999999


Q ss_pred             CCccEEEEcccCCCC--CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|.|||+.++...  -...+.+.+.|+|...+++...+...+.+++.|.|.  .+|.|+-.+-.++.+..|++...+.
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLtYlgs~r~vPnYNvMGv  160 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVMGV  160 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEEeccceeecCCCchhHH
Confidence            999999999998752  124677789999999999999999999999999994  4789999999989899999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      +|+++|.-+|.+|.+++++|||||+|+-|++.|=....-.....+++. .... .|+++.++.|||+++.+||+|+-++.
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~-~e~~-aPl~r~vt~eeVG~tA~fLlSdLssg  238 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKE-NEAN-APLRRNVTIEEVGNTAAFLLSDLSSG  238 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHH-HHhh-CCccCCCCHHHhhhhHHHHhcchhcc
Confidence            999999999999999999999999999999998655443222233333 2232 34489999999999999999999999


Q ss_pred             ccccEEeeCCCcccCCC
Q 044670          234 VTGLNLVVDGGFSVANP  250 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~  250 (302)
                      +|||++.||+|+.+...
T Consensus       239 iTGei~yVD~G~~i~~m  255 (259)
T COG0623         239 ITGEIIYVDSGYHIMGM  255 (259)
T ss_pred             cccceEEEcCCceeecc
Confidence            99999999999987543

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-32  Score=234.59  Aligned_cols=210  Identities=22%  Similarity=0.265  Sum_probs=183.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++...+     +.++.++.+|++|++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999987766654433     346888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC-ChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG-SPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~-~~~Y~~sK~  156 (302)
                      +|++|||||+...  .+..+.+.+.+++.+++|+.+++.+++.+.+.|.+.+.++||++||..+..+.++ ...|+.||+
T Consensus        82 id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  159 (248)
T PRK08251         82 LDRVIVNAGIGKG--ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKA  159 (248)
T ss_pred             CCEEEECCCcCCC--CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHH
Confidence            9999999998654  4566677889999999999999999999999998777889999999888877774 688999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +++.+++.++.++...+|++++|+||++.|++......             .  ...++++++++.++..+..
T Consensus       160 a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~--~~~~~~~~~a~~i~~~~~~  217 (248)
T PRK08251        160 GVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------T--PFMVDTETGVKALVKAIEK  217 (248)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------C--CccCCHHHHHHHHHHHHhc
Confidence            99999999999999889999999999999987654321             0  2367899999999888754

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.1e-33  Score=229.44  Aligned_cols=227  Identities=29%  Similarity=0.393  Sum_probs=190.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH--h--CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK--L--GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||.+++||+.||||++++++|+++|..+.++.-+.+..+...+.  .  ...+.|++||+++.+++++.++++..++|
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            4799999999999999999999999999988776666555443332  2  25688999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCCChhHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      .+|++||+||+..          ..+|++++.+|+.|..+-+..++|+|.++.   +|-||++||.++..|.+-.+.|++
T Consensus        83 ~iDIlINgAGi~~----------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~A  152 (261)
T KOG4169|consen   83 TIDILINGAGILD----------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAA  152 (261)
T ss_pred             ceEEEEccccccc----------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhh
Confidence            9999999999854          357999999999999999999999998753   678999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH--HCCCCcEEEEEeCCcccCCcccCCC------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHH
Q 044670          154 SKYGIIALVKILAAE--LRQYGLRVNCVSPYGLVSGISSRNS------INPAILEAFLSEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       154 sK~a~~~~~~~la~e--~~~~gi~v~~v~PG~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      ||+++..|+|+++..  |.+.||+++++|||++.|.+.....      ...+.+.+.++..+     ..++.+++...+.
T Consensus       153 sKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~-----~q~~~~~a~~~v~  227 (261)
T KOG4169|consen  153 SKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAP-----KQSPACCAINIVN  227 (261)
T ss_pred             cccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcc-----cCCHHHHHHHHHH
Confidence            999999999998865  4567999999999999998765441      12233444444332     4589999999999


Q ss_pred             hccCCCCCccccEEeeCCCc
Q 044670          226 LATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++.   ..+|+++.+|.|.
T Consensus       228 aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  228 AIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHhh---ccCCcEEEEecCc
Confidence            9865   3589999999995

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.1e-32  Score=232.08  Aligned_cols=232  Identities=26%  Similarity=0.355  Sum_probs=192.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|+++||||+|+||.++++.|+++|++|++++|+++..+.+.+.+.  .+++++.+|++++++++++++++...++++
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            468999999999999999999999999999999999877766544432  367889999999999999999998888899


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~a  157 (302)
                      |.+|||+|....  .+..  ..++++.++++|+.+++.+++.++|.+.+  .+++|++||..+. .+.+....|+.||++
T Consensus        83 d~ii~~ag~~~~--~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~  156 (238)
T PRK05786         83 DGLVVTVGGYVE--DTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAG  156 (238)
T ss_pred             CEEEEcCCCcCC--CchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHH
Confidence            999999986542  2222  33789999999999999999999999853  4789999998764 355677889999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.++.+.||++++|+||+++|++...     ....    ..........+++|++++++++++++....+|+
T Consensus       157 ~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~-----~~~~----~~~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~  227 (238)
T PRK05786        157 LAKAVEILASELLGRGIRVNGIAPTTISGDFEPE-----RNWK----KLRKLGDDMAPPEDFAKVIIWLLTDEADWVDGV  227 (238)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch-----hhhh----hhccccCCCCCHHHHHHHHHHHhcccccCccCC
Confidence            9999999999998889999999999999986421     1111    111211346799999999999998877788999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .+.+|||..+
T Consensus       228 ~~~~~~~~~~  237 (238)
T PRK05786        228 VIPVDGGARL  237 (238)
T ss_pred             EEEECCcccc
Confidence            9999998654

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-32  Score=232.44  Aligned_cols=209  Identities=18%  Similarity=0.146  Sum_probs=180.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|+++||||++|||++++++|+++|++|++++|+.+..+...+.+    +.+++++.+|++|+++++++++++.+   ++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            378999999999999999999999999999999987766554433    35788999999999999999988755   47


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |++|||||....  .+..+.+.+++.+++++|+.+++++++.+.+.|.+++.+++|++||..+..+.++...|+.||+++
T Consensus        78 d~vv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  155 (243)
T PRK07102         78 DIVLIAVGTLGD--QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAAL  155 (243)
T ss_pred             CEEEECCcCCCC--cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHH
Confidence            999999997654  466677889999999999999999999999999877789999999998888888889999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++++.++.|+.+.||++++|+||+++|++.....              .+.....+++++++.++.+++..
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~--------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK--------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcccChhhhccC--------------CCccccCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999998654321              01134679999999999988643

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-31  Score=233.29  Aligned_cols=221  Identities=28%  Similarity=0.351  Sum_probs=184.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++++|||||+||||+++++.|+++|++|++++|+....+.+.+.+   +.++.++.+|++|++++.++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            578999999999999999999999999999999877666554433   45688899999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCC-CHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDT-PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||||....  .++.+. +.+++++.+++|+.+++++++.+.+.|.+. .+++|++||..+..+.+++..|+.||+++
T Consensus        81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~  157 (263)
T PRK06181         81 ILVNNAGITMW--SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHAL  157 (263)
T ss_pred             EEEECCCcccc--cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHH
Confidence            99999997654  356666 888999999999999999999999988654 58999999998888888899999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.+++.++.++.+++|++++++||++.|++..........   .....+....++++++|+|++++++++.
T Consensus       158 ~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~dva~~i~~~~~~  225 (263)
T PRK06181        158 HGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGK---PLGKSPMQESKIMSAEECAEAILPAIAR  225 (263)
T ss_pred             HHHHHHHHHHhhhcCceEEEEecCccccCcchhhcccccc---ccccccccccCCCCHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999976533211000   0000111114689999999999999964

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=7e-32  Score=218.88  Aligned_cols=224  Identities=22%  Similarity=0.277  Sum_probs=181.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-cCCEEEE-EecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH-
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE-NGAKVVI-ADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK-   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   74 (302)
                      |+.|.++||||++|||..++++|+. .|-.+++ +.|+.+++.+..+..   ..+++.+++|+++.++++.+++++.+- 
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV   80 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV   80 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence            6778999999999999999999997 4566554 566677643333332   578999999999999999999999987 


Q ss_pred             -cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC-----------CEEEEEcCcccc
Q 044670           75 -YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK-----------GCILFTASACTE  142 (302)
Q Consensus        75 -~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-----------~~iv~~sS~~~~  142 (302)
                       ...+|.|+||||+... +....+.+.+.|.+.+++|..|+..++|+++|.+++...           ..|||+||.++.
T Consensus        81 g~~GlnlLinNaGi~~~-y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   81 GSDGLNLLINNAGIALS-YNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             ccCCceEEEeccceeee-cccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence             4579999999999764 456666778899999999999999999999999976532           389999987665


Q ss_pred             cC---CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHH
Q 044670          143 IA---GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGI  219 (302)
Q Consensus       143 ~~---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  219 (302)
                      .+   ..++.+|.+||+|+++|+|+++.|+.+.+|-|..+|||||.|.|...                   ...+++||-
T Consensus       160 ~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-------------------~a~ltveeS  220 (249)
T KOG1611|consen  160 IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-------------------KAALTVEES  220 (249)
T ss_pred             cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-------------------Ccccchhhh
Confidence            43   23568999999999999999999999999999999999999999863                   235678888


Q ss_pred             HHHHHHhccCCCCCccccEEeeCCC
Q 044670          220 ANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       220 a~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                      +..++.....-...-+|..|+.|+-
T Consensus       221 ts~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  221 TSKLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             HHHHHHHHHhcCcccCcceEccCCC
Confidence            8777776654444446777777663

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-32  Score=225.71  Aligned_cols=198  Identities=21%  Similarity=0.227  Sum_probs=168.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++||||++|||++++++|+++ ++|++++|+..              .+.+|++|++++++++++    ++++|++||
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------~~~~D~~~~~~~~~~~~~----~~~id~lv~   61 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------DVQVDITDPASIRALFEK----VGKVDAVVS   61 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------ceEecCCChHHHHHHHHh----cCCCCEEEE
Confidence            37999999999999999999999 99999998753              368999999998888764    478999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||....  .++.+.+.++|++.+++|+.+++++++.+.|.|.+  .++|+++||..+..+.+++..|++||+++++|++
T Consensus        62 ~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~  137 (199)
T PRK07578         62 AAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGFVK  137 (199)
T ss_pred             CCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHH
Confidence            9997543  56777889999999999999999999999999964  4789999999998888999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEee
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~  241 (302)
                      .++.|+ ++||+||+|+||++.|++....        .   ..+.  ....+++|+|+.++.+++.   ..+|+.+.+
T Consensus       138 ~la~e~-~~gi~v~~i~Pg~v~t~~~~~~--------~---~~~~--~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        138 AAALEL-PRGIRINVVSPTVLTESLEKYG--------P---FFPG--FEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHHc-cCCeEEEEEcCCcccCchhhhh--------h---cCCC--CCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            999999 8899999999999998763211        0   0111  3467999999999988853   468888764

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-31  Score=225.75  Aligned_cols=222  Identities=29%  Similarity=0.411  Sum_probs=188.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.+++++||||+|+||++++++|+++|++|++++|+++....+.+.+.  .+++++.+|+++++++.++++++.+.++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            357999999999999999999999999999999998877766655553  568889999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+|||++|....  .++.+.+.+++++++++|+.+++++++++++.+ +++.++||++||.++..+..+...|+.||+++
T Consensus        84 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~  160 (237)
T PRK07326         84 DVLIANAGVGHF--APVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGTNFFAGGAAYNASKFGL  160 (237)
T ss_pred             CEEEECCCCCCC--CchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhccCCCCCchHHHHHHHH
Confidence            999999997653  466778899999999999999999999999988 34568999999998888888888999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.++.+.|+++++|+||++.|++......  .       ..    ....+++|+++.++++++.....+.+++
T Consensus       161 ~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~--~-------~~----~~~~~~~d~a~~~~~~l~~~~~~~~~~~  227 (237)
T PRK07326        161 VGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS--E-------KD----AWKIQPEDIAQLVLDLLKMPPRTLPSKI  227 (237)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeccccCcccccccc--h-------hh----hccCCHHHHHHHHHHHHhCCccccccce
Confidence            999999999999899999999999999986543211  0       00    1246899999999999987665554444

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-31  Score=230.26  Aligned_cols=220  Identities=20%  Similarity=0.281  Sum_probs=177.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHH-HHHHc---CCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDT-AVAKY---GKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~-~~~~~---~~id   79 (302)
                      +++|||||+||||++++++|+++|++|++++|+....  .....+.++.++.+|++|++++++++++ +.+.+   +++|
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV   79 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence            4799999999999999999999999999999976542  2223345788899999999999998877 55544   4799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++|||||.... ..+..+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.+++..|+.+|++++
T Consensus        80 ~~v~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (243)
T PRK07023         80 LLINNAGTVEP-IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALD  158 (243)
T ss_pred             EEEEcCcccCC-CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHH
Confidence            99999997643 13566778999999999999999999999999998777789999999999989899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-C---HHHHHHHHHhccccCCCCCCHHHHHHH-HHHhccC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-N---PAILEAFLSEMGNLRGQVLNAEGIANA-ALYLATD  229 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~dva~~-~~~l~s~  229 (302)
                      .+++.++.+ .+.||++++|+||++.|++...... .   ......+.. ..+ .++..+|+|+|+. +.++.++
T Consensus       159 ~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~va~~~~~~l~~~  230 (243)
T PRK07023        159 HHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRE-LKA-SGALSTPEDAARRLIAYLLSD  230 (243)
T ss_pred             HHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHH-hhh-cCCCCCHHHHHHHHHHHHhcc
Confidence            999999999 7789999999999999987532110 0   011112222 122 3678999999994 5566554

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-31  Score=228.12  Aligned_cols=205  Identities=19%  Similarity=0.194  Sum_probs=173.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .++++||||+||||++++++|+++|++|++++|++++.+++.+. ..++.++.+|++|+++++++++++..   .+|.+|
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i   76 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-SANIFTLAFDVTDHPGTKAALSQLPF---IPELWI   76 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEEE
Confidence            37899999999999999999999999999999998776665443 24678899999999999998887642   479999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV  162 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (302)
                      ||||....  .+....+.++|++++++|+.+++++++.+.|+|.+  .+++|++||.++..+.++...|++||++++.++
T Consensus        77 ~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~  152 (240)
T PRK06101         77 FNAGDCEY--MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYFA  152 (240)
T ss_pred             EcCccccc--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHHH
Confidence            99986432  23445788999999999999999999999999843  478999999999988889999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       163 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.++.|+.++||++++++||++.|++......            ..  ....+++++++.++..+..
T Consensus       153 ~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~------------~~--~~~~~~~~~a~~i~~~i~~  205 (240)
T PRK06101        153 RTLQLDLRPKGIEVVTVFPGFVATPLTDKNTF------------AM--PMIITVEQASQEIRAQLAR  205 (240)
T ss_pred             HHHHHHHHhcCceEEEEeCCcCCCCCcCCCCC------------CC--CcccCHHHHHHHHHHHHhc
Confidence            99999999999999999999999998654210            01  2256899999999887754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=1.1e-31  Score=228.50  Aligned_cols=188  Identities=24%  Similarity=0.297  Sum_probs=174.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcC--C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYG--K   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~   77 (302)
                      +++|.|+|||+-+|+|+.+|++|.++|++|++.+-+++..+.+..+. .++...+.+|++++++|+++.+.+.++.+  +
T Consensus        27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g  106 (322)
T KOG1610|consen   27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG  106 (322)
T ss_pred             cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence            36899999999999999999999999999999998888888888777 78889999999999999999999988753  5


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +..||||||+... +.+.+-.+.+++++++++|++|+..++++++|.++++ .||||++||..+..+.|...+|++||+|
T Consensus       107 LwglVNNAGi~~~-~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~a  184 (322)
T KOG1610|consen  107 LWGLVNNAGISGF-LGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFA  184 (322)
T ss_pred             ceeEEeccccccc-cCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHH
Confidence            9999999997653 3678888999999999999999999999999999765 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISS  190 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  190 (302)
                      ++.|+.++++|+.++||+|.+|.||+..|+...
T Consensus       185 Veaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  185 VEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            999999999999999999999999999998875

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-31  Score=259.73  Aligned_cols=214  Identities=25%  Similarity=0.286  Sum_probs=184.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||+++|||||+|||++++++|+++|++|++++|+++..+++.+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999988777665544   457889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCC--CHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDT--PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +|++|||||....  ....+.  ..+++++++++|+.+++.+++.++|.|.+++.++||++||.++..+.++...|++||
T Consensus       449 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  526 (657)
T PRK07201        449 VDYLVNNAGRSIR--RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK  526 (657)
T ss_pred             CCEEEECCCCCCC--CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHH
Confidence            9999999997543  122222  257899999999999999999999999888789999999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++++.+++.++.|+.++||+|++|+||+|.|++......           ...  ....+|+++|+.++..+..
T Consensus       527 ~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~--~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        527 AALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNN--VPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccC--CCCCCHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999998753210           001  2367899999999887653

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=1.3e-31  Score=214.87  Aligned_cols=185  Identities=28%  Similarity=0.351  Sum_probs=167.6

Q ss_pred             CCCEEEEeCCC-ChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH-HcCCcc
Q 044670            2 EGKVAIITGGA-SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVA-KYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~id   79 (302)
                      +.|.|+|||++ ||||.++++.|+++|+.|+.+.|+.+.-..+....  .+....+|++++++|..+..++.+ .+|++|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~--gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF--GLKPYKLDVSKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh--CCeeEEeccCChHHHHHHHHHHhhCCCCceE
Confidence            35789999875 88999999999999999999999988777765443  478889999999999999999988 789999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +|+||||..-.  .|..+.+.++.++.|++|+.|+..+++++...+.+ ..|.||+++|.++..+.+..+.|++||+|+.
T Consensus        84 ~L~NNAG~~C~--~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAih  160 (289)
T KOG1209|consen   84 LLYNNAGQSCT--FPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIH  160 (289)
T ss_pred             EEEcCCCCCcc--cccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHH
Confidence            99999997644  47888999999999999999999999999977664 5799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSR  191 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  191 (302)
                      .+++.|+.|+++.||+|..+.||.|.|.....
T Consensus       161 ay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  161 AYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HhhhhcEEeeeccccEEEEecccceecccccC
Confidence            99999999999999999999999999987654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.98  E-value=4.7e-31  Score=226.85  Aligned_cols=203  Identities=25%  Similarity=0.298  Sum_probs=165.5

Q ss_pred             HHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCC
Q 044670           19 AAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDT   98 (302)
Q Consensus        19 ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~   98 (302)
                      ++++|+++|++|++++|+.+..+.        ..++.+|++|.++++++++++.   +++|+||||||....        
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~--------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT--------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC--------
Confidence            478999999999999998765421        2467899999999999988764   589999999996421        


Q ss_pred             CHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc---------------------------CCCCChhH
Q 044670           99 PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI---------------------------AGIGSPAY  151 (302)
Q Consensus        99 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~---------------------------~~~~~~~Y  151 (302)
                        +++++++++|+.+++++++.++|+|.+  .++||++||.++..                           +.++...|
T Consensus        62 --~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 --APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             --CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence              247899999999999999999999854  48999999988762                           45677899


Q ss_pred             HHHHHHHHHHHHHHH-HHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          152 TVSKYGIIALVKILA-AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       152 ~~sK~a~~~~~~~la-~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++||++++++++.++ .|++++||+||+|+||++.|++.......  ...........+.+++.+|+|+|++++|++++.
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~  215 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSM--LGQERVDSDAKRMGRPATADEQAAVLVFLCSDA  215 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhh--hhhHhhhhcccccCCCCCHHHHHHHHHHHcChh
Confidence            999999999999999 99999999999999999999987543211  001111111223477899999999999999988


Q ss_pred             CCCccccEEeeCCCcc
Q 044670          231 ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~  246 (302)
                      ..+++|+.+.+|||..
T Consensus       216 ~~~~~G~~i~vdgg~~  231 (241)
T PRK12428        216 ARWINGVNLPVDGGLA  231 (241)
T ss_pred             hcCccCcEEEecCchH
Confidence            8899999999999965

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4e-30  Score=218.75  Aligned_cols=203  Identities=20%  Similarity=0.277  Sum_probs=167.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |+++||||++|||++++++|+++|++|++++|+.+..+.+.+ . .++.++.+|++|+++++++++++.+  +++|+|||
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c-cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEEE
Confidence            789999999999999999999999999999999876655432 2 3567889999999999999988754  47999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC---CCChhHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG---IGSPAYTVSKYGIIA  160 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~a~~~  160 (302)
                      |||.......+..+.+.+++++.+++|+.+++.+++.+++.+.. +.++++++||..+..+.   .++..|++||++++.
T Consensus        78 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~  156 (225)
T PRK08177         78 NAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS  156 (225)
T ss_pred             cCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCccccccCCCCCccchHHHHHHHHH
Confidence            99986543346677889999999999999999999999999864 35789999987665432   356789999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.++.|+.++||++|+|+||++.|++.....                   ..++++.++.++..+...
T Consensus       157 ~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~~-------------------~~~~~~~~~~~~~~~~~~  207 (225)
T PRK08177        157 MTRSFVAELGEPTLTVLSMHPGWVKTDMGGDNA-------------------PLDVETSVKGLVEQIEAA  207 (225)
T ss_pred             HHHHHHHHhhcCCeEEEEEcCCceecCCCCCCC-------------------CCCHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999864321                   235666666666666443

>PRK08264 short chain dehydrogenase; Validated

Probab=99.97  E-value=8e-30  Score=218.55  Aligned_cols=203  Identities=25%  Similarity=0.286  Sum_probs=174.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.+++++||||+|+||++++++|+++|+ +|++++|+.++..+    .+.++.++.+|++|++++.++++.    ++++|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~----~~~id   75 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA----ASDVT   75 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh----cCCCC
Confidence            3689999999999999999999999999 99999998776544    345788999999999998776664    46799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ++||+||.... ..++.+.+.+++++.+++|+.+++.+++++.+.+.+.+.+++|++||..+..+.+++..|+.+|++++
T Consensus        76 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~  154 (238)
T PRK08264         76 ILVNNAGIFRT-GSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAW  154 (238)
T ss_pred             EEEECCCcCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHH
Confidence            99999998332 14677788999999999999999999999999998777899999999999888889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .+++.++.++.+.|+++++++||.++|++.....                 +...+++++++.++..+..
T Consensus       155 ~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~-----------------~~~~~~~~~a~~~~~~~~~  207 (238)
T PRK08264        155 SLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD-----------------APKASPADVARQILDALEA  207 (238)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeCCcccccccccCC-----------------cCCCCHHHHHHHHHHHHhC
Confidence            9999999999989999999999999998754221                 2256788888888777643

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1e-29  Score=220.17  Aligned_cols=222  Identities=22%  Similarity=0.254  Sum_probs=181.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDIM   81 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~l   81 (302)
                      .|+++||||+|+||.++++.|+++|++|++++|+.++.+.+.+   ..++.+.+|++|.+++.++++.+.+.. +++|.+
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~i   78 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS---LGFTGILLDLDDPESVERAADEVIALTDNRLYGL   78 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh---CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            3789999999999999999999999999999998877655433   246788999999999999999887754 689999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||+|....  .+..+.+.+++++.+++|+.|++++++.+++.+.+.+.++||++||..+..+.++...|+.||++++.+
T Consensus        79 i~~ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~  156 (256)
T PRK08017         79 FNNAGFGVY--GPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW  156 (256)
T ss_pred             EECCCCCCc--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence            999997553  466678899999999999999999999999999877778999999998888888899999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +++++.++.++++++++++||.+.|++........... ..... ....+.+.+++|+++.+..+++...
T Consensus       157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~d~a~~~~~~~~~~~  224 (256)
T PRK08017        157 SDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDK-PVENP-GIAARFTLGPEAVVPKLRHALESPK  224 (256)
T ss_pred             HHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhcc-chhhh-HHHhhcCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999998765422111000 00000 0000336899999999999986544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=3.1e-30  Score=219.21  Aligned_cols=218  Identities=26%  Similarity=0.330  Sum_probs=192.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-----EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.++|||||+|||++++..+..+|++|.++.|+.+++.++...++     ..+.+..+|+.|-+++..+++++.+..+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            479999999999999999999999999999999999988877763     336789999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |.+|||||..-.  +.+.+.+.++++.++++|++|+++.+++.++.|++.. .|+|+.+||.++..+..++++|++||.|
T Consensus       114 d~l~~cAG~~v~--g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  114 DNLFCCAGVAVP--GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             ceEEEecCcccc--cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            999999999876  5788999999999999999999999999999998765 6799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +.+++..+++|+.++||+|....|+.+.||++.+........-.....    ......+||+|.+++.=+
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g----~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEG----GSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecC----CCCCcCHHHHHHHHHhHH
Confidence            999999999999999999999999999999987764432222222221    244678999999987555

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3e-29  Score=217.36  Aligned_cols=217  Identities=24%  Similarity=0.333  Sum_probs=174.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|++|||||+||||++++++|+++|++|++++|+.+....+.+.   .+..+.++.+|++|++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            67999999999999999999999999999999987665554433   23467889999999999877654      3799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||....  .+..+.+.+++++.+++|+.+++.+++.+++.+.+++.++||++||..+..+.++...|++||++++
T Consensus        76 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~  153 (257)
T PRK09291         76 VLLNNAGIGEA--GAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALE  153 (257)
T ss_pred             EEEECCCcCCC--cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHH
Confidence            99999998754  5777888999999999999999999999999998777789999999988888888899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH-HH---HHHHHH--hccccCCCCCCHHHHHHHHHHhcc
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP-AI---LEAFLS--EMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~---~~~~~~--~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .+++.++.++.+.||++++|+||++.|++........ ..   ...+..  ....+ ....+++++++.++.++.
T Consensus       154 ~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~  227 (257)
T PRK09291        154 AIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP-LEQFDPQEMIDAMVEVIP  227 (257)
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc-ccCCCHHHHHHHHHHHhc
Confidence            9999999999889999999999999988653221100 00   001111  11111 235789999998887764

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=8.4e-30  Score=206.56  Aligned_cols=160  Identities=36%  Similarity=0.545  Sum_probs=145.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC--ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ--DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+++||||++|||++++++|+++|+ +|++++|+  .+..+++...+   +.++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7999999999999999999999965 67888888  55555554443   578899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.++|+++|++|+.+++++.+++.|    ++.++||++||.++..+.+++..|++||+|
T Consensus        81 ld~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaa  154 (167)
T PF00106_consen   81 LDILINNAGIFSD--GSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAA  154 (167)
T ss_dssp             ESEEEEECSCTTS--BSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHH
T ss_pred             ccccccccccccc--cccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHH
Confidence            9999999999874  6888889999999999999999999999999    448999999999999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 044670          158 IIALVKILAAEL  169 (302)
Q Consensus       158 ~~~~~~~la~e~  169 (302)
                      +++|++++++|+
T Consensus       155 l~~~~~~la~e~  166 (167)
T PF00106_consen  155 LRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhc
Confidence            999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.6e-29  Score=211.27  Aligned_cols=214  Identities=16%  Similarity=0.165  Sum_probs=174.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |+++||||+++||++++++|+++|++|++++|+.+..+++..   ..+.++.+|+++.++++++++++..  +++|++||
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA---LGAEALALDVADPASVAGLAWKLDG--EALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh---ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEEE
Confidence            689999999999999999999999999999998776655443   2356889999999999988776632  47999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC---hhHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS---PAYTVSKYGIIA  160 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~---~~Y~~sK~a~~~  160 (302)
                      |+|.......+..+.+.+++++.+++|+.+++++++++.++|.+ ..++++++||..+..+..+.   ..|+.+|++++.
T Consensus        77 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~  155 (222)
T PRK06953         77 VAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSIGDATGTTGWLYRASKAALND  155 (222)
T ss_pred             CCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCcccccccccCCCccccHHhHHHHHH
Confidence            99986432235566789999999999999999999999998865 36789999998766553322   359999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.++.  ++++++|+||+++|++...                   .....+++.+..+..+++......+|..+.
T Consensus       156 ~~~~~~~~~~--~i~v~~v~Pg~i~t~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (222)
T PRK06953        156 ALRAASLQAR--HATCIALHPGWVRTDMGGA-------------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQ  214 (222)
T ss_pred             HHHHHhhhcc--CcEEEEECCCeeecCCCCC-------------------CCCCCHHHHHHHHHHHHHhcCcccCceEEe
Confidence            9999998863  7999999999999998542                   124578999998888776555667888887


Q ss_pred             eCCC
Q 044670          241 VDGG  244 (302)
Q Consensus       241 ~~gG  244 (302)
                      .|++
T Consensus       215 ~~~~  218 (222)
T PRK06953        215 YDGV  218 (222)
T ss_pred             eCCc
Confidence            7765

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=2.9e-30  Score=219.86  Aligned_cols=189  Identities=25%  Similarity=0.287  Sum_probs=168.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++++|||||.|||++.+++||++|.+|++++|++++++.+.+++    +.+++++.+|+++.+.+.+-+.+..+. ..+
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~V  127 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LDV  127 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cce
Confidence            589999999999999999999999999999999999999887776    466899999999988733322222222 257


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      -+||||+|...+.+..+.+.+.+.+++.+.+|..+...+++.++|.|.+++.|-||++||.++..+.|.++.|++||+.+
T Consensus       128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v  207 (312)
T KOG1014|consen  128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFV  207 (312)
T ss_pred             EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHH
Confidence            89999999988655677888888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRN  192 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  192 (302)
                      +.|+++|+.|+..+||.|-++.|++|-|+|....
T Consensus       208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  208 DFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            9999999999999999999999999999987654

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.5e-29  Score=213.35  Aligned_cols=194  Identities=21%  Similarity=0.190  Sum_probs=149.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+........  ......++.+|++|.+++++       .++++|+
T Consensus        12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~-------~~~~iDi   82 (245)
T PRK12367         12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN--DESPNEWIKWECGKEESLDK-------QLASLDV   82 (245)
T ss_pred             hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh--ccCCCeEEEeeCCCHHHHHH-------hcCCCCE
Confidence            57899999999999999999999999999999998863221111  11223578899999988654       3458999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC---CCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|||||...     ..+.+.++|++++++|+.+++++++.++|.|.++   +.+.+++.||.++..+ ++...|++||++
T Consensus        83 lVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaa  156 (245)
T PRK12367         83 LILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRL  156 (245)
T ss_pred             EEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHH
Confidence            999999742     2346789999999999999999999999999753   2334545556555444 456789999999


Q ss_pred             HHHHH---HHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          158 IIALV---KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       158 ~~~~~---~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++.+.   ++++.|+.+.+++|+.+.||++.|++..                    ...++|+++|+.++++++.
T Consensus       157 l~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~--------------------~~~~~~~~vA~~i~~~~~~  211 (245)
T PRK12367        157 IGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP--------------------IGIMSADFVAKQILDQANL  211 (245)
T ss_pred             HHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc--------------------cCCCCHHHHHHHHHHHHhc
Confidence            86543   4555566788999999999999887621                    1257899999999999864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.97  E-value=5.6e-29  Score=215.85  Aligned_cols=268  Identities=16%  Similarity=0.119  Sum_probs=196.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH--HHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA--LACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .+++|+||||||+||++++++|+++||+|+.+.|+++..+.  .+..+   +.+...+.+||+|++++..+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            46899999999999999999999999999999999876433  23333   3568999999999999999998       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-C---------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-I---------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~---------  146 (302)
                      ++|+|+|.|.....       ...+...+++++++.|+.++++++...   ....|||++||.++.... +         
T Consensus        78 gcdgVfH~Asp~~~-------~~~~~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vvd  147 (327)
T KOG1502|consen   78 GCDGVFHTASPVDF-------DLEDPEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVVD  147 (327)
T ss_pred             CCCEEEEeCccCCC-------CCCCcHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCcccc
Confidence            79999999986542       111123479999999999999999984   247899999999887654 1         


Q ss_pred             --CC----------hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHh----cccc
Q 044670          147 --GS----------PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSE----MGNL  209 (302)
Q Consensus       147 --~~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~----~~~~  209 (302)
                        .|          ..|+.||...|..++.++.|   .|+...+|+|+.|.||........ ......++..    .+..
T Consensus       148 E~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~  224 (327)
T KOG1502|consen  148 EESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNF  224 (327)
T ss_pred             cccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCC
Confidence              11          26999999999999999988   589999999999999998873222 2233333332    2222


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC------CCCccccCCCccce---------eeccCCcc-ccc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA------NPSLMKFASPFHLI---------KAIGDGCR-SFL  273 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~------~~~~~~~~~~~~~~---------~~~~~~~~-~~~  273 (302)
                      ...+++++|+|.+++++++.+..  .|+++..+......      ...++.+..+....         ..+-.... ++.
T Consensus       225 ~~~~VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~lg  302 (327)
T KOG1502|consen  225 WLAFVDVRDVALAHVLALEKPSA--KGRYICVGEVVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKSLG  302 (327)
T ss_pred             ceeeEeHHHHHHHHHHHHcCccc--CceEEEecCcccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHhcc
Confidence            23479999999999999976654  58888877766611      11122112111100         11233333 444


Q ss_pred             hhHHHHHHHHHHhhhhcc
Q 044670          274 GISFIAMMCLIHKIQKVI  291 (302)
Q Consensus       274 g~~~~~~~~~~~~~~~~~  291 (302)
                      ++.++++++++.|+++++
T Consensus       303 ~~~~~~l~e~~~dt~~sl  320 (327)
T KOG1502|consen  303 GFKFRPLEETLSDTVESL  320 (327)
T ss_pred             cceecChHHHHHHHHHHH
Confidence            499999999999999876

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.6e-29  Score=205.15  Aligned_cols=235  Identities=20%  Similarity=0.183  Sum_probs=186.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc--cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD--NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      .+|++|+||+|.|||..+++.+.+++-.....++++  ...+.+....++.......|++......++.+....++++.|
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~   84 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRD   84 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCcee
Confidence            468899999999999999999998886544433333  222222222234455566788888888999999999999999


Q ss_pred             EEEEcccCCCCCCCCC--CCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           80 IMYNNAGIVDRGFASV--LDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|||||...+- ...  ...+.++|++.|+.|+++...+...++|.+++++ .+.+||+||.++..+..+|.+||.+|+
T Consensus        85 iiI~NAG~lgdv-sk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka  163 (253)
T KOG1204|consen   85 IIIHNAGSLGDV-SKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA  163 (253)
T ss_pred             EEEecCCCccch-hhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence            999999987542 222  2556789999999999999999999999998774 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      |.++|.+.+|.|-. .++++.++.||.|+|+|+...    ...++....+......  +++.+|...|+.+..|+.... 
T Consensus       164 Ar~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~--~~ll~~~~~a~~l~~L~e~~~-  239 (253)
T KOG1204|consen  164 ARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKES--GQLLDPQVTAKVLAKLLEKGD-  239 (253)
T ss_pred             HHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhc--CCcCChhhHHHHHHHHHHhcC-
Confidence            99999999999865 799999999999999997532    2345555554443333  779999999999999986543 


Q ss_pred             CccccEEee
Q 044670          233 DVTGLNLVV  241 (302)
Q Consensus       233 ~~~G~~~~~  241 (302)
                      +.+|+.+..
T Consensus       240 f~sG~~vdy  248 (253)
T KOG1204|consen  240 FVSGQHVDY  248 (253)
T ss_pred             ccccccccc
Confidence            778887643

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=203.84  Aligned_cols=222  Identities=23%  Similarity=0.265  Sum_probs=178.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |..|++|||||+|+||+++++.|+++ ++|++++|+.+..+.+.+.. ..++++.+|++|++++.++++.    ++++|+
T Consensus         1 ~~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~----~~~id~   74 (227)
T PRK08219          1 MERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-PGATPFPVDLTDPEAIAAAVEQ----LGRLDV   74 (227)
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-ccceEEecCCCCHHHHHHHHHh----cCCCCE
Confidence            45689999999999999999999999 99999999877665554433 3578899999999998777664    357999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      |||++|....  .+..+.+.+++.+++++|+.+++.+++.+++.+.++ .+++|++||..+..+.++...|+.+|++++.
T Consensus        75 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~  151 (227)
T PRK08219         75 LVHNAGVADL--GPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRA  151 (227)
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHH
Confidence            9999997653  356677889999999999999999999999988765 5799999999888888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.++... |++++|.||++.+++......      .. .. ..+.+++++++|++++++++++.+.   .|.+++
T Consensus       152 ~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~------~~-~~-~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~  219 (227)
T PRK08219        152 LADALREEEPGN-VRVTSVHPGRTDTDMQRGLVA------QE-GG-EYDPERYLRPETVAKAVRFAVDAPP---DAHITE  219 (227)
T ss_pred             HHHHHHHHhcCC-ceEEEEecCCccchHhhhhhh------hh-cc-ccCCCCCCCHHHHHHHHHHHHcCCC---CCccce
Confidence            999999988766 999999999998875432210      00 01 1112568999999999999996543   355555


Q ss_pred             eCC
Q 044670          241 VDG  243 (302)
Q Consensus       241 ~~g  243 (302)
                      ++.
T Consensus       220 ~~~  222 (227)
T PRK08219        220 VVV  222 (227)
T ss_pred             EEE
Confidence            443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=2.2e-26  Score=206.39  Aligned_cols=267  Identities=14%  Similarity=0.125  Sum_probs=185.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++|++|||||+|+||++++++|+++|++|+++.|+...........     ..+++++.+|++|++++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            5799999999999999999999999999999888876543322111     2367889999999999888776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------  146 (302)
                      ++|+|||+||....      ..+.+++.+.+++|+.+++++++++.+.+   +.++||++||.++..+..          
T Consensus        77 ~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~  147 (325)
T PLN02989         77 GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVD  147 (325)
T ss_pred             CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccC
Confidence            68999999995421      22344678899999999999999998854   247899999976543211          


Q ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhcccc---C
Q 044670          147 ------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNL---R  210 (302)
Q Consensus       147 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~---~  210 (302)
                                  ....|+.||.+.+.+++.++++   +|+++++++|+.++||...... .....+........+.   .
T Consensus       148 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~  224 (325)
T PLN02989        148 ETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTH  224 (325)
T ss_pred             cCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcC
Confidence                        0246999999999999998866   4899999999999999865421 1223333333222111   1


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC--------ccccC--CCccce-------eeccCCccccc
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS--------LMKFA--SPFHLI-------KAIGDGCRSFL  273 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~--------~~~~~--~~~~~~-------~~~~~~~~~~~  273 (302)
                      +.+++++|+|++++.++.....   +..++++|+ .++..+        +....  .+....       ...+....+.+
T Consensus       225 r~~i~v~Dva~a~~~~l~~~~~---~~~~ni~~~-~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l  300 (325)
T PLN02989        225 HRFVDVRDVALAHVKALETPSA---NGRYIIDGP-VVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKSL  300 (325)
T ss_pred             cCeeEHHHHHHHHHHHhcCccc---CceEEEecC-CCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHHc
Confidence            4688999999999988864322   346788655 432111        10000  000001       11121222337


Q ss_pred             hh-HHHHHHHHHHhhhhcc
Q 044670          274 GI-SFIAMMCLIHKIQKVI  291 (302)
Q Consensus       274 g~-~~~~~~~~~~~~~~~~  291 (302)
                      |+ +..++++++.++++++
T Consensus       301 g~~p~~~l~~gi~~~~~~~  319 (325)
T PLN02989        301 GIIEFTPTETSLRDTVLSL  319 (325)
T ss_pred             CCCCCCCHHHHHHHHHHHH
Confidence            87 7779999999999885

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.95  E-value=6e-26  Score=203.28  Aligned_cols=266  Identities=14%  Similarity=0.130  Sum_probs=183.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .||+++||||+|+||++++++|+++|++|+++.|+....+......     ..+++++.+|++|++++.++++       
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   76 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-------   76 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-------
Confidence            5799999999999999999999999999999988876543322211     2468889999999999888877       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-CCC---------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-AGI---------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-~~~---------  146 (302)
                      .+|+|||+|+....   .    ..+...+++++|+.|+.++++++...   .+.++||++||.+... +.+         
T Consensus        77 ~~d~vih~A~~~~~---~----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~  146 (322)
T PLN02986         77 GCDAVFHTASPVFF---T----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVD  146 (322)
T ss_pred             CCCEEEEeCCCcCC---C----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcC
Confidence            68999999996421   1    11233568999999999999988763   2357999999976431 110         


Q ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-CCCHHHHHHHHHhcc---ccC
Q 044670          147 ------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-SINPAILEAFLSEMG---NLR  210 (302)
Q Consensus       147 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~---~~~  210 (302)
                                  ....|+.||.+.+.+++.+.++   +|+++++++|+.++||..... ......+..+.....   ...
T Consensus       147 E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~  223 (322)
T PLN02986        147 ETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRF  223 (322)
T ss_pred             cccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcC
Confidence                        1356999999999999998876   489999999999999976532 112333444433221   111


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC--------ccccCCC----ccce-ee---ccCCccccch
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS--------LMKFASP----FHLI-KA---IGDGCRSFLG  274 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~--------~~~~~~~----~~~~-~~---~~~~~~~~~g  274 (302)
                      +.+++++|+|++++.++..+..   ++.++++|+ .++..+        ++....+    .... ..   +-....+.+|
T Consensus       224 ~~~v~v~Dva~a~~~al~~~~~---~~~yni~~~-~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~lg  299 (322)
T PLN02986        224 YRFVDVRDVALAHIKALETPSA---NGRYIIDGP-IMSVNDIIDILRELFPDLCIADTNEESEMNEMICKVCVEKVKNLG  299 (322)
T ss_pred             cceeEHHHHHHHHHHHhcCccc---CCcEEEecC-CCCHHHHHHHHHHHCCCCCCCCCCccccccccCCccCHHHHHHcC
Confidence            4689999999999988865432   347888654 332111        1110100    0000 10   1112234579


Q ss_pred             hHHHHHHHHHHhhhhcc
Q 044670          275 ISFIAMMCLIHKIQKVI  291 (302)
Q Consensus       275 ~~~~~~~~~~~~~~~~~  291 (302)
                      ++++++++++.++++++
T Consensus       300 ~~~~~l~e~~~~~~~~~  316 (322)
T PLN02986        300 VEFTPMKSSLRDTILSL  316 (322)
T ss_pred             CcccCHHHHHHHHHHHH
Confidence            99999999999999874

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=5.1e-26  Score=207.15  Aligned_cols=194  Identities=23%  Similarity=0.202  Sum_probs=149.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||+++|||||||||++++++|+++|++|++++|++++...........+..+.+|++|++++.+.+       +++|+
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l-------~~IDi  248 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELL-------EKVDI  248 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHh-------CCCCE
Confidence            47899999999999999999999999999999999876654433222334678899999998876554       48999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC----CEEEEEcCcccccCCCCChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK----GCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|||||...     ..+.+.+++++++++|+.|++.++++++|.|++++.    +.+|++|| +.. ..+....|++||+
T Consensus       249 LInnAGi~~-----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~~-~~~~~~~Y~ASKa  321 (406)
T PRK07424        249 LIINHGINV-----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AEV-NPAFSPLYELSKR  321 (406)
T ss_pred             EEECCCcCC-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-ccc-cCCCchHHHHHHH
Confidence            999999743     235678899999999999999999999999976532    34566654 333 3344578999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      |+..++. +.++.  .++.+..+.||.+.|++..                    ...++||++|+.++++++...
T Consensus       322 Al~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~--------------------~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        322 ALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP--------------------IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc--------------------CCCCCHHHHHHHHHHHHHCCC
Confidence            9999974 44443  4567777888888776521                    125799999999999986543

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.95  E-value=7.8e-26  Score=202.66  Aligned_cols=214  Identities=16%  Similarity=0.098  Sum_probs=162.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||+|+||++++++|+++|  ++|++.+|+......+...+. .++.++.+|++|++++.++++       .
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            579999999999999999999999987  789999887665444433332 468899999999999888776       6


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+|||+||....   +...   .+.++.+++|+.|++++++++.+    .+.++||++||.....   +...|+.||++
T Consensus        75 iD~Vih~Ag~~~~---~~~~---~~~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~---p~~~Y~~sK~~  141 (324)
T TIGR03589        75 VDYVVHAAALKQV---PAAE---YNPFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAAN---PINLYGATKLA  141 (324)
T ss_pred             CCEEEECcccCCC---chhh---cCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCC---CCCHHHHHHHH
Confidence            8999999996431   2222   23357899999999999999987    3457999999975543   34679999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc--ccc-----CCCCCCHHHHHHHHHHhccCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM--GNL-----RGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+.+++.++.++..+|+++++++||+|++|...   ..+.+........  .+.     .+.+++++|++++++.++...
T Consensus       142 ~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~---~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~  218 (324)
T TIGR03589       142 SDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS---VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM  218 (324)
T ss_pred             HHHHHHHHHhhccccCcEEEEEeecceeCCCCC---cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC
Confidence            999999998887888999999999999998531   1233333332221  111     134789999999999888542


Q ss_pred             CCCccccEEe
Q 044670          231 ASDVTGLNLV  240 (302)
Q Consensus       231 ~~~~~G~~~~  240 (302)
                      .   .|++++
T Consensus       219 ~---~~~~~~  225 (324)
T TIGR03589       219 L---GGEIFV  225 (324)
T ss_pred             C---CCCEEc
Confidence            1   466663

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.95  E-value=1.1e-25  Score=203.70  Aligned_cols=230  Identities=14%  Similarity=0.075  Sum_probs=169.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||++|||||+|+||++++++|+++|++|++++|+..........+  ..++.++.+|++|.+++.+++++.     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            47899999999999999999999999999999998776543332222  245778899999999988888754     68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------CCC
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------AGI  146 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------~~~  146 (302)
                      |+|||+|+...      ...+.+++...+++|+.+++++++++.+.   ...+++|++||...+.            +..
T Consensus        77 d~vih~A~~~~------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~  147 (349)
T TIGR02622        77 EIVFHLAAQPL------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPLG  147 (349)
T ss_pred             CEEEECCcccc------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCCC
Confidence            99999999532      23345667889999999999999988642   2256899999965432            123


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCC----CCcEEEEEeCCcccCCcccCC-CCCHHHHHHHHHhccc------cCCCCCC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQ----YGLRVNCVSPYGLVSGISSRN-SINPAILEAFLSEMGN------LRGQVLN  215 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~  215 (302)
                      +...|+.||++++.+++.++.++.+    .++++++++|+.++||..... ...+.++.......+.      ..+.+++
T Consensus       148 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~  227 (349)
T TIGR02622       148 GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQH  227 (349)
T ss_pred             CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceee
Confidence            4568999999999999999988754    489999999999999864221 2234444444332211      1256899


Q ss_pred             HHHHHHHHHHhccCC--CCCccccEEeeCCC
Q 044670          216 AEGIANAALYLATDE--ASDVTGLNLVVDGG  244 (302)
Q Consensus       216 ~~dva~~~~~l~s~~--~~~~~G~~~~~~gG  244 (302)
                      ++|++++++.++...  .....|+.+++..|
T Consensus       228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            999999998776431  11123678999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02214 cinnamoyl-CoA reductase

Probab=99.94  E-value=2.1e-24  Score=194.80  Aligned_cols=261  Identities=15%  Similarity=0.109  Sum_probs=177.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH-HHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-LACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+.... ....+   ..++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            367899999999999999999999999999999997654221 11122   2357889999999999888776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------  146 (302)
                      ++|+|||+|+...           +++++.+++|+.++.++++++.+.    +.++||++||.++.++.+          
T Consensus        81 ~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~~~E  145 (342)
T PLN02214         81 GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAVVDE  145 (342)
T ss_pred             cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcccCc
Confidence            6899999998531           135688999999999999998863    456899999975443210          


Q ss_pred             -----------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhcc----ccC
Q 044670          147 -----------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMG----NLR  210 (302)
Q Consensus       147 -----------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~----~~~  210 (302)
                                 +...|+.||.+.|.+++.++.+   +|+++++++|+.|++|........ -..+........    ...
T Consensus       146 ~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~  222 (342)
T PLN02214        146 SCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLT  222 (342)
T ss_pred             ccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCC
Confidence                       2347999999999999998876   489999999999999975432111 111111111111    112


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC--------cc-----ccCC--Cccceee---ccCCcccc
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS--------LM-----KFAS--PFHLIKA---IGDGCRSF  272 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~--------~~-----~~~~--~~~~~~~---~~~~~~~~  272 (302)
                      +.+++++|+|++++.++....   .|..+++.++.. ...+        ++     ....  .......   .-++.. .
T Consensus       223 ~~~i~V~Dva~a~~~al~~~~---~~g~yn~~~~~~-~~~el~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~  297 (342)
T PLN02214        223 QAYVDVRDVALAHVLVYEAPS---ASGRYLLAESAR-HRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIK-D  297 (342)
T ss_pred             cCeeEHHHHHHHHHHHHhCcc---cCCcEEEecCCC-CHHHHHHHHHHHCCCCCCCCCCccccCCCCCccccCcHHHH-H
Confidence            468899999999998886432   233566654322 1111        10     0000  0000011   112223 4


Q ss_pred             chhHHHHHHHHHHhhhhcc
Q 044670          273 LGISFIAMMCLIHKIQKVI  291 (302)
Q Consensus       273 ~g~~~~~~~~~~~~~~~~~  291 (302)
                      +|+.++++++++.++++++
T Consensus       298 LG~~p~~lee~i~~~~~~~  316 (342)
T PLN02214        298 LGLEFTSTKQSLYDTVKSL  316 (342)
T ss_pred             cCCcccCHHHHHHHHHHHH
Confidence            8999999999999998875

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.93  E-value=4.4e-24  Score=227.36  Aligned_cols=179  Identities=16%  Similarity=0.127  Sum_probs=155.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCcc------------------------------------------
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDN------------------------------------------   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~------------------------------------------   38 (302)
                      +|+++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820                                          


Q ss_pred             -----HHHHHH---HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHH
Q 044670           39 -----LGQALA---CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN  110 (302)
Q Consensus        39 -----~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n  110 (302)
                           ......   +..+.++.++.+|++|.++++++++++.+. +++|+||||||+...  ..+.+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC--CCcccCCHHHHHHHHHHH
Confidence                 000111   223567899999999999999999999877 689999999998765  578889999999999999


Q ss_pred             hhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc
Q 044670          111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS  189 (302)
Q Consensus       111 ~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  189 (302)
                      +.|.+++++++.+.+    .++||++||.++..+.++...|+++|.+++.+++.++.++.  +++|++|+||++.|+|.
T Consensus      2153 v~G~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence            999999999988754    35799999999999999999999999999999999999874  48999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.93  E-value=7e-24  Score=189.79  Aligned_cols=266  Identities=16%  Similarity=0.134  Sum_probs=176.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH--h---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK--L---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +||++|||||+|+||++++++|+++|++|+++.|+..........  .   ..+++++.+|++|++++.++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            578999999999999999999999999999999876543222111  1   2467899999999998877776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-c-CCC--------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-I-AGI--------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~-~~~--------  146 (302)
                      ++|+|||+|+....   .    ..+..++.+++|+.++.++++++....   +.+++|++||.++. + +.+        
T Consensus        76 ~~d~Vih~A~~~~~---~----~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~  145 (322)
T PLN02662         76 GCEGVFHTASPFYH---D----VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVD  145 (322)
T ss_pred             CCCEEEEeCCcccC---C----CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCC
Confidence            68999999986421   1    111225789999999999999988742   35689999997532 1 110        


Q ss_pred             ------C------ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-CCCHHHHHHHHHhc---cccC
Q 044670          147 ------G------SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-SINPAILEAFLSEM---GNLR  210 (302)
Q Consensus       147 ------~------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~---~~~~  210 (302)
                            +      ...|+.||.+.+.+++.+.++   ++++++.++|+.++||..... ......+.......   +...
T Consensus       146 E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (322)
T PLN02662        146 ETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNAS  222 (322)
T ss_pred             cccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCC
Confidence                  0      147999999999999988765   589999999999999976432 11223333333221   1112


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC-------------ccccCCCccc--eeeccCCc-cccch
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS-------------LMKFASPFHL--IKAIGDGC-RSFLG  274 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~-------------~~~~~~~~~~--~~~~~~~~-~~~~g  274 (302)
                      ..+++++|+|++++.++..+..  .|. +++.| ..++..+             .+....+...  .....+.+ .+.+|
T Consensus       223 ~~~i~v~Dva~a~~~~~~~~~~--~~~-~~~~g-~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg  298 (322)
T PLN02662        223 YRWVDVRDVANAHIQAFEIPSA--SGR-YCLVE-RVVHYSEVVKILHELYPTLQLPEKCADDKPYVPTYQVSKEKAKSLG  298 (322)
T ss_pred             cCeEEHHHHHHHHHHHhcCcCc--CCc-EEEeC-CCCCHHHHHHHHHHHCCCCCCCCCCCCccccccccccChHHHHHhC
Confidence            5689999999999988864322  354 45544 3322111             0000000000  00001111 12378


Q ss_pred             hHHHHHHHHHHhhhhcc
Q 044670          275 ISFIAMMCLIHKIQKVI  291 (302)
Q Consensus       275 ~~~~~~~~~~~~~~~~~  291 (302)
                      +++.++++++.++++++
T Consensus       299 ~~~~~~~~~l~~~~~~~  315 (322)
T PLN02662        299 IEFIPLEVSLKDTVESL  315 (322)
T ss_pred             CccccHHHHHHHHHHHH
Confidence            88889999999888764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.93  E-value=9.6e-24  Score=191.27  Aligned_cols=208  Identities=20%  Similarity=0.171  Sum_probs=153.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +.|++|||||+|+||++++++|+++|++|++++|+.+.........     ..++.++.+|++|.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            5789999999999999999999999999999998866554432221     1257889999999999887776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----C------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----I------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----~------  146 (302)
                      .+|+|||+|+....     .  ..+.++..+++|+.++.++++++.+..   ..++||++||.+...+.    +      
T Consensus        77 ~~d~ViH~A~~~~~-----~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~  146 (351)
T PLN02650         77 GCTGVFHVATPMDF-----E--SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDC  146 (351)
T ss_pred             CCCEEEEeCCCCCC-----C--CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCccc
Confidence            68999999985321     1  112345789999999999999998742   24689999997543211    0      


Q ss_pred             ------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHH--H-hcc----
Q 044670          147 ------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL--S-EMG----  207 (302)
Q Consensus       147 ------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~-~~~----  207 (302)
                                  +...|+.||.+.|.+++.++.+   +|+++++++|+.++||...... .+.+.....  . ...    
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~-~~~~~~~~~~~~~~~~~~~~  222 (351)
T PLN02650        147 WSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSM-PPSLITALSLITGNEAHYSI  222 (351)
T ss_pred             CCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCC-CccHHHHHHHhcCCccccCc
Confidence                        1237999999999999999876   5899999999999999765422 222222111  1 100    


Q ss_pred             ccCCCCCCHHHHHHHHHHhccCC
Q 044670          208 NLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       208 ~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ...+.+++++|++++++.++...
T Consensus       223 ~~~r~~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        223 IKQGQFVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             CCCcceeeHHHHHHHHHHHhcCc
Confidence            01157899999999999988643

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.93  E-value=4.2e-24  Score=173.84  Aligned_cols=172  Identities=20%  Similarity=0.278  Sum_probs=145.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHH------HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQAL------ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+++||||++|||.+++++|+++|+ .|++++|+.......      ....+.++.++.+|++++++++++++++...++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 678888875433221      112245678899999999999999999998899


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|.+|||||....  .+..+.+.+++++++++|+.+++.+++.+.+    .+.++++++||..+..+.+++..|+.+|.
T Consensus        81 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~ii~~ss~~~~~~~~~~~~y~~sk~  154 (180)
T smart00822       81 PLRGVIHAAGVLDD--GLLANLTPERFAAVLAPKVDGAWNLHELTRD----LPLDFFVLFSSVAGVLGNPGQANYAAANA  154 (180)
T ss_pred             CeeEEEEccccCCc--cccccCCHHHHHHhhchHhHHHHHHHHHhcc----CCcceEEEEccHHHhcCCCCchhhHHHHH
Confidence            99999999997653  4567778899999999999999999998854    34689999999999888899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLV  185 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~  185 (302)
                      +++.+++.++.    .++++++++||++.
T Consensus       155 ~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      155 FLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHh----cCCceEEEeecccc
Confidence            99998877653    58999999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.93  E-value=5.8e-24  Score=198.30  Aligned_cols=218  Identities=13%  Similarity=0.156  Sum_probs=162.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------------CCCeEEEEecCCCHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------------GEDVCYIHCDVTSEDEITNLVD   69 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~Dl~~~~~v~~~~~   69 (302)
                      +||++|||||+||||++++++|+++|++|++++|+.++...+.+.+            ..++.++.+|++|.+++.+.+ 
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL-  157 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL-  157 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh-
Confidence            6899999999999999999999999999999999988776654432            125788999999999876644 


Q ss_pred             HHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCC
Q 044670           70 TAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGS  148 (302)
Q Consensus        70 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~  148 (302)
                            +++|+||||+|....        ...++...+++|+.|+.++++++.+.    +.++||++||.++. .+.+. 
T Consensus       158 ------ggiDiVVn~AG~~~~--------~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVgRIV~VSSiga~~~g~p~-  218 (576)
T PLN03209        158 ------GNASVVICCIGASEK--------EVFDVTGPYRIDYLATKNLVDAATVA----KVNHFILVTSLGTNKVGFPA-  218 (576)
T ss_pred             ------cCCCEEEEccccccc--------cccchhhHHHHHHHHHHHHHHHHHHh----CCCEEEEEccchhcccCccc-
Confidence                  479999999996431        11246788999999999999998763    56899999998764 22222 


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|. +|.++..+.+.+..++...||++++|+||++.|++..... .... ......  .+.++.++.+|||+.++++++
T Consensus       219 ~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~-t~~v-~~~~~d--~~~gr~isreDVA~vVvfLas  293 (576)
T PLN03209        219 AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE-THNL-TLSEED--TLFGGQVSNLQVAELMACMAK  293 (576)
T ss_pred             cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc-ccce-eecccc--ccCCCccCHHHHHHHHHHHHc
Confidence            2244 7888888888888888888999999999999988654211 1111 000111  223678899999999999998


Q ss_pred             CCCCCccccEEeeCCCc
Q 044670          229 DEASDVTGLNLVVDGGF  245 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~  245 (302)
                      +... ..++++.+-.+-
T Consensus       294 d~~a-s~~kvvevi~~~  309 (576)
T PLN03209        294 NRRL-SYCKVVEVIAET  309 (576)
T ss_pred             Cchh-ccceEEEEEeCC
Confidence            5432 146777665553

>PLN02583 cinnamoyl-CoA reductase

Probab=99.93  E-value=9.6e-24  Score=186.94  Aligned_cols=217  Identities=15%  Similarity=0.057  Sum_probs=155.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++|+++||||+|+||++++++|+++|++|+++.|+.+.  .......+   +.++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            47899999999999999999999999999999986432  22222222   2467889999999999877665       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC---C-------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG---I-------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~---~-------  146 (302)
                      .+|.++|.++...       +.. .++++++++|+.|++++++++.+.+   +.++||++||.++....   .       
T Consensus        78 ~~d~v~~~~~~~~-------~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~  146 (297)
T PLN02583         78 GCSGLFCCFDPPS-------DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVD  146 (297)
T ss_pred             CCCEEEEeCccCC-------ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCC
Confidence            6899999775321       111 2467899999999999999998864   34799999997654211   0       


Q ss_pred             --CC----------hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCC
Q 044670          147 --GS----------PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL  214 (302)
Q Consensus       147 --~~----------~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (302)
                        .+          ..|+.||...|.+++.++++   +|+++++|+|++|+||......  + ...............++
T Consensus       147 E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~~~~v  220 (297)
T PLN02583        147 ERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMYENGVLVTV  220 (297)
T ss_pred             cccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch--h-hhcCCcccCcccCcceE
Confidence              01          16999999999999998765   4899999999999999764321  1 11100000011113488


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++|+|++++.++.....  .| .+.+.++.
T Consensus       221 ~V~Dva~a~~~al~~~~~--~~-r~~~~~~~  248 (297)
T PLN02583        221 DVNFLVDAHIRAFEDVSS--YG-RYLCFNHI  248 (297)
T ss_pred             EHHHHHHHHHHHhcCccc--CC-cEEEecCC
Confidence            999999999999864432  34 56666654

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.92  E-value=1.2e-23  Score=190.82  Aligned_cols=227  Identities=18%  Similarity=0.125  Sum_probs=163.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEE-EEecCccH--HHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNL--GQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~-~~~r~~~~--~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |++|||||||+||++++++|+++|+.++ +++|..+.  ...+... ...++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            6899999999999999999999998855 44544321  1111111 1235778899999999988887752     699


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc---c--CCCCEEEEEcCccccc-----------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI---P--QHKGCILFTASACTEI-----------  143 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~iv~~sS~~~~~-----------  143 (302)
                      +|||+||....      ..+.++++..+++|+.++.++++++.+.+.   .  .+..++|++||.+.+.           
T Consensus        77 ~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         77 CVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             EEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            99999996431      233456789999999999999999987532   1  2245899999865322           


Q ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-cc------CCCCC
Q 044670          144 --AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-NL------RGQVL  214 (302)
Q Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~  214 (302)
                        +..+...|+.||.+.+.+++.++++   +++++..++|+.+++|........+.++.......+ +.      .+.++
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~---~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  227 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRT---YGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWL  227 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcC
Confidence              1234678999999999999999877   478999999999999976432222333333332221 11      14589


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++|+++++..++...   ..|+++++.+|..+
T Consensus       228 ~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        228 YVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             cHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            9999999998887542   24788999888764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.92  E-value=1.7e-23  Score=194.52  Aligned_cols=227  Identities=11%  Similarity=0.002  Sum_probs=159.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc---H--------------HHHH---HHHhCCCeEEEEecCCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN---L--------------GQAL---ACKLGEDVCYIHCDVTS   60 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~---~--------------~~~~---~~~~~~~~~~~~~Dl~~   60 (302)
                      +++|+||||||+|+||++++++|+++|++|++++|...   .              .+.+   ....+.+++++.+|++|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            46899999999999999999999999999999864211   0              0111   11112368899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           61 EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        61 ~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      .++++++++..     ++|+|||+|+....   +....++++++..+++|+.|++++++++...-   ...++|++||.+
T Consensus       125 ~~~v~~~l~~~-----~~D~ViHlAa~~~~---~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~~SS~~  193 (442)
T PLN02572        125 FEFLSEAFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVKLGTMG  193 (442)
T ss_pred             HHHHHHHHHhC-----CCCEEEECCCcccC---hhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEEEecce
Confidence            99988888754     68999999975331   33334455677889999999999999987742   124799999876


Q ss_pred             cccC------------------------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--
Q 044670          141 TEIA------------------------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--  194 (302)
Q Consensus       141 ~~~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--  194 (302)
                      .+..                        ..+...|+.||.+.+.+++.++..   +|+++.+++|+.|+||.......  
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~~~~~~  270 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDETMMDE  270 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCccccccc
Confidence            4421                        112357999999999999988765   58999999999999997543210  


Q ss_pred             ---------------CHHHHHHHHHhcc-cc------CCCCCCHHHHHHHHHHhccCCCCCccc--cEEeeCC
Q 044670          195 ---------------NPAILEAFLSEMG-NL------RGQVLNAEGIANAALYLATDEASDVTG--LNLVVDG  243 (302)
Q Consensus       195 ---------------~~~~~~~~~~~~~-~~------~~~~~~~~dva~~~~~l~s~~~~~~~G--~~~~~~g  243 (302)
                                     .+.++.......+ ..      .+.+++++|++++++.++....  ..|  .++++.+
T Consensus       271 ~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        271 ELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             ccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                           1122222222211 11      1468999999999998885321  134  4677754

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.92  E-value=1.8e-23  Score=189.24  Aligned_cols=227  Identities=17%  Similarity=0.106  Sum_probs=164.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH----Hh----CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC----KL----GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +++|++|||||||+||++++++|+++|++|++++|..........    ..    ..++.++.+|++|.+++.++++   
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~---   89 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK---   89 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh---
Confidence            467999999999999999999999999999999886543221111    11    1357889999999988777765   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------  145 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------  145 (302)
                          .+|+|||.|+....   +   ...++....+++|+.|+.++++++..    .+..++|++||.+.+...       
T Consensus        90 ----~~d~ViHlAa~~~~---~---~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e  155 (348)
T PRK15181         90 ----NVDYVLHQAALGSV---P---RSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDHPDLPKIE  155 (348)
T ss_pred             ----CCCEEEECccccCc---h---hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCCCCCCCCC
Confidence                68999999996432   1   12234456899999999999998876    345689999987544321       


Q ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHhccc-c------C
Q 044670          146 ----IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSEMGN-L------R  210 (302)
Q Consensus       146 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~-~------~  210 (302)
                          .+...|+.||.+.+.+++.++.+   +++++..++|+.+++|......    ..+.++.......+. .      .
T Consensus       156 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~  232 (348)
T PRK15181        156 ERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTS  232 (348)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCce
Confidence                13457999999999999888765   4899999999999999764321    124444444432221 1      1


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.+++++|++++++.++........|+++++.+|...
T Consensus       233 rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        233 RDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             EeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence            4578999999998876643222235789999888664

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.92  E-value=6e-23  Score=185.13  Aligned_cols=210  Identities=17%  Similarity=0.164  Sum_probs=152.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH--HHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA--CKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+......  ..+.  .++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            46899999999999999999999999999998888765433221  1111  257889999999998877765       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      ++|+|||+|+...     ..  ..+.+...+++|+.++.++++++.+.   .+.+++|++||.+.+...           
T Consensus        80 ~~d~vih~A~~~~-----~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E  149 (338)
T PLN00198         80 GCDLVFHVATPVN-----FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNE  149 (338)
T ss_pred             cCCEEEEeCCCCc-----cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceecc
Confidence            6899999998432     11  12234567899999999999998874   235799999997654311           


Q ss_pred             -------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhccc-c-
Q 044670          146 -------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGN-L-  209 (302)
Q Consensus       146 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~-~-  209 (302)
                                   ++...|+.||.+.|.+++.++.+   +|+++++++|+.|+||........ -............ . 
T Consensus       150 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~  226 (338)
T PLN00198        150 KNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLIN  226 (338)
T ss_pred             ccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccc
Confidence                         13456999999999999998866   589999999999999975432111 1111111111100 0 


Q ss_pred             ----------CCCCCCHHHHHHHHHHhccCC
Q 044670          210 ----------RGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       210 ----------~~~~~~~~dva~~~~~l~s~~  230 (302)
                                .+.+++++|++++++.++...
T Consensus       227 g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        227 GLKGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             cccccccccCCcceeEHHHHHHHHHHHhhCc
Confidence                      136899999999999888653

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.92  E-value=3.6e-23  Score=174.61  Aligned_cols=224  Identities=17%  Similarity=0.100  Sum_probs=178.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCc--cHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQD--NLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|||||.|+||+++++.+.++..  +|+.++.-.  ...+.+.... ..+..++++|++|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4789999999999999999999764  466665532  2223332222 258999999999999988888754     69


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-------------CC
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-------------AG  145 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-------------~~  145 (302)
                      |+++|-|+      ....+.+.++.+..+++|+.|+++|+.++..+...   -|++.+|+--.+.             +.
T Consensus        76 D~VvhfAA------ESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp~  146 (340)
T COG1088          76 DAVVHFAA------ESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTPY  146 (340)
T ss_pred             CeEEEech------hccccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCCC
Confidence            99999998      34556777788999999999999999999997532   4799999744322             22


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccC-------CCCCCHHH
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-------GQVLNAEG  218 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d  218 (302)
                      .+.++|++|||+.+++++++.+-   +|++++..++.+.++|.+.+....|..+...+...+.|+       +.++.++|
T Consensus       147 ~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeD  223 (340)
T COG1088         147 NPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVED  223 (340)
T ss_pred             CCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHh
Confidence            36788999999999999999977   699999999999999999988878877777766555443       66889999


Q ss_pred             HHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          219 IANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       219 va~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      -+.++..++....   -||++++.||...
T Consensus       224 h~~ai~~Vl~kg~---~GE~YNIgg~~E~  249 (340)
T COG1088         224 HCRAIDLVLTKGK---IGETYNIGGGNER  249 (340)
T ss_pred             HHHHHHHHHhcCc---CCceEEeCCCccc
Confidence            9999988886543   3999999999884

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.91  E-value=2.2e-22  Score=182.46  Aligned_cols=212  Identities=19%  Similarity=0.195  Sum_probs=153.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++++|||||+|+||++++++|+++|++|++++|+......+...+  +.+++++.+|+++.+++.++++       .+|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCD   81 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCC
Confidence            5789999999999999999999999999999998866555444333  2468889999999999877765       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHH--HHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDL--DRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------  145 (302)
                      +|||+|+...... .....+.+.+  ..++++|+.++.++++++.+..   +.+++|++||.+.+...            
T Consensus        82 ~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E  157 (353)
T PLN02896         82 GVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDE  157 (353)
T ss_pred             EEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCc
Confidence            9999999754210 0111222222  4577888899999999988742   35689999997654311            


Q ss_pred             -------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH---hcccc
Q 044670          146 -------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS---EMGNL  209 (302)
Q Consensus       146 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~~~~  209 (302)
                                   ++...|+.||.+.|.+++.++++   +|+++++++|+.|+||.....  .+..+.....   .....
T Consensus       158 ~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~  232 (353)
T PLN02896        158 TCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVITTTVAGPFLTPS--VPSSIQVLLSPITGDSKL  232 (353)
T ss_pred             ccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcCCcccCCCcCCC--CCchHHHHHHHhcCCccc
Confidence                         01137999999999999998866   489999999999999976532  1222222221   10100


Q ss_pred             ------------CCCCCCHHHHHHHHHHhccC
Q 044670          210 ------------RGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       210 ------------~~~~~~~~dva~~~~~l~s~  229 (302)
                                  .+.+++++|+|++++.++..
T Consensus       233 ~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        233 FSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                        12578999999999988854

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.91  E-value=6e-23  Score=179.76  Aligned_cols=220  Identities=20%  Similarity=0.209  Sum_probs=160.6

Q ss_pred             EEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHH-HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            7 IITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQ-ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         7 lVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |||||+|+||++++++|+++|  ++|.++++...... ...... ....++.+|++|++++.++++       ..|+|||
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V~H   72 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVVFH   72 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc-cceeEEEeccccHHHHHHHhc-------CCceEEE
Confidence            699999999999999999999  78988888765432 111221 233489999999999999888       7899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---CC--------------
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---GI--------------  146 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---~~--------------  146 (302)
                      +|+....       ......++++++|+.|+.++++++..    .+..++|++||.+....   ..              
T Consensus        73 ~Aa~~~~-------~~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~  141 (280)
T PF01073_consen   73 TAAPVPP-------WGDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSS  141 (280)
T ss_pred             eCccccc-------cCcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCccccc
Confidence            9996532       11335678999999999999999987    46789999999887654   11              


Q ss_pred             CChhHHHHHHHHHHHHHHHHH-HHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHh-c-ccc-----CCCCCCHH
Q 044670          147 GSPAYTVSKYGIIALVKILAA-ELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE-M-GNL-----RGQVLNAE  217 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~-e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~-~~~-----~~~~~~~~  217 (302)
                      ....|+.||+..|.+++.... ++.+ .+++.++|+|..|+||......  +...+..... . ...     ...+++++
T Consensus       142 ~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~--~~~~~~~~~g~~~~~~g~~~~~~~~vyV~  219 (280)
T PF01073_consen  142 PLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLV--PRLVKMVRSGLFLFQIGDGNNLFDFVYVE  219 (280)
T ss_pred             ccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCccccccc--chhhHHHHhcccceeecCCCceECcEeHH
Confidence            234799999999999988764 1111 2599999999999999865542  2222222221 0 001     13377899


Q ss_pred             HHHHHHHHhccC---C--CCCccccEEeeCCCccc
Q 044670          218 GIANAALYLATD---E--ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       218 dva~~~~~l~s~---~--~~~~~G~~~~~~gG~~~  247 (302)
                      ++|.+++.++..   .  .....||.|++..+...
T Consensus       220 NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  220 NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             HHHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            999999876532   2  34578999999888554

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.91  E-value=4.6e-22  Score=179.52  Aligned_cols=228  Identities=15%  Similarity=-0.001  Sum_probs=157.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALACK---LGEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      .++|++|||||+|+||++++++|+++|++|++++|+++.     .+.+...   .+..+.++.+|++|.+++.++++.. 
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   82 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI-   82 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc-
Confidence            368999999999999999999999999999999886542     2222110   1235788999999999988888764 


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCC------
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAG------  145 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~------  145 (302)
                          ++|+|||+|+....      ....+..+..+++|+.++.++++++.+.+.+++ ..++|++||...+...      
T Consensus        83 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E  152 (340)
T PLN02653         83 ----KPDEVYNLAAQSHV------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSE  152 (340)
T ss_pred             ----CCCEEEECCcccch------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCC
Confidence                58999999996432      122334577889999999999999999764321 1378888886433221      


Q ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH----HHHhccc-c-------
Q 044670          146 ----IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA----FLSEMGN-L-------  209 (302)
Q Consensus       146 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~----~~~~~~~-~-------  209 (302)
                          .+...|+.||.+++.+++.++.++   ++.+....+..+++|...... ....+..    .....+. .       
T Consensus       153 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        153 TTPFHPRSPYAVAKVAAHWYTVNYREAY---GLFACNGILFNHESPRRGENF-VTRKITRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCeEEEeeeccccCCCCCccc-chhHHHHHHHHHHcCCCCceEeCCCcc
Confidence                135689999999999999998774   455554455555555432221 1122222    1121111 1       


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      .+.+++++|+|++++.++...    .+..+++.+|...
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~----~~~~yni~~g~~~  262 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQE----KPDDYVVATEESH  262 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcC----CCCcEEecCCCce
Confidence            146899999999999888542    2457888887764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.90  E-value=1.1e-21  Score=177.30  Aligned_cols=226  Identities=13%  Similarity=0.034  Sum_probs=155.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ...+.+..    +..++++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999987542     22221111    235789999999999988888754   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------  144 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------  144 (302)
                        ++|+|||+|+....      ....+.....+++|+.|+.++++++.+.-.+ ...++|++||...+..          
T Consensus        78 --~~d~ViH~Aa~~~~------~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~  148 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV------KVSFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETT  148 (343)
T ss_pred             --CCCEEEECCccccc------chhhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCC
Confidence              58999999996432      1122234577889999999999999874211 1247999999754331          


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhcc--------ccCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMG--------NLRGQ  212 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~--------~~~~~  212 (302)
                       ..+.+.|+.||.+.+.+++.++.++   |+++....+..+.+|........   ...+.......+        ...+.
T Consensus       149 ~~~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  225 (343)
T TIGR01472       149 PFYPRSPYAAAKLYAHWITVNYREAY---GLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRD  225 (343)
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccC
Confidence             1245689999999999999998774   56655556656666643221111   112222222211        11256


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +++++|++++++.++....    +..+++.+|...+
T Consensus       226 ~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~~s  257 (343)
T TIGR01472       226 WGHAKDYVEAMWLMLQQDK----PDDYVIATGETHS  257 (343)
T ss_pred             ceeHHHHHHHHHHHHhcCC----CccEEecCCCcee
Confidence            8999999999988875432    3478888777643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.90  E-value=8.7e-23  Score=168.18  Aligned_cols=227  Identities=20%  Similarity=0.263  Sum_probs=178.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-----EEEEEecCccHHHHHHHHh----C---CCeEEEEecCCCHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-----KVVIADVQDNLGQALACKL----G---EDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-----~V~~~~r~~~~~~~~~~~~----~---~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      |-.|++||||+++|||.+++++|++...     ++++++|+.+++++....+    +   .+++++.+|+++..+|.++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            3468999999999999999999998654     4777899999998877665    2   46889999999999999999


Q ss_pred             HHHHHHcCCccEEEEcccCCCCC-CC------------------------CCCCCCHHHHHHHHHHHhhHHHHHHHHHHH
Q 044670           69 DTAVAKYGKLDIMYNNAGIVDRG-FA------------------------SVLDTPKSDLDRVLAVNTTGGFLGAKHAAR  123 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~~~-~~------------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  123 (302)
                      .++..+|.++|.++.|||.+..+ ..                        ..-..+.|+....|+.|+.|+|.+.+.+.|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            99999999999999999987532 00                        122356788999999999999999999999


Q ss_pred             hhccCCCCEEEEEcCcccccCC---------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC
Q 044670          124 VMIPQHKGCILFTASACTEIAG---------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI  194 (302)
Q Consensus       124 ~l~~~~~~~iv~~sS~~~~~~~---------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~  194 (302)
                      .+-.+....+|.+||..+....         .+..+|..||.+.+.+.-++-+.+.+.|+.-.+++||...|.+......
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            9987777799999998765432         3567899999999999999999999999999999999998887654432


Q ss_pred             CH----HHHHHHHH-hccccCCCCCCHHHHHHHHHHhcc
Q 044670          195 NP----AILEAFLS-EMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       195 ~~----~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .-    ....-+.. -...+ ...+++--.|.+.+|+.-
T Consensus       241 ~~~~~~~~~~fyl~rllgsp-wh~id~y~aa~A~vw~~l  278 (341)
T KOG1478|consen  241 PFTYFGMLCGFYLARLLGSP-WHNIDPYKAANAPVWVTL  278 (341)
T ss_pred             hHHHHHHHHHHHHHHHhcCc-ccccCccccccchhhhhh
Confidence            11    00011111 11122 223677778888888774

>PLN02686 cinnamoyl-CoA reductase

Probab=99.89  E-value=1.8e-21  Score=177.29  Aligned_cols=224  Identities=15%  Similarity=0.117  Sum_probs=154.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +++|+||||||+|+||++++++|+++|++|+++.|+.+....+....        +..+.++.+|++|.+++.++++   
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~---  127 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD---  127 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH---
Confidence            36899999999999999999999999999999888765544432210        1247889999999999888877   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccC----C--
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIA----G--  145 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~----~--  145 (302)
                          .+|.+||.|+.....  ...    .......++|+.++.++++++...   .+..++|++||.++ .++    .  
T Consensus       128 ----~~d~V~hlA~~~~~~--~~~----~~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 ----GCAGVFHTSAFVDPA--GLS----GYTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             ----hccEEEecCeeeccc--ccc----cccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCCCCC
Confidence                579999999865321  110    011345678999999999988763   13568999999631 110    0  


Q ss_pred             ----------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc
Q 044670          146 ----------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL  209 (302)
Q Consensus       146 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (302)
                                      .+...|+.||.+.+.+++.++.+   +|+++++++|++|+||...... ..... .......+.
T Consensus       195 ~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~-~~~~~-~~~~g~~~~  269 (367)
T PLN02686        195 PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRN-STATI-AYLKGAQEM  269 (367)
T ss_pred             CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCC-ChhHH-HHhcCCCcc
Confidence                            02246999999999999988866   5899999999999999754321 11111 222211111


Q ss_pred             C----CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          210 R----GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       210 ~----~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      .    ..+++++|++++++.++........|+++ +..|..
T Consensus       270 ~g~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~~  309 (367)
T PLN02686        270 LADGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDHV  309 (367)
T ss_pred             CCCCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCCC
Confidence            1    24789999999998887532111235555 333444

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.89  E-value=1.8e-21  Score=176.43  Aligned_cols=225  Identities=18%  Similarity=0.145  Sum_probs=158.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCc--cHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAK-VVIADVQD--NLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~--~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|||||+|+||++++++|+++|+. |+.+++..  .......... +.+++++.+|++|.+++.+++++.     .+|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCE
Confidence            6999999999999999999999986 44455432  1222222111 245778899999999988888752     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-----CCCCEEEEEcCcccccC-----------
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-----QHKGCILFTASACTEIA-----------  144 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-----~~~~~iv~~sS~~~~~~-----------  144 (302)
                      |||+|+....      ....+..++.+++|+.|+.++++++.+.|.+     .+..++|++||...+..           
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         77 VMHLAAESHV------DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             EEECCcccCC------cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            9999996432      1112345778999999999999999987532     12358999998653321           


Q ss_pred             ----------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-cc----
Q 044670          145 ----------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-NL----  209 (302)
Q Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~----  209 (302)
                                ..+...|+.||.+.+.+++.++.+   +|+++..++|+.|++|........+.++........ +.    
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRT---YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence                      123468999999999999999876   478889999999999975332222333333332211 11    


Q ss_pred             --CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          210 --RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       210 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                        .+.+++++|++.++..++...   ..|+.+++.++..
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~  263 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNE  263 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCc
Confidence              145889999999998887542   2478888887765

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.89  E-value=1.9e-21  Score=173.27  Aligned_cols=224  Identities=16%  Similarity=0.123  Sum_probs=160.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCcc--HHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDN--LGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++||||||+||.+++++|+++|  ++|++.+|...  ..+.+.... ..++.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  78888876432  111111111 235788999999999988887743     589


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------CC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------IG  147 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------~~  147 (302)
                      +|||+|+....      +.+.+.++..+++|+.++.++++++.+.+.   ..++|++||...+...            .+
T Consensus        76 ~vi~~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~  146 (317)
T TIGR01181        76 AVVHFAAESHV------DRSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP  146 (317)
T ss_pred             EEEEcccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence            99999996432      223345678899999999999998887542   3479999986533211            13


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-cc------CCCCCCHHHHH
Q 044670          148 SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-NL------RGQVLNAEGIA  220 (302)
Q Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~dva  220 (302)
                      ...|+.+|.+.+.+++.++.+   .++++++++|+.+++|........+.++.......+ +.      ...+++++|++
T Consensus       147 ~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a  223 (317)
T TIGR01181       147 SSPYSASKAASDHLVRAYHRT---YGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHC  223 (317)
T ss_pred             CCchHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHH
Confidence            457999999999999998876   479999999999999875433222333333332211 11      12478999999


Q ss_pred             HHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          221 NAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       221 ~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +++..++...   ..|+++++.++..+.
T Consensus       224 ~~~~~~~~~~---~~~~~~~~~~~~~~s  248 (317)
T TIGR01181       224 RAIYLVLEKG---RVGETYNIGGGNERT  248 (317)
T ss_pred             HHHHHHHcCC---CCCceEEeCCCCcee
Confidence            9999888543   257889998886643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02240 UDP-glucose 4-epimerase

Probab=99.89  E-value=5.7e-21  Score=173.07  Aligned_cols=231  Identities=16%  Similarity=0.177  Sum_probs=160.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH----HHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACK---LGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |++|+++||||+|+||++++++|+++|++|++++|.....    ......   .+.++.++.+|++|++++.++++..  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            5789999999999999999999999999999998754321    112111   1245788999999999988877653  


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---------
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---------  144 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---------  144 (302)
                         .+|+|||+|+....      ..+.+++.+.+++|+.++.++++++..    .+.+++|++||...+..         
T Consensus        81 ---~~d~vih~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~E~  147 (352)
T PLN02240         81 ---RFDAVIHFAGLKAV------GESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCTEE  147 (352)
T ss_pred             ---CCCEEEEccccCCc------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCC
Confidence               68999999996431      122346778999999999999987655    34568999999653321         


Q ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC------CCCCH---HHHHHHHHhc-cc----
Q 044670          145 --GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR------NSINP---AILEAFLSEM-GN----  208 (302)
Q Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~---~~~~~~~~~~-~~----  208 (302)
                        ..+...|+.||.+.+.+++.++.+  ..++++..++|+.++++....      .....   .++....... +.    
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (352)
T PLN02240        148 FPLSATNPYGRTKLFIEEICRDIHAS--DPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVF  225 (352)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEe
Confidence              124568999999999999988755  236888999988888753211      00011   1222222111 00    


Q ss_pred             ----------cCCCCCCHHHHHHHHHHhccCC--CCCccccEEeeCCCcccC
Q 044670          209 ----------LRGQVLNAEGIANAALYLATDE--ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       209 ----------~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~~~~~gG~~~~  248 (302)
                                ..+.+++++|++++++.++...  .....|+++++.+|..++
T Consensus       226 g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s  277 (352)
T PLN02240        226 GNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS  277 (352)
T ss_pred             CCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence                      0134688999999988777421  122356899998887743

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.89  E-value=1.6e-21  Score=174.66  Aligned_cols=216  Identities=19%  Similarity=0.177  Sum_probs=157.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++||||+|+||++++++|+++|++|++++|+.+......   ...++++.+|++|.+++.++++       .+|+|||
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi~   70 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE---GLDVEIVEGDLRDPASLRKAVA-------GCRALFH   70 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc---cCCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            47999999999999999999999999999999876543221   2357889999999999888776       6899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC---------------CC
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI---------------GS  148 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------------~~  148 (302)
                      +|+....        ..++++..+++|+.++.++++++..    .+.+++|++||...+...+               ..
T Consensus        71 ~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~  138 (328)
T TIGR03466        71 VAADYRL--------WAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMI  138 (328)
T ss_pred             eceeccc--------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccccc
Confidence            9985321        1224577899999999999998876    3457899999976543211               13


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc----cCCCCCCHHHHHHHHH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN----LRGQVLNAEGIANAAL  224 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~  224 (302)
                      ..|+.+|.+.+.+++.++.+   ++++++.++|+.++++...........+........+    ....+++++|+|++++
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~  215 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHL  215 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHH
Confidence            47999999999999998765   5899999999999998754322222222222221111    1134789999999998


Q ss_pred             HhccCCCCCccccEEeeCCCcccC
Q 044670          225 YLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .++...   ..|+.++++ |..++
T Consensus       216 ~~~~~~---~~~~~~~~~-~~~~s  235 (328)
T TIGR03466       216 LALERG---RIGERYILG-GENLT  235 (328)
T ss_pred             HHHhCC---CCCceEEec-CCCcC
Confidence            887543   257888775 44433

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.88  E-value=3e-21  Score=177.13  Aligned_cols=221  Identities=15%  Similarity=0.131  Sum_probs=155.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +.++||||||||+||++++++|+++ |++|++++|+.+....+...    ...+++++.+|++|.+++.++++       
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-------   85 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-------   85 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-------
Confidence            4568999999999999999999998 59999999876654443321    12368899999999999877776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      .+|+|||+|+....  ..    ...+..+.+..|+.++.++++++...    + .++|++||...+...           
T Consensus        86 ~~d~ViHlAa~~~~--~~----~~~~~~~~~~~n~~gt~~ll~aa~~~----~-~r~v~~SS~~vYg~~~~~~~~e~~p~  154 (386)
T PLN02427         86 MADLTINLAAICTP--AD----YNTRPLDTIYSNFIDALPVVKYCSEN----N-KRLIHFSTCEVYGKTIGSFLPKDHPL  154 (386)
T ss_pred             cCCEEEEcccccCh--hh----hhhChHHHHHHHHHHHHHHHHHHHhc----C-CEEEEEeeeeeeCCCcCCCCCccccc
Confidence            58999999996432  01    11122355678999999999887652    2 689999997543210           


Q ss_pred             ----------------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-------CCCH
Q 044670          146 ----------------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-------SINP  196 (302)
Q Consensus       146 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~~~  196 (302)
                                            .+...|+.||.+.|.+++.++..   +|+++.+++|+.|++|.....       ...+
T Consensus       155 ~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~  231 (386)
T PLN02427        155 RQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVP  231 (386)
T ss_pred             ccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCccccccccccccc
Confidence                                  01236999999999999887644   589999999999999974311       0011


Q ss_pred             HHH----HHHHHhccc-------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCC
Q 044670          197 AIL----EAFLSEMGN-------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       197 ~~~----~~~~~~~~~-------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                      .++    .......+.       ..+.+++++|+|++++.++.... ...|+++++.+|
T Consensus       232 ~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~-~~~g~~yni~~~  289 (386)
T PLN02427        232 RVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPA-RANGHIFNVGNP  289 (386)
T ss_pred             hHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcc-cccCceEEeCCC
Confidence            222    222222111       11358999999999998875421 135788999876

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.88  E-value=2.8e-20  Score=165.58  Aligned_cols=216  Identities=17%  Similarity=0.114  Sum_probs=154.4

Q ss_pred             CCEEEEeCCCChHHHH--HHHHHHHcCCEEEEEecCccH---------------HHHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            3 GKVAIITGGASGIGAA--AAKLFHENGAKVVIADVQDNL---------------GQALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         3 gk~vlVTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      ||++||||+++|||.+  ++++| ++|++|+++++..+.               ..+..+..+..+..+.+|++++++++
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            6999999999999999  89999 999999888753321               22233344556778899999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCC-----------C----CC-----------------CCCCHHHHHHHHHHHhhH
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGF-----------A----SV-----------------LDTPKSDLDRVLAVNTTG  113 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~-----------~----~~-----------------~~~~~~~~~~~~~~n~~~  113 (302)
                      ++++++.+++|++|+||||+|......           +    ++                 ...+.++++.++.  ++|
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~--vMg  197 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK--VMG  197 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH--hhc
Confidence            999999999999999999999763210           0    01                 1234455555443  445


Q ss_pred             H---HHH--HHHHHHhhccCCCCEEEEEcCcccccCCCCCh--hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccC
Q 044670          114 G---FLG--AKHAARVMIPQHKGCILFTASACTEIAGIGSP--AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVS  186 (302)
Q Consensus       114 ~---~~l--~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t  186 (302)
                      .   ...  .....+.|  ..++++|-.|..++....|.+.  ..+.+|++++..++.|+.++++.|||+|++.+|.+.|
T Consensus       198 gedw~~Wi~al~~a~ll--a~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T  275 (398)
T PRK13656        198 GEDWELWIDALDEAGVL--AEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVT  275 (398)
T ss_pred             cchHHHHHHHHHhcccc--cCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccc
Confidence            4   222  33333444  3468999999988888877764  8899999999999999999999999999999999999


Q ss_pred             CcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          187 GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      .....-...+-.+...++-+    +.-+.-|.+-+-+..|.
T Consensus       276 ~Ass~Ip~~~ly~~~l~kvm----k~~g~he~~ieq~~rl~  312 (398)
T PRK13656        276 QASSAIPVMPLYISLLFKVM----KEKGTHEGCIEQIYRLF  312 (398)
T ss_pred             hhhhcCCCcHHHHHHHHHHH----HhcCCCCChHHHHHHHH
Confidence            87765544443333333322    12233444445555555

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.88  E-value=1.5e-20  Score=159.56  Aligned_cols=221  Identities=16%  Similarity=0.173  Sum_probs=158.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++||||||+|.||+|++.+|++.|++|++.+.....-.+.....  ...++.+|+.|.+.+++++++-     +||.|||
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--~~~f~~gDi~D~~~L~~vf~~~-----~idaViH   73 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--QFKFYEGDLLDRALLTAVFEEN-----KIDAVVH   73 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--cCceEEeccccHHHHHHHHHhc-----CCCEEEE
Confidence            47999999999999999999999999999987654433322211  1588999999999988888765     8999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  152 (302)
                      .||...      ...+.+...+-++.|+.|++.|++++...    +...+||.||.+.+..           ..+.++|+
T Consensus        74 FAa~~~------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG  143 (329)
T COG1087          74 FAASIS------VGESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFSSTAAVYGEPTTSPISETSPLAPINPYG  143 (329)
T ss_pred             Cccccc------cchhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEecchhhcCCCCCcccCCCCCCCCCCcch
Confidence            999643      33456677899999999999999888884    5667888887664432           12456899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCccc-----CCC----CCHHHHHHHHHhccc--------------c
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISS-----RNS----INPAILEAFLSEMGN--------------L  209 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-----~~~----~~~~~~~~~~~~~~~--------------~  209 (302)
                      .||.+.|.+.+.+++.   +++++.+++-.++.+.-..     ...    ..+-..+..+.+...              -
T Consensus       144 ~sKlm~E~iL~d~~~a---~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~  220 (329)
T COG1087         144 RSKLMSEEILRDAAKA---NPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTC  220 (329)
T ss_pred             hHHHHHHHHHHHHHHh---CCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCe
Confidence            9999999999999976   5688888876666543211     111    112222233322211              1


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccc--cEEeeCCCcc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTG--LNLVVDGGFS  246 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G--~~~~~~gG~~  246 (302)
                      .+.++++.|.|++++.++..-..  .|  +++++..|..
T Consensus       221 iRDYIHV~DLA~aH~~Al~~L~~--~g~~~~~NLG~G~G  257 (329)
T COG1087         221 IRDYIHVDDLADAHVLALKYLKE--GGSNNIFNLGSGNG  257 (329)
T ss_pred             eeeeeehhHHHHHHHHHHHHHHh--CCceeEEEccCCCc
Confidence            26789999999999888753222  23  4788777766

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.87  E-value=5.9e-21  Score=163.02  Aligned_cols=214  Identities=19%  Similarity=0.235  Sum_probs=162.7

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      ||||||+|+||.+++++|+++|+.|+...|+...........  ++.++.+|+.|.+.++++++..     .+|.|||+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~a   73 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL--NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHLA   73 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT--TEEEEESETTSHHHHHHHHHHH-----TESEEEEEB
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc--eEEEEEeecccccccccccccc-----CceEEEEee
Confidence            799999999999999999999999998888776554333322  7899999999999988888876     789999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHHHH
Q 044670           86 GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYTVS  154 (302)
Q Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~s  154 (302)
                      +...      .....+.....++.|+.++.++++++...    +..++|++||...+...           .+...|+.+
T Consensus        74 ~~~~------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   74 AFSS------NPESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             SSSS------HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             cccc------ccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccccc
Confidence            9532      11123466788999999999999998874    34789999996544332           134579999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCc---ccCCCCCHHHHHHHHHhccc-------cCCCCCCHHHHHHHHH
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGI---SSRNSINPAILEAFLSEMGN-------LRGQVLNAEGIANAAL  224 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~---~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~dva~~~~  224 (302)
                      |...+.+++.+..+.   ++++.+++|+.+++|.   .......+.++.......+.       ..+.+++++|++++++
T Consensus       144 K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~  220 (236)
T PF01370_consen  144 KRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIV  220 (236)
T ss_dssp             HHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHH
T ss_pred             ccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHH
Confidence            999999999998774   8999999999999999   22222223455555443211       1144789999999999


Q ss_pred             HhccCCCCCccccEEee
Q 044670          225 YLATDEASDVTGLNLVV  241 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~  241 (302)
                      .++....  ..|+++++
T Consensus       221 ~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  221 AALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHSC--TTTEEEEE
T ss_pred             HHHhCCC--CCCCEEEe
Confidence            9997654  46788776

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.87  E-value=5.3e-20  Score=165.83  Aligned_cols=227  Identities=16%  Similarity=0.171  Sum_probs=155.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH---HHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL---ACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|||||+|+||++++++|+++|++|++++|........   .... +.++.++.+|++|++++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            699999999999999999999999999987643322211   1122 23567889999999998877763     26999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------CCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------IGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------~~~  148 (302)
                      |||+|+.....      ...+...+.+++|+.++.++++++..    .+.+++|++||...+...            .+.
T Consensus        77 vvh~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~  146 (338)
T PRK10675         77 VIHFAGLKAVG------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_pred             EEECCcccccc------chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence            99999864321      12234467889999999999887665    356789999997543211            235


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC------CCCH---HHHHHHHHhc-cc----------
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN------SINP---AILEAFLSEM-GN----------  208 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~---~~~~~~~~~~-~~----------  208 (302)
                      ..|+.+|.+.+.+++.++++.  .++++..++|+.++++.....      ....   ..+....... ..          
T Consensus       147 ~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (338)
T PRK10675        147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_pred             ChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCC
Confidence            789999999999999987653  268888999888877631100      0011   1122222111 00          


Q ss_pred             ----cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          209 ----LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       209 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                          ..+.+++++|+|++++.++........|+++++.+|..++
T Consensus       225 ~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        225 EDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             CCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence                0135899999999998877532122246899998887644

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.87  E-value=4e-20  Score=169.22  Aligned_cols=224  Identities=15%  Similarity=0.165  Sum_probs=179.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLG-----EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||++|||||+|-||+++++++++.+. ++++.+|++.+...+..++.     .+..++-+|+.|.+.+..+++..   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            4799999999999999999999999885 58889999988877766653     56788999999999998888854   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                        ++|+++|.|+.-+-   |+-+   ..+.+.+.+|++|+.++++++..    .+..++|++|+--+..|   .+.||+|
T Consensus       325 --kvd~VfHAAA~KHV---Pl~E---~nP~Eai~tNV~GT~nv~~aa~~----~~V~~~V~iSTDKAV~P---tNvmGaT  389 (588)
T COG1086         325 --KVDIVFHAAALKHV---PLVE---YNPEEAIKTNVLGTENVAEAAIK----NGVKKFVLISTDKAVNP---TNVMGAT  389 (588)
T ss_pred             --CCceEEEhhhhccC---cchh---cCHHHHHHHhhHhHHHHHHHHHH----hCCCEEEEEecCcccCC---chHhhHH
Confidence              69999999997553   4433   34578899999999999999998    46778999999877764   5789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc------cCCCCCCHHHHHHHHHHhcc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN------LRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~s  228 (302)
                      |...|.++.+++.+....+-++.+|+-|+|.+....-   .|-+.++..+.-+-      ..+-|++..|.++.++....
T Consensus       390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSV---iPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a  466 (588)
T COG1086         390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSV---IPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGA  466 (588)
T ss_pred             HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCC---HHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHh
Confidence            9999999999998766557899999999998865432   34444444333111      11558899999999998875


Q ss_pred             CCCCCccccEEeeCCCcccC
Q 044670          229 DEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~  248 (302)
                      ...   .|+++.+|-|.++.
T Consensus       467 ~~~---gGeifvldMGepvk  483 (588)
T COG1086         467 IAK---GGEIFVLDMGEPVK  483 (588)
T ss_pred             hcC---CCcEEEEcCCCCeE
Confidence            433   69999999998843

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.87  E-value=2.2e-20  Score=169.06  Aligned_cols=218  Identities=15%  Similarity=0.118  Sum_probs=154.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVT-SEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++||||||+|+||++++++|+++ |++|++++|+......+..  ...++++.+|++ +.+.+.++++       ++|+|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~V   72 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN--HPRMHFFEGDITINKEWIEYHVK-------KCDVI   72 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc--CCCeEEEeCCCCCCHHHHHHHHc-------CCCEE
Confidence            57999999999999999999986 6999999986644332221  135889999998 6666655544       68999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----------------
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----------------  145 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------------  145 (302)
                      ||+|+....   +   ...++.+..+++|+.++.++++++..    .+ .++|++||...+...                
T Consensus        73 iH~aa~~~~---~---~~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         73 LPLVAIATP---A---TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             EECcccCCh---H---HhhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCccccccccCc
Confidence            999986432   0   11234467889999999999888875    23 589999997543211                


Q ss_pred             --CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHHHHHHHHhcc-c------
Q 044670          146 --IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAILEAFLSEMG-N------  208 (302)
Q Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~-~------  208 (302)
                        .+...|+.||.+.+.+++.++.+   +++++..++|+.+++|......        ..+.++..+....+ .      
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~  218 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGS  218 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCc
Confidence              11236999999999999988765   5899999999999998753211        01223333332211 0      


Q ss_pred             cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCC
Q 044670          209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                      ..+.+++++|++++++.++........|+.+++.++
T Consensus       219 ~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        219 QKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            114589999999999988865322235889999775

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.86  E-value=2.4e-20  Score=153.26  Aligned_cols=170  Identities=22%  Similarity=0.362  Sum_probs=130.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc---cHHHHHH---HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-KVVIADVQD---NLGQALA---CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~---~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++|||||.||||..+++.|+++|. ++++++|+.   .......   +..+.++.++.+|++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999985 799999982   1222222   233678999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      ++.|||.||....  .++.+.+.++++.++...+.|..++.+.+.+    .....+|++||+++..+.++...|+++.+.
T Consensus        82 i~gVih~ag~~~~--~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~SSis~~~G~~gq~~YaaAN~~  155 (181)
T PF08659_consen   82 IDGVIHAAGVLAD--APIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFSSISSLLGGPGQSAYAAANAF  155 (181)
T ss_dssp             EEEEEE---------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEEEHHHHTT-TTBHHHHHHHHH
T ss_pred             cceeeeeeeeecc--cccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEECChhHhccCcchHhHHHHHHH
Confidence            9999999999775  5888999999999999999999998887766    346789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGL  184 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v  184 (302)
                      ++.+++....    .|.++.+|+-|..
T Consensus       156 lda~a~~~~~----~g~~~~sI~wg~W  178 (181)
T PF08659_consen  156 LDALARQRRS----RGLPAVSINWGAW  178 (181)
T ss_dssp             HHHHHHHHHH----TTSEEEEEEE-EB
T ss_pred             HHHHHHHHHh----CCCCEEEEEcccc
Confidence            9999887653    3778888886554

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.86  E-value=3.2e-20  Score=180.97  Aligned_cols=221  Identities=12%  Similarity=0.103  Sum_probs=156.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHH-HHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE-ITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~~id   79 (302)
                      ++++||||||||+||++++++|+++ |++|++++|..........  ..+++++.+|++|.++ ++++++       ++|
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~--~~~~~~~~gDl~d~~~~l~~~l~-------~~D  384 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG--HPRFHFVEGDISIHSEWIEYHIK-------KCD  384 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC--CCceEEEeccccCcHHHHHHHhc-------CCC
Confidence            4789999999999999999999986 7999999987654332211  2367889999998655 344443       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--------------  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--------------  145 (302)
                      +|||.|+....    .  ...+..+..+++|+.++.++++++...    + .++|++||...+...              
T Consensus       385 ~ViHlAa~~~~----~--~~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T PRK08125        385 VVLPLVAIATP----I--EYTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV  453 (660)
T ss_pred             EEEECccccCc----h--hhccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence            99999996542    1  111234567899999999999998863    3 589999996543210              


Q ss_pred             -C---CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHHHHHHHHhccc-----
Q 044670          146 -I---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAILEAFLSEMGN-----  208 (302)
Q Consensus       146 -~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~-----  208 (302)
                       +   +...|+.||.+.|.+++.++.+   +|++++.++|+.+++|......        ..+.++.......+.     
T Consensus       454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~  530 (660)
T PRK08125        454 GPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDG  530 (660)
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCC
Confidence             1   1236999999999999998766   5799999999999999753211        112333333222111     


Q ss_pred             --cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          209 --LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       209 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                        ..+.+++++|++++++.++........|+++++.+|.
T Consensus       531 g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        531 GKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             CceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence              1145889999999998887643223468899998874

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.86  E-value=1.7e-19  Score=163.80  Aligned_cols=220  Identities=18%  Similarity=0.150  Sum_probs=152.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHH---HHH---HHhC--------CCeEEEEecCCCHH------
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQ---ALA---CKLG--------EDVCYIHCDVTSED------   62 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~---~~~---~~~~--------~~~~~~~~Dl~~~~------   62 (302)
                      +|+||||||+||++++++|+++|  ++|+++.|+.+...   .+.   +...        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  77999999866321   111   1110        46889999998653      


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc
Q 044670           63 EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE  142 (302)
Q Consensus        63 ~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~  142 (302)
                      ....+.       ..+|++||||+....         ...++..+++|+.++.++++.+...    +..+++++||.+..
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~---------~~~~~~~~~~nv~g~~~ll~~a~~~----~~~~~v~iSS~~v~  140 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNW---------VYPYSELRAANVLGTREVLRLAASG----RAKPLHYVSTISVL  140 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEecc---------CCcHHHHhhhhhHHHHHHHHHHhhC----CCceEEEEcccccc
Confidence            332222       279999999996431         1135678889999999999888763    34569999998765


Q ss_pred             cCCC----------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH--
Q 044670          143 IAGI----------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS--  204 (302)
Q Consensus       143 ~~~~----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--  204 (302)
                      ....                ....|+.||.+.+.+++.++.    .|+++++++||.+.++...........+.....  
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~  216 (367)
T TIGR01746       141 AAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGC  216 (367)
T ss_pred             CCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHH
Confidence            4311                134699999999999887653    389999999999999743322222222222211  


Q ss_pred             ----hcccc---CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          205 ----EMGNL---RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       205 ----~~~~~---~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                          ..+..   ...+++++|++++++.++.......+|+++++.++..+.
T Consensus       217 ~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s  267 (367)
T TIGR01746       217 LALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVS  267 (367)
T ss_pred             HHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCC
Confidence                11111   123789999999999988655433458899998865543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.85  E-value=1.1e-19  Score=177.92  Aligned_cols=226  Identities=17%  Similarity=0.131  Sum_probs=159.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCc--cHHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQD--NLGQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++|+||||||+|+||++++++|+++  |++|++++|..  +....+... ...+++++.+|++|.+.+.+++..     .
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----~   79 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----E   79 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----c
Confidence            5789999999999999999999998  68898888753  222222111 124688999999999887665532     2


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      ++|+|||+|+....      +...++..+.+++|+.++.++++++...   ...+++|++||...+...           
T Consensus        80 ~~D~ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~E~  150 (668)
T PLN02260         80 GIDTIMHFAAQTHV------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNHEA  150 (668)
T ss_pred             CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCcccc
Confidence            79999999996432      1122334577899999999999887763   125789999997543211           


Q ss_pred             ---CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-cc------CCCCCC
Q 044670          146 ---IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-NL------RGQVLN  215 (302)
Q Consensus       146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~  215 (302)
                         .+...|+.||.+.|.+++.+..+   +++++.+++|+.|++|........+.+........+ +.      .+.+++
T Consensus       151 ~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ih  227 (668)
T PLN02260        151 SQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLY  227 (668)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEE
Confidence               13457999999999999988766   489999999999999976433222333333332211 11      134789


Q ss_pred             HHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++|+|+++..++...   ..|+++++.++..+
T Consensus       228 V~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        228 CEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             HHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence            999999998887532   24788998877653

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.85  E-value=4.2e-20  Score=171.47  Aligned_cols=216  Identities=14%  Similarity=0.077  Sum_probs=150.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH-HHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-QALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++++||||||||+||++++++|+++|++|++++|..... +.....+ ..+++++..|+.++.     +.       .+|
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l~-------~~D  185 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----LL-------EVD  185 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----hc-------CCC
Confidence            578999999999999999999999999999988753221 1111111 245788888987653     21       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---------------  144 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---------------  144 (302)
                      +|||+|+....    .  ...++.++.+++|+.++.++++++...    + .++|++||...+..               
T Consensus       186 ~ViHlAa~~~~----~--~~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  254 (442)
T PLN02206        186 QIYHLACPASP----V--HYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQVETYWGNVN  254 (442)
T ss_pred             EEEEeeeecch----h--hhhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCCccccccCC
Confidence            99999986432    0  111234678999999999999988763    3 38999999765421               


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--CCCHHHHHHHHHhcccc-------CCCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--SINPAILEAFLSEMGNL-------RGQVL  214 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~  214 (302)
                       ......|+.||.+.|.+++.+.++   +++++..++|+.+++|.....  ...+.++.......+..       .+.++
T Consensus       255 P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi  331 (442)
T PLN02206        255 PIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQ  331 (442)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEE
Confidence             112457999999999999888655   479999999999999874321  11223334433322211       13478


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++|++++++.++...    .+..+++.+|..+
T Consensus       332 ~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~  360 (442)
T PLN02206        332 FVSDLVEGLMRLMEGE----HVGPFNLGNPGEF  360 (442)
T ss_pred             eHHHHHHHHHHHHhcC----CCceEEEcCCCce
Confidence            9999999998887532    2347888877653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.85  E-value=1.6e-19  Score=164.59  Aligned_cols=220  Identities=15%  Similarity=0.123  Sum_probs=154.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++|+||||||+|+||++++++|.++|++|++++|......   ........++.+|++|.+.+..++.       ++|+|
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~V   89 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM---SEDMFCHEFHLVDLRVMENCLKVTK-------GVDHV   89 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc---ccccccceEEECCCCCHHHHHHHHh-------CCCEE
Confidence            4789999999999999999999999999999998643211   1111124678899999988766664       68999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------------C
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------------A  144 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------------~  144 (302)
                      ||.|+....  ....   ..+....+..|+.++.++++++..    .+.+++|++||...+.                 +
T Consensus        90 ih~Aa~~~~--~~~~---~~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         90 FNLAADMGG--MGFI---QSNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             EEcccccCC--cccc---ccCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            999985431  0111   112245677899999999998865    3456899999964322                 1


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHh-cc-cc------CCC
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSE-MG-NL------RGQ  212 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~-~~-~~------~~~  212 (302)
                      ..+...|+.+|.+.+.+++.++..   .|+++..++|+.+++|......    ....+....... .+ ..      .+.
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~  237 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRS  237 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEe
Confidence            224558999999999999988765   5899999999999999643211    122344433321 11 11      144


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++++|+++++++++...    .++.+++.++..+
T Consensus       238 ~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        238 FTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             EEeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence            789999999998876532    2567888777663

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=1.4e-19  Score=161.01  Aligned_cols=214  Identities=20%  Similarity=0.228  Sum_probs=157.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc-cEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL-DIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i-d~lv~   83 (302)
                      .||||||+|+||++++++|.++|++|+.++|.........    ..+.++.+|+++.+.+.+.++       .. |.+||
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih   70 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----SGVEFVVLDLTDRDLVDELAK-------GVPDAVIH   70 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----cccceeeecccchHHHHHHHh-------cCCCEEEE
Confidence            4999999999999999999999999999999776554432    356788999999866555555       34 99999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------C--CChh
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------I--GSPA  150 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~--~~~~  150 (302)
                      +|+....   +....+  ..+..+++|+.++.++++++..    .+..++|+.||.+...+.           +  +...
T Consensus        71 ~aa~~~~---~~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~  141 (314)
T COG0451          71 LAAQSSV---PDSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP  141 (314)
T ss_pred             ccccCch---hhhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence            9997643   111111  3567899999999999999988    457789997775544322           1  1125


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhcc-ccC-------CCCCCHHHH
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMG-NLR-------GQVLNAEGI  219 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~-~~~-------~~~~~~~dv  219 (302)
                      |+.||.+.|.+++.+..   .+|+++.+++|+.+++|......   ....+........+ ...       +.+++++|+
T Consensus       142 Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  218 (314)
T COG0451         142 YGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDV  218 (314)
T ss_pred             HHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHH
Confidence            99999999999999997   36899999999999999877651   11222222222222 111       237889999


Q ss_pred             HHHHHHhccCCCCCccccEEeeCCCc
Q 044670          220 ANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       220 a~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++++.++.....   + .+++.++.
T Consensus       219 a~~~~~~~~~~~~---~-~~ni~~~~  240 (314)
T COG0451         219 ADALLLALENPDG---G-VFNIGSGT  240 (314)
T ss_pred             HHHHHHHHhCCCC---c-EEEeCCCC
Confidence            9999999975443   3 88888875

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.84  E-value=3.3e-20  Score=159.93  Aligned_cols=222  Identities=16%  Similarity=0.147  Sum_probs=157.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHh----C-CCeE----EEEecCCCHHHHHHHHHHHHHHc
Q 044670            6 AIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKL----G-EDVC----YIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~----~-~~~~----~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ||||||+|.||++++++|++.+ .++++++|++...-.+..++    + .++.    .+.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            7999999999999999999988 57999999999988877776    2 2343    3478999999988888755    


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                       ++|+|+|.|+.-+.   |+.+.   .+.+.+++|+.|+.++++++..+    +..++|++||--+..   +.+.||+||
T Consensus        77 -~pdiVfHaAA~KhV---pl~E~---~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~ISTDKAv~---PtnvmGatK  142 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV---PLMED---NPFEAVKTNVLGTQNVAEAAIEH----GVERFVFISTDKAVN---PTNVMGATK  142 (293)
T ss_dssp             -T-SEEEE------H---HHHCC---CHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEEECGCSS-----SHHHHHH
T ss_pred             -CCCEEEEChhcCCC---ChHHh---CHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEccccccCC---CCcHHHHHH
Confidence             79999999997553   33333   35678999999999999999984    577999999987765   457899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc------cCCCCCCHHHHHHHHHHhccC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN------LRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ..+|.++.+++......+.++.+|+-|+|.+....   ..+-+.++..+..+-      ..+-+++++|.++.++..+..
T Consensus       143 rlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS---Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~  219 (293)
T PF02719_consen  143 RLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS---VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL  219 (293)
T ss_dssp             HHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS---CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc---HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh
Confidence            99999999999877666799999999999875432   234455555443221      115588999999999888754


Q ss_pred             CCCCccccEEeeCCCcccCCCC
Q 044670          230 EASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      ..   .|+++..|-|.++.-.+
T Consensus       220 ~~---~geifvl~mg~~v~I~d  238 (293)
T PF02719_consen  220 AK---GGEIFVLDMGEPVKILD  238 (293)
T ss_dssp             -----TTEEEEE---TCEECCC
T ss_pred             CC---CCcEEEecCCCCcCHHH
Confidence            33   59999999998876555

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.84  E-value=3.9e-19  Score=159.01  Aligned_cols=226  Identities=15%  Similarity=0.109  Sum_probs=155.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ++|||||+|+||++++++|+++|++|++++|.............  ..++++.+|+++++++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999999988764433222212111  1567889999999998887763     3799999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAY  151 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  151 (302)
                      |+||....      ....++..+.+++|+.++..+++++.+    .+.+++|++||...+...           .+...|
T Consensus        76 ~~ag~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y  145 (328)
T TIGR01179        76 HFAGLIAV------GESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY  145 (328)
T ss_pred             ECccccCc------chhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence            99996532      112334567889999999999887665    345789999986543211           134679


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-----CCCHHHHHHH---HH-hcc---------c-----
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-----SINPAILEAF---LS-EMG---------N-----  208 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~---~~-~~~---------~-----  208 (302)
                      +.+|++++.+++.++++.  .++++++++|+.++++.....     ......+..+   .. ...         +     
T Consensus       146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  223 (328)
T TIGR01179       146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGT  223 (328)
T ss_pred             HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCc
Confidence            999999999999987652  479999999999999853211     0011122111   11 100         0     


Q ss_pred             cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ....+++++|++++++.++........|+++++.++..+
T Consensus       224 ~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       224 CVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence            013478999999999988753222235788999877654

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.84  E-value=2e-19  Score=160.09  Aligned_cols=215  Identities=13%  Similarity=0.132  Sum_probs=147.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH--HcCCccEEEE
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVA--KYGKLDIMYN   83 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~id~lv~   83 (302)
                      ||||||+|+||++++++|+++|++++++.|+........       .+..+|++|..+.+.+++.+.+  .++++|+|||
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih   74 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFV-------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFH   74 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHH-------hhhhhhhhhhhhHHHHHHHHhcccccCCccEEEE
Confidence            799999999999999999999997777665543221111       1234577777666666665543  2457999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  152 (302)
                      +|+....   .  ...   .+..+++|+.++.++++++...    + .++|++||.+.+...           .+...|+
T Consensus        75 ~A~~~~~---~--~~~---~~~~~~~n~~~t~~ll~~~~~~----~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         75 EGACSST---T--EWD---GKYMMDNNYQYSKELLHYCLER----E-IPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             CceecCC---c--CCC---hHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            9985432   1  111   2457899999999999998763    3 369999997543321           1346799


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH----HHHHHHHHhccc-c-------CCCCCCHHHHH
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP----AILEAFLSEMGN-L-------RGQVLNAEGIA  220 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~-~-------~~~~~~~~dva  220 (302)
                      .||.+.+.+++.+..+   .++++.+++|+.+++|.........    .+.........+ +       .+.+++++|++
T Consensus       142 ~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a  218 (308)
T PRK11150        142 YSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVA  218 (308)
T ss_pred             HHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHH
Confidence            9999999999888755   4799999999999998764422111    121223222111 1       13578999999


Q ss_pred             HHHHHhccCCCCCccccEEeeCCCccc
Q 044670          221 NAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       221 ~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++++.++...    .+.++++.+|..+
T Consensus       219 ~a~~~~~~~~----~~~~yni~~~~~~  241 (308)
T PRK11150        219 AVNLWFWENG----VSGIFNCGTGRAE  241 (308)
T ss_pred             HHHHHHHhcC----CCCeEEcCCCCce
Confidence            9998887542    2458998877764

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.83  E-value=1.6e-19  Score=167.28  Aligned_cols=216  Identities=14%  Similarity=0.066  Sum_probs=150.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.++||||||+|+||++++++|+++|++|++++|.... ........ ..+++++..|+.+..     +.       ++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~~-------~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----LL-------EVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----cc-------CCC
Confidence            35789999999999999999999999999999875432 11121111 135778888887642     21       689


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---------------  144 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---------------  144 (302)
                      +|||+|+.....  .    ...+..+.+++|+.++.+++.++...    + .++|++||.+.+..               
T Consensus       187 ~ViHlAa~~~~~--~----~~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~  255 (436)
T PLN02166        187 QIYHLACPASPV--H----YKYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQKETYWGNVN  255 (436)
T ss_pred             EEEECceeccch--h----hccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCCccccccCC
Confidence            999999864321  1    11234688999999999999988874    2 37999998764321               


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--CCCHHHHHHHHHhcccc-------CCCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--SINPAILEAFLSEMGNL-------RGQVL  214 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~-------~~~~~  214 (302)
                       ..+...|+.||.+.|.+++.+.+.   +++++.+++|+.+++|.....  .....++.......+..       .+.++
T Consensus       256 p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi  332 (436)
T PLN02166        256 PIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQ  332 (436)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeE
Confidence             112356999999999999988765   479999999999999875321  11233444444332211       14589


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++|+++++..++...    .+.++++.+|..+
T Consensus       333 ~V~Dva~ai~~~~~~~----~~giyNIgs~~~~  361 (436)
T PLN02166        333 YVSDLVDGLVALMEGE----HVGPFNLGNPGEF  361 (436)
T ss_pred             EHHHHHHHHHHHHhcC----CCceEEeCCCCcE
Confidence            9999999998887532    2348888777653

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.83  E-value=1.4e-18  Score=150.21  Aligned_cols=211  Identities=17%  Similarity=0.171  Sum_probs=137.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id~   80 (302)
                      ++++++||||||+||++++++|+++|++|+++.|+.+........ +..+.++.+|++|. +++.+.+.      .++|+
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~l~~~~~------~~~d~   88 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ-DPSLQIVRADVTEGSDKLVEAIG------DDSDA   88 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc-CCceEEEEeeCCCCHHHHHHHhh------cCCCE
Confidence            578999999999999999999999999999999987765443321 23588899999983 33322220      26999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc---CCCCChhHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI---AGIGSPAYTVSKYG  157 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~---~~~~~~~Y~~sK~a  157 (302)
                      ||+++|.... ..+         ...+++|+.++.++++++..    .+.++||++||.+.+.   +.+....|...|..
T Consensus        89 vi~~~g~~~~-~~~---------~~~~~~n~~~~~~ll~a~~~----~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~  154 (251)
T PLN00141         89 VICATGFRRS-FDP---------FAPWKVDNFGTVNLVEACRK----AGVTRFILVSSILVNGAAMGQILNPAYIFLNLF  154 (251)
T ss_pred             EEECCCCCcC-CCC---------CCceeeehHHHHHHHHHHHH----cCCCEEEEEccccccCCCcccccCcchhHHHHH
Confidence            9999986321 011         11246788888888888754    4568999999986432   22233457666654


Q ss_pred             HHHHHHHHHHH--HCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          158 IIALVKILAAE--LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       158 ~~~~~~~la~e--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ...+...+..|  +...|+++++|+||++.++........        .....+....++++|+|+.++.++..+..  .
T Consensus       155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~--------~~~~~~~~~~i~~~dvA~~~~~~~~~~~~--~  224 (251)
T PLN00141        155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM--------EPEDTLYEGSISRDQVAEVAVEALLCPES--S  224 (251)
T ss_pred             HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE--------CCCCccccCcccHHHHHHHHHHHhcChhh--c
Confidence            44333222222  355799999999999987653211100        00000113468999999999999865332  2


Q ss_pred             ccEEeeCC
Q 044670          236 GLNLVVDG  243 (302)
Q Consensus       236 G~~~~~~g  243 (302)
                      +.++.+.+
T Consensus       225 ~~~~~~~~  232 (251)
T PLN00141        225 YKVVEIVA  232 (251)
T ss_pred             CcEEEEec
Confidence            44444444

>PRK06720 hypothetical protein; Provisional

Probab=99.82  E-value=7.4e-19  Score=142.31  Aligned_cols=139  Identities=22%  Similarity=0.447  Sum_probs=111.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+++||||++|||+++++.|+++|++|++++|+.+..+...+++   +....++.+|+++.++++++++++.+.+|+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999877665544433   456778899999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-------CCCEEEEEcCccccc
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-------HKGCILFTASACTEI  143 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~iv~~sS~~~~~  143 (302)
                      +|++|||||..... .++.+.+.++ ++  .+|+.+++..++.+.+.|+++       +.||+..+||.+...
T Consensus        94 iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         94 IDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            99999999986532 3444444444 33  667778888999999887654       468888888876543

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.82  E-value=2.3e-18  Score=153.48  Aligned_cols=218  Identities=16%  Similarity=0.157  Sum_probs=149.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            6 AIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ||||||+|+||++++++|.++|+ .|++++|..... ... ...  ...+..|+.+.+.++.+.+.   .+.++|+|||+
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh~   73 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLA--DLVIADYIDKEDFLDRLEKG---AFGKIEAIFHQ   73 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhh--heeeeccCcchhHHHHHHhh---ccCCCCEEEEC
Confidence            68999999999999999999998 688877654322 111 111  13466788887776555442   23579999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCChhHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSPAYTV  153 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~~  153 (302)
                      |+....        ..++.+..+++|+.++.++++++...    + .++|++||.+.+..           ..+...|+.
T Consensus        74 A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        74 GACSDT--------TETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             ccccCc--------cccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            996321        12345778999999999999988763    2 37999999764431           124568999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH----HHHHHHHHhccc-c------------CCCCCCH
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP----AILEAFLSEMGN-L------------RGQVLNA  216 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~----~~~~~~~~~~~~-~------------~~~~~~~  216 (302)
                      ||.+.+.+++....+.. .++++..++|+.+++|.........    .+.......... +            .+.++++
T Consensus       141 sK~~~e~~~~~~~~~~~-~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  219 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEA-LSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV  219 (314)
T ss_pred             HHHHHHHHHHHHhHhhc-cCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence            99999999987543322 2578999999999998754321111    222222221111 1            1358899


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +|+++++..++.. .   .+.++++.++..++
T Consensus       220 ~D~a~~i~~~~~~-~---~~~~yni~~~~~~s  247 (314)
T TIGR02197       220 KDVVDVNLWLLEN-G---VSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHHhc-c---cCceEEcCCCCCcc
Confidence            9999999988864 1   45688888876643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.81  E-value=2e-18  Score=153.22  Aligned_cols=205  Identities=16%  Similarity=0.170  Sum_probs=144.9

Q ss_pred             EEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 044670            7 IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus         7 lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      |||||||+||+++++.|+++|++|+++.+.                 ..+|++|.++++++++..     ++|+|||+|+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A~   58 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------KELDLTRQADVEAFFAKE-----KPTYVILAAA   58 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------ccCCCCCHHHHHHHHhcc-----CCCEEEEeee
Confidence            699999999999999999999998766432                 247999999988877653     6899999998


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------------C--C-Chh
Q 044670           87 IVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------------I--G-SPA  150 (302)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------------~--~-~~~  150 (302)
                      ....   .  ....+..+..+++|+.++.++++++...    +.+++|++||...+.+.             +  + ...
T Consensus        59 ~~~~---~--~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         59 KVGG---I--HANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eecc---c--chhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            6421   0  0111234567889999999999998873    45689999997543211             1  1 225


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCHHHHHHHHH----hcc--------ccCCCCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLS----EMG--------NLRGQVL  214 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~----~~~--------~~~~~~~  214 (302)
                      |+.||.+.+.+++.+.++   +++++++++|+.+++|.....    ...+..+..+..    ..+        ...+.++
T Consensus       130 Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i  206 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQ---YGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFL  206 (306)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccc
Confidence            999999999999888766   479999999999999974311    112333333221    111        1114689


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +++|++++++.++....   .++.+++.+|..++
T Consensus       207 ~v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s  237 (306)
T PLN02725        207 HVDDLADAVVFLMRRYS---GAEHVNVGSGDEVT  237 (306)
T ss_pred             cHHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence            99999999998886432   24566888776643

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.81  E-value=2.3e-18  Score=153.98  Aligned_cols=203  Identities=12%  Similarity=0.059  Sum_probs=144.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +|+||||||+||++++++|+++|++|++++|+.+....+..   ..++++.+|++|++++.++++       .+|+|||+
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~---~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~~   71 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKE---WGAELVYGDLSLPETLPPSFK-------GVTAIIDA   71 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhh---cCCEEEECCCCCHHHHHHHHC-------CCCEEEEC
Confidence            79999999999999999999999999999998655433221   357899999999999887776       78999998


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI  164 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (302)
                      ++....           +....+++|+.++.++++++..    .+..++|++||.....  .+...|..+|...+.+.+ 
T Consensus        72 ~~~~~~-----------~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~l~-  133 (317)
T CHL00194         72 STSRPS-----------DLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ--YPYIPLMKLKSDIEQKLK-  133 (317)
T ss_pred             CCCCCC-----------CccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc--cCCChHHHHHHHHHHHHH-
Confidence            763211           1234667889999998888876    3567999999864332  123568899988776653 


Q ss_pred             HHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc------ccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG------NLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       165 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                            ..+++++.++|+.++.......      ........+      .....+++++|+|+++..++..+.  ..|++
T Consensus       134 ------~~~l~~tilRp~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~  199 (317)
T CHL00194        134 ------KSGIPYTIFRLAGFFQGLISQY------AIPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKT  199 (317)
T ss_pred             ------HcCCCeEEEeecHHhhhhhhhh------hhhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcE
Confidence                  2479999999987764422111      000111000      001346789999999988886433  25899


Q ss_pred             EeeCCCcccCC
Q 044670          239 LVVDGGFSVAN  249 (302)
Q Consensus       239 ~~~~gG~~~~~  249 (302)
                      +++.|+..++.
T Consensus       200 ~ni~g~~~~s~  210 (317)
T CHL00194        200 FPLVGPKSWNS  210 (317)
T ss_pred             EEecCCCccCH
Confidence            99998876543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.80  E-value=5.3e-18  Score=149.32  Aligned_cols=199  Identities=20%  Similarity=0.130  Sum_probs=141.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ++|||||||+||.+++++|+++|++|+++.|.                  .+|+.++++++++++..     ++|++||+
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------~~d~~~~~~~~~~~~~~-----~~d~vi~~   57 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------QLDLTDPEALERLLRAI-----RPDAVVNT   57 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------ccCCCCHHHHHHHHHhC-----CCCEEEEC
Confidence            37999999999999999999999999999874                  46999999988887753     68999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYTV  153 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  153 (302)
                      |+....      .......+..+++|+.++.++++++...    + .++|++||...+.+.           .+...|+.
T Consensus        58 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~  126 (287)
T TIGR01214        58 AAYTDV------DGAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQ  126 (287)
T ss_pred             Cccccc------cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhH
Confidence            996432      1112235678899999999999987652    2 489999986543221           13457999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHhcc
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s  228 (302)
                      +|.+.|.+++.+       +.++++++|+.++++...... ...+........+.     ..+.+++++|+++++..++.
T Consensus       127 ~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~  198 (287)
T TIGR01214       127 SKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQ  198 (287)
T ss_pred             HHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHh
Confidence            999999888765       468899999999998742211 11222222221110     11346789999999999885


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      ...  ..++++++.++..+
T Consensus       199 ~~~--~~~~~~ni~~~~~~  215 (287)
T TIGR01214       199 RLA--RARGVYHLANSGQC  215 (287)
T ss_pred             hcc--CCCCeEEEECCCCc
Confidence            431  13567777665543

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.79  E-value=1.7e-17  Score=152.09  Aligned_cols=213  Identities=11%  Similarity=0.092  Sum_probs=149.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH------HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ------ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++++++||||||+||++++++|+++|++|+++.|+.+...      .... ....++++.+|++|++++.++++..   .
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            5789999999999999999999999999999999875432      1111 1246789999999999988887643   1


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||++....   .        ....+++|+.++.++++++..    .+.+++|++||.....   +...|..+|
T Consensus       135 ~~~D~Vi~~aa~~~~---~--------~~~~~~vn~~~~~~ll~aa~~----~gv~r~V~iSS~~v~~---p~~~~~~sK  196 (390)
T PLN02657        135 DPVDVVVSCLASRTG---G--------VKDSWKIDYQATKNSLDAGRE----VGAKHFVLLSAICVQK---PLLEFQRAK  196 (390)
T ss_pred             CCCcEEEECCccCCC---C--------CccchhhHHHHHHHHHHHHHH----cCCCEEEEEeeccccC---cchHHHHHH
Confidence            168999999984221   0        123456788888888888765    4567999999986543   355789999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-cC-------CCCCCHHHHHHHHHHhc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-LR-------GQVLNAEGIANAALYLA  227 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~dva~~~~~l~  227 (302)
                      ...+...+.     ...+++.++++|+.++++..       ..+.......+. +.       ..+++++|+|.+++.++
T Consensus       197 ~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~-------~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~  264 (390)
T PLN02657        197 LKFEAELQA-----LDSDFTYSIVRPTAFFKSLG-------GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCV  264 (390)
T ss_pred             HHHHHHHHh-----ccCCCCEEEEccHHHhcccH-------HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHH
Confidence            988877654     23589999999998875431       111111111110 00       12578999999998888


Q ss_pred             cCCCCCccccEEeeCC-CcccCCC
Q 044670          228 TDEASDVTGLNLVVDG-GFSVANP  250 (302)
Q Consensus       228 s~~~~~~~G~~~~~~g-G~~~~~~  250 (302)
                      .++.  ..|+++++.| +..++..
T Consensus       265 ~~~~--~~~~~~~Iggp~~~~S~~  286 (390)
T PLN02657        265 LDES--KINKVLPIGGPGKALTPL  286 (390)
T ss_pred             hCcc--ccCCEEEcCCCCcccCHH
Confidence            5432  2578898876 3444433

>PLN02996 fatty acyl-CoA reductase

Probab=99.77  E-value=3.8e-17  Score=153.69  Aligned_cols=224  Identities=17%  Similarity=0.118  Sum_probs=151.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccH---HHHHH-------------HHh--------CCCeEE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNL---GQALA-------------CKL--------GEDVCY   53 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~---~~~~~-------------~~~--------~~~~~~   53 (302)
                      ++||+|+||||||+||.++++.|++.+.   +|++..|..+.   .+.+.             +..        ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            4799999999999999999999998653   57888886531   11111             000        156899


Q ss_pred             EEecCCC-------HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc
Q 044670           54 IHCDVTS-------EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI  126 (302)
Q Consensus        54 ~~~Dl~~-------~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  126 (302)
                      +.+|+++       .+.++++++       .+|+|||+|+....         .+..+..+++|+.|+.++++++...  
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~---------~~~~~~~~~~Nv~gt~~ll~~a~~~--  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF---------DERYDVALGINTLGALNVLNFAKKC--  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC---------cCCHHHHHHHHHHHHHHHHHHHHhc--
Confidence            9999984       444444444       68999999996431         1245778999999999999988763  


Q ss_pred             cCCCCEEEEEcCcccccCCC------------------------------------------------------------
Q 044670          127 PQHKGCILFTASACTEIAGI------------------------------------------------------------  146 (302)
Q Consensus       127 ~~~~~~iv~~sS~~~~~~~~------------------------------------------------------------  146 (302)
                       .+..++|++||........                                                            
T Consensus       151 -~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (491)
T PLN02996        151 -VKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKL  229 (491)
T ss_pred             -CCCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHh
Confidence             2345899999876442210                                                            


Q ss_pred             --CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-------HHHHHHHHHhccc-------cC
Q 044670          147 --GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-------PAILEAFLSEMGN-------LR  210 (302)
Q Consensus       147 --~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~-------~~  210 (302)
                        ....|+.||++.|.+++..+     .++++.+++|+.|.++...+....       ......+......       ..
T Consensus       230 ~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        230 HGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             CCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence              11359999999999997653     389999999999999875442110       1121111221111       12


Q ss_pred             CCCCCHHHHHHHHHHhccCCC-CCccccEEeeCCC--cccC
Q 044670          211 GQVLNAEGIANAALYLATDEA-SDVTGLNLVVDGG--FSVA  248 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~-~~~~G~~~~~~gG--~~~~  248 (302)
                      +.+++++|++++++.++.... ..-.++++++.+|  ..++
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~~~~~~s  345 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSSLKNPVK  345 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCCCCCccc
Confidence            568899999999987775321 1124688999888  5543

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.77  E-value=2.7e-17  Score=145.88  Aligned_cols=148  Identities=14%  Similarity=0.109  Sum_probs=113.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++||||||+|+||++++++|+++| +|+.++|...              .+.+|++|.+++.++++..     ++|+|||
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~--------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vih   60 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST--------------DYCGDFSNPEGVAETVRKI-----RPDVIVN   60 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc--------------cccCCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            379999999999999999999999 7888877521              2457999999988877753     6899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  152 (302)
                      +|+....      +...++.+..+++|+.++.++++++...    + .++|++||...+.+.           .+...|+
T Consensus        61 ~Aa~~~~------~~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg  129 (299)
T PRK09987         61 AAAHTAV------DKAESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYG  129 (299)
T ss_pred             CCccCCc------chhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccceEECCCCCCCcCCCCCCCCCCHHH
Confidence            9996542      1122234677889999999999988873    2 479999986543211           1345799


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS  189 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  189 (302)
                      .||.+.|.+++.+.       .+...++|+++++|..
T Consensus       130 ~sK~~~E~~~~~~~-------~~~~ilR~~~vyGp~~  159 (299)
T PRK09987        130 ETKLAGEKALQEHC-------AKHLIFRTSWVYAGKG  159 (299)
T ss_pred             HHHHHHHHHHHHhC-------CCEEEEecceecCCCC
Confidence            99999999887654       1358999999999864

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.75  E-value=3.5e-16  Score=153.13  Aligned_cols=221  Identities=19%  Similarity=0.156  Sum_probs=147.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHH--HcCCEEEEEecCccH--HHHHHHHhC-CCeEEEEecCCCHHHH--HHHHHHHHHHcC
Q 044670            4 KVAIITGGASGIGAAAAKLFH--ENGAKVVIADVQDNL--GQALACKLG-EDVCYIHCDVTSEDEI--TNLVDTAVAKYG   76 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~--~~G~~V~~~~r~~~~--~~~~~~~~~-~~~~~~~~Dl~~~~~v--~~~~~~~~~~~~   76 (302)
                      ++||||||||+||++++++|+  .+|++|++++|+...  ...+....+ .+++++.+|++|++.-  ...++++    .
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            379999999999999999999  589999999996543  222222222 4688999999985310  1112222    2


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      ++|+|||+|+....      ..   ..+..+++|+.++.++++++..    .+..++|++||.......           
T Consensus        77 ~~D~Vih~Aa~~~~------~~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         77 DIDHVVHLAAIYDL------TA---DEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCCEEEECceeecC------CC---CHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchh
Confidence            79999999996432      11   2356778999999999888766    345789999987654221           


Q ss_pred             --CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHH---hccc---c-----
Q 044670          146 --IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLS---EMGN---L-----  209 (302)
Q Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~---~~~~---~-----  209 (302)
                        .....|+.||...|.+++.      ..|+++++++|+.|+++......   ...........   ..+.   .     
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence              1234699999999988763      24899999999999997532211   01111111111   1110   0     


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          210 -RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       210 -~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                       ...+++++|+++++..++..+  ...|+++++.++..+..
T Consensus       218 ~~~~~v~vddva~ai~~~~~~~--~~~g~~~ni~~~~~~s~  256 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHKD--GRDGQTFHLTDPKPQRV  256 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcCc--CCCCCEEEeCCCCCCcH
Confidence             023678999999999887532  24689999988766543

>PRK05865 hypothetical protein; Provisional

Probab=99.74  E-value=2.8e-16  Score=154.13  Aligned_cols=183  Identities=14%  Similarity=0.095  Sum_probs=134.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++||||+|+||++++++|+++|++|++++|+....      ....+.++.+|++|.+++.++++       .+|+|||
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~~~~v~~v~gDL~D~~~l~~al~-------~vD~VVH   67 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------WPSSADFIAADIRDATAVESAMT-------GADVVAH   67 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------cccCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            3799999999999999999999999999999875321      12357889999999999888776       6899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      +|+...    +           .+++|+.++.++++++..    .+.+++|++||..              |.+.|.+++
T Consensus        68 lAa~~~----~-----------~~~vNv~GT~nLLeAa~~----~gvkr~V~iSS~~--------------K~aaE~ll~  114 (854)
T PRK05865         68 CAWVRG----R-----------NDHINIDGTANVLKAMAE----TGTGRIVFTSSGH--------------QPRVEQMLA  114 (854)
T ss_pred             CCCccc----c-----------hHHHHHHHHHHHHHHHHH----cCCCeEEEECCcH--------------HHHHHHHHH
Confidence            998421    1           467899999988777655    4567999999863              877776663


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc------CCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL------RGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                          +   +++++++++|+++++|..      +.+...........      ...+++++|+++++..++....  ..|.
T Consensus       115 ----~---~gl~~vILRp~~VYGP~~------~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~--~~gg  179 (854)
T PRK05865        115 ----D---CGLEWVAVRCALIFGRNV------DNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV--IDSG  179 (854)
T ss_pred             ----H---cCCCEEEEEeceEeCCCh------HHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC--cCCC
Confidence                2   489999999999999852      12222222110000      1247899999999988874322  2356


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .+++.+|..+
T Consensus       180 vyNIgsg~~~  189 (854)
T PRK05865        180 PVNLAAPGEL  189 (854)
T ss_pred             eEEEECCCcc
Confidence            7888877654

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.73  E-value=1.3e-16  Score=141.50  Aligned_cols=224  Identities=20%  Similarity=0.164  Sum_probs=162.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccH--HHHH-HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNL--GQAL-ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~--~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +..+++||||+|++|++++++|.+.+  .++.+++..+..  .... ....+..+.++.+|+.|..++.++++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            57899999999999999999999998  788888876642  1111 11135788999999999999888877       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------  146 (302)
                      +. .+||+|+...      ......+.+..+++|+.|+.+++.++..    .+..++|++||.....+..          
T Consensus        76 ~~-~Vvh~aa~~~------~~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p  144 (361)
T KOG1430|consen   76 GA-VVVHCAASPV------PDFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESLP  144 (361)
T ss_pred             Cc-eEEEeccccC------ccccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCCC
Confidence            67 7777776432      2333346788999999999999999988    4678999999987654422          


Q ss_pred             ----CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-------ccCCCCCC
Q 044670          147 ----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-------NLRGQVLN  215 (302)
Q Consensus       147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  215 (302)
                          ....|+.||+-.|.+++....   ..+...++++|..|+||......  +...........       ...-.+..
T Consensus       145 ~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~--~~i~~~~~~g~~~f~~g~~~~~~~~~~  219 (361)
T KOG1430|consen  145 YPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLL--PKIVEALKNGGFLFKIGDGENLNDFTY  219 (361)
T ss_pred             CccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCcccc--HHHHHHHHccCceEEeeccccccceEE
Confidence                124799999999999888773   45789999999999999887653  333332222110       01133556


Q ss_pred             HHHHHHHHHHhcc---CCCCCccccEEeeCCCcccC
Q 044670          216 AEGIANAALYLAT---DEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       216 ~~dva~~~~~l~s---~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .+-++.+++.+..   +.....+||.++++.|....
T Consensus       220 ~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  220 GENVAWAHILAARALLDKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             echhHHHHHHHHHHHHhcCCccCceEEEEeCCCcch
Confidence            6667766654432   25567899999999988754

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.71  E-value=1.2e-16  Score=140.67  Aligned_cols=245  Identities=16%  Similarity=0.096  Sum_probs=148.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +++|||||+|.||.++.++|.++|++|+.+.|.                  .+|++|.+++.+++++.     ++|+|||
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------~~dl~d~~~~~~~~~~~-----~pd~Vin   57 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------DLDLTDPEAVAKLLEAF-----KPDVVIN   57 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------CS-TTSHHHHHHHHHHH-------SEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------hcCCCCHHHHHHHHHHh-----CCCeEec
Confidence            379999999999999999999999999998775                  57999999999888876     7999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~  152 (302)
                      +|++...      +...++.+..+++|+.++.++.+.+...     +.++|++||...+.+..           +...|+
T Consensus        58 ~aa~~~~------~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG  126 (286)
T PF04321_consen   58 CAAYTNV------DACEKNPEEAYAINVDATKNLAEACKER-----GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYG  126 (286)
T ss_dssp             ------H------HHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHH
T ss_pred             cceeecH------HhhhhChhhhHHHhhHHHHHHHHHHHHc-----CCcEEEeeccEEEcCCcccccccCCCCCCCCHHH
Confidence            9996431      1223456789999999999999999873     46899999976554321           346899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-----ccCCCCCCHHHHHHHHHHhc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-----NLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~  227 (302)
                      .+|+..|..++...       -...++++++++++... . ....+.........     ...+...+++|+|+.+..++
T Consensus       127 ~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~~~~-~-~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~  197 (286)
T PF04321_consen  127 RSKLEGEQAVRAAC-------PNALILRTSWVYGPSGR-N-FLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELI  197 (286)
T ss_dssp             HHHHHHHHHHHHH--------SSEEEEEE-SEESSSSS-S-HHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhc-------CCEEEEecceecccCCC-c-hhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHH
Confidence            99999998888733       27789999999998211 1 11222222222111     11134678999999999998


Q ss_pred             cCCCC-CccccEEeeCCCcccCC--------------C-C--------ccccCCCccceeeccCCccccchhHHHHHHHH
Q 044670          228 TDEAS-DVTGLNLVVDGGFSVAN--------------P-S--------LMKFASPFHLIKAIGDGCRSFLGISFIAMMCL  283 (302)
Q Consensus       228 s~~~~-~~~G~~~~~~gG~~~~~--------------~-~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  283 (302)
                      ..... .....++.+.|...++.              . .        ....+..+....-.-++....+|+...+++++
T Consensus       198 ~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~~~~~~  277 (286)
T PF04321_consen  198 EKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPPPWREG  277 (286)
T ss_dssp             HHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS---BHHHH
T ss_pred             HhcccccccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCcCHHHH
Confidence            64321 11235677766665321              0 1        10001111111111222345568888888988


Q ss_pred             HHhhhhcc
Q 044670          284 IHKIQKVI  291 (302)
Q Consensus       284 ~~~~~~~~  291 (302)
                      +...++++
T Consensus       278 l~~~~~~~  285 (286)
T PF04321_consen  278 LEELVKQY  285 (286)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            88877654

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.68  E-value=4.8e-16  Score=130.72  Aligned_cols=223  Identities=16%  Similarity=0.104  Sum_probs=164.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCc--cHHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG--AKVVIADVQD--NLGQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.++||||.|+||.+.+..+...=  ++.+..+.-.  ..+..+.+. ...+..++..|+.+...+.-++..     .++
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~~i   81 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----EEI   81 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhcc-----Cch
Confidence            689999999999999999999853  4444432210  012222111 136789999999999987776653     389


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------C
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------I  146 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------~  146 (302)
                      |.|+|-|+-.+      .+.+.-+.-.....|++++..|+..+.-..   +..++|++|+...+...            .
T Consensus        82 d~vihfaa~t~------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~n  152 (331)
T KOG0747|consen   82 DTVIHFAAQTH------VDRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLN  152 (331)
T ss_pred             hhhhhhHhhhh------hhhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCC
Confidence            99999998543      233333445678889999999999988864   45789999986544321            2


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc-------CCCCCCHHHH
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-------RGQVLNAEGI  219 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dv  219 (302)
                      +...|++||+|.|++.+++.+.   +|+.+..++-+.|+||.+......+.+++......+.+       .+.++.++|+
T Consensus       153 PtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~  229 (331)
T KOG0747|consen  153 PTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDV  229 (331)
T ss_pred             CCCchHHHHHHHHHHHHHHhhc---cCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHH
Confidence            4568999999999999999966   68999999999999999988877777776544432211       1458899999


Q ss_pred             HHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          220 ANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       220 a~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++++-.++....   .||++++..-+.
T Consensus       230 ~ea~~~v~~Kg~---~geIYNIgtd~e  253 (331)
T KOG0747|consen  230 SEAFKAVLEKGE---LGEIYNIGTDDE  253 (331)
T ss_pred             HHHHHHHHhcCC---ccceeeccCcch
Confidence            999987776532   599999876665

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.68  E-value=1.2e-15  Score=131.78  Aligned_cols=163  Identities=17%  Similarity=0.121  Sum_probs=101.2

Q ss_pred             EeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHH---HHH-------------HhCCCeEEEEecCCCHH--HHHHH
Q 044670            8 ITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQA---LAC-------------KLGEDVCYIHCDVTSED--EITNL   67 (302)
Q Consensus         8 VTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~---~~~-------------~~~~~~~~~~~Dl~~~~--~v~~~   67 (302)
                      ||||||+||.++.++|++++.  +|++..|..+....   +.+             ....+++++.+|++++.  --.+.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  89999998754221   211             12578999999999853  00111


Q ss_pred             HHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--
Q 044670           68 VDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--  145 (302)
Q Consensus        68 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--  145 (302)
                      .+++.+   .+|+|||+|+.....         ..+++.+++|+.|+.++++.+..    .+..+++++||.......  
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~---------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~~~  144 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN---------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSRPG  144 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-TT
T ss_pred             hhcccc---ccceeeecchhhhhc---------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCCCC
Confidence            233322   589999999975421         13456888999999999998884    223489999993221111  


Q ss_pred             ------------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc
Q 044670          146 ------------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS  189 (302)
Q Consensus       146 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  189 (302)
                                        .....|..||...|.+++..+.+   .|+++.+++||.|.+...
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~~~  203 (249)
T PF07993_consen  145 TIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGDSR  203 (249)
T ss_dssp             T--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-SSS
T ss_pred             cccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccccCC
Confidence                              12247999999999999998876   489999999999998433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.68  E-value=1.4e-15  Score=130.66  Aligned_cols=225  Identities=17%  Similarity=0.221  Sum_probs=151.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH----HHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL----GQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++||||||+|+||+|++.+|+++|+.|++++.-...    +........  ..+.++..|++|.+.++++++..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            6899999999999999999999999999998754332    222333333  67999999999999988888766     


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------C
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------G  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~  145 (302)
                      ++|.|+|.|+....      ..+.+.....+..|+.|+++++..+..+    +-..+|+.||.+.+..           .
T Consensus        77 ~fd~V~Hfa~~~~v------geS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssatvYG~p~~ip~te~~~t  146 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV------GESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSATVYGLPTKVPITEEDPT  146 (343)
T ss_pred             CCceEEeehhhhcc------chhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEecceeeecCcceeeccCcCCC
Confidence            79999999996443      2344555788999999999998888874    3567888888764431           1


Q ss_pred             C-CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccC--Cccc--------CCCCCHHHHHHHHHh---------
Q 044670          146 I-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVS--GISS--------RNSINPAILEAFLSE---------  205 (302)
Q Consensus       146 ~-~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t--~~~~--------~~~~~~~~~~~~~~~---------  205 (302)
                      . +.+.|+.+|.+++...+.+...+   +..+..++-..+.+  |..+        +....+....-.+..         
T Consensus       147 ~~p~~pyg~tK~~iE~i~~d~~~~~---~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~  223 (343)
T KOG1371|consen  147 DQPTNPYGKTKKAIEEIIHDYNKAY---GWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGR  223 (343)
T ss_pred             CCCCCcchhhhHHHHHHHHhhhccc---cceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecC
Confidence            1 56789999999999999988664   35555555443333  1111        011111000001110         


Q ss_pred             -----ccccCCCCCCHHHHHHHHHHhccCCCC-CccccEEeeCCCcc
Q 044670          206 -----MGNLRGQVLNAEGIANAALYLATDEAS-DVTGLNLVVDGGFS  246 (302)
Q Consensus       206 -----~~~~~~~~~~~~dva~~~~~l~s~~~~-~~~G~~~~~~gG~~  246 (302)
                           .....+..+++-|.|+.+.-++..... ...| ++++--|..
T Consensus       224 d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~-i~Nlgtg~g  269 (343)
T KOG1371|consen  224 DYTTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFG-VYNLGTGKG  269 (343)
T ss_pred             cccccCCCeeecceeeEehHHHHHHHhhccccchhee-eEeecCCCC
Confidence                 001225677888999999888764433 2223 666655554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.67  E-value=2e-15  Score=123.98  Aligned_cols=173  Identities=18%  Similarity=0.169  Sum_probs=126.5

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      |+|+||||.+|+.++++|+++|++|+++.|++++.+.     ..+++++.+|+.|++++.+++.       +.|++|+++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~~   68 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDLFDPDSVKAALK-------GADAVIHAA   68 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCTTCHHHHHHHHT-------TSSEEEECC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----ccccccceeeehhhhhhhhhhh-------hcchhhhhh
Confidence            7999999999999999999999999999999987766     4789999999999999888877       799999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC---------ChhHHHHHH
Q 044670           86 GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG---------SPAYTVSKY  156 (302)
Q Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~---------~~~Y~~sK~  156 (302)
                      |....           +            ...++.+++.+.+.+..++|++||.......+.         ...|...|.
T Consensus        69 ~~~~~-----------~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   69 GPPPK-----------D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             HSTTT-----------H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhcc-----------c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            84321           1            223334444444466789999998876654333         135777776


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..+.+.    +   ..+++.+.++|++++++..........       . ......+++.+|+|.+++.++.
T Consensus       126 ~~e~~~----~---~~~~~~~ivrp~~~~~~~~~~~~~~~~-------~-~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  126 EAEEAL----R---ESGLNWTIVRPGWIYGNPSRSYRLIKE-------G-GPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHH----H---HSTSEEEEEEESEEEBTTSSSEEEESS-------T-STTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHH----H---hcCCCEEEEECcEeEeCCCcceeEEec-------c-CCCCcCcCCHHHHHHHHHHHhC
Confidence            665444    2   248999999999999886432111000       0 1111347899999999998763

...

>PLN02778 3,5-epimerase/4-reductase

Probab=99.66  E-value=1.9e-14  Score=127.43  Aligned_cols=200  Identities=17%  Similarity=0.110  Sum_probs=127.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .+++|||||+|+||++++++|+++|++|+...                     .|+.+.+.+...++..     ++|+||
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------~~~~~~~~v~~~l~~~-----~~D~Vi   62 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------GRLENRASLEADIDAV-----KPTHVF   62 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------CccCCHHHHHHHHHhc-----CCCEEE
Confidence            46899999999999999999999999987421                     3556666666555532     689999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------------C
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------------A  144 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------------~  144 (302)
                      |+||....   +..+...++..+.+++|+.++.++++++...    +..+++ +||...+.                  +
T Consensus        63 H~Aa~~~~---~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~~v~-~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         63 NAAGVTGR---PNVDWCESHKVETIRANVVGTLTLADVCRER----GLVLTN-YATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             ECCcccCC---CCchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCEEE-EecceEeCCCCCCCcccCCCCCcCCCC
Confidence            99997542   1111223455789999999999999999874    233444 44332110                  0


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc--ccCCCCCCHHHHHHH
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLRGQVLNAEGIANA  222 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~  222 (302)
                      .+..+.|+.||.+.|.+++.++..   .+++     ++.+.++...   ....++........  ...+.+..++|++++
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr-----~~~~~~~~~~---~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~a  203 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYENV---CTLR-----VRMPISSDLS---NPRNFITKITRYEKVVNIPNSMTILDELLPI  203 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhcc---EEee-----ecccCCcccc---cHHHHHHHHHcCCCeeEcCCCCEEHHHHHHH
Confidence            112357999999999999886522   2333     3333332111   11234444443221  111447899999999


Q ss_pred             HHHhccCCCCCccccEEeeCCCcccCCCC
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      ++.++...   .+ ..+++.++..++..+
T Consensus       204 l~~~l~~~---~~-g~yNigs~~~iS~~e  228 (298)
T PLN02778        204 SIEMAKRN---LT-GIYNFTNPGVVSHNE  228 (298)
T ss_pred             HHHHHhCC---CC-CeEEeCCCCcccHHH
Confidence            98887532   23 488887776655444

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.65  E-value=1.5e-14  Score=124.27  Aligned_cols=181  Identities=20%  Similarity=0.197  Sum_probs=135.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      +||||++|-+|.++.+.|. .++.|+.++|.+                  +|++|++.+.+++.+.     ++|+|||+|
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------~Ditd~~~v~~~i~~~-----~PDvVIn~A   58 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE------------------LDITDPDAVLEVIRET-----RPDVVINAA   58 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------ccccChHHHHHHHHhh-----CCCEEEECc
Confidence            9999999999999999999 778999887654                  7999999999999987     899999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhHHHH
Q 044670           86 GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAYTVS  154 (302)
Q Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~~s  154 (302)
                      ++...      +....+.+..+.+|..|+.++.+++...     +.++|++||-..+-+..           +...||.|
T Consensus        59 Ayt~v------D~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~s  127 (281)
T COG1091          59 AYTAV------DKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRS  127 (281)
T ss_pred             ccccc------ccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHH
Confidence            97542      2333456899999999999999999884     46799999876544432           34689999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-----ccCCCCCCHHHHHHHHHHhccC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-----NLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      |.+.|..++...       -+...++..++++......  ...+++.......     -..+...+.+|+|+++..++..
T Consensus       128 Kl~GE~~v~~~~-------~~~~I~Rtswv~g~~g~nF--v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~  198 (281)
T COG1091         128 KLAGEEAVRAAG-------PRHLILRTSWVYGEYGNNF--VKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEK  198 (281)
T ss_pred             HHHHHHHHHHhC-------CCEEEEEeeeeecCCCCCH--HHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhc
Confidence            999988887765       3556778888887754221  1122222211100     0115567899999999998865


Q ss_pred             C
Q 044670          230 E  230 (302)
Q Consensus       230 ~  230 (302)
                      .
T Consensus       199 ~  199 (281)
T COG1091         199 E  199 (281)
T ss_pred             c
Confidence            4

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.64  E-value=3.1e-14  Score=150.18  Aligned_cols=224  Identities=14%  Similarity=0.073  Sum_probs=149.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC----CEEEEEecCccHHHHH---HHHh----------CCCeEEEEecCCCHHHH-
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG----AKVVIADVQDNLGQAL---ACKL----------GEDVCYIHCDVTSEDEI-   64 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~---~~~~----------~~~~~~~~~Dl~~~~~v-   64 (302)
                      .++|+||||||+||.+++++|+++|    ++|+...|+.......   ....          ..++.++.+|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4789999999999999999999987    7899988875543221   1111          13688999999854200 


Q ss_pred             -HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc
Q 044670           65 -TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI  143 (302)
Q Consensus        65 -~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~  143 (302)
                       ...++++.   ..+|++||||+....      ..   .+.....+|+.|+.++++.+..    .+..+++++||.+...
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~------~~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v~~ 1114 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHW------VY---PYSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSALD 1114 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecC------cc---CHHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeeecC
Confidence             11122222   268999999996431      11   2344566899999999998865    2456899999975542


Q ss_pred             C-----------------C-----------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC
Q 044670          144 A-----------------G-----------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN  195 (302)
Q Consensus       144 ~-----------------~-----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~  195 (302)
                      .                 .           .....|+.||.+.|.+++.++.    .|+++++++||.|.++........
T Consensus      1115 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1115 TEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             cccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCCc
Confidence            1                 0           0123599999999999887643    389999999999999865544333


Q ss_pred             HHHHHHHHHhc------ccc--CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          196 PAILEAFLSEM------GNL--RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       196 ~~~~~~~~~~~------~~~--~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ..++.......      +..  ...++++++++++++.++........+.++++.++..
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~ 1249 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPR 1249 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCC
Confidence            44444443221      111  1457889999999998875433222345677766644

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.64  E-value=9.8e-15  Score=128.43  Aligned_cols=177  Identities=18%  Similarity=0.159  Sum_probs=129.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccH---HHHHHHH----------hCCCeEEEEecCCC------HHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNL---GQALACK----------LGEDVCYIHCDVTS------EDE   63 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~---~~~~~~~----------~~~~~~~~~~Dl~~------~~~   63 (302)
                      +++++|||||++|++++.+|+.+- .+|++..|.++.   .+.+.+.          ...+++.+.+|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            579999999999999999999865 599999887662   2222221          24789999999983      344


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc
Q 044670           64 ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI  143 (302)
Q Consensus        64 v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~  143 (302)
                      .+++++       .+|.+||||+....         ...+.++...|+.|+..+++.+.-    .+.+-+.++||++...
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~---------v~pYs~L~~~NVlGT~evlrLa~~----gk~Kp~~yVSsisv~~  140 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH---------VFPYSELRGANVLGTAEVLRLAAT----GKPKPLHYVSSISVGE  140 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc---------cCcHHHhcCcchHhHHHHHHHHhc----CCCceeEEEeeeeecc
Confidence            444444       68999999997542         124678899999999999888876    2334489999887543


Q ss_pred             CCC--------------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHH
Q 044670          144 AGI--------------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL  203 (302)
Q Consensus       144 ~~~--------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  203 (302)
                      ...                    ....|+.||-+.|.+++....+    |+++.+++||+|-++.........+++.+++
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv  216 (382)
T COG3320         141 TEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSRTGALNTRDFLTRLV  216 (382)
T ss_pred             ccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCccCccccchHHHHHH
Confidence            211                    2356999999999998887744    9999999999998876644444445544444


Q ss_pred             H
Q 044670          204 S  204 (302)
Q Consensus       204 ~  204 (302)
                      .
T Consensus       217 ~  217 (382)
T COG3320         217 L  217 (382)
T ss_pred             H
Confidence            3

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.61  E-value=1.3e-14  Score=122.25  Aligned_cols=201  Identities=15%  Similarity=0.104  Sum_probs=144.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++++|+||||.|+||+|++++|..+|+.|++.+.-..........+  ...++.+.-|+..+     ++.       .+|
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------evD   93 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------EVD   93 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------Hhh
Confidence            5789999999999999999999999999999876544333322222  24566666676554     444       579


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---------------  144 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---------------  144 (302)
                      .++|.|+..++   +....   ..-+++.+|++++.+++..+.+-     +.|+++.|++..+..               
T Consensus        94 ~IyhLAapasp---~~y~~---npvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e~ywg~vn  162 (350)
T KOG1429|consen   94 QIYHLAAPASP---PHYKY---NPVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVETYWGNVN  162 (350)
T ss_pred             hhhhhccCCCC---ccccc---CccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCccccccccC
Confidence            99999997764   11111   23578889999999999888874     367888887654321               


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--CCHHHHHHHHHhccc-------cCCCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--INPAILEAFLSEMGN-------LRGQVL  214 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~  214 (302)
                       ....+.|...|...|.++..+.++   .||.|.+.++..+++|...-..  ...-++.+.++..+.       -.+.|.
T Consensus       163 pigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~  239 (350)
T KOG1429|consen  163 PIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQ  239 (350)
T ss_pred             cCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEE
Confidence             124568999999999999998866   7999999999999999764321  122334444433221       114588


Q ss_pred             CHHHHHHHHHHhcc
Q 044670          215 NAEGIANAALYLAT  228 (302)
Q Consensus       215 ~~~dva~~~~~l~s  228 (302)
                      .+.|+.+.++.|+.
T Consensus       240 yvsD~Vegll~Lm~  253 (350)
T KOG1429|consen  240 YVSDLVEGLLRLME  253 (350)
T ss_pred             eHHHHHHHHHHHhc
Confidence            99999999999984

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.59  E-value=1.7e-14  Score=121.60  Aligned_cols=225  Identities=16%  Similarity=0.103  Sum_probs=154.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH-------HHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL-------ACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .+|++||||-||.=|..+++.|+++||.|..+.|+.+.....       ....+.+++++.+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            378999999999999999999999999999998764332211       1111245889999999999999999988   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------  143 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------  143 (302)
                        .+|-+.|.|+      +.....+.+..+.+.+++.+|+++++.++.-.-  ....|+...||+--+.           
T Consensus        78 --~PdEIYNLaA------QS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 --QPDEIYNLAA------QSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             --Cchhheeccc------cccccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccCC
Confidence              8999999998      455667788889999999999999998887754  2245677777654322           


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc---------c--ccCCC
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM---------G--NLRGQ  212 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~---------~--~~~~~  212 (302)
                      |+.++++|+++|.....++..++..|   |+..+.=...+-.+|.-...+..........+-.         .  .-.+.
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResY---gl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESY---GLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhc---CceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccc
Confidence            34478899999999999998888664   4433322223333333333333333222222210         0  01167


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++...|.++++..++..+.    .+.+.+.-|..
T Consensus       225 WG~A~DYVe~mwlmLQq~~----PddyViATg~t  254 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQEE----PDDYVIATGET  254 (345)
T ss_pred             ccchHHHHHHHHHHHccCC----CCceEEecCce
Confidence            8999999999887775432    34444444444

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.58  E-value=8.3e-14  Score=122.67  Aligned_cols=215  Identities=13%  Similarity=0.016  Sum_probs=126.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      ||||||+|+||.++++.|+++|++|++++|+.+.......     ..  ..|+.. ...       .+....+|+|||+|
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~--~~~~~~-~~~-------~~~~~~~D~Vvh~a   65 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-----EG--YKPWAP-LAE-------SEALEGADAVINLA   65 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-----ee--eecccc-cch-------hhhcCCCCEEEECC
Confidence            6899999999999999999999999999998765432110     01  112222 111       22234799999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----------C-CChhHHHH
Q 044670           86 GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----------I-GSPAYTVS  154 (302)
Q Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------~-~~~~Y~~s  154 (302)
                      +....    ......+..+..+++|+.++.++++++...-.  ....++++||...+...          + +...|+..
T Consensus        66 ~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~  139 (292)
T TIGR01777        66 GEPIA----DKRWTEERKQEIRDSRIDTTRALVEAIAAAEQ--KPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAEL  139 (292)
T ss_pred             CCCcc----cccCCHHHHHHHHhcccHHHHHHHHHHHhcCC--CceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHH
Confidence            95321    12234456677889999999998888876311  11234444443222110          0 11123333


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH---h-c--cccCCCCCCHHHHHHHHHHhcc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS---E-M--GNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---~-~--~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      +...+...+.    +...++++++++|+.+++|....   ...+...+..   . .  ......+++++|+++++..++.
T Consensus       140 ~~~~e~~~~~----~~~~~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~  212 (292)
T TIGR01777       140 CRDWEEAAQA----AEDLGTRVVLLRTGIVLGPKGGA---LAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALE  212 (292)
T ss_pred             HHHHHHHhhh----chhcCCceEEEeeeeEECCCcch---hHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhc
Confidence            4333333332    23357999999999999985311   1121111110   0 0  0111468999999999999986


Q ss_pred             CCCCCccccEEeeCCCcccCCCC
Q 044670          229 DEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      .+..   +.++++.++..++..+
T Consensus       213 ~~~~---~g~~~~~~~~~~s~~d  232 (292)
T TIGR01777       213 NASI---SGPVNATAPEPVRNKE  232 (292)
T ss_pred             Cccc---CCceEecCCCccCHHH
Confidence            4322   3467777666544433

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN00016 RNA-binding protein; Provisional

Probab=99.58  E-value=8.5e-14  Score=127.46  Aligned_cols=200  Identities=16%  Similarity=0.142  Sum_probs=129.2

Q ss_pred             CCEEEEe----CCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH-------HHh-CCCeEEEEecCCCHHHHHHHHHH
Q 044670            3 GKVAIIT----GGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA-------CKL-GEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         3 gk~vlVT----Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~-~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      .++||||    ||||+||.+++++|+++|++|++++|+........       ..+ ...++++.+|+.|   +.+++. 
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~-  127 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVA-  127 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhc-
Confidence            4789999    99999999999999999999999999875432211       111 1347888899876   333332 


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC---
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG---  147 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~---  147 (302)
                          ...+|+|||+++.      .                ..++..+++++.    +.+..++|++||...+.....   
T Consensus       128 ----~~~~d~Vi~~~~~------~----------------~~~~~~ll~aa~----~~gvkr~V~~SS~~vyg~~~~~p~  177 (378)
T PLN00016        128 ----GAGFDVVYDNNGK------D----------------LDEVEPVADWAK----SPGLKQFLFCSSAGVYKKSDEPPH  177 (378)
T ss_pred             ----cCCccEEEeCCCC------C----------------HHHHHHHHHHHH----HcCCCEEEEEccHhhcCCCCCCCC
Confidence                1268999998762      1                112333444443    345679999999765432111   


Q ss_pred             -----ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--c-----CCCCCC
Q 044670          148 -----SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--L-----RGQVLN  215 (302)
Q Consensus       148 -----~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~  215 (302)
                           ...+. +|...|.+.+       ..+++++.++|+++++|..... ....++.......+.  +     ...+++
T Consensus       178 ~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~g~g~~~~~~i~  248 (378)
T PLN00016        178 VEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIPGSGIQLTQLGH  248 (378)
T ss_pred             CCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeecCCCCeeeceec
Confidence                 11122 7888876653       2479999999999999865421 112233333222111  1     124778


Q ss_pred             HHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++|+|+++..++..+.  ..|+++++.++..+
T Consensus       249 v~Dva~ai~~~l~~~~--~~~~~yni~~~~~~  278 (378)
T PLN00016        249 VKDLASMFALVVGNPK--AAGQIFNIVSDRAV  278 (378)
T ss_pred             HHHHHHHHHHHhcCcc--ccCCEEEecCCCcc
Confidence            9999999998886432  35789999888654

>PRK12320 hypothetical protein; Provisional

Probab=99.56  E-value=5.1e-13  Score=128.82  Aligned_cols=188  Identities=15%  Similarity=0.095  Sum_probs=127.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +||||||+|+||++++++|+++|++|++++|.....      ....++++.+|++++. +.+++.       ++|++||+
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~VIHL   67 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA------LDPRVDYVCASLRNPV-LQELAG-------EADAVIHL   67 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc------ccCCceEEEccCCCHH-HHHHhc-------CCCEEEEc
Confidence            699999999999999999999999999999865421      1246788999999984 444433       68999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI  164 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (302)
                      |+....        .      ...+|+.++.++++++..    .+ .++|++||..+.   +  ..|.    ..|.+.  
T Consensus        68 Aa~~~~--------~------~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~~G~---~--~~~~----~aE~ll--  117 (699)
T PRK12320         68 APVDTS--------A------PGGVGITGLAHVANAAAR----AG-ARLLFVSQAAGR---P--ELYR----QAETLV--  117 (699)
T ss_pred             CccCcc--------c------hhhHHHHHHHHHHHHHHH----cC-CeEEEEECCCCC---C--cccc----HHHHHH--
Confidence            985321        0      124799999999988866    33 379999986421   1  1232    123322  


Q ss_pred             HHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeC
Q 044670          165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIANAALYLATDEASDVTGLNLVVD  242 (302)
Q Consensus       165 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~  242 (302)
                        ..   .++++..++|+++++|.....  ....+..+......  + -.+++++|++++++.+++...   +| ++++.
T Consensus       118 --~~---~~~p~~ILR~~nVYGp~~~~~--~~r~I~~~l~~~~~~~p-I~vIyVdDvv~alv~al~~~~---~G-iyNIG  185 (699)
T PRK12320        118 --ST---GWAPSLVIRIAPPVGRQLDWM--VCRTVATLLRSKVSARP-IRVLHLDDLVRFLVLALNTDR---NG-VVDLA  185 (699)
T ss_pred             --Hh---cCCCEEEEeCceecCCCCccc--HhHHHHHHHHHHHcCCc-eEEEEHHHHHHHHHHHHhCCC---CC-EEEEe
Confidence              12   358899999999999854321  12333333332111  1 114599999999988885422   35 89998


Q ss_pred             CCcccC
Q 044670          243 GGFSVA  248 (302)
Q Consensus       243 gG~~~~  248 (302)
                      +|..++
T Consensus       186 ~~~~~S  191 (699)
T PRK12320        186 TPDTTN  191 (699)
T ss_pred             CCCeeE
Confidence            887743

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.53  E-value=6.9e-13  Score=126.44  Aligned_cols=220  Identities=15%  Similarity=0.094  Sum_probs=141.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccHH---HHHHHHh---------------------CCCeEE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNLG---QALACKL---------------------GEDVCY   53 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~---~~~~~~~---------------------~~~~~~   53 (302)
                      ++||+|+||||||+||.+++++|++.+.   +|++..|..+..   +.+..++                     ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            3799999999999999999999998764   578888854321   1111110                     136888


Q ss_pred             EEecCCCH------HHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc
Q 044670           54 IHCDVTSE------DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP  127 (302)
Q Consensus        54 ~~~Dl~~~------~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  127 (302)
                      +.+|++++      +..+.+.+       .+|+|||+|+....         .+.++..+++|+.|+.++++.+...   
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f---------~~~~~~a~~vNV~GT~nLLelA~~~---  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF---------DERYDVAIDINTRGPCHLMSFAKKC---  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc---------ccCHHHHHHHHHHHHHHHHHHHHHc---
Confidence            99999987      33333332       68999999996431         1346788999999999999988764   


Q ss_pred             CCCCEEEEEcCcccccCC---------C----------------------------------------------------
Q 044670          128 QHKGCILFTASACTEIAG---------I----------------------------------------------------  146 (302)
Q Consensus       128 ~~~~~iv~~sS~~~~~~~---------~----------------------------------------------------  146 (302)
                      ....++|++||.......         +                                                    
T Consensus       258 ~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g  337 (605)
T PLN02503        258 KKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLG  337 (605)
T ss_pred             CCCCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcc
Confidence            123578999886532211         0                                                    


Q ss_pred             --------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-------CHHHHHHHHHhc-c---
Q 044670          147 --------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-------NPAILEAFLSEM-G---  207 (302)
Q Consensus       147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~-~---  207 (302)
                              ....|..+|+..|.+++...     .++++.+++|+.|.+....+...       ............ .   
T Consensus       338 ~~~~~~~~~pNtYt~TK~lAE~lV~~~~-----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~  412 (605)
T PLN02503        338 LERAKLYGWQDTYVFTKAMGEMVINSMR-----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFL  412 (605)
T ss_pred             cchhhhCCCCChHHHHHHHHHHHHHHhc-----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEE
Confidence                    01358889988888877433     37999999999995532222110       001111111110 0   


Q ss_pred             ---ccCCCCCCHHHHHHHHHHhccC-C-CCCccccEEeeCCC
Q 044670          208 ---NLRGQVLNAEGIANAALYLATD-E-ASDVTGLNLVVDGG  244 (302)
Q Consensus       208 ---~~~~~~~~~~dva~~~~~l~s~-~-~~~~~G~~~~~~gG  244 (302)
                         ...-.++.++-|+++++.++.. . ....+++++++..+
T Consensus       413 ~~~~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        413 ADPNGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             eCCCeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence               0012367899999998877321 1 11235889999877

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.52  E-value=3.6e-13  Score=118.54  Aligned_cols=198  Identities=16%  Similarity=0.148  Sum_probs=122.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC-ccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK-LDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-id~lv~   83 (302)
                      +++||||||+||++++++|+++|++|++..|+.++...      ..++.+.+|+.|++++..+++.. +.... +|.+++
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~   73 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYL   73 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC------CCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEE
Confidence            48999999999999999999999999999998775421      24566788999999998887542 22235 899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      +++...           +..+        ...+++.    .+++.+.++||++||.....+.       .++...+.+.+
T Consensus        74 ~~~~~~-----------~~~~--------~~~~~i~----aa~~~gv~~~V~~Ss~~~~~~~-------~~~~~~~~~l~  123 (285)
T TIGR03649        74 VAPPIP-----------DLAP--------PMIKFID----FARSKGVRRFVLLSASIIEKGG-------PAMGQVHAHLD  123 (285)
T ss_pred             eCCCCC-----------ChhH--------HHHHHHH----HHHHcCCCEEEEeeccccCCCC-------chHHHHHHHHH
Confidence            876321           0111        1122333    3334567899999986543321       12322222222


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH--HHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEee
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA--FLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~  241 (302)
                      .      ..|+..++++|++++.+....... ......  +..........+++++|+|+++..++..+..  .|+.+++
T Consensus       124 ~------~~gi~~tilRp~~f~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~--~~~~~~l  194 (285)
T TIGR03649       124 S------LGGVEYTVLRPTWFMENFSEEFHV-EAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVA--PNTDYVV  194 (285)
T ss_pred             h------ccCCCEEEEeccHHhhhhcccccc-cccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCc--CCCeEEe
Confidence            1      138999999999887654221100 000000  0000011113488999999999988865432  3666777


Q ss_pred             CCCcccC
Q 044670          242 DGGFSVA  248 (302)
Q Consensus       242 ~gG~~~~  248 (302)
                      .|+..++
T Consensus       195 ~g~~~~s  201 (285)
T TIGR03649       195 LGPELLT  201 (285)
T ss_pred             eCCccCC
Confidence            7765544

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.49  E-value=1.6e-12  Score=127.47  Aligned_cols=200  Identities=14%  Similarity=0.105  Sum_probs=126.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .+++|||||+|+||++++++|.++|++|...                     ..|++|.+.+.++++..     ++|+||
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------~~~l~d~~~v~~~i~~~-----~pd~Vi  433 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------KGRLEDRSSLLADIRNV-----KPTHVF  433 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------ccccccHHHHHHHHHhh-----CCCEEE
Confidence            4679999999999999999999999987321                     24688888887777654     789999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------C-------
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------A-------  144 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------~-------  144 (302)
                      |+|+....   +..+...++.++.+++|+.++.++++++...    +. +++++||...+.           +       
T Consensus       434 h~Aa~~~~---~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        434 NAAGVTGR---PNVDWCESHKVETIRANVVGTLTLADVCREN----GL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             ECCcccCC---CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----CC-eEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            99997542   1122334456789999999999999999874    23 455565533211           1       


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--cCCCCCCHHHHHHH
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIANA  222 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~  222 (302)
                      .+....|+.||.+.|.+++.+..   -..+++..+..+...+        ...++....+....  ......+.+++..+
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~~~~~~~--------~~nfv~~~~~~~~~~~vp~~~~~~~~~~~~  574 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPISSDLSN--------PRNFITKISRYNKVVNIPNSMTVLDELLPI  574 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhh---heEEEEEEecccCCCC--------ccHHHHHHhccceeeccCCCceehhhHHHH
Confidence            11236799999999999987642   1344554443221111        11233333322111  11234556666666


Q ss_pred             HHHhccCCCCCccccEEeeCCCcccCCCC
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      ++.++...    .|.++++.++..++..+
T Consensus       575 ~~~l~~~~----~~giyni~~~~~~s~~e  599 (668)
T PLN02260        575 SIEMAKRN----LRGIWNFTNPGVVSHNE  599 (668)
T ss_pred             HHHHHHhC----CCceEEecCCCcCcHHH
Confidence            66666421    24688887776655444

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.47  E-value=5.7e-12  Score=109.38  Aligned_cols=184  Identities=14%  Similarity=0.100  Sum_probs=151.2

Q ss_pred             CCEEEEeCC-CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-----
Q 044670            3 GKVAIITGG-ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-----   76 (302)
Q Consensus         3 gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-----   76 (302)
                      ..+|+|.|. +.-|++.+|..|-++|+-|+++..+.+..+.+..+....+.....|..++.++...+.+......     
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p   82 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESEDRPDIRPLWLDDSDPSSIHASLSRFASLLSRPHVP   82 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhccCCCCCCcccCCCCCcchHHHHHHHHHHhcCCCCC
Confidence            457889885 79999999999999999999999988877777666566688888898888888777777766543     


Q ss_pred             ---------CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc---CCCCEEEEEcCcccccC
Q 044670           77 ---------KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP---QHKGCILFTASACTEIA  144 (302)
Q Consensus        77 ---------~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~---~~~~~iv~~sS~~~~~~  144 (302)
                               .+..||..-.... ...|++.++.+.|.+.++.|+..++.+++.++|+++.   ++..-|++.-|+.+...
T Consensus        83 ~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~  161 (299)
T PF08643_consen   83 FPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN  161 (299)
T ss_pred             CCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence                     2344554444333 3478899999999999999999999999999999987   33344455558878888


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCC
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG  187 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  187 (302)
                      .|..+.-.....++..|+..|++|+.+++|+|..++.|.++-.
T Consensus       162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            8889999999999999999999999999999999999988765

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.42  E-value=1.5e-12  Score=109.85  Aligned_cols=215  Identities=18%  Similarity=0.156  Sum_probs=126.8

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      |+||||||.||++++.+|.+.|++|+++.|+..+.+....   ..+.       ..+.+....+    .  ++|+|||.|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~---~~v~-------~~~~~~~~~~----~--~~DavINLA   64 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH---PNVT-------LWEGLADALT----L--GIDAVINLA   64 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC---cccc-------ccchhhhccc----C--CCCEEEECC
Confidence            5899999999999999999999999999999887654321   1111       1111111111    1  699999999


Q ss_pred             cCCCCCCCCCCC--CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           86 GIVDRGFASVLD--TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        86 g~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |.      ++.+  .+.+.=+..++.-+..+-.+...+...   ...+++..-+|..++++......|.-....-+.|..
T Consensus        65 G~------~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla  135 (297)
T COG1090          65 GE------PIAERRWTEKQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLA  135 (297)
T ss_pred             CC------ccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCCCceeeecCCCCCCChHH
Confidence            95      3322  566655666666666666555555542   234566666677777776554444433333333333


Q ss_pred             HHHHHH-------CCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH-hcccc--CCCCCCHHHHHHHHHHhccCCCCC
Q 044670          164 ILAAEL-------RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS-EMGNL--RGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       164 ~la~e~-------~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      .+.++|       ...|+||+.++-|.|.++........-..++.... +...-  .-.+++.+|..+++.|++..+.  
T Consensus       136 ~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~--  213 (297)
T COG1090         136 QLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ--  213 (297)
T ss_pred             HHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC--
Confidence            333333       23489999999999987543221111111111110 00000  0127899999999999996533  


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      +.| .+++..-.++.
T Consensus       214 lsG-p~N~taP~PV~  227 (297)
T COG1090         214 LSG-PFNLTAPNPVR  227 (297)
T ss_pred             CCC-cccccCCCcCc
Confidence            345 34444444433

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.36  E-value=5.5e-10  Score=86.91  Aligned_cols=219  Identities=18%  Similarity=0.201  Sum_probs=150.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      |+-.+|+|-||-|.+|+++++.|.+++|-|.-++..++...       +.-..+..|-+=.|+-+.+.+++-+..  .++
T Consensus         1 msagrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    1 MSAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CCCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            45567999999999999999999999999988776544211       111234444444455555666665544  379


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |.+++.||.+..+...-.++ ....+-|+.-.+.....-.+.+..++++  +|-+-..+.-++..+.|++..|+.+|+|+
T Consensus        74 Dav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAV  150 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAV  150 (236)
T ss_pred             ceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHH
Confidence            99999999876432221111 2234456666666666666666677743  46666677778888999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      .+++++|+.+-.  +.|--+.+|.|=..+|||.+..-...++            ..+...+.+++..+....+.+.--+|
T Consensus       151 HqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~ADf------------ssWTPL~fi~e~flkWtt~~~RPssG  218 (236)
T KOG4022|consen  151 HQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNADF------------SSWTPLSFISEHFLKWTTETSRPSSG  218 (236)
T ss_pred             HHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCcc------------cCcccHHHHHHHHHHHhccCCCCCCC
Confidence            999999997642  4577889999999999998765322211            33556778888877776655555567


Q ss_pred             cEEee
Q 044670          237 LNLVV  241 (302)
Q Consensus       237 ~~~~~  241 (302)
                      ..+-+
T Consensus       219 sLlqi  223 (236)
T KOG4022|consen  219 SLLQI  223 (236)
T ss_pred             ceEEE
Confidence            65543

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.31  E-value=7e-11  Score=99.92  Aligned_cols=208  Identities=17%  Similarity=0.135  Sum_probs=145.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++|-++-|.||||++|+.++.+|++.|-+|++-.|-.+-.-.-.+-.+  +++-++..|+.|+++++++++       .-
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk-------~s  131 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK-------HS  131 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH-------hC
Confidence            367788899999999999999999999999999886553222112122  578899999999999999998       67


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ++|||..|.-.+    ....      ...++|+.++-.+.+.+.+    .+.-++|.+|+..+.  ....+-|--||++.
T Consensus       132 NVVINLIGrd~e----Tknf------~f~Dvn~~~aerlAricke----~GVerfIhvS~Lgan--v~s~Sr~LrsK~~g  195 (391)
T KOG2865|consen  132 NVVINLIGRDYE----TKNF------SFEDVNVHIAERLARICKE----AGVERFIHVSCLGAN--VKSPSRMLRSKAAG  195 (391)
T ss_pred             cEEEEeeccccc----cCCc------ccccccchHHHHHHHHHHh----hChhheeehhhcccc--ccChHHHHHhhhhh
Confidence            999999995332    1112      2345788888888888877    456789999998754  34456788899888


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc--ccC-------CCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLR-------GQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~dva~~~~~l~s~  229 (302)
                      |..++..-       -..++|.|.-+++.-.+-.    ..+..+.++..  ++.       +..+.+-|||.+++-++-+
T Consensus       196 E~aVrdaf-------PeAtIirPa~iyG~eDrfl----n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkD  264 (391)
T KOG2865|consen  196 EEAVRDAF-------PEATIIRPADIYGTEDRFL----NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKD  264 (391)
T ss_pred             HHHHHhhC-------CcceeechhhhcccchhHH----HHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccC
Confidence            77665432       2457899988887533211    11111222111  111       4467889999999999876


Q ss_pred             CCCCccccEEeeCCC
Q 044670          230 EASDVTGLNLVVDGG  244 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG  244 (302)
                      +.+  .|.++..-|-
T Consensus       265 p~s--~Gktye~vGP  277 (391)
T KOG2865|consen  265 PDS--MGKTYEFVGP  277 (391)
T ss_pred             ccc--cCceeeecCC
Confidence            644  6877766553

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.31  E-value=4.7e-10  Score=91.45  Aligned_cols=162  Identities=11%  Similarity=0.083  Sum_probs=110.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++||||| |+|.++++.|+++|++|++++|+.+..+.+...+  ..++.++.+|++|++++.++++.+.+.++++|.+
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            379999999 5666799999999999999999887766655433  2467888999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |+.+-..                        ++-++..++.+.-.+.+.-+++.+-.+.+..+                 
T Consensus        80 v~~vh~~------------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~-----------------  118 (177)
T PRK08309         80 VAWIHSS------------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP-----------------  118 (177)
T ss_pred             EEecccc------------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------------
Confidence            9866421                        23444455555433333336766554333111                 


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                       +..+.........-.-|..|++...-.                     .|+.+=+|+++.++..+..
T Consensus       119 -~~~~~~~~~~~~~~~~i~lgf~~~~~~---------------------~rwlt~~ei~~gv~~~~~~  164 (177)
T PRK08309        119 -RIPSEKIGPARCSYRRVILGFVLEDTY---------------------SRWLTHEEISDGVIKAIES  164 (177)
T ss_pred             -hhhhhhhhhcCCceEEEEEeEEEeCCc---------------------cccCchHHHHHHHHHHHhc
Confidence             111112222345666777788875533                     4467788888888877753

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.29  E-value=1.7e-10  Score=94.53  Aligned_cols=204  Identities=17%  Similarity=0.156  Sum_probs=136.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++++|||++|-+|++|.+.+.++|.   +.++.+                  .-.+||++.++++++++..     ++.+
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~------------------skd~DLt~~a~t~~lF~~e-----kPth   58 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG------------------SKDADLTNLADTRALFESE-----KPTH   58 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec------------------cccccccchHHHHHHHhcc-----CCce
Confidence            6899999999999999999999885   222221                  1247999999999999876     7899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc----------------C
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI----------------A  144 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~----------------~  144 (302)
                      |||.|+....   -+...+.  -.+.+..|+.-.-++++.+.++    +..++|+..|..-+.                +
T Consensus        59 VIhlAAmVGG---lf~N~~y--nldF~r~Nl~indNVlhsa~e~----gv~K~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   59 VIHLAAMVGG---LFHNNTY--NLDFIRKNLQINDNVLHSAHEH----GVKKVVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             eeehHhhhcc---hhhcCCC--chHHHhhcceechhHHHHHHHh----chhhhhhhcceeecCCCCCCCCCHHHhccCCC
Confidence            9999976542   2222221  1244555555556677777774    344466655544321                1


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCHHHHHHHHHh------------ccc
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLSE------------MGN  208 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~------------~~~  208 (302)
                      .+.+..|+.+|..+.-..+.++.+   +|-..+++.|-.+++|-..-.    ...+.++.++...            -..
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~q---hg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~  206 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQ---HGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGS  206 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHH---hCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCC
Confidence            234567999998887777888877   566888999999998854322    2245666555331            123


Q ss_pred             cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      |+++|+...|.|++.+|++.+=+   .=+-+++.-|.
T Consensus       207 PlRqFiys~DLA~l~i~vlr~Y~---~vEpiils~ge  240 (315)
T KOG1431|consen  207 PLRQFIYSDDLADLFIWVLREYE---GVEPIILSVGE  240 (315)
T ss_pred             hHHHHhhHhHHHHHHHHHHHhhc---CccceEeccCc
Confidence            44889999999999999995422   22445555554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.24  E-value=2e-10  Score=107.64  Aligned_cols=156  Identities=17%  Similarity=0.159  Sum_probs=114.1

Q ss_pred             EeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcccC
Q 044670            8 ITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus         8 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag~   87 (302)
                      |+||++|+|.++++.|...|+.|+.+.+...+..                ...              ..+++.+++-+..
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~----------------~~~--------------~~~~~~~~~d~~~   92 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWA----------------AGW--------------GDRFGALVFDATG   92 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccccccc----------------cCc--------------CCcccEEEEECCC
Confidence            8888999999999999999999998765443110                000              0145555543321


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHH
Q 044670           88 VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA  167 (302)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~  167 (302)
                      .         .+.+++        .+.+.+++..++.|.  ..++||+++|.....   ....|+.+|+++..++|.+++
T Consensus        93 ~---------~~~~~l--------~~~~~~~~~~l~~l~--~~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~  150 (450)
T PRK08261         93 I---------TDPADL--------KALYEFFHPVLRSLA--PCGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGK  150 (450)
T ss_pred             C---------CCHHHH--------HHHHHHHHHHHHhcc--CCCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHH
Confidence            1         112222        233456777788774  357999999976643   345799999999999999999


Q ss_pred             HHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       168 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      |+ +++++++.|.|+.                              ..+++++.++.|++++...+++|+.+.++++..
T Consensus       151 E~-~~gi~v~~i~~~~------------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~~~~~~  198 (450)
T PRK08261        151 EL-RRGATAQLVYVAP------------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRVGAADA  198 (450)
T ss_pred             Hh-hcCCEEEEEecCC------------------------------CCHHHHHHHHHHhcCCccCCccCcEEEecCCcc
Confidence            99 6799999998853                              257788888889999888899999999988764

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.23  E-value=3.8e-11  Score=101.83  Aligned_cols=99  Identities=16%  Similarity=0.182  Sum_probs=76.0

Q ss_pred             EEeCC-CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            7 IITGG-ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         7 lVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      .||.. |||||+++|++|+++|++|+++++...    . .   . .....+|+++.++++++++++.+.++++|++||||
T Consensus        18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~----l-~---~-~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnA   88 (227)
T TIGR02114        18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA----L-K---P-EPHPNLSIREIETTKDLLITLKELVQEHDILIHSM   88 (227)
T ss_pred             eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh----c-c---c-ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            45533 789999999999999999999876321    1 0   0 01245899999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHH
Q 044670           86 GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK  119 (302)
Q Consensus        86 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  119 (302)
                      |+...  .++.+.+.++|++++..   +.|.+.+
T Consensus        89 gv~d~--~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        89 AVSDY--TPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             Eeccc--cchhhCCHHHHhhhcch---hhhhccc
Confidence            97643  57888888999877554   4455544

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.14  E-value=1.3e-10  Score=99.32  Aligned_cols=199  Identities=10%  Similarity=0.061  Sum_probs=121.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH-HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      |+||||||.+|++++++|++.|++|.+..|+.+.... ..+..  .++++.+|+.|++++.++++       .+|.++++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~--g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL--GAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT--TTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc--cceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            6899999999999999999999999999998754221 22222  45778999999999988888       89999998


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----CChhHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIA  160 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~a~~~  160 (302)
                      .+....        .  .        .....++++++.+    .+..++|+ ||........    +...+-..|..++.
T Consensus        72 ~~~~~~--------~--~--------~~~~~~li~Aa~~----agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~  128 (233)
T PF05368_consen   72 TPPSHP--------S--E--------LEQQKNLIDAAKA----AGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEE  128 (233)
T ss_dssp             SSCSCC--------C--H--------HHHHHHHHHHHHH----HT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHH
T ss_pred             cCcchh--------h--h--------hhhhhhHHHhhhc----cccceEEE-EEecccccccccccccchhhhhhhhhhh
Confidence            874321        1  1        1123445566666    34677875 4443333211    12334457766665


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH-HHhccccC---CCC-CCHHHHHHHHHHhccCCCCCcc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF-LSEMGNLR---GQV-LNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~---~~~-~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +.+..       +++.+.|+||+.+................. .-......   ..+ .+.+|+|+++..++.++..+-.
T Consensus       129 ~l~~~-------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~  201 (233)
T PF05368_consen  129 YLRES-------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNN  201 (233)
T ss_dssp             HHHHC-------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTE
T ss_pred             hhhhc-------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcC
Confidence            55433       799999999987654332110000000000 00000000   124 3889999999999987655446


Q ss_pred             ccEEeeCC
Q 044670          236 GLNLVVDG  243 (302)
Q Consensus       236 G~~~~~~g  243 (302)
                      |..+.+.|
T Consensus       202 ~~~~~~~~  209 (233)
T PF05368_consen  202 GKTIFLAG  209 (233)
T ss_dssp             EEEEEEGG
T ss_pred             CEEEEeCC
Confidence            78877755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.07  E-value=1.1e-08  Score=89.06  Aligned_cols=195  Identities=16%  Similarity=0.120  Sum_probs=126.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +.+|||||||++|.+++++|.++|++|++..|+.+......    ..+.+...|+.++.++...++       ..|.+++
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~   69 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----GGVEVVLGDLRDPKSLVAGAK-------GVDGVLL   69 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc----CCcEEEEeccCCHhHHHHHhc-------cccEEEE
Confidence            36899999999999999999999999999999998887765    578899999999999888887       7898888


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      ..+... + ..          ........+.....+.+.     .+...++.+|+.....  .....|..+|...+...+
T Consensus        70 i~~~~~-~-~~----------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~  130 (275)
T COG0702          70 ISGLLD-G-SD----------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALR  130 (275)
T ss_pred             Eecccc-c-cc----------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHH
Confidence            777532 1 00          111112222233222222     1245677777765543  244689999977776655


Q ss_pred             HHHHHHCCCCcEEEEEeC-CcccCCcccCCCCCHHHHHHHHHhc----cccC--CCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          164 ILAAELRQYGLRVNCVSP-YGLVSGISSRNSINPAILEAFLSEM----GNLR--GQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +       .|+.-..+.| +++.+....       .........    ..+.  -..+..+|++.++...+..+.  ..|
T Consensus       131 ~-------sg~~~t~lr~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~  194 (275)
T COG0702         131 S-------SGIPYTTLRRAAFYLGAGAA-------FIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAG  194 (275)
T ss_pred             h-------cCCCeEEEecCeeeeccchh-------HHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccC
Confidence            4       3577666664 444332211       011111111    1111  236789999999888876544  357


Q ss_pred             cEEeeCCC
Q 044670          237 LNLVVDGG  244 (302)
Q Consensus       237 ~~~~~~gG  244 (302)
                      +++.+.|-
T Consensus       195 ~~~~l~g~  202 (275)
T COG0702         195 RTYELAGP  202 (275)
T ss_pred             cEEEccCC
Confidence            77777775

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.94  E-value=3e-08  Score=90.98  Aligned_cols=168  Identities=18%  Similarity=0.179  Sum_probs=115.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEecCccHH---HHHH--------HHh-------CCCeEEEEecCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG---AKVVIADVQDNLG---QALA--------CKL-------GEDVCYIHCDVT   59 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~---~~~~--------~~~-------~~~~~~~~~Dl~   59 (302)
                      ++||+++||||||++|.-+++.|++.-   -++.+.-|..+..   +.+.        +.+       -.++..+.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            379999999999999999999999853   2566666643211   1111        111       156777888988


Q ss_pred             CHH------HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEE
Q 044670           60 SED------EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCI  133 (302)
Q Consensus        60 ~~~------~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~i  133 (302)
                      +++      +.+...+       .+|++||.|+....         .|..+..+.+|..|+.++++.+.....   -...
T Consensus        90 ~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~  150 (467)
T KOG1221|consen   90 EPDLGISESDLRTLAD-------EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEMVK---LKAL  150 (467)
T ss_pred             CcccCCChHHHHHHHh-------cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheE
Confidence            654      3332222       79999999996431         245677899999999999999988653   3468


Q ss_pred             EEEcCcccccC--------CC--------------------------------CChhHHHHHHHHHHHHHHHHHHHCCCC
Q 044670          134 LFTASACTEIA--------GI--------------------------------GSPAYTVSKYGIIALVKILAAELRQYG  173 (302)
Q Consensus       134 v~~sS~~~~~~--------~~--------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~g  173 (302)
                      |.+|+..+.-.        .+                                ....|.-+|+..|++...-+     .+
T Consensus       151 vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----~~  225 (467)
T KOG1221|consen  151 VHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----EN  225 (467)
T ss_pred             EEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----cC
Confidence            88887654411        00                                12358888887777766555     57


Q ss_pred             cEEEEEeCCcccCCcccCC
Q 044670          174 LRVNCVSPYGLVSGISSRN  192 (302)
Q Consensus       174 i~v~~v~PG~v~t~~~~~~  192 (302)
                      +.+..++|..|......+.
T Consensus       226 lPivIiRPsiI~st~~EP~  244 (467)
T KOG1221|consen  226 LPLVIIRPSIITSTYKEPF  244 (467)
T ss_pred             CCeEEEcCCceeccccCCC
Confidence            9999999988876655443

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.91  E-value=1.3e-07  Score=87.87  Aligned_cols=234  Identities=16%  Similarity=0.139  Sum_probs=145.6

Q ss_pred             CCCEEEEeCCCC-hHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGAS-GIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      .++++|||||+. .||.+++.+|++.|++|+++..+ .+...+..+.+       +..+-+++.++++..+|+++++.+-
T Consensus       395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg  474 (866)
T COG4982         395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG  474 (866)
T ss_pred             ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence            578999999985 59999999999999999998543 33333333332       4567888999999999999999985


Q ss_pred             HHcC--------------CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEE
Q 044670           73 AKYG--------------KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILF  135 (302)
Q Consensus        73 ~~~~--------------~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~  135 (302)
                      .+..              .+|.+|--|+....+  .+.+.... -+..+++-+.....++-.+.+.-..++   +-.||.
T Consensus       475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G--~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVL  551 (866)
T COG4982         475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG--ELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVL  551 (866)
T ss_pred             cccccccCCcceecccccCcceeeecccCCccC--ccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEe
Confidence            4321              367888877765442  34443322 133344444444444444444332222   223454


Q ss_pred             EcCc-ccccCCCCChhHHHHHHHHHHHHHHHHHH--HCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCC
Q 044670          136 TASA-CTEIAGIGSPAYTVSKYGIIALVKILAAE--LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQ  212 (302)
Q Consensus       136 ~sS~-~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (302)
                      -.|- -+.  +.+-.+|+-||++++.+...+..|  |+. .+.+.--.-||+.+..+...  + ..+.....++.   -+
T Consensus       552 PgSPNrG~--FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~--N-diiv~aiEk~G---V~  622 (866)
T COG4982         552 PGSPNRGM--FGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGH--N-DIIVAAIEKAG---VR  622 (866)
T ss_pred             cCCCCCCc--cCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCC--c-chhHHHHHHhC---ce
Confidence            4442 222  234468999999999988777765  333 36666666799988776543  2 22333333332   23


Q ss_pred             CCCHHHHHHHHHHhccCCCCC---ccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASD---VTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~---~~G~~~~~~gG~~~  247 (302)
                      ..+.+|+|.-++-|++.+...   -+--...++||...
T Consensus       623 tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~  660 (866)
T COG4982         623 TYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE  660 (866)
T ss_pred             ecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence            668899999988888753211   12234567788663

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.82  E-value=1.9e-08  Score=91.97  Aligned_cols=78  Identities=31%  Similarity=0.352  Sum_probs=61.4

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||++|||||                ||++|+++|++|+++|++|++++++.+. .     ...  .+..+|+++.+++
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-----~~~--~~~~~dv~~~~~~  257 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-----TPA--GVKRIDVESAQEM  257 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-----CCC--CcEEEccCCHHHH
Confidence            57999999999                5669999999999999999999886531 1     111  2346799998887


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      .+++.   +.++++|++|||||+..
T Consensus       258 ~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        258 LDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHHH---HhcCCCCEEEEcccccc
Confidence            66655   55778999999999864

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.81  E-value=3.1e-07  Score=73.28  Aligned_cols=188  Identities=13%  Similarity=0.038  Sum_probs=123.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +++-|.||||-.|..|++....+|+.|+.+.|++++....     ..+..++.|+.|++++.+.+.       ..|+||.
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-----~~~~i~q~Difd~~~~a~~l~-------g~DaVIs   68 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-----QGVTILQKDIFDLTSLASDLA-------GHDAVIS   68 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-----ccceeecccccChhhhHhhhc-------CCceEEE
Confidence            3688999999999999999999999999999999887654     245788999999999877666       7899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC----------ChhHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG----------SPAYTV  153 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~----------~~~Y~~  153 (302)
                      .-+....        ..+  +..        ....+++...+...+..|++.++..++..-.++          -..|..
T Consensus        69 A~~~~~~--------~~~--~~~--------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~  130 (211)
T COG2910          69 AFGAGAS--------DND--ELH--------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPE  130 (211)
T ss_pred             eccCCCC--------Chh--HHH--------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHH
Confidence            8775421        011  111        111445555555567889999987766543221          122444


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +++.. -+...|..+   .++.-+-++|...+-|+.+...  ...+.   +...  .-....++.+|-|-+++.-+..+
T Consensus       131 A~~~a-e~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlggD~---ll~n--~~G~SrIS~aDYAiA~lDe~E~~  200 (211)
T COG2910         131 ALAQA-EFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLGGDQ---LLVN--AKGESRISYADYAIAVLDELEKP  200 (211)
T ss_pred             HHHHH-HHHHHHhhc---cCcceEEeCcHHhcCCccccCceEeccce---EEEc--CCCceeeeHHHHHHHHHHHHhcc
Confidence            44433 445566644   4588889999888877443221  11110   0000  00024779999999988877544

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.75  E-value=2.6e-08  Score=82.85  Aligned_cols=209  Identities=16%  Similarity=0.078  Sum_probs=133.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH-HHHHh--------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-LACKL--------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      .|++||||-||-=|+.+++-|+.+||.|..+-|+.+.... ..+.+        +......-+|++|...+..++..+  
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--  105 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--  105 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc--
Confidence            3689999999999999999999999999988775543322 12222        356677889999999999999988  


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-----------
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-----------  142 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-----------  142 (302)
                         +++-+.|.|+-.+      ...+.|-.+-+-++...|++.++.++...-... +-++-..|++.-+           
T Consensus       106 ---kPtEiYnLaAQSH------VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~-~VrfYQAstSElyGkv~e~PQsE~  175 (376)
T KOG1372|consen  106 ---KPTEVYNLAAQSH------VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTE-KVRFYQASTSELYGKVQEIPQSET  175 (376)
T ss_pred             ---Cchhhhhhhhhcc------eEEEeecccceeeccchhhhhHHHHHHhcCccc-ceeEEecccHhhcccccCCCcccC
Confidence               7888999998543      233444445666778889999998888765433 2344444433211           


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHH---CCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH----hcc-------c
Q 044670          143 IAGIGSPAYTVSKYGIIALVKILAAEL---RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS----EMG-------N  208 (302)
Q Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~la~e~---~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~-------~  208 (302)
                      .|+.+.++|+++|.+.-.++-.++..|   +-.||-+|.=+|      .-...+..........+    ...       .
T Consensus       176 TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP------RRGenFVTRKItRsvakI~~gqqe~~~LGNL~  249 (376)
T KOG1372|consen  176 TPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP------RRGENFVTRKITRSVAKISLGQQEKIELGNLS  249 (376)
T ss_pred             CCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC------ccccchhhHHHHHHHHHhhhcceeeEEecchh
Confidence            123467899999977665555555443   334565555544      22222222111111111    000       0


Q ss_pred             cCCCCCCHHHHHHHHHHhccC
Q 044670          209 LRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~  229 (302)
                      -.+.++...|-.+++..++..
T Consensus       250 a~RDWGhA~dYVEAMW~mLQ~  270 (376)
T KOG1372|consen  250 ALRDWGHAGDYVEAMWLMLQQ  270 (376)
T ss_pred             hhcccchhHHHHHHHHHHHhc
Confidence            116688889999998777653

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.65  E-value=2.5e-07  Score=76.75  Aligned_cols=80  Identities=23%  Similarity=0.324  Sum_probs=64.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++++++|+||+|++|+.+++.|+++|++|++++|+.++.+.+.+.+.  .......+|..+.+++.+.+.       +.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~~   98 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------GA   98 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------cC
Confidence            468999999999999999999999999999999999888777666542  134456678888888777665       67


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|++...
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            988886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.65  E-value=1.8e-07  Score=82.46  Aligned_cols=80  Identities=20%  Similarity=0.297  Sum_probs=62.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCc---cHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQD---NLGQALACKLG---EDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~---~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +++|+++|||| ||+|++++..|++.|++ |++++|+.   ++.+++.+.+.   ..+.+..+|+++.+++.+.++    
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~----  198 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA----  198 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc----
Confidence            36899999999 79999999999999986 99999986   56666655552   234556788888777766555    


Q ss_pred             HcCCccEEEEcccCC
Q 044670           74 KYGKLDIMYNNAGIV   88 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~   88 (302)
                         ..|+||||..+.
T Consensus       199 ---~~DilINaTp~G  210 (289)
T PRK12548        199 ---SSDILVNATLVG  210 (289)
T ss_pred             ---cCCEEEEeCCCC
Confidence               569999988654

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.62  E-value=2e-07  Score=79.17  Aligned_cols=97  Identities=15%  Similarity=0.235  Sum_probs=64.3

Q ss_pred             EEEeCC-CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            6 AIITGG-ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         6 vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      =.||+. ||+||++++++|+++|++|++++|......    .....+.++.++  +   ..++.+.+.+.++.+|+||||
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~----~~~~~v~~i~v~--s---~~~m~~~l~~~~~~~DivIh~   88 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP----EPHPNLSIIEIE--N---VDDLLETLEPLVKDHDVLIHS   88 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC----CCCCCeEEEEEe--c---HHHHHHHHHHHhcCCCEEEeC
Confidence            345544 456999999999999999999987643110    011345555542  2   233334444445579999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTG  113 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~  113 (302)
                      ||+..  +.+....+.+++.+++++|...
T Consensus        89 AAvsd--~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         89 MAVSD--YTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CccCC--ceehhhhhhhhhhhhhhhhhhh
Confidence            99864  3466666788888998887654

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.60  E-value=3.2e-07  Score=75.94  Aligned_cols=251  Identities=16%  Similarity=0.149  Sum_probs=150.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHc-CC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHEN-GA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ..++||||+-|-+|..+|+.|-.+ |- .|++.+........+     ..--++-.|+.|..++++++-.     .+||-
T Consensus        44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~-----~~GPyIy~DILD~K~L~eIVVn-----~RIdW  113 (366)
T KOG2774|consen   44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT-----DVGPYIYLDILDQKSLEEIVVN-----KRIDW  113 (366)
T ss_pred             CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc-----ccCCchhhhhhccccHHHhhcc-----cccce
Confidence            457999999999999999988864 53 466655433332222     1224566799888887665532     27999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------------CC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------GS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------------~~  148 (302)
                      +||-.+..+.       .-.....-..++|+.|..++++.+.++     +-++..-|.++++.+..            +.
T Consensus       114 L~HfSALLSA-------vGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFVPSTIGAFGPtSPRNPTPdltIQRPR  181 (366)
T KOG2774|consen  114 LVHFSALLSA-------VGETNVPLALQVNIRGVHNILQVAAKH-----KLKVFVPSTIGAFGPTSPRNPTPDLTIQRPR  181 (366)
T ss_pred             eeeHHHHHHH-------hcccCCceeeeecchhhhHHHHHHHHc-----CeeEeecccccccCCCCCCCCCCCeeeecCc
Confidence            9997765431       111122345689999999998888775     23465566666665533            34


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEe-CCcccCCcc-cCCCC-CHHHHHHHHHh--ccccC-----CCCCCHHH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVS-PYGLVSGIS-SRNSI-NPAILEAFLSE--MGNLR-----GQVLNAEG  218 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~-PG~v~t~~~-~~~~~-~~~~~~~~~~~--~~~~~-----~~~~~~~d  218 (302)
                      ..|+.||.-.|.+.+.+..+   .|+.+.+.+ ||.+-...- ..... .-..+.....+  ...+.     -.++..+|
T Consensus       182 TIYGVSKVHAEL~GEy~~hr---Fg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~d  258 (366)
T KOG2774|consen  182 TIYGVSKVHAELLGEYFNHR---FGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTD  258 (366)
T ss_pred             eeechhHHHHHHHHHHHHhh---cCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHH
Confidence            57999999999999888866   577777775 666533111 00000 11122222211  11111     12567888


Q ss_pred             HHHHHHHhccCCCCCccccEEeeCCCcccCC--------------------------CCccccCCCccceeeccCCcccc
Q 044670          219 IANAALYLATDEASDVTGLNLVVDGGFSVAN--------------------------PSLMKFASPFHLIKAIGDGCRSF  272 (302)
Q Consensus       219 va~~~~~l~s~~~~~~~G~~~~~~gG~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~  272 (302)
                      +-.+++.++..++..+.-.++++.| ++..+                          .+..++..|...++..|.+.-++
T Consensus       259 c~~~~~~~~~a~~~~lkrr~ynvt~-~sftpee~~~~~~~~~p~~~i~y~~~srq~iad~wp~~~dds~ar~~wh~~h~~  337 (366)
T KOG2774|consen  259 CMASVIQLLAADSQSLKRRTYNVTG-FSFTPEEIADAIRRVMPGFEIDYDICTRQSIADSWPMSLDDSEARTEWHEKHSL  337 (366)
T ss_pred             HHHHHHHHHhCCHHHhhhheeeece-eccCHHHHHHHHHhhCCCceeecccchhhhhhhhcccccCchhHhhHHHHhhhh
Confidence            8888877776555555566677665 23111                          11334445666777777776655


Q ss_pred             chhHHHH
Q 044670          273 LGISFIA  279 (302)
Q Consensus       273 ~g~~~~~  279 (302)
                      --.+-+.
T Consensus       338 ~l~~~i~  344 (366)
T KOG2774|consen  338 HLLSIIS  344 (366)
T ss_pred             hHHHHHH
Confidence            4444444

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.57  E-value=1.7e-06  Score=78.32  Aligned_cols=168  Identities=14%  Similarity=0.139  Sum_probs=104.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcC-Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYG-KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~i   78 (302)
                      +-.+|+|+||||++|+-+++.|.++|+.|..+.|+..+........  ......+..|...+.+.   +..+.+..+ ..
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~---~~~~~~~~~~~~  154 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDI---LKKLVEAVPKGV  154 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccch---hhhhhhhccccc
Confidence            4568999999999999999999999999999999988877765411  11233344444444332   222222222 24


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      .+++-++|....     .+    +...-.++-+.|..+++.++..    .+..++|++||+...........+..  ...
T Consensus       155 ~~v~~~~ggrp~-----~e----d~~~p~~VD~~g~knlvdA~~~----aGvk~~vlv~si~~~~~~~~~~~~~~--~~~  219 (411)
T KOG1203|consen  155 VIVIKGAGGRPE-----EE----DIVTPEKVDYEGTKNLVDACKK----AGVKRVVLVGSIGGTKFNQPPNILLL--NGL  219 (411)
T ss_pred             eeEEecccCCCC-----cc----cCCCcceecHHHHHHHHHHHHH----hCCceEEEEEeecCcccCCCchhhhh--hhh
Confidence            466666664332     11    1222334556788888888855    45778999999887766554444441  111


Q ss_pred             HHHH-HHHHHHHCCCCcEEEEEeCCcccCC
Q 044670          159 IALV-KILAAELRQYGLRVNCVSPYGLVSG  187 (302)
Q Consensus       159 ~~~~-~~la~e~~~~gi~v~~v~PG~v~t~  187 (302)
                      ..-. +.....+...|+.-..|.||....+
T Consensus       220 ~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  220 VLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            1111 1222333457899999999888654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.54  E-value=1.6e-07  Score=85.63  Aligned_cols=110  Identities=21%  Similarity=0.199  Sum_probs=74.2

Q ss_pred             CCCCEEEEeCC---------------CCh-HHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG---------------ASG-IGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa---------------s~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      ++||++|||||               |+| +|.+++++|..+|++|+++.+.....      .+.  ....+|+++.+++
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~~--~~~~~~v~~~~~~  254 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TPP--GVKSIKVSTAEEM  254 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CCC--CcEEEEeccHHHH
Confidence            57899999999               566 99999999999999999987654321      112  2246799999888


Q ss_pred             -HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCC--HHHHHHHHHHHhhHHHHHHHHHHH
Q 044670           65 -TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP--KSDLDRVLAVNTTGGFLGAKHAAR  123 (302)
Q Consensus        65 -~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~  123 (302)
                       +++++++   ++.+|++|||||+...  .+....+  .....+.+.+|+.-+--++..+..
T Consensus       255 ~~~~~~~~---~~~~D~~i~~Aavsd~--~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       255 LEAALNEL---AKDFDIFISAAAVADF--KPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHhh---cccCCEEEEccccccc--cccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence             5555443   4679999999998653  2322111  111123455677666666666665

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.47  E-value=8.5e-07  Score=87.67  Aligned_cols=161  Identities=16%  Similarity=0.231  Sum_probs=125.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHH--H----HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQ--A----LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~--~----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      .|..+|+||-||.|.+++.-|..+|++ +++++|+--+..  .    ....-+.++.+-..|++..+..+.++++. .+.
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s-~kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEES-NKL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHh-hhc
Confidence            478899999999999999999999987 677787643321  1    11122455555556777777777776654 345


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++-.++|.|.+...  .-+++.+++.|++.-+..+.|+.++-+.-.+.-.  .-..+|..||.++-+++.+...|+-+.
T Consensus      1847 ~~vGGiFnLA~VLRD--~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG~aN 1922 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRD--GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYGLAN 1922 (2376)
T ss_pred             ccccchhhHHHHHHh--hhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccchhh
Confidence            788999999998876  5788899999999999999999998666555432  235689999999999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 044670          156 YGIIALVKILAAE  168 (302)
Q Consensus       156 ~a~~~~~~~la~e  168 (302)
                      .++|.++..-+.+
T Consensus      1923 S~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1923 SAMERICEQRRHE 1935 (2376)
T ss_pred             HHHHHHHHHhhhc
Confidence            9999999876544

>PRK09620 hypothetical protein; Provisional

Probab=98.46  E-value=2.7e-07  Score=78.28  Aligned_cols=83  Identities=18%  Similarity=0.161  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCC----------------ChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGA----------------SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas----------------~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||+||||+|.                |++|+++|++|+++|++|+++++.......... .+..+..+..    ..++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~-~~~~~~~V~s----~~d~   75 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN-NQLELHPFEG----IIDL   75 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC-CceeEEEEec----HHHH
Confidence            689999999885                999999999999999999988754221110000 0112222333    2222


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      .+.+.++.+. .++|++||+|++..
T Consensus        76 ~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         76 QDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHHHHHHhcc-cCCCEEEECccccc
Confidence            2233333321 25899999999854

>PLN00106 malate dehydrogenase

Probab=98.42  E-value=2e-06  Score=76.60  Aligned_cols=148  Identities=14%  Similarity=0.120  Sum_probs=97.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .++|.|||++|.+|..++..|+.++.  .++++++++...+.+ +...........++++.++..+.+.       ..|+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~-Dl~~~~~~~~i~~~~~~~d~~~~l~-------~aDi   89 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA-DVSHINTPAQVRGFLGDDQLGDALK-------GADL   89 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc-hhhhCCcCceEEEEeCCCCHHHHcC-------CCCE
Confidence            46899999999999999999997664  799999877222111 1000111112234444434444444       7899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-------------cCCCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-------------IAGIG  147 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-------------~~~~~  147 (302)
                      +|+.||....   +     ...+.+.+..|+.....+.+.+.++    +..++++++|.-..             .+.++
T Consensus        90 VVitAG~~~~---~-----g~~R~dll~~N~~i~~~i~~~i~~~----~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~  157 (323)
T PLN00106         90 VIIPAGVPRK---P-----GMTRDDLFNINAGIVKTLCEAVAKH----CPNALVNIISNPVNSTVPIAAEVLKKAGVYDP  157 (323)
T ss_pred             EEEeCCCCCC---C-----CCCHHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEeCCCccccHHHHHHHHHHcCCCCc
Confidence            9999996432   1     2346778889988877777666664    45567777775443             12445


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHC
Q 044670          148 SPAYTVSKYGIIALVKILAAELR  170 (302)
Q Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~  170 (302)
                      ...|+.+++-.+.|-..++.++.
T Consensus       158 ~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        158 KKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             ceEEEEecchHHHHHHHHHHHhC
Confidence            66789988778888889998864

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.41  E-value=1.6e-06  Score=78.44  Aligned_cols=77  Identities=25%  Similarity=0.410  Sum_probs=68.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++||.|+ |+||+.++..|+++| .+|++++|+.+++.++......+++.+++|..|.+++.++++       ..|++|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~-------~~d~VI   73 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIK-------DFDLVI   73 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHh-------cCCEEE
Confidence            57899999 999999999999999 899999999999988877766789999999999999888887       559999


Q ss_pred             EcccCC
Q 044670           83 NNAGIV   88 (302)
Q Consensus        83 ~~Ag~~   88 (302)
                      |++..+
T Consensus        74 n~~p~~   79 (389)
T COG1748          74 NAAPPF   79 (389)
T ss_pred             EeCCch
Confidence            988753

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.36  E-value=6e-06  Score=73.50  Aligned_cols=162  Identities=17%  Similarity=0.126  Sum_probs=99.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.++|.|||++|.||..++..|+.++  ..+++++++....+.+ +...........+.+|+.+..+.++       ..|
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~-Dl~~~~~~~~v~~~td~~~~~~~l~-------gaD   78 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAA-DLSHIDTPAKVTGYADGELWEKALR-------GAD   78 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCccccc-chhhcCcCceEEEecCCCchHHHhC-------CCC
Confidence            56789999999999999999999655  6799999832222111 1000111223345666544333444       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-------------cCCC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-------------IAGI  146 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-------------~~~~  146 (302)
                      ++|++||....        +.+.+.+.+..|+.....+++.+.+    .+..++|+++|....             .+.+
T Consensus        79 vVVitaG~~~~--------~~~tR~dll~~N~~i~~~i~~~i~~----~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p  146 (321)
T PTZ00325         79 LVLICAGVPRK--------PGMTRDDLFNTNAPIVRDLVAAVAS----SAPKAIVGIVSNPVNSTVPIAAETLKKAGVYD  146 (321)
T ss_pred             EEEECCCCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHH----HCCCeEEEEecCcHHHHHHHHHhhhhhccCCC
Confidence            99999996321        1124677888998877776666666    456678888875432             1234


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG  187 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~  187 (302)
                      ....|+.+-+=-..|-..+++.+   |+....|+ ++|.++
T Consensus       147 ~~~viG~g~LDs~R~r~~la~~l---~v~~~~V~-~~VlGe  183 (321)
T PTZ00325        147 PRKLFGVTTLDVVRARKFVAEAL---GMNPYDVN-VPVVGG  183 (321)
T ss_pred             hhheeechhHHHHHHHHHHHHHh---CcChhheE-EEEEee
Confidence            45567776333335666777664   44444554 444443

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=98.35  E-value=1.7e-06  Score=68.61  Aligned_cols=159  Identities=14%  Similarity=0.096  Sum_probs=104.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+++.++|.||||-.|..+.+++++.+  -+|+++.|++....+..    ..+.....|++..++....       +..+
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~----k~v~q~~vDf~Kl~~~a~~-------~qg~   84 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD----KVVAQVEVDFSKLSQLATN-------EQGP   84 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc----ceeeeEEechHHHHHHHhh-------hcCC
Confidence            578889999999999999999999988  46888888753322221    2344556677665543333       3379


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+++++-|.....      .   +.+..+.+..--.+.+.+.+..    .+-..+|.+||.++...  .+..|-..|.-+
T Consensus        85 dV~FcaLgTTRgk------a---GadgfykvDhDyvl~~A~~AKe----~Gck~fvLvSS~GAd~s--SrFlY~k~KGEv  149 (238)
T KOG4039|consen   85 DVLFCALGTTRGK------A---GADGFYKVDHDYVLQLAQAAKE----KGCKTFVLVSSAGADPS--SRFLYMKMKGEV  149 (238)
T ss_pred             ceEEEeecccccc------c---ccCceEeechHHHHHHHHHHHh----CCCeEEEEEeccCCCcc--cceeeeeccchh
Confidence            9999998865321      0   1122223333223344444444    56778999999877643  345788889777


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSR  191 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~  191 (302)
                      |.-+.+|--+      ++.+.+||.+..+....
T Consensus       150 E~~v~eL~F~------~~~i~RPG~ll~~R~es  176 (238)
T KOG4039|consen  150 ERDVIELDFK------HIIILRPGPLLGERTES  176 (238)
T ss_pred             hhhhhhcccc------EEEEecCcceecccccc
Confidence            7665555422      67889999998876543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=98.22  E-value=2.2e-05  Score=65.04  Aligned_cols=195  Identities=17%  Similarity=0.083  Sum_probs=125.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +.++-|+.++.|.++++.-...|+.|.++.|+..  ..+.+.....+.++..|.-...-.+....       ++..++-+
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~--k~~l~sw~~~vswh~gnsfssn~~k~~l~-------g~t~v~e~  124 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENEN--KQTLSSWPTYVSWHRGNSFSSNPNKLKLS-------GPTFVYEM  124 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeecccC--cchhhCCCcccchhhccccccCcchhhhc-------CCcccHHH
Confidence            4678899999999999999999999999998876  34455555666766666544332111121       56666666


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccCCCCChhHHHHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      +|.+.            ....+..+|-....+..+++.+    .+..++|++|.... ..+... ..|-.+|-+.|.-..
T Consensus       125 ~ggfg------------n~~~m~~ing~ani~a~kaa~~----~gv~~fvyISa~d~~~~~~i~-rGY~~gKR~AE~Ell  187 (283)
T KOG4288|consen  125 MGGFG------------NIILMDRINGTANINAVKAAAK----AGVPRFVYISAHDFGLPPLIP-RGYIEGKREAEAELL  187 (283)
T ss_pred             hcCcc------------chHHHHHhccHhhHHHHHHHHH----cCCceEEEEEhhhcCCCCccc-hhhhccchHHHHHHH
Confidence            66432            2356677777777777777777    56789999996543 222222 369999977664332


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCC-----CHHHHHHHHHhc----------cccCCCCCCHHHHHHHHHHhcc
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSI-----NPAILEAFLSEM----------GNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-----~~~~~~~~~~~~----------~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .      .++.+=..++||++++...-....     ..+.++...+..          .++....+.+++||.+++..++
T Consensus       188 ~------~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~  261 (283)
T KOG4288|consen  188 K------KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIE  261 (283)
T ss_pred             H------hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhcc
Confidence            2      234566789999999873322111     112222222111          1222457799999999999997


Q ss_pred             CCC
Q 044670          229 DEA  231 (302)
Q Consensus       229 ~~~  231 (302)
                      ++.
T Consensus       262 dp~  264 (283)
T KOG4288|consen  262 DPD  264 (283)
T ss_pred             CCC
Confidence            754

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.19  E-value=7.6e-06  Score=75.27  Aligned_cols=75  Identities=29%  Similarity=0.498  Sum_probs=61.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            6 AIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      |+|.|| |.+|+.+++.|++++-  +|++.+|+.++++.+.+. .+.++.++.+|+.|.+++.++++       ..|+||
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999999874  799999999999888766 46789999999999999888887       679999


Q ss_pred             EcccCC
Q 044670           83 NNAGIV   88 (302)
Q Consensus        83 ~~Ag~~   88 (302)
                      |+++..
T Consensus        73 n~~gp~   78 (386)
T PF03435_consen   73 NCAGPF   78 (386)
T ss_dssp             E-SSGG
T ss_pred             ECCccc
Confidence            999843

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.17  E-value=9.3e-06  Score=72.54  Aligned_cols=72  Identities=21%  Similarity=0.339  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-C-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-G-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|+++||||+|.||+.++++|+++ | .+++++.|+..++..+..++.      ..|+.   ++.+.+       ...
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~------~~~i~---~l~~~l-------~~a  216 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG------GGKIL---SLEEAL-------PEA  216 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc------cccHH---hHHHHH-------ccC
Confidence            57899999999999999999999865 5 589999998887777665442      12322   222222       368


Q ss_pred             cEEEEcccCC
Q 044670           79 DIMYNNAGIV   88 (302)
Q Consensus        79 d~lv~~Ag~~   88 (302)
                      |++||.++..
T Consensus       217 DiVv~~ts~~  226 (340)
T PRK14982        217 DIVVWVASMP  226 (340)
T ss_pred             CEEEECCcCC
Confidence            9999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.16  E-value=1.4e-05  Score=62.13  Aligned_cols=75  Identities=25%  Similarity=0.362  Sum_probs=58.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++++++|.|+ ||.|++++..|++.|++ |.++.|+.++++++.+.++ ..+.++.  +.+..   +...       ..
T Consensus        10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~--~~~~~---~~~~-------~~   76 (135)
T PF01488_consen   10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIP--LEDLE---EALQ-------EA   76 (135)
T ss_dssp             GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEE--GGGHC---HHHH-------TE
T ss_pred             cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceee--HHHHH---HHHh-------hC
Confidence            47999999998 99999999999999987 9999999999999988873 2344443  33332   2333       78


Q ss_pred             cEEEEcccCC
Q 044670           79 DIMYNNAGIV   88 (302)
Q Consensus        79 d~lv~~Ag~~   88 (302)
                      |++|++.+..
T Consensus        77 DivI~aT~~~   86 (135)
T PF01488_consen   77 DIVINATPSG   86 (135)
T ss_dssp             SEEEE-SSTT
T ss_pred             CeEEEecCCC
Confidence            9999998753

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.10  E-value=1.4e-05  Score=71.57  Aligned_cols=117  Identities=10%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEecCccH--HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG-------AKVVIADVQDNL--GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      -+++||||+|.+|.+++..|+..+       ..+++.++++..  +....-.+..-......|+....+..+.+      
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l------   76 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAF------   76 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHh------
Confidence            468999999999999999999844       589999986532  21110000000001111322223322223      


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ...|+|||+||....   +  ..+   -.+.++.|+.-.-.+.+.+.++-  ...+.++++|
T Consensus        77 -~~aDiVI~tAG~~~~---~--~~~---R~~l~~~N~~i~~~i~~~i~~~~--~~~~iiivvs  128 (325)
T cd01336          77 -KDVDVAILVGAMPRK---E--GME---RKDLLKANVKIFKEQGEALDKYA--KKNVKVLVVG  128 (325)
T ss_pred             -CCCCEEEEeCCcCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHhC--CCCeEEEEec
Confidence             378999999997532   1  222   35677777654444444444431  1245566665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.94  E-value=0.00016  Score=64.00  Aligned_cols=79  Identities=19%  Similarity=0.343  Sum_probs=56.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +|++++|+|+++++|..+++.+...|.+|+++++++++.+.+. .++..   ...|..+.+..+.+.+...  ..++|.+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  217 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGAD---AVFNYRAEDLADRILAATA--GQGVDVI  217 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCC---EEEeCCCcCHHHHHHHHcC--CCceEEE
Confidence            5789999999999999999999999999999998877666553 34332   1235555544444332221  1269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++++
T Consensus       218 i~~~~  222 (325)
T cd08253         218 IEVLA  222 (325)
T ss_pred             EECCc
Confidence            99887

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.93  E-value=3.8e-05  Score=72.06  Aligned_cols=75  Identities=23%  Similarity=0.350  Sum_probs=55.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|+++|+|+++ +|.++++.|+++|++|++.+++. +..+...+++ ...+.++..|..+.            ..+.+
T Consensus         3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~~   69 (450)
T PRK14106          3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------------FLEGV   69 (450)
T ss_pred             cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------------HhhcC
Confidence            4789999999877 99999999999999999999875 3333322322 12456777777651            12378


Q ss_pred             cEEEEcccCC
Q 044670           79 DIMYNNAGIV   88 (302)
Q Consensus        79 d~lv~~Ag~~   88 (302)
                      |+||+++|..
T Consensus        70 d~vv~~~g~~   79 (450)
T PRK14106         70 DLVVVSPGVP   79 (450)
T ss_pred             CEEEECCCCC
Confidence            9999999964

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.92  E-value=3.3e-05  Score=67.94  Aligned_cols=77  Identities=16%  Similarity=0.228  Sum_probs=65.9

Q ss_pred             EEEeCCCChHHHHHHHHHHH----cCCEEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            6 AIITGGASGIGAAAAKLFHE----NGAKVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~----~G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++|-||||+-|..+++++..    +|...-+++|+++++++.++...       ....++.+|.+|++++.+++.     
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak-----   82 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK-----   82 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh-----
Confidence            78999999999999999999    88999999999999988877652       223378899999999999888     


Q ss_pred             cCCccEEEEcccCCC
Q 044670           75 YGKLDIMYNNAGIVD   89 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~   89 (302)
                        +..+|+|++|.+.
T Consensus        83 --~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 --QARVIVNCVGPYR   95 (423)
T ss_pred             --hhEEEEeccccce
Confidence              4578999999753

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.82  E-value=0.00014  Score=59.58  Aligned_cols=78  Identities=29%  Similarity=0.391  Sum_probs=48.6

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||+||||+|                ||-.|.++|+.+..+|++|+++.....- ..     +..+..+  ++.+.++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~-----p~~~~~i--~v~sa~em   72 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSL-PP-----PPGVKVI--RVESAEEM   72 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------TTEEEE--E-SSHHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccc-cc-----cccceEE--Eecchhhh
Confidence            68999999976                6789999999999999999998766421 11     2344444  45555554


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                         .+.+.+....-|++|++|++..
T Consensus        73 ---~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   73 ---LEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             ---HHHHHHHGGGGSEEEE-SB--S
T ss_pred             ---hhhhccccCcceeEEEecchhh
Confidence               4444444455699999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.72  E-value=0.00025  Score=62.17  Aligned_cols=75  Identities=23%  Similarity=0.300  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|+++|+|+ ||+|++++.+|+..| .+|+++.|+.++.+++.+.+..... +..++    +..+.+       ...|
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~~~----~~~~~~-------~~~D  187 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AELDL----ELQEEL-------ADFD  187 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eeecc----cchhcc-------ccCC
Confidence            36889999997 999999999999999 7899999999888887776542110 11111    111112       2689


Q ss_pred             EEEEcccCC
Q 044670           80 IMYNNAGIV   88 (302)
Q Consensus        80 ~lv~~Ag~~   88 (302)
                      +|||+....
T Consensus       188 ivInaTp~g  196 (278)
T PRK00258        188 LIINATSAG  196 (278)
T ss_pred             EEEECCcCC
Confidence            999988654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.65  E-value=0.00023  Score=56.45  Aligned_cols=74  Identities=30%  Similarity=0.384  Sum_probs=54.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++++++|+|+ |++|.++++.|.+.| ++|++.+|+.++.+++.+.++..  .+..+.++.+++   +       ...|+
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~-------~~~Dv   84 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL--GIAIAYLDLEEL---L-------AEADL   84 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc--ccceeecchhhc---c-------ccCCE
Confidence            5789999998 899999999999996 78999999988877776655422  122344444332   2       37899


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      ||++....
T Consensus        85 vi~~~~~~   92 (155)
T cd01065          85 IINTTPVG   92 (155)
T ss_pred             EEeCcCCC
Confidence            99998753

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.64  E-value=0.00012  Score=63.90  Aligned_cols=76  Identities=18%  Similarity=0.261  Sum_probs=66.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      .++|-||+|+-|.-++++|+++|.+-.+.+|+..++..+...++.++..++++.  ++.+++.++       ..++|+|+
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~--p~~~~~~~~-------~~~VVlnc   78 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGV--PAALEAMAS-------RTQVVLNC   78 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCC--HHHHHHHHh-------cceEEEec
Confidence            578999999999999999999999999999999999999999987766666544  777777776       67999999


Q ss_pred             ccCCC
Q 044670           85 AGIVD   89 (302)
Q Consensus        85 Ag~~~   89 (302)
                      +|.+.
T Consensus        79 vGPyt   83 (382)
T COG3268          79 VGPYT   83 (382)
T ss_pred             ccccc
Confidence            99765

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.63  E-value=0.00093  Score=73.99  Aligned_cols=177  Identities=13%  Similarity=0.072  Sum_probs=112.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .++.++|++..++++.+++.+|.++|+.|+++...... ......++..+..+.+.-.|.+++..+++.+....+.++.+
T Consensus      1754 ~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 1832 (2582)
T TIGR02813      1754 SGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTAQIDGF 1832 (2582)
T ss_pred             cCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-cccccccccccccccccccchHHHHHHHHhhhccccccceE
Confidence            46778888888999999999999999999877422110 00001111222334455566778888888887777889999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH--------HH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY--------TV  153 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y--------~~  153 (302)
                      ||..+.......+....   .....-...+...|.+.|.+.+.+...+.+.++.+++..+..+..+...-        ..
T Consensus      1833 i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~ 1909 (2582)
T TIGR02813      1833 IHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAEL 1909 (2582)
T ss_pred             EEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccch
Confidence            99887542100011001   01111112334467778887776655556788889988766654332211        23


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPY  182 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG  182 (302)
                      ..+++.+++|+++.||.....|...+.|.
T Consensus      1910 ~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1910 NQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             hhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            57899999999999998766777777773

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.62  E-value=0.0013  Score=58.81  Aligned_cols=79  Identities=23%  Similarity=0.371  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+++++|+|+++++|.++++.+...|++|+++++++++.+.+ ...+..   ...|..+.+..+.+.+....  +++|++
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~d~~  239 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGAD---YVIDYRKEDFVREVRELTGK--RGVDVV  239 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---eEEecCChHHHHHHHHHhCC--CCCcEE
Confidence            478999999999999999999999999999999887766554 333321   22466666555554433321  369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      ++++|
T Consensus       240 i~~~g  244 (342)
T cd08266         240 VEHVG  244 (342)
T ss_pred             EECCc
Confidence            99987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd00704 MDH Malate dehydrogenase

Probab=97.60  E-value=0.00085  Score=60.04  Aligned_cols=112  Identities=12%  Similarity=0.094  Sum_probs=67.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH--H--HHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI--T--NLVDTAVA   73 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v--~--~~~~~~~~   73 (302)
                      +|.||||+|.+|..++..|+..|.       .+++.++++..         ...+....|+.|....  .  .+-....+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~~   72 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------KALEGVVMELQDCAFPLLKGVVITTDPEE   72 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------CccceeeeehhhhcccccCCcEEecChHH
Confidence            589999999999999999998662       58889887621         1223455666665200  0  00011223


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC--CCCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ--HKGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~~s  137 (302)
                      .+...|++|+.||....   +  ..+   -.+.+..|..    +++.+.+.+.+.  +.+.++++|
T Consensus        73 ~~~~aDiVVitAG~~~~---~--g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          73 AFKDVDVAILVGAFPRK---P--GME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HhCCCCEEEEeCCCCCC---c--CCc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeC
Confidence            33478999999996432   1  223   3456666754    455555555444  345555554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.58  E-value=0.00064  Score=60.83  Aligned_cols=112  Identities=13%  Similarity=0.137  Sum_probs=68.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHH-H-HH--HHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT-N-LV--DTAVA   73 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~-~-~~--~~~~~   73 (302)
                      +|.|+|++|.+|.+++..|+..|.       .+++.+++++..         ..+....|+.|..... . ..  ....+
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~---------~a~g~~~Dl~d~~~~~~~~~~~~~~~~~   71 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK---------VLEGVVMELMDCAFPLLDGVVPTHDPAV   71 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc---------ccceeEeehhcccchhcCceeccCChHH
Confidence            478999999999999999998653       588998865431         1234556666655111 0 00  01123


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC--CCCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ--HKGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~~s  137 (302)
                      .+...|++|++||....        +.+.+.+.+..|+.    +++.+.+.+.+.  ..+.++++|
T Consensus        72 ~~~~aDiVVitAG~~~~--------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        72 AFTDVDVAILVGAFPRK--------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             HhCCCCEEEEcCCCCCC--------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeC
Confidence            33478999999996431        12235677777755    455555555444  245566555

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.57  E-value=0.00035  Score=62.45  Aligned_cols=142  Identities=11%  Similarity=0.056  Sum_probs=87.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCccH--HHHHHHHhC-------CCeEEEEecCCCHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDNL--GQALACKLG-------EDVCYIHCDVTSEDEITN   66 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~--~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~   66 (302)
                      -++|.|+|++|.+|..++..|+..|.       .+++.+.++..  +....-.+.       .++.+   .-.+.     
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i---~~~~~-----   73 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI---TDDPN-----   73 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE---ecCcH-----
Confidence            46899999999999999999998874       68888885432  222111111       01111   10111     


Q ss_pred             HHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcc----
Q 044670           67 LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASAC----  140 (302)
Q Consensus        67 ~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~----  140 (302)
                            +.+..-|++|.+||....   +  ..+   -.+.+..|..    +++.+.+.+.+..  .+.++++|--.    
T Consensus        74 ------~~~~daDivvitaG~~~k---~--g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t  135 (322)
T cd01338          74 ------VAFKDADWALLVGAKPRG---P--GME---RADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNA  135 (322)
T ss_pred             ------HHhCCCCEEEEeCCCCCC---C--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHH
Confidence                  112268999999996431   2  223   3456777754    4555555554433  45666665211    


Q ss_pred             ----ccc-CCCCChhHHHHHHHHHHHHHHHHHHHC
Q 044670          141 ----TEI-AGIGSPAYTVSKYGIIALVKILAAELR  170 (302)
Q Consensus       141 ----~~~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (302)
                          -.. +.+....|+.+++--..|...+++.+.
T Consensus       136 ~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lg  170 (322)
T cd01338         136 LIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAG  170 (322)
T ss_pred             HHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence                011 255667899999999999999998864

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.57  E-value=0.0018  Score=58.15  Aligned_cols=76  Identities=29%  Similarity=0.461  Sum_probs=53.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--CccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~id~   80 (302)
                      |+++||+||+||+|...+....+.|++++++..++++.+ ....++....   .|..+++    +.+++.+..+  .+|+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~v---i~y~~~~----~~~~v~~~t~g~gvDv  214 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHV---INYREED----FVEQVRELTGGKGVDV  214 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEE---EcCCccc----HHHHHHHHcCCCCceE
Confidence            789999999999999888888889988777777666666 6666654322   2333333    3444444432  5999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      ++...|
T Consensus       215 v~D~vG  220 (326)
T COG0604         215 VLDTVG  220 (326)
T ss_pred             EEECCC
Confidence            999887

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.56  E-value=0.00026  Score=61.04  Aligned_cols=74  Identities=14%  Similarity=0.267  Sum_probs=56.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++|+|||+. |+.++++|.++|++|++..+++.....+...   ....+..+..|.+++.+++.+-     ++|+||+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~---g~~~v~~g~l~~~~l~~~l~~~-----~i~~VID   71 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIH---QALTVHTGALDPQELREFLKRH-----SIDILVD   71 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccccc---CCceEEECCCCHHHHHHHHHhc-----CCCEEEE
Confidence            47999999998 9999999999999999998887755444321   1223445677777776666543     7999999


Q ss_pred             ccc
Q 044670           84 NAG   86 (302)
Q Consensus        84 ~Ag   86 (302)
                      .+.
T Consensus        72 AtH   74 (256)
T TIGR00715        72 ATH   74 (256)
T ss_pred             cCC
Confidence            776

This enzyme was found to be a monomer by gel filtration.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.52  E-value=0.00037  Score=66.59  Aligned_cols=46  Identities=37%  Similarity=0.497  Sum_probs=41.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      ++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+.+.+.++
T Consensus       378 ~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        378 AGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            5789999999 699999999999999999999999888888776653

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.51  E-value=0.00045  Score=60.37  Aligned_cols=72  Identities=21%  Similarity=0.322  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+..  .....  ++   ++   .      .....|
T Consensus       116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~---~~---~------~~~~~D  180 (270)
T TIGR00507       116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SM---DE---L------PLHRVD  180 (270)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--ch---hh---h------cccCcc
Confidence            4789999998 7999999999999999999999998888777766532  11221  11   11   0      112689


Q ss_pred             EEEEcccCC
Q 044670           80 IMYNNAGIV   88 (302)
Q Consensus        80 ~lv~~Ag~~   88 (302)
                      +|||+.+..
T Consensus       181 ivInatp~g  189 (270)
T TIGR00507       181 LIINATSAG  189 (270)
T ss_pred             EEEECCCCC
Confidence            999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK06849 hypothetical protein; Provisional

Probab=97.48  E-value=0.0012  Score=60.86  Aligned_cols=83  Identities=19%  Similarity=0.266  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +.|+|||||++..+|.++++.|.+.|++|++++.+........... .....++..-.+++...+.+.++.+++ ++|+|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~-d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~v   80 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV-DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDLL   80 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh-hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCEE
Confidence            5789999999999999999999999999999988765443222222 222223223345655555566666665 58999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |-...
T Consensus        81 IP~~e   85 (389)
T PRK06849         81 IPTCE   85 (389)
T ss_pred             EECCh
Confidence            88664

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.46  E-value=0.0022  Score=58.16  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=54.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+||+|++|..++......|++|+.+++++++.+.+.+.++... ++  |-.+.+.+.+.+.++..  +.+|++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~-vi--~~~~~~~~~~~i~~~~~--~gvD~v  232 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDE-AF--NYKEEPDLDAALKRYFP--EGIDIY  232 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCE-EE--ECCCcccHHHHHHHHCC--CCcEEE
Confidence            47899999999999999988888899999998888777665554555422 22  32222233333333221  368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       233 ~d~vG  237 (348)
T PLN03154        233 FDNVG  237 (348)
T ss_pred             EECCC
Confidence            99887

>PRK05086 malate dehydrogenase; Provisional

Probab=97.46  E-value=0.0011  Score=59.18  Aligned_cols=116  Identities=17%  Similarity=0.144  Sum_probs=65.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH---cCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++++|.||+|+||.+++..|..   .++.+++.+|++.......+... .....+..  .+.+++.+.+       ...|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~~~~~~~i~~--~~~~d~~~~l-------~~~D   71 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSHIPTAVKIKG--FSGEDPTPAL-------EGAD   71 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhcCCCCceEEE--eCCCCHHHHc-------CCCC
Confidence            4789999999999999998855   34578888887542110011000 10111121  1111211122       2689


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      ++|.++|....   +  ..   .-.+.+..|......+++.+.+    .+..++|.+.|.-
T Consensus        72 iVIitaG~~~~---~--~~---~R~dll~~N~~i~~~ii~~i~~----~~~~~ivivvsNP  120 (312)
T PRK05086         72 VVLISAGVARK---P--GM---DRSDLFNVNAGIVKNLVEKVAK----TCPKACIGIITNP  120 (312)
T ss_pred             EEEEcCCCCCC---C--CC---CHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccCc
Confidence            99999997442   1  12   2356677776665555555555    4455677776643

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.41  E-value=0.0023  Score=57.25  Aligned_cols=79  Identities=23%  Similarity=0.346  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|+||+|++|..++......|++|+.+.+++++.+.+ ..++.. .++  |-.+.+...+.+.....  +++|++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~-~vi--~~~~~~~~~~~~~~~~~--~gvdvv  211 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFD-VAF--NYKTVKSLEETLKKASP--DGYDCY  211 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC-EEE--eccccccHHHHHHHhCC--CCeEEE
Confidence            478999999999999999888888999999998887766555 445532 222  33332233333333321  368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       212 ~d~~G  216 (325)
T TIGR02825       212 FDNVG  216 (325)
T ss_pred             EECCC
Confidence            99877

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.31  E-value=0.0039  Score=55.50  Aligned_cols=108  Identities=17%  Similarity=0.179  Sum_probs=67.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++|.|.|+ |++|+.++..|+..|  ++++++++++++.+.....+.       .......   .+.+.    +      
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~~----l------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYSD----C------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHHH----h------
Confidence            46889996 999999999999999  689999999888776655441       1122221   22221    2      


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ...|++|+++|....   +  ..+   -.+.++.|..-...+.+.+.++   ...+.++++|
T Consensus        67 -~~aDIVIitag~~~~---~--g~~---R~dll~~N~~i~~~~~~~i~~~---~~~~~vivvs  117 (306)
T cd05291          67 -KDADIVVITAGAPQK---P--GET---RLDLLEKNAKIMKSIVPKIKAS---GFDGIFLVAS  117 (306)
T ss_pred             -CCCCEEEEccCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence             268999999996432   1  223   3456666655444444444442   2355666665

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.29  E-value=0.0012  Score=57.93  Aligned_cols=76  Identities=9%  Similarity=0.055  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|+++|.|+ ||.|++++.+|++.|. +|.++.|+.++.+++.+.++.......  +...++...       .....|+
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~--~~~~~~~~~-------~~~~~Di  193 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR--LEGDSGGLA-------IEKAAEV  193 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee--ccchhhhhh-------cccCCCE
Confidence            6889999987 9999999999999996 699999999998888776643211111  111122111       1136899


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |||+...
T Consensus       194 VInaTp~  200 (282)
T TIGR01809       194 LVSTVPA  200 (282)
T ss_pred             EEECCCC
Confidence            9998775

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.27  E-value=0.0082  Score=46.98  Aligned_cols=108  Identities=19%  Similarity=0.241  Sum_probs=68.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +|.|+|++|.+|.+++..|...+  .++++.++++++++.....+       ........   .+.++    +.      
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~----~~------   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA----LK------   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG----GT------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc----cc------
Confidence            68899999999999999999987  46999999977665544333       11222222   33332    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ..|++|..||....     ...+   -.+.++.|..-...+.+.+.++-   ..+.++.++
T Consensus        69 -~aDivvitag~~~~-----~g~s---R~~ll~~N~~i~~~~~~~i~~~~---p~~~vivvt  118 (141)
T PF00056_consen   69 -DADIVVITAGVPRK-----PGMS---RLDLLEANAKIVKEIAKKIAKYA---PDAIVIVVT  118 (141)
T ss_dssp             -TESEEEETTSTSSS-----TTSS---HHHHHHHHHHHHHHHHHHHHHHS---TTSEEEE-S
T ss_pred             -cccEEEEecccccc-----cccc---HHHHHHHhHhHHHHHHHHHHHhC---CccEEEEeC
Confidence             68999999996432     1222   45667777665555555555542   345555554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.26  E-value=0.0016  Score=58.61  Aligned_cols=80  Identities=21%  Similarity=0.344  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+||+|++|..++..+...|++|+.+.+++++.+.+.+.++.. .++  |-.+.+++.+.+.++..  +++|++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~-~vi--~~~~~~~~~~~i~~~~~--~gvd~v  225 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFD-DAF--NYKEEPDLDAALKRYFP--NGIDIY  225 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCc-eeE--EcCCcccHHHHHHHhCC--CCcEEE
Confidence            4789999999999999999888889999999888877766665435432 222  32222233333333321  368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       226 ~d~~g  230 (338)
T cd08295         226 FDNVG  230 (338)
T ss_pred             EECCC
Confidence            99877

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.22  E-value=0.002  Score=56.59  Aligned_cols=45  Identities=29%  Similarity=0.412  Sum_probs=39.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL   47 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~   47 (302)
                      ++|+++|.|+ ||-|++++..|++.|. ++.++.|+.++.+++.+.+
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~  171 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI  171 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence            5789999998 9999999999999996 6889999998888887765

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.19  E-value=0.018  Score=50.92  Aligned_cols=69  Identities=22%  Similarity=0.376  Sum_probs=48.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.+++++|.|. |++|+.++..|.+.|++|++.+|+.+..... +..+.  .++  +   .+++.+.+       ...|+
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~--~~~--~---~~~l~~~l-------~~aDi  213 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGL--SPF--H---LSELAEEV-------GKIDI  213 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCC--eee--c---HHHHHHHh-------CCCCE
Confidence            36899999997 7899999999999999999999987654433 23332  222  1   12222222       36899


Q ss_pred             EEEcc
Q 044670           81 MYNNA   85 (302)
Q Consensus        81 lv~~A   85 (302)
                      +|+++
T Consensus       214 VI~t~  218 (296)
T PRK08306        214 IFNTI  218 (296)
T ss_pred             EEECC
Confidence            99965

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.14  E-value=0.0062  Score=55.66  Aligned_cols=75  Identities=29%  Similarity=0.392  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+++++|.|+ |.+|+..++.+...|++|++++|+.++.+.+....+..   +..+..+.+.+.+.+.       ..|++
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~---v~~~~~~~~~l~~~l~-------~aDvV  234 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGR---IHTRYSNAYEIEDAVK-------RADLL  234 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCce---eEeccCCHHHHHHHHc-------cCCEE
Confidence            4567899987 89999999999999999999999888776665554432   2335566666554443       67999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |+++++
T Consensus       235 I~a~~~  240 (370)
T TIGR00518       235 IGAVLI  240 (370)
T ss_pred             EEcccc
Confidence            998865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.12  E-value=0.0031  Score=55.54  Aligned_cols=79  Identities=29%  Similarity=0.454  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+++++|+|+++++|..++..+...|++|++++++++..+.+ ..++..   ...|..+.+..+++.+ ... .+++|.+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~-~~~-~~~~d~v  212 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD---VAINYRTEDFAEEVKE-ATG-GRGVDVI  212 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC---EEEeCCchhHHHHHHH-HhC-CCCeEEE
Confidence            478999999999999999999999999999999887766655 334422   1234444333233222 211 1369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      ++++|
T Consensus       213 i~~~g  217 (323)
T cd05276         213 LDMVG  217 (323)
T ss_pred             EECCc
Confidence            99888

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.12  E-value=0.0016  Score=61.09  Aligned_cols=77  Identities=32%  Similarity=0.361  Sum_probs=50.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+++|||+++ +|.++++.|++.|++|++.+++........+.+. ..+.++..+  +...+   .+      ..+|
T Consensus         3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~~d   70 (447)
T PRK02472          3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------EDFD   70 (447)
T ss_pred             cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------CcCC
Confidence            4689999999976 9999999999999999999876543222222221 123333221  12211   11      1489


Q ss_pred             EEEEcccCCC
Q 044670           80 IMYNNAGIVD   89 (302)
Q Consensus        80 ~lv~~Ag~~~   89 (302)
                      .||+++|+..
T Consensus        71 ~vV~s~gi~~   80 (447)
T PRK02472         71 LMVKNPGIPY   80 (447)
T ss_pred             EEEECCCCCC
Confidence            9999999754

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.08  E-value=0.0026  Score=58.83  Aligned_cols=74  Identities=15%  Similarity=0.241  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+++|.|+ |++|+.+++.|++.|. +++++.|+.++.+.+.+.++. ...+.     .++..+.+       ...|
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~-~~~~~-----~~~l~~~l-------~~aD  244 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN-ASAHY-----LSELPQLI-------KKAD  244 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC-CeEec-----HHHHHHHh-------ccCC
Confidence            46899999998 9999999999999995 699999998888888776642 11211     12222223       3689


Q ss_pred             EEEEcccCC
Q 044670           80 IMYNNAGIV   88 (302)
Q Consensus        80 ~lv~~Ag~~   88 (302)
                      +||++.+..
T Consensus       245 iVI~aT~a~  253 (414)
T PRK13940        245 IIIAAVNVL  253 (414)
T ss_pred             EEEECcCCC
Confidence            999998853

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.08  E-value=0.0011  Score=55.18  Aligned_cols=46  Identities=30%  Similarity=0.444  Sum_probs=40.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL   47 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (302)
                      |+||+++|+|.. .+|+++++.|.+.|++|++.+++.++.+...+.+
T Consensus        26 l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          26 LEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            578999999994 8999999999999999999999887777766554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.08  E-value=0.0041  Score=55.41  Aligned_cols=74  Identities=27%  Similarity=0.438  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+.+++|+||++++|.++++.+...|++|+.+.+++++.+.+ ..++.. ..+  |.   +++   .+.+. +...+|++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~--~~---~~~---~~~~~-~~~~~d~v  230 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGAD-YVI--DG---SKF---SEDVK-KLGGADVV  230 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCc-EEE--ec---HHH---HHHHH-hccCCCEE
Confidence            477899999999999999999999999999998877665554 333321 122  22   112   22222 22379999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      ++++|
T Consensus       231 ~~~~g  235 (332)
T cd08259         231 IELVG  235 (332)
T ss_pred             EECCC
Confidence            99987

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.07  E-value=0.0027  Score=55.91  Aligned_cols=42  Identities=19%  Similarity=0.288  Sum_probs=36.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL   43 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   43 (302)
                      ++||+++|.|. |++|+.+++.|...|++|++..|+.++....
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            47899999999 7799999999999999999999987655443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.07  E-value=0.017  Score=54.81  Aligned_cols=110  Identities=18%  Similarity=0.172  Sum_probs=70.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHH------------HHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED------------EITNLVD   69 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~------------~v~~~~~   69 (302)
                      .+.+|+|+|+ |.+|...+..+...|++|+++++++++.+... .++.  +++..|..+.+            ...+...
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA--~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGA--EFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--eEEEeccccccccccchhhhcchhHHHHHH
Confidence            4788999988 89999999999999999999999988776554 4554  33333433211            1111112


Q ss_pred             HH-HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           70 TA-VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        70 ~~-~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                      +. .+..+..|++|.+++....   +                  .+..+++..+..|+  +.++||.++.
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~---~------------------aP~lit~~~v~~mk--pGgvIVdvg~  286 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGK---P------------------APKLITAEMVASMK--PGSVIVDLAA  286 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcc---c------------------CcchHHHHHHHhcC--CCCEEEEEcc
Confidence            22 2223469999999996331   0                  02222455666664  4678888875

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.06  E-value=0.0032  Score=53.37  Aligned_cols=74  Identities=24%  Similarity=0.361  Sum_probs=58.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~id~lv   82 (302)
                      +.++|.|+ |-+|+.+|+.|.++|++|++++++++..++....- ...+.+.+|-+|++.++++ ++       ..|++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~-~~~~~v~gd~t~~~~L~~agi~-------~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE-LDTHVVIGDATDEDVLEEAGID-------DADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh-cceEEEEecCCCHHHHHhcCCC-------cCCEEE
Confidence            45677776 77899999999999999999999999887743311 3568889999999886665 33       678888


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      -..+
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            8666

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.06  E-value=0.0024  Score=56.11  Aligned_cols=46  Identities=30%  Similarity=0.355  Sum_probs=40.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~   48 (302)
                      ++|+++|.|+ ||.|++++..|+..|. +|++++|+.++.+.+.+.++
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            5789999998 8899999999999997 79999999998888877653

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.02  E-value=0.016  Score=50.34  Aligned_cols=35  Identities=20%  Similarity=0.412  Sum_probs=29.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~   36 (302)
                      |++.+|+|.|+ ||+|.++++.|++.| -++++++.+
T Consensus        28 L~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         28 FADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             hcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            46778899876 899999999999999 678887654

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.02  E-value=0.0032  Score=56.69  Aligned_cols=78  Identities=23%  Similarity=0.361  Sum_probs=53.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      |+++||+||+|++|..++......|+ +|+.+++++++.+.+.+.++... ++  |-.+ +++.+.+.++..  +++|++
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~-vi--~~~~-~~~~~~i~~~~~--~gvd~v  228 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDA-AI--NYKT-DNVAERLRELCP--EGVDVY  228 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcE-EE--ECCC-CCHHHHHHHHCC--CCceEE
Confidence            38999999999999999888888998 79999888877766655565422 22  3222 223233333321  369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       229 id~~g  233 (345)
T cd08293         229 FDNVG  233 (345)
T ss_pred             EECCC
Confidence            99877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.95  E-value=0.0024  Score=60.32  Aligned_cols=71  Identities=23%  Similarity=0.312  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+.+.+..+..  .  .++.+   ..        .....|+
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~--~--~~~~~---~~--------~l~~~Di  393 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK--A--FPLES---LP--------ELHRIDI  393 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc--e--echhH---hc--------ccCCCCE
Confidence            36899999996 79999999999999999999999888777766554321  1  12111   11        1236899


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |||+...
T Consensus       394 VInatP~  400 (477)
T PRK09310        394 IINCLPP  400 (477)
T ss_pred             EEEcCCC
Confidence            9998764

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.94  E-value=0.0082  Score=54.11  Aligned_cols=77  Identities=26%  Similarity=0.403  Sum_probs=51.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc---------------------cHHHHHHHH---hC--CCeEE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQD---------------------NLGQALACK---LG--EDVCY   53 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~---------------------~~~~~~~~~---~~--~~~~~   53 (302)
                      |++++|+|.|+ ||+|.++++.|++.|. ++++++++.                     .+.+.+.+.   ++  .+++.
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            46789999997 8899999999999997 788887753                     233333222   23  33555


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 044670           54 IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        54 ~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      +..|++ .+.++++++       ..|++|.+..
T Consensus       101 ~~~~~~-~~~~~~~~~-------~~DlVid~~D  125 (338)
T PRK12475        101 VVTDVT-VEELEELVK-------EVDLIIDATD  125 (338)
T ss_pred             EeccCC-HHHHHHHhc-------CCCEEEEcCC
Confidence            666765 344444443       6788887653

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.92  E-value=0.009  Score=55.53  Aligned_cols=72  Identities=26%  Similarity=0.479  Sum_probs=54.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++...+.+.++..  .+.     .++..+.+.       ..|
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~--~i~-----~~~l~~~l~-------~aD  242 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE--AVK-----FEDLEEYLA-------EAD  242 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe--Eee-----HHHHHHHHh-------hCC
Confidence            36899999997 999999999999999 78999999988877777665431  222     223333343       679


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|.+.+.
T Consensus       243 vVi~aT~s  250 (417)
T TIGR01035       243 IVISSTGA  250 (417)
T ss_pred             EEEECCCC
Confidence            99998774

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.91  E-value=0.06  Score=46.59  Aligned_cols=236  Identities=15%  Similarity=0.129  Sum_probs=126.2

Q ss_pred             CCEEEEeCCCChHHHHH--HHHHHHcCCEEEEE--ecC-----c--------cHHHHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            3 GKVAIITGGASGIGAAA--AKLFHENGAKVVIA--DVQ-----D--------NLGQALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         3 gk~vlVTGas~gIG~~i--a~~l~~~G~~V~~~--~r~-----~--------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      .|+|||.|+|+|.|++.  +.++- .|++.+.+  .|.     +        ....+..++.+--..-+..|.-+.+.-+
T Consensus        41 PKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          41 PKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            47899999999988753  33332 45665544  221     1        1122333333444566788998888888


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCC-CCCC-------------------------------CCCCCCHHHHHHHHHHHhhH
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVD-RGFA-------------------------------SVLDTPKSDLDRVLAVNTTG  113 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~-~~~~-------------------------------~~~~~~~~~~~~~~~~n~~~  113 (302)
                      .+++.++..+|++|.+|..-+... ..+.                               .++..+.++++.+..+.=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            999999999999999988654321 1100                               12333445555554432111


Q ss_pred             HH-HHHHHHHHhhccCCCCEEEEEcCcccccCCC--CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCccc
Q 044670          114 GF-LGAKHAARVMIPQHKGCILFTASACTEIAGI--GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISS  190 (302)
Q Consensus       114 ~~-~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~  190 (302)
                      -+ +.+.+++..-.-....+-+..|-++.....+  -...-+.+|.=++.-++.+...++..|=+.++...=.+.|....
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqASs  279 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQASS  279 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhhh
Confidence            11 2234444322112334445444443333222  22356899999999999999998877655554433344443332


Q ss_pred             CCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          191 RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      .-...+-.+...++-+    +.-..-|-+-+-+-.|.++.-  ..|+.+.+|...
T Consensus       280 aIP~~plYla~lfkvM----Kekg~HEgcIeQi~rlfse~l--y~g~~~~~D~e~  328 (398)
T COG3007         280 AIPMMPLYLAILFKVM----KEKGTHEGCIEQIDRLFSEKL--YSGSKIQLDDEG  328 (398)
T ss_pred             ccccccHHHHHHHHHH----HHcCcchhHHHHHHHHHHHHh--hCCCCCCcCccc
Confidence            2222222222222222    223345666666666765432  136555555543

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.91  E-value=0.0086  Score=52.08  Aligned_cols=106  Identities=16%  Similarity=0.201  Sum_probs=72.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~id   79 (302)
                      .|.|++|++|+|..|. ++-++++ +|++|+.+.-.+++..-+.+.++...   ..|-..+    ++.+.+.+..+ .||
T Consensus       150 ~GetvvVSaAaGaVGs-vvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~---~idyk~~----d~~~~L~~a~P~GID  221 (340)
T COG2130         150 AGETVVVSAAAGAVGS-VVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDA---GIDYKAE----DFAQALKEACPKGID  221 (340)
T ss_pred             CCCEEEEEecccccch-HHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCce---eeecCcc----cHHHHHHHHCCCCeE
Confidence            5899999999999997 5555554 89999999988888887777665321   1233333    23445555544 699


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~  145 (302)
                      +.+-|.|.      +                      ++.++++.|  +..+||+..+-++.+...
T Consensus       222 vyfeNVGg------~----------------------v~DAv~~~l--n~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         222 VYFENVGG------E----------------------VLDAVLPLL--NLFARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEcCCc------h----------------------HHHHHHHhh--ccccceeeeeehhhcCCC
Confidence            99999993      1                      123455555  346789988877666543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.90  E-value=0.0084  Score=55.86  Aligned_cols=72  Identities=28%  Similarity=0.473  Sum_probs=53.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+...++..  .+     +.++..+.+.       ..|
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~--~~-----~~~~~~~~l~-------~aD  244 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE--AI-----PLDELPEALA-------EAD  244 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc--Ee-----eHHHHHHHhc-------cCC
Confidence            36789999987 9999999999999997 7999999988887777766431  11     2233333332       679


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|.+.+.
T Consensus       245 vVI~aT~s  252 (423)
T PRK00045        245 IVISSTGA  252 (423)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.86  E-value=0.023  Score=50.81  Aligned_cols=110  Identities=14%  Similarity=0.167  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++++|.|+|+ |.+|.+++..|+..|.  .+++.+++++.+......+.      .......   .+.++    ++    
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~~~----~~----   72 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDYSD----CK----   72 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCHHH----hC----
Confidence            4678999998 9999999999999986  79999998887665544332      1122211   12111    22    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                         ..|++|..||....   +  ..+.   .+.++.|..-...++..+.++   ...+.++++|
T Consensus        73 ---~adivIitag~~~k---~--g~~R---~dll~~N~~i~~~i~~~i~~~---~~~~~vivvs  122 (315)
T PRK00066         73 ---DADLVVITAGAPQK---P--GETR---LDLVEKNLKIFKSIVGEVMAS---GFDGIFLVAS  122 (315)
T ss_pred             ---CCCEEEEecCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEEcc
Confidence               68999999997432   1  2233   455666654433333333332   2356666666

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.86  E-value=0.011  Score=54.30  Aligned_cols=89  Identities=22%  Similarity=0.370  Sum_probs=65.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|++||.|| |-+|.-++++|+++| .+|+++.|+.+++..+.+.++.       +....+.+...+.       ..|
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-------~~~~l~el~~~l~-------~~D  240 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-------EAVALEELLEALA-------EAD  240 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-------eeecHHHHHHhhh-------hCC
Confidence            57899999998 778999999999999 6789999999999999988762       2222333333333       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVN  110 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n  110 (302)
                      +||...|.      |..-.+.+.++..+..+
T Consensus       241 vVissTsa------~~~ii~~~~ve~a~~~r  265 (414)
T COG0373         241 VVISSTSA------PHPIITREMVERALKIR  265 (414)
T ss_pred             EEEEecCC------CccccCHHHHHHHHhcc
Confidence            99998874      44445666666555443

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.86  E-value=0.0041  Score=54.38  Aligned_cols=76  Identities=21%  Similarity=0.286  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEE-EEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCY-IHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|++++|.|| ||-+++++.+|++.|. +++++.|+.++++++.+.++..... ...+..+.+..+           ..|
T Consensus       125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~~~-----------~~d  192 (283)
T COG0169         125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEGLE-----------EAD  192 (283)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccccc-----------ccC
Confidence            4789999987 8899999999999994 7999999999999988877532211 122333332211           369


Q ss_pred             EEEEcccCCC
Q 044670           80 IMYNNAGIVD   89 (302)
Q Consensus        80 ~lv~~Ag~~~   89 (302)
                      +|||+....-
T Consensus       193 liINaTp~Gm  202 (283)
T COG0169         193 LLINATPVGM  202 (283)
T ss_pred             EEEECCCCCC
Confidence            9999887643

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.86  E-value=0.0059  Score=57.15  Aligned_cols=77  Identities=29%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||+||||+|                ||-.|.++|+++..+|++|+++.-....      ..+..+.++.  +.+.   
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~------~~p~~v~~i~--V~ta---  322 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDL------ADPQGVKVIH--VESA---  322 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCC------CCCCCceEEE--ecCH---
Confidence            57999999976                5779999999999999999988632211      0123344443  3344   


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      +++.+.+.+.+. .|++|++|++..
T Consensus       323 ~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        323 RQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             HHHHHHHHhhCC-CCEEEEeccccc
Confidence            444555555544 699999999864

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.85  E-value=0.0066  Score=49.50  Aligned_cols=69  Identities=23%  Similarity=0.250  Sum_probs=47.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++.|.|. |.||+++++.|...|++|+..+|+.........   ..+   .  ..   ++++++.       ..|+
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~---~~~---~--~~---~l~ell~-------~aDi   94 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE---FGV---E--YV---SLDELLA-------QADI   94 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH---TTE---E--ES---SHHHHHH-------H-SE
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccc---ccc---e--ee---ehhhhcc-------hhhh
Confidence            57999999976 999999999999999999999998876552211   111   1  12   2334455       4699


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      |+++....
T Consensus        95 v~~~~plt  102 (178)
T PF02826_consen   95 VSLHLPLT  102 (178)
T ss_dssp             EEE-SSSS
T ss_pred             hhhhhccc
Confidence            98877654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.82  E-value=0.027  Score=47.88  Aligned_cols=35  Identities=26%  Similarity=0.457  Sum_probs=28.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |++++|+|.|. ||+|.++++.|++.|. ++++++.+
T Consensus         9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35678899876 8999999999999995 67777653

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.79  E-value=0.0099  Score=52.35  Aligned_cols=47  Identities=19%  Similarity=0.329  Sum_probs=37.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCcc---HHHHHHHHhC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDN---LGQALACKLG   48 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~~   48 (302)
                      +++|+++|.|+ ||-+++++..|+..|. ++.++.|+.+   +++.+.+.++
T Consensus       122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            36899999997 7779999999999996 7899999853   6666666553

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.77  E-value=0.039  Score=52.27  Aligned_cols=82  Identities=21%  Similarity=0.259  Sum_probs=57.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCC-------------HHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS-------------EDEITNLV   68 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-------------~~~v~~~~   68 (302)
                      .+.+++|.|+ |.+|...+..+...|+.|++++++.++.+... .++.  +++..|..+             .+..+...
T Consensus       163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa--~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~  238 (511)
T TIGR00561       163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGA--EFLELDFKEEGGSGDGYAKVMSEEFIAAEM  238 (511)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCC--eEEeccccccccccccceeecCHHHHHHHH
Confidence            3568999996 99999999999999999999999888665444 3543  445555422             23333334


Q ss_pred             HHHHHHcCCccEEEEcccC
Q 044670           69 DTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~   87 (302)
                      +.+.+.....|++|+++-+
T Consensus       239 ~~~~e~~~~~DIVI~Tali  257 (511)
T TIGR00561       239 ELFAAQAKEVDIIITTALI  257 (511)
T ss_pred             HHHHHHhCCCCEEEECccc
Confidence            4444555679999998843

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.76  E-value=0.0086  Score=53.43  Aligned_cols=71  Identities=28%  Similarity=0.476  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++.+.++.  ..+     +.+++.+.+.       ..|+
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~--~~~-----~~~~~~~~l~-------~aDv  241 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG--NAV-----PLDELLELLN-------EADV  241 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC--eEE-----eHHHHHHHHh-------cCCE
Confidence            6899999988 999999999999876 5788999998888888777654  222     2233333333       5799


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.+.+.
T Consensus       242 Vi~at~~  248 (311)
T cd05213         242 VISATGA  248 (311)
T ss_pred             EEECCCC
Confidence            9998874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.75  E-value=0.0071  Score=56.78  Aligned_cols=61  Identities=20%  Similarity=0.224  Sum_probs=48.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL   67 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~   67 (302)
                      ++++|.|+ |.+|+++++.|.++|+.|++++++++..+.+.+.  ..+.++.+|.++++.++++
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~--~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR--LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh--cCEEEEEeCCCCHHHHHHc
Confidence            36888987 9999999999999999999999988877766542  2456777888877665444

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.72  E-value=0.0077  Score=53.71  Aligned_cols=78  Identities=21%  Similarity=0.338  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|+||+|++|..+++.....|++|+.+.+++++.+.+.+ ++.. .++  |-.+++..++ +.++..  +.+|++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~-~vi--~~~~~~~~~~-v~~~~~--~gvd~v  215 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFD-AVF--NYKTVSLEEA-LKEAAP--DGIDCY  215 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC-EEE--eCCCccHHHH-HHHHCC--CCcEEE
Confidence            47899999999999999988888899999999888777665544 5432 222  3333322222 222221  368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       216 ld~~g  220 (329)
T cd08294         216 FDNVG  220 (329)
T ss_pred             EECCC
Confidence            98777

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PLN00203 glutamyl-tRNA reductase

Probab=96.70  E-value=0.014  Score=55.52  Aligned_cols=75  Identities=17%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++++++|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+.+.++. ......+   .++....+.       ..|
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g-~~i~~~~---~~dl~~al~-------~aD  331 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPD-VEIIYKP---LDEMLACAA-------EAD  331 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCC-CceEeec---HhhHHHHHh-------cCC
Confidence            35899999999 9999999999999996 699999999988888776632 1111112   223333333       679


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +||.+.+.
T Consensus       332 VVIsAT~s  339 (519)
T PLN00203        332 VVFTSTSS  339 (519)
T ss_pred             EEEEccCC
Confidence            99987764

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.69  E-value=0.011  Score=52.19  Aligned_cols=79  Identities=29%  Similarity=0.411  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+|+++++|..++..+...|++|+++.++++..+.+ ...+... +  .+..+.+....+.+ ... ..++|.+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~-~--~~~~~~~~~~~~~~-~~~-~~~~d~~  212 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADI-A--INYREEDFVEVVKA-ETG-GKGVDVI  212 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcE-E--EecCchhHHHHHHH-HcC-CCCeEEE
Confidence            478999999999999999999999999999998887766544 4443221 1  23333333222222 111 1259999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      ++++|
T Consensus       213 i~~~~  217 (325)
T TIGR02824       213 LDIVG  217 (325)
T ss_pred             EECCc
Confidence            99887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.67  E-value=0.0035  Score=42.68  Aligned_cols=31  Identities=29%  Similarity=0.485  Sum_probs=22.5

Q ss_pred             CEEEEeCCCChHHHH--HHHHHHHcCCEEEEEec
Q 044670            4 KVAIITGGASGIGAA--AAKLFHENGAKVVIADV   35 (302)
Q Consensus         4 k~vlVTGas~gIG~~--ia~~l~~~G~~V~~~~r   35 (302)
                      |+|||+|+|+|.|++  |+.++ ..|++.+.+..
T Consensus        40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f   72 (78)
T PF12242_consen   40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF   72 (78)
T ss_dssp             SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred             ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence            899999999999999  55555 67888887754

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.64  E-value=0.02  Score=50.96  Aligned_cols=113  Identities=16%  Similarity=0.125  Sum_probs=66.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCE--EEEEecCc--cHHHHHHHHhCCCeEE----EEecCC-CHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAK--VVIADVQD--NLGQALACKLGEDVCY----IHCDVT-SEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~--~~~~~~~~~~~~~~~~----~~~Dl~-~~~~v~~~~~~~~~~   74 (302)
                      +++.|+|++|.+|..++..|+..|..  |++++|++  ++++.....+......    .....+ |.+   + +.     
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~~---~-l~-----   71 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDLS---D-VA-----   71 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCHH---H-hC-----
Confidence            37899999999999999999999864  99999854  3332222111100000    011111 211   1 22     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                        ..|++|.++|....     ...+   -.+.++.|..-.....+.+.+..   ..+.++++++
T Consensus        72 --~aDiViitag~p~~-----~~~~---r~dl~~~n~~i~~~~~~~i~~~~---~~~~viv~~n  122 (309)
T cd05294          72 --GSDIVIITAGVPRK-----EGMS---RLDLAKKNAKIVKKYAKQIAEFA---PDTKILVVTN  122 (309)
T ss_pred             --CCCEEEEecCCCCC-----CCCC---HHHHHHHHHHHHHHHHHHHHHHC---CCeEEEEeCC
Confidence              68999999996331     1222   24556667665555555555542   3566777775

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.61  E-value=0.025  Score=43.16  Aligned_cols=76  Identities=20%  Similarity=0.244  Sum_probs=55.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-cCCEEEE-EecCc----------------------cHHHHHHHHhCCCeEEEEecCCC
Q 044670            5 VAIITGGASGIGAAAAKLFHE-NGAKVVI-ADVQD----------------------NLGQALACKLGEDVCYIHCDVTS   60 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~Dl~~   60 (302)
                      +|.|.|++|-+|+.+++.+.+ .|.+++. ++|+.                      +..+++.+.    .. +..|+|.
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~----~D-VvIDfT~   76 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE----AD-VVIDFTN   76 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-----S-EEEEES-
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc----CC-EEEEcCC
Confidence            689999999999999999999 7788655 45655                      223333332    22 5669999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccC
Q 044670           61 EDEITNLVDTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        61 ~~~v~~~~~~~~~~~~~id~lv~~Ag~   87 (302)
                      ++.+.+.++...++  ++.+|+-+.|+
T Consensus        77 p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   77 PDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             hHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999988887  77889888884

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.61  E-value=0.013  Score=43.85  Aligned_cols=71  Identities=24%  Similarity=0.217  Sum_probs=53.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA   85 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~A   85 (302)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.+.   .+.++.+|.++++.++++--      .+.+.+|...
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~---~~~~i~gd~~~~~~l~~a~i------~~a~~vv~~~   70 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE---GVEVIYGDATDPEVLERAGI------EKADAVVILT   70 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT---TSEEEES-TTSHHHHHHTTG------GCESEEEEES
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc---ccccccccchhhhHHhhcCc------cccCEEEEcc
Confidence            467777 5799999999999888999999999887776653   37889999999988554321      2677777755


Q ss_pred             c
Q 044670           86 G   86 (302)
Q Consensus        86 g   86 (302)
                      .
T Consensus        71 ~   71 (116)
T PF02254_consen   71 D   71 (116)
T ss_dssp             S
T ss_pred             C
Confidence            4

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.60  E-value=0.015  Score=50.94  Aligned_cols=73  Identities=22%  Similarity=0.283  Sum_probs=55.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFH-ENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVT-SEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~~id   79 (302)
                      .|+++-|+|+.| ||. ++-+++ +-|++|+++++..++.++..+.++.+.  + .|.+ |++.++++.+       ..|
T Consensus       181 pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~--f-v~~~~d~d~~~~~~~-------~~d  248 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADV--F-VDSTEDPDIMKAIMK-------TTD  248 (360)
T ss_pred             CCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcce--e-EEecCCHHHHHHHHH-------hhc
Confidence            489999999988 996 555555 579999999999988888888887643  2 2556 7887777666       456


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      .++|.+.
T Consensus       249 g~~~~v~  255 (360)
T KOG0023|consen  249 GGIDTVS  255 (360)
T ss_pred             Ccceeee
Confidence            6776654

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.57  E-value=0.015  Score=50.01  Aligned_cols=77  Identities=27%  Similarity=0.420  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+|+++ +|..++..+...|.+|+++++++++.+.+ ...+.. ..  .|..+.+....+.   ....+.+|++
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~~~~~~~---~~~~~~~d~v  205 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KELGAD-HV--IDYKEEDLEEELR---LTGGGGADVV  205 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCc-ee--ccCCcCCHHHHHH---HhcCCCCCEE
Confidence            478999999998 99999999999999999999887665554 333321 12  2333333333322   2223479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++++
T Consensus       206 i~~~~  210 (271)
T cd05188         206 IDAVG  210 (271)
T ss_pred             EECCC
Confidence            99887

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.56  E-value=0.013  Score=51.90  Aligned_cols=79  Identities=24%  Similarity=0.394  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++++|+|+++++|..++..+...|++|+.+.++.++.+.+ ...+. -.++  |.......+.+.+ ... ...+|.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~-~~~~--~~~~~~~~~~~~~-~~~-~~~~d~v  217 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGA-AHVI--VTDEEDLVAEVLR-ITG-GKGVDVV  217 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCC-CEEE--ecCCccHHHHHHH-HhC-CCCceEE
Confidence            478999999999999999999999999999998887766655 33432 1222  2222222222222 211 1259999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++++
T Consensus       218 i~~~~  222 (328)
T cd08268         218 FDPVG  222 (328)
T ss_pred             EECCc
Confidence            99887

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.54  E-value=0.02  Score=51.21  Aligned_cols=73  Identities=22%  Similarity=0.367  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+|+. |+|...++.....|++|++++|++++.+... +++... +  .|-+|++.++.+-+       ..|++
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~-~--i~~~~~~~~~~~~~-------~~d~i  233 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADH-V--INSSDSDALEAVKE-------IADAI  233 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcE-E--EEcCCchhhHHhHh-------hCcEE
Confidence            38899999998 9998666666669999999999988876554 444332 2  23345555444333       28999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+++
T Consensus       234 i~tv~  238 (339)
T COG1064         234 IDTVG  238 (339)
T ss_pred             EECCC
Confidence            99887

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.53  E-value=0.016  Score=52.40  Aligned_cols=78  Identities=28%  Similarity=0.401  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH-cCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK-YGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~id~   80 (302)
                      +|+.+||.||+||+|.+.++.....|+..+++.++++..+ +.+.++..   ...|-.+++-    .+++.+. .+++|+
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-l~k~lGAd---~vvdy~~~~~----~e~~kk~~~~~~Dv  228 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-LVKKLGAD---EVVDYKDENV----VELIKKYTGKGVDV  228 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-HHHHcCCc---EeecCCCHHH----HHHHHhhcCCCccE
Confidence            5789999999999999999888889955555555555443 44455432   2336666443    3434332 457999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |+.+.|.
T Consensus       229 VlD~vg~  235 (347)
T KOG1198|consen  229 VLDCVGG  235 (347)
T ss_pred             EEECCCC
Confidence            9999984

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.52  E-value=0.026  Score=50.96  Aligned_cols=35  Identities=34%  Similarity=0.560  Sum_probs=31.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |+.++|+|.|+ ||+|.++++.|++.|. ++.+++.+
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46778999998 8999999999999997 78888875

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.49  E-value=0.048  Score=50.37  Aligned_cols=42  Identities=26%  Similarity=0.511  Sum_probs=36.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL   43 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   43 (302)
                      +.|++|+|.|+ |.||+.+++.+...|++|+++++++.+....
T Consensus       200 l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A  241 (413)
T cd00401         200 IAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQA  241 (413)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHH
Confidence            46899999998 6899999999999999999999987776544

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.48  E-value=0.014  Score=52.05  Aligned_cols=79  Identities=23%  Similarity=0.373  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|.|+++++|..++..+.+.|++|+.+.++.++.+.+.+.++.. .++  |..+.+..++ +.+...  +++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~-v~~~~~--~~~d~v  218 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD-AAI--NYKTPDLAEA-LKEAAP--DGIDVY  218 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc-eEE--ecCChhHHHH-HHHhcc--CCceEE
Confidence            4689999999999999999999999999999988877766554434431 222  2333332222 222221  469999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.|
T Consensus       219 i~~~g  223 (329)
T cd05288         219 FDNVG  223 (329)
T ss_pred             EEcch
Confidence            99877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.47  E-value=0.028  Score=46.82  Aligned_cols=35  Identities=34%  Similarity=0.531  Sum_probs=30.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |++++|+|.| .||+|.++++.|+..|. ++++++.+
T Consensus        19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            4678899998 58999999999999996 78888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.45  E-value=0.068  Score=48.31  Aligned_cols=46  Identities=24%  Similarity=0.430  Sum_probs=38.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE   49 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   49 (302)
                      .|++++|.|+ |++|..++..+...|++|+++++++++.+.+ +.++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga  211 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGA  211 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCC
Confidence            4789999999 9999999998889999999998888776654 44554

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.45  E-value=0.021  Score=51.57  Aligned_cols=75  Identities=23%  Similarity=0.374  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .+++... +  .|..+. ++.+    +.+..+.+|+
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~-~~~~----~~~~~g~~D~  238 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADK-L--VNPQND-DLDH----YKAEKGYFDV  238 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcE-E--ecCCcc-cHHH----HhccCCCCCE
Confidence            4789999986 9999999988888998 588888887776544 4465432 2  243332 2222    2222346999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.++|
T Consensus       239 vid~~G  244 (343)
T PRK09880        239 SFEVSG  244 (343)
T ss_pred             EEECCC
Confidence            999888

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.41  E-value=0.017  Score=59.16  Aligned_cols=76  Identities=13%  Similarity=0.202  Sum_probs=61.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC-CE-------------EEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG-AK-------------VVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      .|+|+|.|+ |.||+..++.|++.. +.             |.+++++.+.++.+.+... ++..+..|.+|.+++.+++
T Consensus       569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~-~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE-NAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC-CCceEEeecCCHHHHHHhh
Confidence            578999997 999999999999753 33             7788888888877766552 4677899999999877776


Q ss_pred             HHHHHHcCCccEEEEcccC
Q 044670           69 DTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~   87 (302)
                      +       ++|+||++...
T Consensus       647 ~-------~~DaVIsalP~  658 (1042)
T PLN02819        647 S-------QVDVVISLLPA  658 (1042)
T ss_pred             c-------CCCEEEECCCc
Confidence            6       68999998764

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.40  E-value=0.037  Score=44.07  Aligned_cols=68  Identities=19%  Similarity=0.343  Sum_probs=42.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.||+++|.|= |.+|+.+|++|...|++|+++.+++-++-+...   ..++..     +   +++++.       ..|+
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~---dGf~v~-----~---~~~a~~-------~adi   81 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAM---DGFEVM-----T---LEEALR-------DADI   81 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHH---TT-EEE---------HHHHTT-------T-SE
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhh---cCcEec-----C---HHHHHh-------hCCE
Confidence            47999999986 899999999999999999999998755433222   223322     1   222333       5788


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.+.|-
T Consensus        82 ~vtaTG~   88 (162)
T PF00670_consen   82 FVTATGN   88 (162)
T ss_dssp             EEE-SSS
T ss_pred             EEECCCC
Confidence            8888773

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=96.37  E-value=0.041  Score=49.25  Aligned_cols=117  Identities=14%  Similarity=0.081  Sum_probs=63.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCc--cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQD--NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      -+|.|+|++|.+|.+++..|+..|.       .+++.++++  +++......+..-.....-+..    +.   ....+.
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~----i~---~~~~~~   76 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVV----AT---TDPEEA   76 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcE----Ee---cChHHH
Confidence            3689999999999999999998883       788998854  3233322222110000000100    00   001111


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ....|++|.+||....   +  ..   .-.+.+..|..-.-.+.+.+.++-.  +.+.++++|
T Consensus        77 ~~daDvVVitAG~~~k---~--g~---tR~dll~~Na~i~~~i~~~i~~~~~--~~~iiivvs  129 (323)
T TIGR01759        77 FKDVDAALLVGAFPRK---P--GM---ERADLLSKNGKIFKEQGKALNKVAK--KDVKVLVVG  129 (323)
T ss_pred             hCCCCEEEEeCCCCCC---C--CC---cHHHHHHHHHHHHHHHHHHHHhhCC--CCeEEEEeC
Confidence            2267999999996431   1  22   3456777775544444444444321  145555555

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.34  E-value=0.016  Score=50.87  Aligned_cols=35  Identities=29%  Similarity=0.449  Sum_probs=32.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV   35 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   35 (302)
                      ++||+++|.|+++-.|+.++..|+++|++|+++.|
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            47999999999999999999999999999988876

>PRK04148 hypothetical protein; Provisional

Probab=96.33  E-value=0.0092  Score=45.97  Aligned_cols=56  Identities=16%  Similarity=0.154  Sum_probs=45.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED   62 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~   62 (302)
                      +++++++.|..  -|.+++..|++.|++|++++.++...+...+.   .+.++..|+.++.
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~---~~~~v~dDlf~p~   71 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL---GLNAFVDDLFNPN   71 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh---CCeEEECcCCCCC
Confidence            45779999986  67789999999999999999999876665442   4578888988765

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.30  E-value=0.025  Score=49.20  Aligned_cols=77  Identities=18%  Similarity=0.276  Sum_probs=49.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC----CEEEEEecCccHHHHHHHHhCCCeEEE-EecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            6 AIITGGASGIGAAAAKLFHENG----AKVVIADVQDNLGQALACKLGEDVCYI-HCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|+||+|.+|..++..|+..|    .++++.++++++++.....+..-.... ...++-..+..+.++       ..|+
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~-------~aDi   73 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFK-------DADV   73 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhC-------CCCE
Confidence            4689998899999999999999    789999998877665444332111110 111111111222233       6899


Q ss_pred             EEEcccCCC
Q 044670           81 MYNNAGIVD   89 (302)
Q Consensus        81 lv~~Ag~~~   89 (302)
                      +|..+|...
T Consensus        74 Vv~t~~~~~   82 (263)
T cd00650          74 VIITAGVGR   82 (263)
T ss_pred             EEECCCCCC
Confidence            999998643

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.27  E-value=0.013  Score=47.18  Aligned_cols=37  Identities=24%  Similarity=0.434  Sum_probs=33.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||+++|.|++.-+|..+++.|.++|++|.++.|+.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            5799999999977789999999999999999988763

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.20  E-value=0.059  Score=50.42  Aligned_cols=40  Identities=23%  Similarity=0.469  Sum_probs=35.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      +.||+++|.|.+ .||+.+++.|...|++|+++.+++.+..
T Consensus       252 LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a~  291 (476)
T PTZ00075        252 IAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICAL  291 (476)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhHH
Confidence            579999999975 6999999999999999999988766543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.18  E-value=0.09  Score=47.63  Aligned_cols=73  Identities=22%  Similarity=0.430  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC---ccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|++++|+|+ |++|...+..+...|++|++++|+   +++. ++.+.++..  .+  |..+. .+.+    . ...+.+
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~-~~~~~~Ga~--~v--~~~~~-~~~~----~-~~~~~~  239 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKA-DIVEELGAT--YV--NSSKT-PVAE----V-KLVGEF  239 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHH-HHHHHcCCE--Ee--cCCcc-chhh----h-hhcCCC
Confidence            4789999986 999999998888899999999884   3333 345555543  22  33332 2222    1 122468


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |++|.+.|
T Consensus       240 d~vid~~g  247 (355)
T cd08230         240 DLIIEATG  247 (355)
T ss_pred             CEEEECcC
Confidence            99999888

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.10  E-value=0.1  Score=40.33  Aligned_cols=75  Identities=25%  Similarity=0.431  Sum_probs=49.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC-------------------ccHHHHHHHH---hC--CCeEEEEec
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ-------------------DNLGQALACK---LG--EDVCYIHCD   57 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~-------------------~~~~~~~~~~---~~--~~~~~~~~D   57 (302)
                      .++|+|.|+ |++|.++++.|+..|. ++++++.+                   ..+.+.+.+.   .+  .++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            578888887 8999999999999997 57777542                   1233333332   22  456666677


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 044670           58 VTSEDEITNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        58 l~~~~~v~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      + +++...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 4455555554       6798888654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.10  E-value=0.031  Score=49.61  Aligned_cols=77  Identities=26%  Similarity=0.345  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .+.+++|+|+++++|..++..+...|++|+.+.++.++.+.+ +.++.. .+  .|..+.+..+.    +.+..  .++|
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~~~~~----~~~~~~~~~~d  213 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGAD-VA--VDYTRPDWPDQ----VREALGGGGVT  213 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCC-EE--EecCCccHHHH----HHHHcCCCCce
Confidence            467899999999999999999999999999998887776655 444432 12  23334333222    22222  2599


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      .++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.07  E-value=0.036  Score=51.34  Aligned_cols=41  Identities=24%  Similarity=0.484  Sum_probs=36.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA   42 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   42 (302)
                      +.||+++|.|. |.||+.++..|...|++|+++++++.+...
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~  250 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQ  250 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHH
Confidence            47999999997 799999999999999999999998776543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.06  E-value=0.025  Score=49.79  Aligned_cols=77  Identities=21%  Similarity=0.213  Sum_probs=54.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++.|.|.++-+|+.++..|.++|++|++..+......+..+.    ..++..=+.+++.+...+-       +...
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~----ADIVIsavg~~~~v~~~~i-------k~Ga  225 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQ----ADIVVAAVGRPRLIDADWL-------KPGA  225 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhc----CCEEEEecCChhcccHhhc-------cCCc
Confidence            5799999999999999999999999999999997766554444332    2344444566666555441       4556


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      +|-..|+.
T Consensus       226 iVIDvgin  233 (301)
T PRK14194        226 VVIDVGIN  233 (301)
T ss_pred             EEEEeccc
Confidence            66666654

>PRK05442 malate dehydrogenase; Provisional

Probab=96.05  E-value=0.055  Score=48.53  Aligned_cols=112  Identities=9%  Similarity=0.052  Sum_probs=64.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCcc--HHHHHHHHhCCCeEEEEecCCCHHHHH----HHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDN--LGQALACKLGEDVCYIHCDVTSEDEIT----NLVD   69 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~~~~~~~~~~Dl~~~~~v~----~~~~   69 (302)
                      -++|.|+|++|.+|..++..|+..|.       .+++.++++.  ++..           ...|+.+.....    .+-.
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g-----------~a~Dl~~~~~~~~~~~~i~~   72 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEG-----------VVMELDDCAFPLLAGVVITD   72 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccce-----------eehhhhhhhhhhcCCcEEec
Confidence            46899999999999999999998773       6888887543  2221           122222211000    0000


Q ss_pred             HHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-C-CCCEEEEEc
Q 044670           70 TAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-Q-HKGCILFTA  137 (302)
Q Consensus        70 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~iv~~s  137 (302)
                      ...+.+..-|++|.+||....   +  ..   +-.+.+..|..    +++.+.+.+.+ . ..+.++++|
T Consensus        73 ~~y~~~~daDiVVitaG~~~k---~--g~---tR~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         73 DPNVAFKDADVALLVGARPRG---P--GM---ERKDLLEANGA----IFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             ChHHHhCCCCEEEEeCCCCCC---C--CC---cHHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeC
Confidence            111222368999999996431   1  22   34566777754    45555555544 2 245566665

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.04  E-value=0.055  Score=49.62  Aligned_cols=35  Identities=26%  Similarity=0.426  Sum_probs=29.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++++
T Consensus       133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            35678888866 8999999999999997 68888776

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.03  E-value=0.029  Score=45.01  Aligned_cols=82  Identities=18%  Similarity=0.152  Sum_probs=57.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----------CCCeEEEEecCCCHHHHHHHHHH--H
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----------GEDVCYIHCDVTSEDEITNLVDT--A   71 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~--~   71 (302)
                      ++|-+.|- |-+|..+++.|+++|++|.+.+|++++.+.+.+.-          -....++..=+.+.+++++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45677776 89999999999999999999999988877765431          02234555567888999998887  6


Q ss_pred             HHHcCCccEEEEccc
Q 044670           72 VAKYGKLDIMYNNAG   86 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag   86 (302)
                      .....+=+++|....
T Consensus        81 ~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   81 LAGLRPGKIIIDMST   95 (163)
T ss_dssp             GGGS-TTEEEEE-SS
T ss_pred             hhccccceEEEecCC
Confidence            655444455665443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=96.01  E-value=0.076  Score=45.10  Aligned_cols=34  Identities=26%  Similarity=0.531  Sum_probs=27.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEec
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADV   35 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r   35 (302)
                      |++++|+|.|+ ||+|.++++.|+..|. ++++++.
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            45778999985 8999999999999996 5666643

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.00  E-value=0.058  Score=47.99  Aligned_cols=112  Identities=19%  Similarity=0.194  Sum_probs=64.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLG---EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|.|+|++|.+|.+++..|+.+|  ..+++++.+  +++...-.+.   ......... .+ +++       .+.+...|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch-------HHhcCCCC
Confidence            68899999999999999999888  468888887  2211111111   001111110 00 111       11223689


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                      ++|.+||....   |  ..   .-.+.++.|..-...+.+.+.++   ...+.++++|-
T Consensus        71 ivvitaG~~~k---~--g~---tR~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtN  118 (310)
T cd01337          71 VVVIPAGVPRK---P--GM---TRDDLFNINAGIVRDLATAVAKA---CPKALILIISN  118 (310)
T ss_pred             EEEEeCCCCCC---C--CC---CHHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccC
Confidence            99999996431   1  22   24567777866655555555554   23556666663

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.00  E-value=0.014  Score=44.67  Aligned_cols=83  Identities=18%  Similarity=0.263  Sum_probs=50.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHhC-----------CCeEEEEecCCCHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKLG-----------EDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~-----------~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      ++-|.|+ |-+|.++++.|.+.|+.|..+ +|+....+.....++           ...+.+-+-+.|. .+..+++++.
T Consensus        12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La   89 (127)
T PF10727_consen   12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLA   89 (127)
T ss_dssp             EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHH
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHH
Confidence            5778888 889999999999999999877 465555554443331           2233333333443 6777788776


Q ss_pred             HH--cCCccEEEEcccCCC
Q 044670           73 AK--YGKLDIMYNNAGIVD   89 (302)
Q Consensus        73 ~~--~~~id~lv~~Ag~~~   89 (302)
                      ..  ..+=.+|+|+.|...
T Consensus        90 ~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   90 QYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             CC--S-TT-EEEES-SS--
T ss_pred             HhccCCCCcEEEECCCCCh
Confidence            54  333468999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.00  E-value=0.039  Score=49.55  Aligned_cols=77  Identities=18%  Similarity=0.255  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++++|+|+ |++|..++..+...|++ |+++++++++.+.+ ..++.. .+  .|..+.+ .+++.+ +.. ..++|+
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~-~~--i~~~~~~-~~~~~~-~~~-~~~~d~  234 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGAD-FV--INSGQDD-VQEIRE-LTS-GAGADV  234 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC-EE--EcCCcch-HHHHHH-HhC-CCCCCE
Confidence            4789999986 89999999988899999 99888887766544 455532 12  2444433 333222 211 126999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.+.|
T Consensus       235 vid~~g  240 (339)
T cd08239         235 AIECSG  240 (339)
T ss_pred             EEECCC
Confidence            999887

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=95.98  E-value=0.055  Score=49.35  Aligned_cols=78  Identities=19%  Similarity=0.291  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++++|+|+ |+||...+......|+ +|+.+++++++.+.+ +.++...   ..|..+ .+++.+.+.++..  +.+|
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~---~i~~~~~~~~~~~~v~~~~~--~g~d  257 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD---CVNPNDYDKPIQEVIVEITD--GGVD  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe---EEcccccchhHHHHHHHHhC--CCCC
Confidence            4789999985 9999998888888998 799888887776655 4455322   224332 2233333333322  3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       258 ~vid~~G  264 (368)
T TIGR02818       258 YSFECIG  264 (368)
T ss_pred             EEEECCC
Confidence            9999888

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=95.94  E-value=0.037  Score=51.96  Aligned_cols=76  Identities=24%  Similarity=0.280  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ..++++|.|+ |.+|+.+++.|.+.|++|++++++++..+.+.+.. ....++.+|.++++.++++--      .+.|.+
T Consensus       230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~-~~~~~i~gd~~~~~~L~~~~~------~~a~~v  301 (453)
T PRK09496        230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL-PNTLVLHGDGTDQELLEEEGI------DEADAF  301 (453)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC-CCCeEEECCCCCHHHHHhcCC------ccCCEE
Confidence            3578999999 99999999999999999999999988777665543 345678899999887544321      256777


Q ss_pred             EEcc
Q 044670           82 YNNA   85 (302)
Q Consensus        82 v~~A   85 (302)
                      |...
T Consensus       302 i~~~  305 (453)
T PRK09496        302 IALT  305 (453)
T ss_pred             EECC
Confidence            7544

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=95.94  E-value=0.034  Score=49.37  Aligned_cols=77  Identities=17%  Similarity=0.185  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|.+++|.|+++.+|..++......|++|+.+.++.++.+.+.+ .+.. .++  +-.+.+.    .+++.+..  .++|
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~----~~~i~~~~~~~~~d  210 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-LGIG-PVV--STEQPGW----QDKVREAAGGAPIS  210 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-cCCC-EEE--cCCCchH----HHHHHHHhCCCCCc
Confidence            47899999999999999999999999999999888777666644 4331 222  2233222    22222222  2599


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       211 ~v~d~~g  217 (324)
T cd08292         211 VALDSVG  217 (324)
T ss_pred             EEEECCC
Confidence            9999887

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=95.94  E-value=0.058  Score=49.11  Aligned_cols=74  Identities=23%  Similarity=0.383  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.|+ |+||..++..+...|++|++++.+.++.....+.++.. .++  |..+.+.+.+       ..+.+|++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~-~vi--~~~~~~~~~~-------~~~~~D~v  251 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGAD-SFL--VSTDPEKMKA-------AIGTMDYI  251 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCc-EEE--cCCCHHHHHh-------hcCCCCEE
Confidence            4789999775 99999999888889999988887776655555555532 122  3333332222       12368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.+.|
T Consensus       252 id~~g  256 (360)
T PLN02586        252 IDTVS  256 (360)
T ss_pred             EECCC
Confidence            98877

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.93  E-value=0.063  Score=48.94  Aligned_cols=78  Identities=17%  Similarity=0.263  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+++|.|+ |+||...+..+...|+ +|+.+++++++.+.+ +.++.. .+  .|..+. +++.+.+.++..  +.+|
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~-~~--i~~~~~~~~~~~~v~~~~~--~g~d  258 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGAT-DC--VNPKDHDKPIQQVLVEMTD--GGVD  258 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCC-EE--EcccccchHHHHHHHHHhC--CCCc
Confidence            4789999975 9999999998889999 688898888876654 455542 22  243332 234443443322  3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       259 ~vid~~g  265 (368)
T cd08300         259 YTFECIG  265 (368)
T ss_pred             EEEECCC
Confidence            9999887

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.92  E-value=0.11  Score=44.76  Aligned_cols=35  Identities=23%  Similarity=0.514  Sum_probs=29.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |++++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            46789999998 9999999999999995 57776543

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=95.92  E-value=0.038  Score=49.14  Aligned_cols=76  Identities=17%  Similarity=0.224  Sum_probs=51.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++++|.|+++++|..++......|++|+.+.+++++.+.+ ..++.. .+  .|..+. . .+.+....  .+.+|.++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v--~~~~~~-~-~~~~~~~~--~~~~d~vl  218 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAK-EV--IPREEL-Q-EESIKPLE--KQRWAGAV  218 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCC-EE--EcchhH-H-HHHHHhhc--cCCcCEEE
Confidence            57999999999999999999999999999999888776665 445431 12  222222 1 12222221  23589998


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      .+.|
T Consensus       219 d~~g  222 (326)
T cd08289         219 DPVG  222 (326)
T ss_pred             ECCc
Confidence            8776

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK08655 prephenate dehydrogenase; Provisional

Probab=95.89  E-value=0.067  Score=50.06  Aligned_cols=40  Identities=28%  Similarity=0.518  Sum_probs=34.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      ++.|.||+|.+|.++++.|.+.|++|++.+|+++......
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a   41 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA   41 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence            6899999999999999999999999999999876654433

>PLN02928 oxidoreductase family protein

Probab=95.85  E-value=0.068  Score=48.43  Aligned_cols=37  Identities=30%  Similarity=0.314  Sum_probs=33.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.||++.|.|- |.||+++++.|...|++|++.+|+..
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            57999999987 99999999999999999999988643

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.85  E-value=0.045  Score=48.79  Aligned_cols=78  Identities=24%  Similarity=0.411  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|.|+++.+|..++......|.+|+.+.+++++.+.+ ..++.. .++  |..+. +..+.+.....  +.+|.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v~--~~~~~-~~~~~~~~~~~--~~vd~v  211 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD-RPI--NYKTE-DLGEVLKKEYP--KGVDVV  211 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc-eEE--eCCCc-cHHHHHHHhcC--CCCeEE
Confidence            478999999999999999998889999999998877766555 445431 222  32232 22222332222  368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.|
T Consensus       212 ~~~~g  216 (329)
T cd08250         212 YESVG  216 (329)
T ss_pred             EECCc
Confidence            98776

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.81  E-value=0.026  Score=47.59  Aligned_cols=41  Identities=20%  Similarity=0.285  Sum_probs=36.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      ++.|.||+|.+|.++++.|++.|++|++.+|++++.+.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            68999999999999999999999999999998887766544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=95.81  E-value=0.075  Score=48.69  Aligned_cols=74  Identities=20%  Similarity=0.345  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.|+ |++|..++......|++|+++++++++..+..+.++... +  .|..+.+.+.+       ..+.+|++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~-~--i~~~~~~~v~~-------~~~~~D~v  246 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADS-F--LVTTDSQKMKE-------AVGTMDFI  246 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcE-E--EcCcCHHHHHH-------hhCCCcEE
Confidence            4789999986 899999999888899999998877665444555555421 2  23333322221       22368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       247 id~~G  251 (375)
T PLN02178        247 IDTVS  251 (375)
T ss_pred             EECCC
Confidence            99887

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.80  E-value=0.075  Score=46.88  Aligned_cols=76  Identities=30%  Similarity=0.401  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +|.+++|.|+++.+|..++......|++|+.+.+++++.+.+ ..++.. .++. +  +. +..+.+.+.   -.++|.+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~~-~--~~-~~~~~i~~~---~~~~d~v  212 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGAD-EVVI-D--DG-AIAEQLRAA---PGGFDKV  212 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCc-EEEe-c--Cc-cHHHHHHHh---CCCceEE
Confidence            478999999999999999999999999999998887766555 444432 2221 2  22 222222222   2369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.|
T Consensus       213 l~~~~  217 (320)
T cd08243         213 LELVG  217 (320)
T ss_pred             EECCC
Confidence            99877

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=95.78  E-value=0.085  Score=45.96  Aligned_cols=79  Identities=19%  Similarity=0.355  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +|+|++|.||+|..|. ++=+|+. .|+.|+...-+.++..-+...++....   .|--++.++.+++.+...+  .||+
T Consensus       153 ~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~a---fNYK~e~~~~~aL~r~~P~--GIDi  226 (343)
T KOG1196|consen  153 KGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDA---FNYKEESDLSAALKRCFPE--GIDI  226 (343)
T ss_pred             CCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhccCCccc---eeccCccCHHHHHHHhCCC--cceE
Confidence            5899999999999997 6666665 799999988888887777766543211   1333444544455543322  6999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      .+-|.|
T Consensus       227 YfeNVG  232 (343)
T KOG1196|consen  227 YFENVG  232 (343)
T ss_pred             EEeccC
Confidence            999998

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.76  E-value=0.092  Score=44.07  Aligned_cols=35  Identities=23%  Similarity=0.401  Sum_probs=29.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~   36 (302)
                      |+.++|+|.|+ ||+|.++++.|+..|.. +++++.+
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45778999986 99999999999999975 8887765

>PLN02494 adenosylhomocysteinase

Probab=95.75  E-value=0.064  Score=50.10  Aligned_cols=40  Identities=28%  Similarity=0.531  Sum_probs=35.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      +.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       252 LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~  291 (477)
T PLN02494        252 IAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICAL  291 (477)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhH
Confidence            47999999998 59999999999999999999998876543

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.74  E-value=0.076  Score=44.23  Aligned_cols=36  Identities=25%  Similarity=0.391  Sum_probs=32.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||.++|.|| |.+|...++.|++.|++|+++.+..
T Consensus         8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            58999999998 8999999999999999999987654

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.74  E-value=0.047  Score=48.07  Aligned_cols=77  Identities=21%  Similarity=0.191  Sum_probs=54.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+|+|.|-++-+|+.++..|+++|++|++.. |+.+ .++..+    +..++..=+.+++.++..+-       +..
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~~----~ADIVIsavg~~~~v~~~~l-------k~G  223 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVCR----RADILVAAVGRPEMVKGDWI-------KPG  223 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHHh----cCCEEEEecCChhhcchhee-------cCC
Confidence            5799999999999999999999999999999984 6654 333222    23344455667766555441       455


Q ss_pred             EEEEcccCCC
Q 044670           80 IMYNNAGIVD   89 (302)
Q Consensus        80 ~lv~~Ag~~~   89 (302)
                      .+|-..|+..
T Consensus       224 avVIDvGin~  233 (296)
T PRK14188        224 ATVIDVGINR  233 (296)
T ss_pred             CEEEEcCCcc
Confidence            6666677643

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=95.73  E-value=0.047  Score=48.02  Aligned_cols=79  Identities=28%  Similarity=0.421  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +|++++|+|+++++|..++..+...|++|+.+.++.++.+.+. ..+.. ..+  +..+.+..+. +..... ...+|.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~~~-i~~~~~-~~~~d~v  212 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGAD-HVI--DYRDPDLRER-VKALTG-GRGVDVV  212 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCc-eee--ecCCccHHHH-HHHHcC-CCCcEEE
Confidence            4789999999999999999999999999999988876665543 33321 222  2222222122 222111 1258999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.|
T Consensus       213 ~~~~g  217 (323)
T cd08241         213 YDPVG  217 (323)
T ss_pred             EECcc
Confidence            99877

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=95.73  E-value=0.08  Score=46.89  Aligned_cols=79  Identities=23%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|.|+++++|..++..+...|.+|+++.+++++.+.+ +.++.. .+  .|..+....++ +.+... ..++|.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~--~~~~~~~~~~~-~~~~~~-~~~~d~v  211 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGAD-EV--IDSSPEDLAQR-VKEATG-GAGARLA  211 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCC-EE--ecccchhHHHH-HHHHhc-CCCceEE
Confidence            467999999999999999999999999999988887766555 444421 11  22333222222 222211 1258999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       212 l~~~g  216 (323)
T cd05282         212 LDAVG  216 (323)
T ss_pred             EECCC
Confidence            98877

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.72  E-value=0.057  Score=50.26  Aligned_cols=109  Identities=7%  Similarity=0.019  Sum_probs=67.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-------CC--EEEEEecCccHHHHHHHHhCCCe-----EEEEecCCCHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-------GA--KVVIADVQDNLGQALACKLGEDV-----CYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-------G~--~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~Dl~~~~~v~~~~~~   70 (302)
                      +|.|+|++|.+|.+++..|+..       |.  +++++++++++++...-++....     .+... ..+.++    +. 
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~-~~~ye~----~k-  175 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIG-IDPYEV----FQ-  175 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEe-cCCHHH----hC-
Confidence            5899999999999999999988       64  68889999887765544332111     11100 112222    22 


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc--CCCCEEEEEc
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP--QHKGCILFTA  137 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~iv~~s  137 (302)
                            ..|++|..||....   +  ..+   -.+.++.|..    +++...+.+.+  ...+.|+++|
T Consensus       176 ------daDiVVitAG~prk---p--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        176 ------DAEWALLIGAKPRG---P--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             ------cCCEEEECCCCCCC---C--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcC
Confidence                  68999999996431   1  223   4567777754    44555555544  3355666665

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.68  E-value=0.071  Score=49.43  Aligned_cols=83  Identities=16%  Similarity=0.143  Sum_probs=50.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccHHHHHHHHhCC-----CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNLGQALACKLGE-----DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |.+++|.||+|++|...+..+...|+   +|+++++++++.+...+..+.     .......|..+.+++.+.+.++.. 
T Consensus       176 g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~-  254 (410)
T cd08238         176 GGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG-  254 (410)
T ss_pred             CCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC-
Confidence            67899999999999988776666654   799999888877655443211     112122343332233333332221 


Q ss_pred             cCCccEEEEccc
Q 044670           75 YGKLDIMYNNAG   86 (302)
Q Consensus        75 ~~~id~lv~~Ag   86 (302)
                      ...+|.+|.+.|
T Consensus       255 g~g~D~vid~~g  266 (410)
T cd08238         255 GQGFDDVFVFVP  266 (410)
T ss_pred             CCCCCEEEEcCC
Confidence            125899998776

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=95.67  E-value=0.046  Score=47.98  Aligned_cols=77  Identities=19%  Similarity=0.317  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      +|++++|.|+++++|..++......|++|+.+.+++++.+.+ ..++.. .++  +..+....+    .+....  ..+|
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~~d  207 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGAD-HVI--NYRDEDFVE----RVREITGGRGVD  207 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCC-EEE--eCCchhHHH----HHHHHcCCCCee
Confidence            578999999999999999999999999999998877766555 444432 222  222222222    222222  2589


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      .++++.+
T Consensus       208 ~vl~~~~  214 (320)
T cd05286         208 VVYDGVG  214 (320)
T ss_pred             EEEECCC
Confidence            9998776

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.67  E-value=0.12  Score=46.18  Aligned_cols=110  Identities=19%  Similarity=0.276  Sum_probs=65.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +.++|.|+|| |.+|..++..++..| +.+++.+++++..+...-.+.       .... +.. -+|.++    +.    
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~-i~~-~~d~~~----l~----   72 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNIN-ILG-TNNYED----IK----   72 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeE-EEe-CCCHHH----hC----
Confidence            5678999997 999999999999999 789999998765443221111       1111 111 122221    22    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~s  137 (302)
                         .-|++|.++|....   +  ..+   -.+.+..|.    .+.+.+.+.+.+.. .+.++++|
T Consensus        73 ---~ADiVVitag~~~~---~--g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         73 ---DSDVVVITAGVQRK---E--EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             ---CCCEEEECCCCCCC---C--CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence               67999999986432   1  223   245666666    34555555554433 44566665

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=95.64  E-value=0.071  Score=47.49  Aligned_cols=109  Identities=17%  Similarity=0.217  Sum_probs=62.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHH-----HHHHHHcCC
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLV-----DTAVAKYGK   77 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~-----~~~~~~~~~   77 (302)
                      +|.|+|++|.+|.+++..|+..|.  .+++.++++..             ....|+.+...-..+.     +...+.+..
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-------------g~a~DL~~~~~~~~i~~~~~~~~~~~~~~d   67 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-------------GVAADLSHIPTAASVKGFSGEEGLENALKG   67 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-------------EEEchhhcCCcCceEEEecCCCchHHHcCC
Confidence            378999999999999999998874  68888886621             1122222211000000     001122237


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcC
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTAS  138 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS  138 (302)
                      .|++|..||....   +  ..   +-.+.+..|+.    +++...+.+.+.. .+.++++|-
T Consensus        68 aDivvitaG~~~~---~--g~---~R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsN  117 (312)
T TIGR01772        68 ADVVVIPAGVPRK---P--GM---TRDDLFNVNAG----IVKDLVAAVAESCPKAMILVITN  117 (312)
T ss_pred             CCEEEEeCCCCCC---C--Cc---cHHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecC
Confidence            8999999996431   1  22   24566777766    4444444444333 455555553

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.61  E-value=0.23  Score=46.55  Aligned_cols=75  Identities=20%  Similarity=0.343  Sum_probs=49.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +.+|+++|+|++ ++|.++++.|+++|++|++.+.....  ...+ +.....+.++..... ..    ...       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l-~~~~~gi~~~~g~~~-~~----~~~-------~~   68 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQI-GKMFDGLVFYTGRLK-DA----LDN-------GF   68 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHH-hhccCCcEEEeCCCC-HH----HHh-------CC
Confidence            468999999985 99999999999999999999875542  1222 111123444433221 11    112       67


Q ss_pred             cEEEEcccCCC
Q 044670           79 DIMYNNAGIVD   89 (302)
Q Consensus        79 d~lv~~Ag~~~   89 (302)
                      |.||...|+..
T Consensus        69 d~vv~spgi~~   79 (445)
T PRK04308         69 DILALSPGISE   79 (445)
T ss_pred             CEEEECCCCCC
Confidence            99999999753

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.61  E-value=0.13  Score=42.79  Aligned_cols=35  Identities=29%  Similarity=0.473  Sum_probs=30.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |+.++|+|.|+ ||+|..++..|++.|. ++++++.+
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45678999988 8999999999999998 69998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK14968 putative methyltransferase; Provisional

Probab=95.59  E-value=0.22  Score=40.40  Aligned_cols=74  Identities=26%  Similarity=0.315  Sum_probs=49.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCC---eEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GED---VCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~---~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++++|-.|+..|.   ++..++.++.+|+.+++++...+...+.+   +..   +.++.+|+.+.-         .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc--
Confidence            56788888877664   55556666899999999887665554333   211   778888875421         11  


Q ss_pred             CCccEEEEcccCCC
Q 044670           76 GKLDIMYNNAGIVD   89 (302)
Q Consensus        76 ~~id~lv~~Ag~~~   89 (302)
                      ..+|.++.|..+..
T Consensus        89 ~~~d~vi~n~p~~~  102 (188)
T PRK14968         89 DKFDVILFNPPYLP  102 (188)
T ss_pred             cCceEEEECCCcCC
Confidence            16899999887644

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.59  E-value=0.039  Score=48.32  Aligned_cols=36  Identities=33%  Similarity=0.519  Sum_probs=33.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      ++||+++|.|.+.-+|+.++..|..+|++|+++.+.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            579999999999999999999999999999988764

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=95.59  E-value=0.23  Score=44.18  Aligned_cols=107  Identities=15%  Similarity=0.132  Sum_probs=64.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++.|.|+ |.+|..++..|+.+|  ..|+++++++++.+.....+.      .......   .+.+.    +       .
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~~----l-------~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYAD----C-------K   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHHH----h-------C
Confidence            5889998 899999999999999  689999998876653222221      1111111   12211    2       2


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ..|++|.+++....   +  ..   ...+.+..|..-...+.+.+.++   ...+.+++++
T Consensus        67 ~aDiViita~~~~~---~--~~---~r~dl~~~n~~i~~~~~~~l~~~---~~~giiiv~t  116 (308)
T cd05292          67 GADVVVITAGANQK---P--GE---TRLDLLKRNVAIFKEIIPQILKY---APDAILLVVT  116 (308)
T ss_pred             CCCEEEEccCCCCC---C--CC---CHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEec
Confidence            68999999996432   1  12   23455666655444444444442   2346666664

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.56  E-value=0.18  Score=46.55  Aligned_cols=79  Identities=25%  Similarity=0.353  Sum_probs=48.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++++|. |+|+||..++..+...|++++++ ++++++. ++.+.++..  .  .|..+.+++.+.+.++... ..+|+
T Consensus       185 ~g~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~-~~a~~~Ga~--~--v~~~~~~~~~~~v~~~~~~-~g~Dv  257 (393)
T TIGR02819       185 PGSTVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARL-AQARSFGCE--T--VDLSKDATLPEQIEQILGE-PEVDC  257 (393)
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHH-HHHHHcCCe--E--EecCCcccHHHHHHHHcCC-CCCcE
Confidence            47899994 56999999988888899986654 4554444 444455542  2  2333222222223322211 25899


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.+.|.
T Consensus       258 vid~~G~  264 (393)
T TIGR02819       258 AVDCVGF  264 (393)
T ss_pred             EEECCCC
Confidence            9999985

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=95.54  E-value=0.032  Score=50.26  Aligned_cols=36  Identities=11%  Similarity=0.265  Sum_probs=28.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE---EEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK---VVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~---V~~~~r~~~   38 (302)
                      +++|+|.||||.+|.++++.|+++|+.   +..+.+.++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~   39 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARS   39 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEcccc
Confidence            357999999999999999999998875   355555443

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.54  E-value=0.1  Score=47.49  Aligned_cols=78  Identities=18%  Similarity=0.324  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.+ +.++.. .++  |..+. +++.+.+.++..  +.+|
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~-~~i--~~~~~~~~~~~~v~~~~~--~~~d  259 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVT-EFV--NPKDHDKPVQEVIAEMTG--GGVD  259 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEE--cccccchhHHHHHHHHhC--CCCC
Confidence            4789999985 9999998888888998 799998887776654 445532 222  33321 234444443332  2689


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       260 ~vid~~G  266 (369)
T cd08301         260 YSFECTG  266 (369)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.50  E-value=0.48  Score=40.14  Aligned_cols=119  Identities=19%  Similarity=0.205  Sum_probs=71.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +.|+++|=.|+.||   -+++-+++.|++|...+-+++..+......   +..+.+..          ..++++.+..++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----------~~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQ----------ATVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchh----------hhHHHHHhcCCC
Confidence            46889999999999   699999999999999998888766554221   22222211          224444444468


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      .|+|+++=-+-     .+.                -+-.+++.+...+++   +-++++|.+.     ....+|...-..
T Consensus       125 FDvV~cmEVlE-----Hv~----------------dp~~~~~~c~~lvkP---~G~lf~STin-----rt~ka~~~~i~~  175 (243)
T COG2227         125 FDVVTCMEVLE-----HVP----------------DPESFLRACAKLVKP---GGILFLSTIN-----RTLKAYLLAIIG  175 (243)
T ss_pred             ccEEEEhhHHH-----ccC----------------CHHHHHHHHHHHcCC---CcEEEEeccc-----cCHHHHHHHHHH
Confidence            99998854321     111                123355666666643   4578888764     233344444444


Q ss_pred             HHHH
Q 044670          158 IIAL  161 (302)
Q Consensus       158 ~~~~  161 (302)
                      .+.+
T Consensus       176 ae~v  179 (243)
T COG2227         176 AEYV  179 (243)
T ss_pred             HHHH
Confidence            4333

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.50  E-value=0.12  Score=41.09  Aligned_cols=77  Identities=23%  Similarity=0.338  Sum_probs=49.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--------------CCeEEEEecCCCHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--------------EDVCYIHCDVTSEDEITN   66 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~Dl~~~~~v~~   66 (302)
                      ++||.++|.|| |-+|...++.|++.|++|++++.  +..+++.+ ++              ....++.+ .++.+.++.
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp--~~~~~l~~-l~~i~~~~~~~~~~dl~~a~lVia-aT~d~e~N~   85 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP--EICKEMKE-LPYITWKQKTFSNDDIKDAHLIYA-ATNQHAVNM   85 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC--ccCHHHHh-ccCcEEEecccChhcCCCceEEEE-CCCCHHHHH
Confidence            58999999998 78999999999999999998853  22222222 11              11222222 456666676


Q ss_pred             HHHHHHHHcCCccEEEEccc
Q 044670           67 LVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        67 ~~~~~~~~~~~id~lv~~Ag   86 (302)
                      .+.+..+..    .++|++.
T Consensus        86 ~i~~~a~~~----~~vn~~d  101 (157)
T PRK06719         86 MVKQAAHDF----QWVNVVS  101 (157)
T ss_pred             HHHHHHHHC----CcEEECC
Confidence            666665542    3666665

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=95.49  E-value=0.095  Score=46.63  Aligned_cols=78  Identities=24%  Similarity=0.349  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|.+++|.|+++++|..++..+...|++++++.+++++.+.+ ..++.. .++  |..+.+..   .+++.+..  ..+|
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~---~~~~~~~~~~~~~d  212 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAI-ILI--RYPDEEGF---APKVKKLTGEKGVN  212 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc-EEE--ecCChhHH---HHHHHHHhCCCCce
Confidence            467899999999999999999999999988888877766665 344432 122  22332212   22222222  2589


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      .++++.|
T Consensus       213 ~~i~~~~  219 (334)
T PTZ00354        213 LVLDCVG  219 (334)
T ss_pred             EEEECCc
Confidence            9998776

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.48  E-value=0.16  Score=46.15  Aligned_cols=35  Identities=23%  Similarity=0.385  Sum_probs=29.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |++++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            46788999988 8999999999999996 57776654

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=95.48  E-value=0.13  Score=45.83  Aligned_cols=109  Identities=14%  Similarity=0.121  Sum_probs=65.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCC------CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGE------DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ..+|.|+|+ |.+|..++..|+..|.  .+++++.+++.+......+..      ...+..  -.|.+.    +.     
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~--~~dy~~----~~-----   70 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA--DKDYSV----TA-----   70 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE--CCCHHH----hC-----
Confidence            357899996 9999999999998874  689999888766544433311      112221  122221    22     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~s  137 (302)
                        ..|++|.+||....   +  ..+.   .+.+..|..=    ++.+.+.+.+. ..+.++++|
T Consensus        71 --~adivvitaG~~~k---~--g~~R---~dll~~N~~i----~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          71 --NSKVVIVTAGARQN---E--GESR---LDLVQRNVDI----FKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             --CCCEEEECCCCCCC---C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCcEEEEcc
Confidence              68999999996432   1  2333   4556666544    44444444333 356666666

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.45  E-value=1.5  Score=37.67  Aligned_cols=79  Identities=18%  Similarity=0.314  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+|||--|.||+|..+++.+-..|++++.+..+.++.+...+ .+  ++ +..|.+.++-++++.+-...  ..+|++
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake-nG--~~-h~I~y~~eD~v~~V~kiTng--KGVd~v  219 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE-NG--AE-HPIDYSTEDYVDEVKKITNG--KGVDAV  219 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh-cC--Cc-ceeeccchhHHHHHHhccCC--CCceee
Confidence            47899999999999999999999999999998776666554443 22  22 34566666654443332211  158988


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +-..|
T Consensus       220 yDsvG  224 (336)
T KOG1197|consen  220 YDSVG  224 (336)
T ss_pred             ecccc
Confidence            88777

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=95.44  E-value=0.15  Score=45.86  Aligned_cols=74  Identities=31%  Similarity=0.467  Sum_probs=50.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      |.+++|+|+++++|..++......|++|+.+.++ ++ ....+.++.. .  ..|..+.+..++    +.. .+.+|.++
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~-~~~~~~~g~~-~--~~~~~~~~~~~~----l~~-~~~vd~vi  232 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DA-IPLVKSLGAD-D--VIDYNNEDFEEE----LTE-RGKFDVIL  232 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-ch-HHHHHHhCCc-e--EEECCChhHHHH----HHh-cCCCCEEE
Confidence            8899999999999999999999999999887764 33 3344444432 1  224444333222    222 24699999


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      ++.|
T Consensus       233 ~~~g  236 (350)
T cd08248         233 DTVG  236 (350)
T ss_pred             ECCC
Confidence            9877

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02740 Alcohol dehydrogenase-like

Probab=95.41  E-value=0.1  Score=47.78  Aligned_cols=78  Identities=21%  Similarity=0.302  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|++++|.|+ |+||...+..+...|+ +|+++++++++.+.+ +.++.. .++  |..+. +++.+.+.++..  +.+|
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~-~~i--~~~~~~~~~~~~v~~~~~--~g~d  270 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGIT-DFI--NPKDSDKPVHERIREMTG--GGVD  270 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCc-EEE--ecccccchHHHHHHHHhC--CCCC
Confidence            4789999986 9999999998888998 588888887776655 445432 222  33332 123333333322  2699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       271 vvid~~G  277 (381)
T PLN02740        271 YSFECAG  277 (381)
T ss_pred             EEEECCC
Confidence            9999888

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.41  E-value=0.055  Score=42.19  Aligned_cols=37  Identities=30%  Similarity=0.497  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||+++|.|.|.-+|..++..|.++|++|..+.++.
T Consensus        26 ~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          26 LDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            5799999999999999999999999999999987544

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.40  E-value=0.092  Score=47.64  Aligned_cols=76  Identities=20%  Similarity=0.298  Sum_probs=50.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|++++|.|+ |++|...+......|++ |+.+++++++.+.+ +.++.. .++  |..+++..    +++.+..  ..+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~-~~i--~~~~~~~~----~~i~~~~~~~g~  246 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGAT-HTV--NSSGTDPV----EAIRALTGGFGA  246 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEE--cCCCcCHH----HHHHHHhCCCCC
Confidence            4789999985 99999998888889985 88888877766555 445432 222  44433322    2222222  258


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |+++.+.|
T Consensus       247 d~vid~~g  254 (358)
T TIGR03451       247 DVVIDAVG  254 (358)
T ss_pred             CEEEECCC
Confidence            99999887

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK08223 hypothetical protein; Validated

Probab=95.38  E-value=0.12  Score=45.20  Aligned_cols=35  Identities=29%  Similarity=0.380  Sum_probs=28.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      |++.+|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            35678999987 8999999999999995 57776654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.35  E-value=0.26  Score=44.31  Aligned_cols=38  Identities=32%  Similarity=0.420  Sum_probs=33.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++|+++.|.|. |.||+.+++.|...|++|++.+|+.+.
T Consensus       144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~  181 (330)
T PRK12480        144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNK  181 (330)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhH
Confidence            57899999976 889999999999999999999987653

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=95.32  E-value=0.19  Score=45.98  Aligned_cols=35  Identities=20%  Similarity=0.467  Sum_probs=29.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus        39 l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         39 LHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45778999987 8999999999999995 78887664

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=95.31  E-value=0.11  Score=47.02  Aligned_cols=79  Identities=19%  Similarity=0.270  Sum_probs=49.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|+++||+| +|++|..++..+...|+ +|+++++++++.+.+ +.++.. .++  |..+... .+..+++.+..  ..+
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~-~vi--~~~~~~~-~~~~~~i~~~~~~~~~  250 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGAD-ATI--DIDELPD-PQRRAIVRDITGGRGA  250 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCC-eEE--cCccccc-HHHHHHHHHHhCCCCC
Confidence            578999997 59999999998888999 899888877665544 445432 222  2222111 11111222222  258


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |+++++.|
T Consensus       251 d~vid~~g  258 (361)
T cd08231         251 DVVIEASG  258 (361)
T ss_pred             cEEEECCC
Confidence            99999887

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.31  E-value=0.09  Score=44.60  Aligned_cols=35  Identities=31%  Similarity=0.545  Sum_probs=31.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~   36 (302)
                      +++++++|.|| |+.|++++..|.+.|.   ++++++|+
T Consensus        23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            46889999999 9999999999999997   49999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.31  E-value=0.04  Score=43.94  Aligned_cols=41  Identities=32%  Similarity=0.443  Sum_probs=32.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      ++||+++|.|.|.-+|+.++..|.++|+.|.+.....+..+
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~   74 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQ   74 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHH
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCccc
Confidence            57999999999999999999999999999998766554333

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.29  E-value=0.11  Score=46.31  Aligned_cols=77  Identities=22%  Similarity=0.374  Sum_probs=48.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++++||+|++|..++......|++|+.+.+++++.+.+. .++.. .++  |..+.+..++ +.++... ..+|+++.
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~-~~i--~~~~~~~~~~-v~~~~~~-~~~d~vid  218 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAE-YVL--NSSDPDFLED-LKELIAK-LNATIFFD  218 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCc-EEE--ECCCccHHHH-HHHHhCC-CCCcEEEE
Confidence            44455599999999988877788999999988877665554 34432 222  3333222222 2222111 25899999


Q ss_pred             ccc
Q 044670           84 NAG   86 (302)
Q Consensus        84 ~Ag   86 (302)
                      +.|
T Consensus       219 ~~g  221 (324)
T cd08291         219 AVG  221 (324)
T ss_pred             CCC
Confidence            877

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.28  E-value=0.16  Score=46.76  Aligned_cols=46  Identities=26%  Similarity=0.383  Sum_probs=37.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      .|.+++|+|+++++|..++..+...|++++++.++.++.+.+. .++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~g  234 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-ELG  234 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcC
Confidence            3679999999999999999988899999988887766655443 354

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.25  E-value=0.26  Score=35.35  Aligned_cols=42  Identities=29%  Similarity=0.375  Sum_probs=35.6

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC---CEEEEE-ecCccHHHHHHHHhC
Q 044670            6 AIITGGASGIGAAAAKLFHENG---AKVVIA-DVQDNLGQALACKLG   48 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G---~~V~~~-~r~~~~~~~~~~~~~   48 (302)
                      +.|. |+|.+|.++++.|++.|   ++|.+. .|++++.+++.++.+
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            4445 77999999999999999   999955 999999988887764

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.22  E-value=0.1  Score=46.73  Aligned_cols=79  Identities=22%  Similarity=0.352  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+.+++|.|+++++|..++..+.+.|.+|+.+.+++++.+.+ +.++.. .+  .+..+.+..+++. +... .+.+|.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~v--~~~~~~~~~~~~~-~~~~-~~~vd~v  238 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGAD-AF--VDFKKSDDVEAVK-ELTG-GGGAHAV  238 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCc-EE--EcCCCccHHHHHH-HHhc-CCCCCEE
Confidence            468999999999999999999999999999999888776655 445422 11  2333333222222 1111 1358999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.+
T Consensus       239 l~~~~  243 (341)
T cd08297         239 VVTAV  243 (341)
T ss_pred             EEcCC
Confidence            98665

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.21  E-value=0.22  Score=44.59  Aligned_cols=86  Identities=17%  Similarity=0.108  Sum_probs=52.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----------CCeEEEEecCCCHHHHHHHH-H
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----------EDVCYIHCDVTSEDEITNLV-D   69 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~v~~~~-~   69 (302)
                      +++|+|.|.|. |-+|.++++.|.+.|++|++..|+..+........+          ....++..=+-+. ....++ +
T Consensus        15 L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVPd~-~~~~V~~~   92 (330)
T PRK05479         15 IKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLPDE-VQAEVYEE   92 (330)
T ss_pred             hCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCCHH-HHHHHHHH
Confidence            57899999986 689999999999999999887776443333222221          1112222222222 335555 5


Q ss_pred             HHHHHcCCccEEEEcccCC
Q 044670           70 TAVAKYGKLDIMYNNAGIV   88 (302)
Q Consensus        70 ~~~~~~~~id~lv~~Ag~~   88 (302)
                      ++.....+=.+|++.+|+.
T Consensus        93 ~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         93 EIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHhcCCCCCEEEECCCCC
Confidence            5554443334678888754

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.21  E-value=0.11  Score=47.47  Aligned_cols=76  Identities=22%  Similarity=0.320  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   79 (302)
                      .|++++|+|+ |+||..++..+...|+ +|+++++++++.+.+ +.++.. .+  .|..+++-    .+++.+.. +.+|
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~-~~--i~~~~~~~----~~~i~~~~~~g~d  261 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGAT-AT--VNAGDPNA----VEQVRELTGGGVD  261 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCc-eE--eCCCchhH----HHHHHHHhCCCCC
Confidence            4789999985 8999998888888999 588888877776544 445432 12  24334332    22232221 3689


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.+.|
T Consensus       262 ~vid~~G  268 (371)
T cd08281         262 YAFEMAG  268 (371)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=95.19  E-value=0.12  Score=46.67  Aligned_cols=76  Identities=24%  Similarity=0.389  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|++++|+|+ +++|..++..+...|+ +|+++++++++.+.+ ..++...   ..|..+.+-    .+++.+..  +.+
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~~----~~~l~~~~~~~~~  242 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATI---VLDPTEVDV----VAEVRKLTGGGGV  242 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE---EECCCccCH----HHHHHHHhCCCCC
Confidence            4789999985 8999999999999999 788888777766544 3444321   124444332    22333222  249


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |+++.+.|
T Consensus       243 d~vid~~g  250 (351)
T cd08233         243 DVSFDCAG  250 (351)
T ss_pred             CEEEECCC
Confidence            99999887

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.19  E-value=0.76  Score=41.19  Aligned_cols=115  Identities=19%  Similarity=0.243  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +.++|.|.|| |.+|..++..++..|. .+++.+++++.+....-.+       +....+..  .+|.++    +.    
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~~----l~----   73 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYED----IA----   73 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHHH----hC----
Confidence            4578999995 8899999999999994 8999999887543211111       11122221  123221    22    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~s  137 (302)
                         ..|++|.++|........-.+.+.   .+.+..|+    .+.+.+.+.+.+.. .+.++++|
T Consensus        74 ---~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         74 ---GSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNA----KIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             ---CCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence               689999999975421000001122   34455564    34555555554433 34566665

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=95.19  E-value=0.15  Score=46.85  Aligned_cols=46  Identities=26%  Similarity=0.396  Sum_probs=38.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      .|.+++|+|++|++|..++..+...|++++++.+++++.+.+. +++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G  238 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALG  238 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcC
Confidence            3679999999999999999888899999988888777665553 354

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PLN02602 lactate dehydrogenase

Probab=95.17  E-value=0.18  Score=45.70  Aligned_cols=108  Identities=13%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|.|+|+ |.+|.+++..|+..|.  .+++.+.+++++......+.      ....+ .. -.+.+.    ++      
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i-~~-~~dy~~----~~------  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKI-LA-STDYAV----TA------  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEE-Ee-CCCHHH----hC------
Confidence            68999996 9999999999998874  68999998876654433331      11111 11 112221    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~s  137 (302)
                       .-|++|..||....   +  ..+.   .+.+..|..    +++.+.+.+.+. ..+.++++|
T Consensus       105 -daDiVVitAG~~~k---~--g~tR---~dll~~N~~----I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        105 -GSDLCIVTAGARQI---P--GESR---LNLLQRNVA----LFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             -CCCEEEECCCCCCC---c--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence             68999999997432   2  2333   355666644    344444444333 355666666

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.14  E-value=0.23  Score=44.76  Aligned_cols=38  Identities=24%  Similarity=0.224  Sum_probs=34.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      |.||++.|.|- |.||+.+++.|...|++|++.+|+.+.
T Consensus       148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~  185 (333)
T PRK13243        148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKP  185 (333)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCCh
Confidence            57999999998 999999999999999999999887543

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.13  E-value=0.2  Score=40.69  Aligned_cols=32  Identities=25%  Similarity=0.444  Sum_probs=27.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-KVVIADVQD   37 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   37 (302)
                      +|+|.|+ ||+|.++++.|++.|. ++++++.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678885 9999999999999997 488887764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.10  E-value=0.066  Score=51.81  Aligned_cols=71  Identities=10%  Similarity=0.091  Sum_probs=53.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      .++|.|. |.+|+++++.|.++|++|++++.++++.+...+   .....+.+|.+|++..+++--      .+.|.++-+
T Consensus       419 hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~---~g~~~i~GD~~~~~~L~~a~i------~~a~~viv~  488 (558)
T PRK10669        419 HALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE---RGIRAVLGNAANEEIMQLAHL------DCARWLLLT  488 (558)
T ss_pred             CEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---CCCeEEEcCCCCHHHHHhcCc------cccCEEEEE
Confidence            3566665 789999999999999999999999988777754   356789999999887544221      156766654


Q ss_pred             c
Q 044670           85 A   85 (302)
Q Consensus        85 A   85 (302)
                      .
T Consensus       489 ~  489 (558)
T PRK10669        489 I  489 (558)
T ss_pred             c
Confidence            3

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.08  E-value=0.12  Score=45.79  Aligned_cols=99  Identities=20%  Similarity=0.238  Sum_probs=59.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCe------EEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDV------CYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~------~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|.|+|+ |+||..++..|+.++.  .+++.+..++..+.....+..-.      ..+..| .+.++    ++      
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~----~~------   68 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED----LK------   68 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh----hc------
Confidence            46889999 9999999999988773  68999988655443332221100      111222 11111    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR  123 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  123 (302)
                       .-|++|-.||....   |  ..+   -.+.+..|..=.-.+.+.+.+
T Consensus        69 -~aDiVvitAG~prK---p--Gmt---R~DLl~~Na~I~~~i~~~i~~  107 (313)
T COG0039          69 -GADIVVITAGVPRK---P--GMT---RLDLLEKNAKIVKDIAKAIAK  107 (313)
T ss_pred             -CCCEEEEeCCCCCC---C--CCC---HHHHHHhhHHHHHHHHHHHHh
Confidence             68999999997542   2  233   346677776544444444444

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.04  E-value=0.027  Score=51.57  Aligned_cols=36  Identities=14%  Similarity=0.285  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~   38 (302)
                      .++|.|.||||.+|.++++.|+++ ..++..+.++.+
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~s   74 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRK   74 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhh
Confidence            357999999999999999999998 678888776543

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.03  E-value=0.13  Score=45.23  Aligned_cols=46  Identities=30%  Similarity=0.414  Sum_probs=39.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      .|.+++|+|+++++|..++......|++|+.+.+++++.+.+.+ ++
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g  177 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRE-LG  177 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cC
Confidence            47899999999999999999999999999999887776665544 54

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.01  E-value=0.38  Score=42.93  Aligned_cols=37  Identities=16%  Similarity=0.086  Sum_probs=32.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      ++||++.|.|- |.||+.+++.|...|++|++.+|..+
T Consensus       134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            47899999875 89999999999999999999887654

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.99  E-value=0.17  Score=46.68  Aligned_cols=72  Identities=15%  Similarity=0.194  Sum_probs=51.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .|+++|+|++ .+|+.+++.+.+.|++|++++.++.......   ..  .++..|..|.+.+.+++++.     ++|.++
T Consensus        12 ~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~---ad--~~~~~~~~d~~~l~~~~~~~-----~id~vi   80 (395)
T PRK09288         12 ATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQV---AH--RSHVIDMLDGDALRAVIERE-----KPDYIV   80 (395)
T ss_pred             CCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHh---hh--heEECCCCCHHHHHHHHHHh-----CCCEEE
Confidence            4689999874 6899999999999999999987764322111   11  24667888988877766542     689887


Q ss_pred             Ecc
Q 044670           83 NNA   85 (302)
Q Consensus        83 ~~A   85 (302)
                      ...
T Consensus        81 ~~~   83 (395)
T PRK09288         81 PEI   83 (395)
T ss_pred             Eee
Confidence            643

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=94.97  E-value=0.17  Score=42.26  Aligned_cols=56  Identities=20%  Similarity=0.337  Sum_probs=40.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVT   59 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~   59 (302)
                      ++||+++|.|| |.+|..-++.|++.|++|++++.+.. ....+.+.  .++.++..+..
T Consensus         7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~--~~i~~~~~~~~   63 (205)
T TIGR01470         7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ--GGITWLARCFD   63 (205)
T ss_pred             cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc--CCEEEEeCCCC
Confidence            57999999998 78999999999999999999876544 23333322  35566555543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.95  E-value=0.12  Score=47.33  Aligned_cols=107  Identities=9%  Similarity=0.076  Sum_probs=62.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-E----EEE--E--ecCccHHHHHHHHhCC-------CeEEEEecCCCHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-K----VVI--A--DVQDNLGQALACKLGE-------DVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-~----V~~--~--~r~~~~~~~~~~~~~~-------~~~~~~~Dl~~~~~v~~~~   68 (302)
                      +|.|+|++|.+|.+++-.|+..|. .    +.+  +  ++++++++...-.+..       ++.+ ..  .+.++    +
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~--~~y~~----~  118 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GI--DPYEV----F  118 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ec--CCHHH----h
Confidence            689999999999999999998873 2    333  3  7777766554433311       1111 11  12111    2


Q ss_pred             HHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-C-CCCEEEEEc
Q 044670           69 DTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-Q-HKGCILFTA  137 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~iv~~s  137 (302)
                             ...|++|..||....   +  ..+   -.+.+..|..=    ++...+.+.+ . ..+.|+++|
T Consensus       119 -------kdaDIVVitAG~prk---p--g~t---R~dll~~N~~I----~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       119 -------EDADWALLIGAKPRG---P--GME---RADLLDINGQI----FADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             -------CCCCEEEECCCCCCC---C--CCC---HHHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEcC
Confidence                   268999999996431   2  222   35567777554    4444444443 2 355666666

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=94.90  E-value=0.03  Score=41.18  Aligned_cols=36  Identities=36%  Similarity=0.584  Sum_probs=32.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||++||.|| |.+|..-++.|++.|++|++++...
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            58999999999 9999999999999999999998875

>PRK08328 hypothetical protein; Provisional

Probab=94.87  E-value=0.12  Score=43.91  Aligned_cols=69  Identities=14%  Similarity=0.144  Sum_probs=42.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +++++|+|.|+ ||+|.++++.|+..|. ++++++.+.-....+.    -++.+..-|+.....+..+.+++.+.
T Consensus        25 L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~----Rq~l~~~~dvG~~~k~~~a~~~l~~~   94 (231)
T PRK08328         25 LKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLN----RQILHWEEDLGKNPKPLSAKWKLERF   94 (231)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhc----cccccChhhcCchHHHHHHHHHHHHh
Confidence            35778899987 7999999999999995 5778776544333222    22222234555433333444444444

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=94.87  E-value=0.12  Score=45.91  Aligned_cols=79  Identities=22%  Similarity=0.270  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|.||++.+|..++......|++|+.+.+++++.+.+ +.++.. .++  |..+.. ..+.+.++... ..+|.+
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~-~~~~~~~~~~~-~~~d~v  213 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAW-QVI--NYREEN-IVERVKEITGG-KKVRVV  213 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCC-EEE--cCCCCc-HHHHHHHHcCC-CCeEEE
Confidence            468999999999999999988889999999888877766544 445432 222  222222 22222222111 258999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +++.|
T Consensus       214 l~~~~  218 (327)
T PRK10754        214 YDSVG  218 (327)
T ss_pred             EECCc
Confidence            98766

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=94.86  E-value=0.071  Score=44.18  Aligned_cols=43  Identities=28%  Similarity=0.326  Sum_probs=33.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL   47 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~   47 (302)
                      .....||+|-||.+++++|++.|+.|++..|+. ++.....+.+
T Consensus         2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l   45 (211)
T COG2085           2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL   45 (211)
T ss_pred             cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh
Confidence            345678889999999999999999999985554 4444455544

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=94.86  E-value=2.3  Score=36.73  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=52.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEE-EecCccHHH-----------HHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-GAKVVI-ADVQDNLGQ-----------ALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-G~~V~~-~~r~~~~~~-----------~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      ++.|+|++|.+|+.+++.+.+. +..++. ++++.+...           .+.+.+. .+. +..|++.++...+.+..+
T Consensus         3 kV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~-~~D-vVid~t~p~~~~~~~~~a   80 (257)
T PRK00048          3 KVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLA-DAD-VLIDFTTPEATLENLEFA   80 (257)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhcc-CCC-EEEECCCHHHHHHHHHHH
Confidence            6899999999999999998864 677765 455443221           1111111 223 356899999888877777


Q ss_pred             HHHcCCccEEEEcccC
Q 044670           72 VAKYGKLDIMYNNAGI   87 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~   87 (302)
                      .+.  ++++++-+.|.
T Consensus        81 l~~--G~~vvigttG~   94 (257)
T PRK00048         81 LEH--GKPLVIGTTGF   94 (257)
T ss_pred             HHc--CCCEEEECCCC
Confidence            766  67888765553

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=94.85  E-value=0.15  Score=45.21  Aligned_cols=76  Identities=17%  Similarity=0.240  Sum_probs=50.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +.+++|.|+++++|..++......|++|+++.+++++.+.+ ..++.. .++  |..+.+  .+..+.+..  +.+|.++
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~--~~~~~~~~~--~~~d~vi  218 (325)
T cd05280         147 DGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGAS-EVL--DREDLL--DESKKPLLK--ARWAGAI  218 (325)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCc-EEE--cchhHH--HHHHHHhcC--CCccEEE
Confidence            46899999999999999988888999999999888776655 445432 222  222211  112222211  2589998


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      ++.|
T Consensus       219 ~~~~  222 (325)
T cd05280         219 DTVG  222 (325)
T ss_pred             ECCc
Confidence            8765

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=94.84  E-value=0.083  Score=43.13  Aligned_cols=40  Identities=20%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      +|.|.|| |.+|+.++..++..|++|++.+++++..+...+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~   40 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARK   40 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhh
Confidence            4678888 999999999999999999999999887665444

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PLN02827 Alcohol dehydrogenase-like

Probab=94.81  E-value=0.25  Score=45.26  Aligned_cols=78  Identities=18%  Similarity=0.314  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|++++|.|+ |+||..++......|+. |+++++++++.+. .+.++.. .+  .|..+. ++..+.+.++..  +.+|
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~-a~~lGa~-~~--i~~~~~~~~~~~~v~~~~~--~g~d  265 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK-AKTFGVT-DF--INPNDLSEPIQQVIKRMTG--GGAD  265 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH-HHHcCCc-EE--EcccccchHHHHHHHHHhC--CCCC
Confidence            4789999985 99999998888889985 6667766665543 3555532 22  233332 233333333322  2699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.+.|
T Consensus       266 ~vid~~G  272 (378)
T PLN02827        266 YSFECVG  272 (378)
T ss_pred             EEEECCC
Confidence            9999888

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=94.80  E-value=0.23  Score=45.35  Aligned_cols=78  Identities=19%  Similarity=0.342  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+++|.| ++++|..++..+...|. +|+.+++++++.+.+ ..++.. .++  +..+. ++....+.++..  +.+|
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~-~~i--~~~~~~~~~~~~v~~~~~--~~~d  262 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGAT-ECI--NPQDYKKPIQEVLTEMTD--GGVD  262 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc-eEe--cccccchhHHHHHHHHhC--CCCe
Confidence            478999996 59999999999999998 799998888776665 445432 222  22221 122333333322  3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      .++.+.|
T Consensus       263 ~vld~~g  269 (373)
T cd08299         263 FSFEVIG  269 (373)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=94.76  E-value=0.2  Score=44.82  Aligned_cols=75  Identities=23%  Similarity=0.400  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.| ++.+|..++..+...|++|+.+++++++.+.+ ++++.. .++  |..+.+ ..+.+.+.    +.+|.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~-~~i--~~~~~~-~~~~~~~~----~~~d~v  232 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAH-HYI--DTSKED-VAEALQEL----GGAKLI  232 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCc-EEe--cCCCcc-HHHHHHhc----CCCCEE
Confidence            478999999 89999999999889999999999887766555 455532 222  333322 22222222    368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       233 i~~~g  237 (333)
T cd08296         233 LATAP  237 (333)
T ss_pred             EECCC
Confidence            98665

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=94.76  E-value=0.15  Score=36.00  Aligned_cols=34  Identities=38%  Similarity=0.709  Sum_probs=29.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEec
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADV   35 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r   35 (302)
                      +++|+++|.|+ |..|+.++..|.+. +.+|.+.+|
T Consensus        21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            46899999999 99999999999998 567777765

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.71  E-value=0.42  Score=42.40  Aligned_cols=106  Identities=18%  Similarity=0.207  Sum_probs=63.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCC------CeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            6 AIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGE------DVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +.|.|+ |++|..++..|+..|  ..+++.+++++++......+..      .......  .+.+    .++       .
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~----~l~-------~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYA----DAA-------D   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHH----HhC-------C
Confidence            357786 789999999999999  6799999988876655544321      1111111  1211    122       6


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEc
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTA  137 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~s  137 (302)
                      -|++|.+||....   +  ..+.   .+.+..|..    +++.+.+.+.+. +.+.++++|
T Consensus        67 aDiVIitag~p~~---~--~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          67 ADIVVITAGAPRK---P--GETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCEEEEcCCCCCC---C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEcc
Confidence            8999999996432   1  2232   355555644    444444444333 356666666

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR00936 ahcY adenosylhomocysteinase

Probab=94.69  E-value=0.2  Score=46.21  Aligned_cols=40  Identities=23%  Similarity=0.331  Sum_probs=35.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      +.||+++|.|. |.||+.+++.+...|++|+++++++.+..
T Consensus       193 l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~  232 (406)
T TIGR00936       193 IAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRAL  232 (406)
T ss_pred             CCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHH
Confidence            46999999995 88999999999999999999998876543

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR02130 dapB_plant dihydrodipicolinate reductase

Probab=94.68  E-value=0.5  Score=41.12  Aligned_cols=81  Identities=12%  Similarity=0.129  Sum_probs=55.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----HHH-----------------HHHHHhCCCeEEEEecCCCHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----LGQ-----------------ALACKLGEDVCYIHCDVTSEDE   63 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~-----------------~~~~~~~~~~~~~~~Dl~~~~~   63 (302)
                      +|+|.|++|-+|++++++..+.+..++...-+..    ...                 .+...+......+..|+|.|+.
T Consensus         2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~~v~v~~~~~~~~~l~~~~~~~~d~VvIDFT~P~~   81 (275)
T TIGR02130         2 QIMVNGCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAENEAEVAGKEILLHGPSEREARIGEVFAKYPELICIDYTHPSA   81 (275)
T ss_pred             eEEEeCCCChHHHHHHHHHhcCCCEEEeeEccccccccchhhhcccceeeeccccccccHHHHHhhcCCEEEEECCChHH
Confidence            5899999999999999999998888776411111    000                 0111111113336689999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccC
Q 044670           64 ITNLVDTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        64 v~~~~~~~~~~~~~id~lv~~Ag~   87 (302)
                      +.+.++...+.  ++..|+-+.|.
T Consensus        82 ~~~n~~~~~~~--gv~~ViGTTG~  103 (275)
T TIGR02130        82 VNDNAAFYGKH--GIPFVMGTTGG  103 (275)
T ss_pred             HHHHHHHHHHC--CCCEEEcCCCC
Confidence            99988877765  67888888884

This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=94.67  E-value=0.22  Score=44.79  Aligned_cols=76  Identities=22%  Similarity=0.366  Sum_probs=49.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.|+++++|..++......|++|+.+.+++ +.+.+ +.++..  .+ .+. +.....+ .. .. .-..+|++
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~--~~-~~~-~~~~~~~-~~-~~-~~~~~d~v  247 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGAD--TV-ILR-DAPLLAD-AK-AL-GGEPVDVV  247 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCe--EE-EeC-CCccHHH-HH-hh-CCCCCcEE
Confidence            478999999999999999999999999998887654 43333 445432  22 122 2222222 11 11 11359999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       248 i~~~g  252 (350)
T cd08274         248 ADVVG  252 (350)
T ss_pred             EecCC
Confidence            98877

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=94.67  E-value=0.25  Score=44.86  Aligned_cols=74  Identities=22%  Similarity=0.303  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.| +|++|..++..+...|++|+++.+++++.....+.++... .  .|-.+.+.+.       +..+.+|++
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~-~--i~~~~~~~~~-------~~~~~~D~v  248 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADD-Y--LVSSDAAEMQ-------EAADSLDYI  248 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcE-E--ecCCChHHHH-------HhcCCCcEE
Confidence            478899995 5999999998888899999988887776666655565421 1  1223332222       112368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       249 id~~g  253 (357)
T PLN02514        249 IDTVP  253 (357)
T ss_pred             EECCC
Confidence            99877

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=94.67  E-value=0.25  Score=44.96  Aligned_cols=78  Identities=15%  Similarity=0.336  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+++|.| +|++|..++......|+ +|+.+++++++.+.+ +.++.. .++  |..+. ..+.+.+.++..  +.+|
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~-~~i--~~~~~~~~~~~~~~~~~~--~g~d  256 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGAT-DFI--NPKDSDKPVSEVIREMTG--GGVD  256 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCC-cEe--ccccccchHHHHHHHHhC--CCCC
Confidence            478999997 49999999888888998 688888877766554 445432 222  22221 122222333322  3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.+.|
T Consensus       257 ~vid~~g  263 (365)
T cd08277         257 YSFECTG  263 (365)
T ss_pred             EEEECCC
Confidence            9999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=94.64  E-value=0.14  Score=45.74  Aligned_cols=73  Identities=23%  Similarity=0.441  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+.+++|.|+++.+|..++..+...|.+|+.+.++.++.+.+. .+ .. .++     +..+   +.+.+.+ .+++|.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~-~~~-----~~~~---~~~~v~~-~~~~d~~  229 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-AD-YVI-----VGSK---FSEEVKK-IGGADIV  229 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HH-Hhc-----Cchh---HHHHHHh-cCCCcEE
Confidence            4678999999999999999999999999999988877665543 22 11 111     1111   1222222 2468999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       230 ld~~g  234 (334)
T PRK13771        230 IETVG  234 (334)
T ss_pred             EEcCC
Confidence            98876

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=94.62  E-value=0.12  Score=41.67  Aligned_cols=43  Identities=28%  Similarity=0.389  Sum_probs=33.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      ...+++||| +|-.|...++.+...|++|+..+.+....+....
T Consensus        19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~   61 (168)
T PF01262_consen   19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQLES   61 (168)
T ss_dssp             -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH
T ss_pred             CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc
Confidence            356788888 5889999999999999999999988776665543

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>cd05295 MDH_like Malate dehydrogenase-like

Probab=94.61  E-value=0.089  Score=49.05  Aligned_cols=111  Identities=7%  Similarity=0.015  Sum_probs=63.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH---cCC----EEEEEec--CccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHE---NGA----KVVIADV--QDNLGQALACKLG-------EDVCYIHCDVTSEDEITNL   67 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~---~G~----~V~~~~r--~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~   67 (302)
                      -+|+||||+|-||.++.-+++.   -|.    .+++++.  +.+.++...-++.       ..+.+. .  .+.+    .
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~--~~~e----a  196 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-T--DLDV----A  196 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-E--CCHH----H
Confidence            3699999999999999999997   342    2555666  4444443332221       112222 1  1222    2


Q ss_pred             HHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           68 VDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        68 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                      ++       ..|++|..||....   +  ..   +-.+.++.|..-.-...+.+.++-.  +..+|+.+.|
T Consensus       197 ~~-------daDvvIitag~prk---~--G~---~R~DLL~~N~~Ifk~~g~~I~~~a~--~~~~VlVv~t  250 (452)
T cd05295         197 FK-------DAHVIVLLDDFLIK---E--GE---DLEGCIRSRVAICQLYGPLIEKNAK--EDVKVIVAGR  250 (452)
T ss_pred             hC-------CCCEEEECCCCCCC---c--CC---CHHHHHHHHHHHHHHHHHHHHHhCC--CCCeEEEEeC
Confidence            33       78999999996431   1  22   3456777776554444444444321  1256666665

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.57  E-value=0.087  Score=46.01  Aligned_cols=44  Identities=25%  Similarity=0.351  Sum_probs=38.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL   47 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~   47 (302)
                      +++++|.|+ ||-+++++..|++.|. +|.++.|+.++.+.+.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            468899986 9999999999999997 5999999998888877654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	302
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		5e-54
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		1e-24
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-24
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		2e-23
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-23
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-22
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		4e-22
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		5e-22
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		5e-22
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		6e-22
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-22
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		8e-22
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		9e-21
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-20
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-20
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-20
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		1e-19
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		1e-19
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-19
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		1e-19
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		2e-19
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-19
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		5e-19
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		5e-19
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		6e-19
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		8e-19
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		2e-18
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		6e-18
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		6e-18
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		7e-18
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		1e-17
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-17
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-17
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		2e-17
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-17
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		3e-17
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-17
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		8e-17
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-16
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-16
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-16
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-16
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-16
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-16
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-16
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-16
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-16
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-16
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		3e-16
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		4e-16
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		4e-16
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		5e-16
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-16
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		8e-16
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-16
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		1e-15
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		1e-15
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-15
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-15
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		2e-15
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-15
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-15
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-15
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		4e-15
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		6e-15
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		1e-14
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		1e-14
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-14
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		2e-14
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		2e-14
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		2e-14
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-14
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-14
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		4e-14
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-14
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		5e-14
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-14
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		8e-14
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		9e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-13
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		1e-13
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		1e-13
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-13
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-13
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		4e-13
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		4e-13
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-13
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		4e-13
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		4e-13
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		6e-13
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		7e-13
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		7e-13
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-12
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		4e-12
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		5e-12
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-12
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		5e-12
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-12
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		6e-12
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-12
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		6e-12
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		6e-12
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		7e-12
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		7e-12
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		8e-12
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		8e-12
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-11
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-11
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		2e-11
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-11
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		3e-11
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		3e-11
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		3e-11
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-11
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-11
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-11
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		4e-11
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		6e-11
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		7e-11
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		1e-10
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		1e-10
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		1e-10
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		1e-10
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		1e-10
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		2e-10
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-10
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		2e-10
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-10
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-10
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-10
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		2e-10
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		4e-10
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-10
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		5e-10
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		5e-10
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-10
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-10
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		7e-10
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		8e-10
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		9e-10
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		1e-09
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-09
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-09
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-09
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-09
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		2e-09
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		2e-09
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-09
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-09
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		3e-09
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		3e-09
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		3e-09
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		3e-09
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		3e-09
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-09
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		4e-09
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		4e-09
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-09
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		4e-09
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		5e-09
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-09
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		5e-09
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-09
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		6e-09
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		6e-09
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		7e-09
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		8e-09
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-08
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		3e-08
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-08
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		4e-08
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		5e-08
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-08
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		5e-08
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		6e-08
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		6e-08
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		7e-08
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		7e-08
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		8e-08
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		8e-08
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		8e-08
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		8e-08
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		9e-08
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		2e-07
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		2e-07
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		2e-07
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		2e-07
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		4e-07
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		4e-07
3h7a_A	252	Crystal Structure Of Short-Chain Dehydrogenase From		4e-07
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		5e-07
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		5e-07
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		6e-07
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		6e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		8e-07
1ulu_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		1e-06
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		1e-06
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-06
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		2e-06
3pjf_A	270	Structure Of Enr G93v Mutant-Nad+-Triclosan Complex		2e-06
1dfg_A	261	X-Ray Structure Of Escherichia Coli Enoyl Reductase		2e-06
1c14_A	262	Crystal Structure Of E Coli Enoyl Reductase-nad+-tr		2e-06
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		3e-06
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		3e-06
1qsg_A	265	Crystal Structure Of Enoyl Reductase Inhibition By		3e-06
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-06
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-06
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-06
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		4e-06
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		4e-06
3pjd_A	270	Structure Of Enr G93a Mutant-Nad+-Triclosan Complex		5e-06
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		5e-06
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		5e-06
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		6e-06
3pje_A	270	Structure Of Enr G93s Mutant-Nad+-Triclosan Complex		6e-06
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-05
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		1e-05
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-05
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		1e-05
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-05
4ali_A	282	Crystal Structure Of S. Aureus Fabi In Complex With		2e-05
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		2e-05
4all_A	277	Crystal Structure Of S. Aureus Fabi In Complex With		2e-05
4fs3_A	256	Crystal Structure Of Staphylococcus Aureus Enoyl-Ac		2e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		2e-05
3gnt_A	256	Crystal Structure Of The Staphylococcus Aureus Enoy		2e-05
3gns_A	260	Crystal Structure Of The Staphylococcus Aureus Enoy		2e-05
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		2e-05
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-05
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-05
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-05
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		7e-05
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		8e-05
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		8e-05
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		9e-05
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		1e-04
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		1e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		2e-04
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		2e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		3e-04
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		4e-04
3i1j_A	247	Structure Of A Putative Short Chain Dehydrogenase F		5e-04
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		6e-04
3k2e_A	296	Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) R		6e-04
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		7e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  207 bits (528), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 108/236 (45%), Positives = 154/236 (65%), Gaps = 4/236 (1%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDVTSEDEITNLVDTAVAKYGKL 78
           KLF   GAKVVIAD+ D+ GQ +   +G    + ++HCDVT ++++ NLVDT +AK+GKL
Sbjct: 34  KLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93
Query: 79  DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS 138
           DIM+ N G++     S+L+    D  RV+ +N  G FL AKHAARVMIP  KG I+FTAS
Sbjct: 94  DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTAS 153
Query: 139 ACTEIAGIG-SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG-ISSRNSINP 196
             +  AG G S  YT +K+ ++ L   L  EL +YG+RVNCVSPY + S  ++    ++ 
Sbjct: 154 ISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS 213
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSL 252
           + +E    +  NL+G +L AE +A+A  YLA DE+  V+GLNLV+DGG++  NP+ 
Sbjct: 214 SRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAF 269

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 113/205 (55%), Gaps = 11/205 (5%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           K+G        DV+ E +I  +VD  VA +G +D +  NAG+V    AS++DT   D DR
Sbjct: 72  KIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH--LASLIDTTVEDFDR 129
Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           V+A+N  G +L  KHAA  MI +  G I+  +S   ++A  G+ AY +SK GII L +I 
Sbjct: 130 VIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRIT 189
Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL------SEMGNLRGQVLNAEGI 219
           AAELR  G+R N + P   V     + ++  A+ +  L      S +  L+G++   E +
Sbjct: 190 AAELRSSGIRSNTLLPA-FVDTPMQQTAM--AMFDGALGAGGARSMIARLQGRMAAPEEM 246
Query: 220 ANAALYLATDEASDVTGLNLVVDGG 244
           A   ++L +D+AS +TG   + DGG
Sbjct: 247 AGIVVFLLSDDASMITGTTQIADGG 271

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 125/246 (50%), Gaps = 16/246 (6%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +LF +NGA VV+ADV ++    +A ++G     +  DV+S  +  + V+   AK+G++D+
Sbjct: 45  ELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESXVEKTTAKWGRVDV 104
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAG    G  +V+  P+   DR+ +VN  G FL +K+   V      G I+ T S  
Sbjct: 105 LVNNAGFGTTG--NVVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYT 162
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR---NSINPA 197
              A     AY  SK  I +L +  A +  + G+RVN V+P  + S   ++    + +PA
Sbjct: 163 ATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPA 222
Query: 198 ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSLMKFAS 257
            L +  +    +  +   AE IA A L+LA+D +   TG  L VDGG S+ N        
Sbjct: 223 KLRSDFNARA-VXDRXGTAEEIAEAXLFLASDRSRFATGSILTVDGGSSIGN-------- 273
Query: 258 PFHLIK 263
             HL+K
Sbjct: 274 --HLVK 277

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 120/230 (52%), Gaps = 4/230 (1%)
Query: 21  KLFHENGAKVVIADV-QDNLGQALA--CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           K F  N + VV  ++ +D L Q +     +G++V  +  DV+ + ++   V      Y +
Sbjct: 25  KKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR 84
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
           +D++ NNAGI+D G   V +      +RVLAVN    F  ++    +M+ Q KG I+ TA
Sbjct: 85  IDVLCNNAGIMD-GVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTA 143
Query: 138 SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
           S      G     YTV+K+G+I L + +AA     G+R   V P  + + I   +S    
Sbjct: 144 SIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSE 203
Query: 198 ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +    L+++ +L  ++   E IAN  ++LA+DEAS V G  +VVDGG +V
Sbjct: 204 LGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNGDAVVVDGGLTV 253

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  104 bits (259), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 11/219 (5%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GAKVV  D+ D  G+A+A +L +   Y+H DVT   +    VDTAV  +G L ++ NNA
Sbjct: 30  EGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA 89
Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
           GI++ G  ++ D   ++  R+L VN TG FLG +   + M    +G I+  +S       
Sbjct: 90  GILNIG--TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT 147
Query: 146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE 205
           +    YT +K+ +  L K  A EL   G+RVN + P GLV      + +   I +  L  
Sbjct: 148 VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHP-GLVK-TPMTDWVPEDIFQTAL-- 203
Query: 206 MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
                G+      ++N  +YLA+DE+S  TG   VVDGG
Sbjct: 204 -----GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALA--CKLGEDVCYIHC 56
           LEGKV                 F    AKVV+     +D     L    K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+ +    S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 117 GAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +    KG ++  +S   +I       Y  SK G+  + K LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 176 VNCVSPYGLVSGISSRNSINP---AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           VN + P  + + I++    +P   A +E+ +       G +   E IA  A +LA+ EAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIP-----MGYIGEPEEIAAVAAWLASSEAS 237
Query: 233 DVTGLNLVVDGGFSV 247
            VTG+ L  DGG ++
Sbjct: 238 YVTGITLFADGGMTL 252

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  101 bits (252), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/219 (34%), Positives = 111/219 (50%), Gaps = 11/219 (5%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GAKVV  D+ D  G+A A +L +   Y+H DVT   +    VDTAV  +G L ++ NNA
Sbjct: 30  EGAKVVFGDILDEEGKAXAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNA 89
Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
           GI++ G  ++ D   ++  R+L VN TG FLG +   +      +G I+  +S       
Sbjct: 90  GILNIG--TIEDYALTEWQRILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGLAGT 147
Query: 146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE 205
           +    YT +K+ +  L K  A EL   G+RVN + P GLV      + +   I +  L  
Sbjct: 148 VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHP-GLVK-TPXTDWVPEDIFQTAL-- 203
Query: 206 MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
                G+      ++N  +YLA+DE+S  TG   VVDGG
Sbjct: 204 -----GRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 105/207 (50%), Gaps = 25/207 (12%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDVTSE+ +   VD+ V  +GK+D ++NNAG     FA V D P  D  RVL +N TG F
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGAF 121
Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSP----AYTVSKYGIIALVKILAAELRQ 171
              K  +R MI Q+ G I+ TAS    +AG+  P    AY  SK  IIAL +  A +L  
Sbjct: 122 HVLKAVSRQMITQNYGRIVNTAS----MAGVKGPPNMAAYGTSKGAIIALTETAALDLAP 177
Query: 172 YGLRVNCVSPYGLVSGI-------------SSRNSINPAIL-EAFLSEMGNLRGQVLNAE 217
           Y +RVN +SP  +  G              S   S +P ++ +  +  +   R   +N  
Sbjct: 178 YNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINE- 236
Query: 218 GIANAALYLATDEASDVTGLNLVVDGG 244
            I     +L  D++S +TG+NL + GG
Sbjct: 237 -IPGVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALA--CKLGEDVCYIHC 56
           LEGKV                 F    AKVV+     +D     L    K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+ +    S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLANP--VSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 117 GAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +    KG ++  +S   +I       Y  SK G+  + + LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 176 VNCVSPYGLVSGISSRNSINP---AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           VN + P  + + I++    +P   A +E+ +       G +   E IA  A +LA+ EAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIP-----MGYIGEPEEIAAVAAWLASSEAS 237
Query: 233 DVTGLNLVVDGGFS 246
            VTG+ L  DGG +
Sbjct: 238 YVTGITLFADGGMT 251

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  101 bits (251), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALA--CKLGEDVCYIHC 56
           LEGKV                 F    AKVV+     +D     L    K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+ +    S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 117 GAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +    KG ++  +S   +I       Y  SK G+  + + LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 176 VNCVSPYGLVSGISSRNSINP---AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           VN + P  + + I++    +P   A +E+ +       G +   E IA  A +LA+ EAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIP-----MGYIGEPEEIAAVAAWLASSEAS 237
Query: 233 DVTGLNLVVDGGFSV 247
            VTG+ L  DGG ++
Sbjct: 238 YVTGITLFADGGMTL 252

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  100 bits (250), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 13/230 (5%)
Query: 23  FHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           + E GA+V +A    +  Q +A ++   G     I CDVT  D++  ++D    + G +D
Sbjct: 52  YAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTAS 138
           I   NAGIV     ++LD P  +  R+   N TG FL A+ AAR M+ Q   G I+ TAS
Sbjct: 112 IAVCNAGIVS--VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTAS 169
Query: 139 ACTEIAGIGSPA--YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
               I  I      Y  SK  ++ L K +A EL  + +RVN VSP     G      + P
Sbjct: 170 MSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP-----GYIRTELVEP 224
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
                 L E     G++   E +    LYLA+  +S +TG ++V+DGG++
Sbjct: 225 LADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTGSDIVIDGGYT 274

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  100 bits (250), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 123/254 (48%), Gaps = 15/254 (5%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALA--CKLGEDVCYIHC 56
           LEGKV                 F    AKVV+     +D     L    K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+ +    S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 117 GAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +    KG ++  +S   +I       Y  SK G+  + + LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 176 VNCVSPYGLVSGISSRNSINP---AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           VN + P  + + I++    +P   A +E+ +       G +   E IA  A +LA+ EAS
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIP-----MGYIGEPEEIAAVAAWLASSEAS 237
Query: 233 DVTGLNLVVDGGFS 246
            VTG+ L  DGG +
Sbjct: 238 YVTGITLFADGGMT 251

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 99/202 (49%), Gaps = 10/202 (4%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           KLG D   +  DV + +++TN+V   V  +G++DI+ NNAG+       ++   + + D 
Sbjct: 51  KLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL--LMRMKEEEWDT 108
Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           V+  N  G FL  K  +R M+ Q  G I+  AS        G   Y  +K G+I L K  
Sbjct: 109 VINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTS 168
Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAA 223
           A EL    + VN ++P G ++       +   + E   +EM  L    Q   A+ IANA 
Sbjct: 169 AKELASRNITVNAIAP-GFIA-----TDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV 222
Query: 224 LYLATDEASDVTGLNLVVDGGF 245
            + A+D++  +TG  L VDGG 
Sbjct: 223 TFFASDQSKYITGQTLNVDGGM 244

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 11/230 (4%)
Query: 23  FHENGAKVVIADVQDNLGQALACK-----LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           F +  AKVVI +  +N  +AL  K      G     +  DVT E+++ NLV TA+ ++G 
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFT 136
           LD+M NNAG+ +   +  L     + ++V+  N TG FLG++ A +  +    KG ++  
Sbjct: 94  LDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINM 151
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
           +S    I       Y  SK G+  + + LA E    G+RVN + P  + + I++    +P
Sbjct: 152 SSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADP 211
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
            +  A +  M  + G +   E +A  A +LA+ +AS VTG+ L  DGG +
Sbjct: 212 -VQRADVESMIPM-GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 11/230 (4%)
Query: 23  FHENGAKVVIADVQDNLGQALACK-----LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           F +  AKVVI +  +N  +AL  K      G     +  DVT E+++ NLV TA+ ++G 
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFT 136
           LD+M NNAG+ +   +  L     + ++V+  N TG FLG++ A +  +    KG ++  
Sbjct: 94  LDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINM 151
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
           +S    I       Y  SK G+  + + LA E    G+RVN + P  + + I++    +P
Sbjct: 152 SSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADP 211
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
            +  A +  M  + G +   E +A  A +LA+ +AS VTG+ L  DGG +
Sbjct: 212 -VQRADVESMIPM-GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 118/230 (51%), Gaps = 11/230 (4%)
Query: 23  FHENGAKVVIADVQDNLGQALACK-----LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           F +  AKVVI +  +N  +AL  K      G     +  DVT E+++ NLV TA+ ++G 
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFT 136
           LD+M NNAG+ +   +  L     + ++V+  N TG FLG++ A +  +    KG ++  
Sbjct: 94  LDVMINNAGVENPVPSHELSL--DNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINM 151
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
           +S    I       Y  SK G+  + + LA E    G+RVN + P  + + I++    +P
Sbjct: 152 SSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADP 211
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
            +  A +  M  + G +   E +A  A +LA+ +AS VTG+ L  DGG +
Sbjct: 212 -VQRADVESMIPM-GYIGKPEEVAAVAAFLASSQASYVTGITLFADGGMT 259

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 49  EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL-DTPKSDLDRVL 107
           + V  +  DV  E ++   +   + ++G +D++ NNAGI     A VL  TP    D+V+
Sbjct: 52  DKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVM 111
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
           AVN  G FLG +     M+ Q  G I+  AS  + +A  G  AYT SK  ++ L K +A 
Sbjct: 112 AVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAV 171
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           +    G+R N V P  + + ++      P + +  L+ +   + ++  A  +A+A ++LA
Sbjct: 172 DYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP--QKEIGTAAQVADAVMFLA 229
Query: 228 TDEASDVTGLNLVVDGGFS 246
            ++A+ V G  LV+DG ++
Sbjct: 230 GEDATYVNGAALVMDGAYT 248

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD 102
           LA + G  V Y   D++  + +  LVD AV + G++DI+ NNAGI  +  A + D P   
Sbjct: 49  LAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEK 106
Query: 103 LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
            D +LA+N +  F G   A   M  Q  G I+  ASA   +A     AY  +K+G++   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 163 KILAAELRQYGLRVNCVSPYGL--------VSGISSRNSINPAILEAFLSEMGNLRGQVL 214
           K+ A E    G+  N + P  +        +S ++ +N ++       L        Q +
Sbjct: 167 KVTALETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226
Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
             E +   A++LA+D A+ +TG  + VDGG++
Sbjct: 227 TPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD 102
           LA + G  V Y   D++  + +  LVD AV + G++DI+ NNAGI  +  A + D P   
Sbjct: 49  LAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEK 106
Query: 103 LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
            D +LA+N +  F G   A   M  Q  G I+  ASA   +A     AY  +K+G++   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 163 KILAAELRQYGLRVNCVSPYGL--------VSGISSRNSINPAILEAFLSEMGNLRGQVL 214
           K+ A E    G+  N + P  +        +S ++ +N ++       L        Q +
Sbjct: 167 KVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226
Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
             E +   A++LA+D A+ +TG  + VDGG++
Sbjct: 227 TPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 103/212 (48%), Gaps = 10/212 (4%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD 102
           LA + G  V Y   D++  + +  LVD AV + G++DI+ NNAGI  +  A + D P   
Sbjct: 49  LAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEK 106
Query: 103 LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
            D +LA+N +  F G   A   M  Q  G I+  ASA   +A     AY  +K+G++   
Sbjct: 107 WDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFT 166
Query: 163 KILAAELRQYGLRVNCVSPYGL--------VSGISSRNSINPAILEAFLSEMGNLRGQVL 214
           K+ A E    G+  N + P  +        +S ++ +N ++       L        Q +
Sbjct: 167 KVTALETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFV 226
Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
             E +   A++LA+D A+ +TG  + VDGG++
Sbjct: 227 TPEQLGGTAVFLASDAAAQITGTTVSVDGGWT 258

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 112/222 (50%), Gaps = 9/222 (4%)
Query: 29  KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV 88
           +VV+ADV D  G A A +LG+   Y H DVT E++   +V  A  ++G +D + NNAGI 
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS 90
Query: 89  DRGFASVLDTPKSD-LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG 147
              F   L+T   +   +V+ +N TG F+G K     M     G I+  +SA   +    
Sbjct: 91  TGMF---LETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL 147
Query: 148 SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG 207
           + +Y  SK+G+  L K+ A EL    +RVN V P    + +++   I         + M 
Sbjct: 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM- 206
Query: 208 NLRGQVLNAEG-IANAALYLATDEASDVTGLNLVVDGGFSVA 248
              G+V N  G IA A + L +D +S VTG  L VDGG++  
Sbjct: 207 ---GRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG 245

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 115/256 (44%), Gaps = 15/256 (5%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC---- 56
           LEGK+                LF   GAKVV+     N   ALA +L +++         
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGN---ALA-ELTDEIAGGGGEAAA 61
Query: 57  ---DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
              DV  E     LV+ AV ++G LD  +NNAG +      +           L  N T 
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALG-AMGEISSLSVEGWRETLDTNLTS 120
Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQY 172
            FL AK+    +     G + FT+S     AG  G   Y  SK G+I LV+ LA EL   
Sbjct: 121 AFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180
Query: 173 GLRVNCVSPYGLVSGISSRNSINPAI-LEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           G+RVN + P G  +  +  N    A     F+  +  L+ ++   E IA AALYLA+D A
Sbjct: 181 GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALK-RIARPEEIAEAALYLASDGA 239
Query: 232 SDVTGLNLVVDGGFSV 247
           S VTG  L+ DGG SV
Sbjct: 240 SFVTGAALLADGGASV 255

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 116/233 (49%), Gaps = 21/233 (9%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F   GAKV+  D+ ++  Q L    G     +  DVT + +I    D    +  +LD+++
Sbjct: 26  FAREGAKVIATDINESKLQELEKYPGIQTRVL--DVTKKKQI----DQFANEVERLDVLF 79
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           N AG V  G  +VLD  + D D  + +N    +L  K     M+ Q  G I+  +S  + 
Sbjct: 80  NVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137
Query: 143 IAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPA 197
           + G+     Y+ +K  +I L K +AA+  Q G+R NCV P G V   S +  I    NP 
Sbjct: 138 VKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP-GTVDTPSLQERIQARGNPE 196
Query: 198 ILEA---FLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             EA   FL       G+   AE IA   +YLA+DE++ VTG  +++DGG+S+
Sbjct: 197 --EARNDFLKRQKT--GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGGWSL 245

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 91.3 bits (225), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 8/221 (3%)
Query: 29  KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV 88
           +VV+ADV D  G A A +LG+   Y H DVT E++   +V  A  ++G +D + NNAGI 
Sbjct: 31  RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGIS 90
Query: 89  DRGFASVLDTPKSD-LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG 147
              F   L+T   +   +V+ +N TG F+G K     M     G I+  +SA   +    
Sbjct: 91  TGMF---LETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLAL 147
Query: 148 SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG 207
           + +Y  SK+G+  L K+ A EL    +RVN V P    + +++   I         + M 
Sbjct: 148 TSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPM- 206
Query: 208 NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
              G+V     IA A + L +D +S VTG  L VDGG++  
Sbjct: 207 ---GRVGEPGEIAGAVVKLLSDTSSYVTGAELAVDGGWTTG 244

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 91.3 bits (225), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 8/246 (3%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKV               KL    GAKV  +D+ +  GQ LA +LGE   ++  DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPK-SDLDRVLAVNTTGGFLGAK 119
           E + T ++     + G L+++ NNAGI+  G    ++T +  D  R+L +NT   F+G +
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPGD---METGRLEDFSRLLKINTESVFIGCQ 120
Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ--YGLRVN 177
                M  +  G I+  AS  + +       Y+ SK  + AL +  A   R+  Y +RVN
Sbjct: 121 QGIAAM-KETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVN 179
Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMG-NLRGQVLNAEGIANAALYLATDEASDVTG 236
            + P G+ + +   +       E  L +   N  G+    E IA   L+LA+DE+S ++G
Sbjct: 180 SIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSG 239
Query: 237 LNLVVD 242
             L  D
Sbjct: 240 SELHAD 245

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 90.9 bits (224), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 112/228 (49%), Gaps = 8/228 (3%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           + FH  GA V +   +++  + +A  LG+DV     +++    I  L + A  +   +DI
Sbjct: 45  RCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104
Query: 81  MYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           + NNAGI   G F  + D    D D VLAVN T      +     M+ +  G I+   S 
Sbjct: 105 LVNNAGITRDGLFVRMQD---QDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSI 161
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
              +   G   Y  +K G+I   K LA E+    + VNC++P  + S ++ +  +N    
Sbjct: 162 VGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK--LNEKQK 219
Query: 200 EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           EA ++ +   R  +   E IA A +YLA+DEA+ +TG  L ++GG ++
Sbjct: 220 EAIMAMIPMKRMGI--GEEIAFATVYLASDEAAYLTGQTLHINGGMAM 265

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 9/227 (3%)
Query: 25  ENGAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           E G  VV+A    +      Q L  K G +     CDV++ +E+  L++    K+GKLD 
Sbjct: 43  EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDT 102
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS-A 139
           + N AGI  R  A   + P  +  +V+ VN  G +   + A  ++       I+   S  
Sbjct: 103 VVNAAGINRRHPAE--EFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLT 160
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
             E+      AY  SK G+ +L K LA E  +YG+RVN ++P    + ++     +P  L
Sbjct: 161 VEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKL 220
Query: 200 EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
           +  L  +   R  V   E +   A++LA++EA  VTG  + VDGG++
Sbjct: 221 DYMLKRIPLGRTGV--PEDLKGVAVFLASEEAKYVTGQIIFVDGGWT 265

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 112/227 (49%), Gaps = 9/227 (3%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +LF + GA++V  D+++   +  A  +G     +  DV     +      A+A  G+LD 
Sbjct: 23  ELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVXDVADPASVERGFAEALAHLGRLDG 80
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + + AGI    F      P  D + VL VN TG FL AK A+     ++ G I+ TAS  
Sbjct: 81  VVHYAGITRDNFH--WKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRV 138
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
             +  +G   Y  S  G++ L + LA EL ++G+RVN ++P G +    +         +
Sbjct: 139 Y-LGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAP-GFIETRXTAKVPEKVREK 196
Query: 201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           A  +      G+ L    +A AAL+L +DE+S +TG  L VDGG ++
Sbjct: 197 AIAATPLGRAGKPLE---VAYAALFLLSDESSFITGQVLFVDGGRTI 240

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV+ E E+  L    + ++G+LD++ NNAGI       +L   + D   VL +N  G 
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL--LLRMKRDDWQSVLDLNLGGV 141
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           FL ++ AA++M+ Q  G I+  AS   E+   G   Y+ +K G+I L K +A EL   G+
Sbjct: 142 FLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201
Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD- 233
            VN V+P  + + ++S  +    +    L   G        A  +A    +LA D A+  
Sbjct: 202 TVNAVAPGFIATDMTSELAAEKLLEVIPLGRYG-------EAAEVAGVVRFLAADPAAAY 254
Query: 234 VTGLNLVVDGGFSVA 248
           +TG  + +DGG  +A
Sbjct: 255 ITGQVINIDGGLVMA 269

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 109/220 (49%), Gaps = 17/220 (7%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
           + A  V+ ++Q   GQA AC+         CD+TSE E++ L D A++K GK+DI+ NNA
Sbjct: 46  DAANHVVDEIQQLGGQAFACR---------CDITSEQELSALADFAISKLGKVDILVNNA 96
Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
           G    G     D P +D  R   +N    F  ++  A  M     G IL   S   E   
Sbjct: 97  G---GGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN 153
Query: 146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE 205
           I   +Y  SK     LV+ +A +L +  +RVN ++P  +++  + ++ I P I +  L  
Sbjct: 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTD-ALKSVITPEIEQKMLQH 212
Query: 206 MGNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
               R GQ    + IANAAL+L +  AS V+G  L V GG
Sbjct: 213 TPIRRLGQ---PQDIANAALFLCSPAASWVSGQILTVSGG 249

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 8/199 (4%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G D   I  +V   DE+  ++   V+++G LD++ NNAGI       ++   + + D V+
Sbjct: 59  GVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVI 116
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
             N  G F   + A   M+ Q  G I+  +S    +   G   Y  +K G+I L K  A 
Sbjct: 117 DTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR 176
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYL 226
           EL   G+ VN V+P  +VS ++  ++++  + E  L+++   R GQ  +   IAN   +L
Sbjct: 177 ELASRGITVNAVAPGFIVSDMT--DALSDELKEQMLTQIPLARFGQDTD---IANTVAFL 231
Query: 227 ATDEASDVTGLNLVVDGGF 245
           A+D+A  +TG  + V+GG 
Sbjct: 232 ASDKAKYITGQTIHVNGGM 250

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 117/234 (50%), Gaps = 20/234 (8%)
Query: 25  ENGAKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           E GA+V+IAD    L +A+A K        G DV  +  DVT+ + + N V +   + G+
Sbjct: 35  EAGARVIIAD----LDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
           +DI+   AGI      +   T    L +V  +N  G F   +   R+M+ Q +G I+   
Sbjct: 91  VDILVACAGICISEVKAEDMTDGQWLKQV-DINLNGMFRSCQAVGRIMLEQKQGVIVAIG 149
Query: 138 SACTEIAGIGSP----AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS 193
           S    I  +  P    AY  SK G+   ++ LAAE   +G+R N V+P  + + ++    
Sbjct: 150 SMSGLI--VNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGM 207
Query: 194 INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             P + +A+++  G   G+V   + +A+   +LA+D AS +TG  + VD GF+V
Sbjct: 208 EKPELYDAWIA--GTPMGRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGFTV 259

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +  H  GA V +   ++   + LA +LGE +     +++  + +  L   A  + G +DI
Sbjct: 28  RALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEMGGVDI 87
Query: 81  MYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           + NNAGI   G F  + D    D D VL VN T  F   +     M+ +  G I+   S 
Sbjct: 88  LVNNAGITRDGLFVRMSD---EDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSI 144
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
                  G   Y  SK G+I   K LA E+    + VNC++P  + S ++ +  +N    
Sbjct: 145 VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGK--LNEKQK 202
Query: 200 EAFLSEMGNLRGQVLN-AEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +A    MGN+  + +     IA A +YLA+DEA+ VTG  L V+GG ++
Sbjct: 203 DAI---MGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMAM 248

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 110/229 (48%), Gaps = 10/229 (4%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +  H  GA V +   ++   + LA +LGE +     +++  + +  L   A  + G +DI
Sbjct: 25  RALHAQGAIVGLHGTREEKLKELAAELGERIFVFPANLSDREAVKALGQKAEEEMGGVDI 84
Query: 81  MYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           + NNAGI   G F  + D    D D VL VN T  F   +     M+ +  G I+   S 
Sbjct: 85  LVNNAGITRDGLFVRMSD---EDWDAVLTVNLTSVFNLTRELTHPMMRRRNGRIINITSI 141
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
                  G   Y  SK G+I   K LA E+    + VNC++P  + S ++ +  +N    
Sbjct: 142 VGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVNCIAPGFIESAMTGK--LNEKQK 199
Query: 200 EAFLSEMGNLRGQVLN-AEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +A    MGN+  + +     IA A +YLA+DEA+ VTG  L V+GG ++
Sbjct: 200 DAI---MGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTLHVNGGMAM 245

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 20/233 (8%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           + F  +GA+VVI D  ++ G+AL  +L   V +I CDVT ED++  LV   + ++G+LD 
Sbjct: 27  RAFVNSGARVVICDKDESGGRALEQELPGAV-FILCDVTQEDDVKTLVSETIRRFGRLDC 85
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAG          +T      ++L +N  G +   K A   +  + +G ++  +S  
Sbjct: 86  VVNNAGH-HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINISSLV 143
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGI---------SSR 191
             I    +  Y  +K  + A+ K LA +   YG+RVNC+SP  + + +           R
Sbjct: 144 GAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPR 203
Query: 192 NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            SI   +L   L  MG        AE +  AA++LA+ EA+  TG+ L+V GG
Sbjct: 204 ASIREGMLAQPLGRMGQ------PAE-VGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 18/235 (7%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F + G+KV+   + D  G+A          +I CDVT+ D++   +D    +YG + ++ 
Sbjct: 28  FVDEGSKVIDLSIHDP-GEA-------KYDHIECDVTNPDQVKASIDHIFKEYGSISVLV 79
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           NNAGI    +  +      +  R++ VN  G +  +K A   MI      I+  +S    
Sbjct: 80  NNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS 137
Query: 143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPA 197
           I    + AY  SK+ +I L K +A +     LR N V P  + + +  + +      +P 
Sbjct: 138 IITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPM 196
Query: 198 ILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANP 250
            +E  +SE G+     ++   + +A+A  +LA+ EAS +TG  L VDGG S+  P
Sbjct: 197 RIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSIRAP 251

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNAGI       ++   + +   ++  N T  F  +K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   Y  +K G+I   K +A E+   G+ VN V+
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 188 PGAIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 241 VDGGF 245
           V+GG 
Sbjct: 244 VNGGM 248

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 84.3 bits (207), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
           V +   D T   EI +       ++G  DI+ NNAG+  +    + D P    DR++AVN
Sbjct: 78  VLHHPADXTKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVN 135
Query: 111 TTGGFLGAKHAARVMIPQHK----GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILA 166
            +  F    H  R  IP  K    G I+  ASA   +A     AY  +K+GI  L K +A
Sbjct: 136 LSSSF----HTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVA 191
Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM----GNLRGQ----VLNAEG 218
            E+ + G+ VN + P  +++ +  +   + A       E       L+GQ     +  E 
Sbjct: 192 LEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVEQ 251
Query: 219 IANAALYLATDEASDVTGLNLVVDGGFS 246
           +A+ ALYLA D+A+ +TG ++  DGG++
Sbjct: 252 VASLALYLAGDDAAQITGTHVSXDGGWT 279

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 18/232 (7%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F + G+KV+   + D  G+A          +I CDVT+ D++   +D    +YG + ++ 
Sbjct: 35  FVDEGSKVIDLSIHDP-GEA-------KYDHIECDVTNPDQVKASIDHIFKEYGSISVLV 86
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           NNAGI    +  +      +  R++ VN  G +  +K A   MI      I+  +S    
Sbjct: 87  NNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQAS 144
Query: 143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPA 197
           I    + AY  SK+ +I L K +A +     LR N V P  + + +  + +      +P 
Sbjct: 145 IITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPM 203
Query: 198 ILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +E  +SE G+     ++   + +A+A  +LA+ EAS +TG  L VDGG S+
Sbjct: 204 RIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREASFITGTCLYVDGGLSI 255

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNAGI       ++   + +   ++  N T  F  +K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   Y  +K G+I   K +A E+   G+ VN V+
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 188 PGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 241 VDGGF 245
           V+GG 
Sbjct: 244 VNGGM 248

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 113/245 (46%), Gaps = 37/245 (15%)
Query: 23  FHENGAKVVIADVQDNLGQALA-------------CKLGEDVCYIHCDVTSEDEITNLVD 69
           F   GA+VV+ D+   L  + A                G +      +V   D+   L+ 
Sbjct: 47  FAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106
Query: 70  TAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ 128
           TAV  +G LD++ NNAGIV DR    + +T + + D V+AV+  G F   +HAA      
Sbjct: 107 TAVETFGGLDVLVNNAGIVRDR---MIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGL 163
Query: 129 HK------GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
            K      G I+ T+S       +G   Y+ +K GI  L  + AAE+ +YG+ VN ++P 
Sbjct: 164 SKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP- 222
Query: 183 GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNA---EGIANAALYLATDEASDVTGLNL 239
                 S+R  +     E   +EM   + Q  +A   E ++   ++L + EA DVTG   
Sbjct: 223 ------SARTRMT----ETVFAEMMATQDQDFDAMAPENVSPLVVWLGSAEARDVTGKVF 272
Query: 240 VVDGG 244
            V+GG
Sbjct: 273 EVEGG 277

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 32/223 (14%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKS 101
           L  + G  +     DV     +  +VD A+A++G +DI+ +N GI ++G   S+ D   S
Sbjct: 101 LVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWS 160
Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQ-----HKGCILFTASACTEIAGIGSPAYTVSKY 156
           D   +L  N     +GA HA R ++P        G ++F +S        G   Y  SK+
Sbjct: 161 D---ILQTN----LIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213
Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-------- 208
           G+  L+  LA E+ ++ +RVN V+P      +++  ++N  +L+ FL  + N        
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNP----GAVNTEMALNEKLLKMFLPHLENPTREDAAE 269
Query: 209 LRGQV-------LNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           L  Q+       +  E ++NA  +LA+DEA  + G  + VDGG
Sbjct: 270 LFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG 312

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 117/245 (47%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            EGK+               +     GAKV+     +N  QA++  LG +   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              I ++++   A++G++DI+ NNAGI       ++     + + ++  N +  F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ +  G I+   S    +   G   Y  +K G+I   K LA E+   G+ VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G +    +R +++       L+++    G++  A+ IANA  +LA+DEA+ +TG  L 
Sbjct: 181 P-GFIETDMTR-ALSDDQRAGILAQV--PAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 241 VDGGF 245
           V+GG 
Sbjct: 237 VNGGM 241

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 8/199 (4%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G +V     DV + +++ N+V TA+  +G++DI+ NNAGI       +L   + D D VL
Sbjct: 54  GINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL--MLKMSEKDWDDVL 111
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
             N    +L  K  +++M+ Q  G I+   S    I   G   Y  SK G+I   K +A 
Sbjct: 112 NTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINP-AILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           E    G+  N V+P G++   +    + P  + E +L+ +   R      E +AN   +L
Sbjct: 172 EFAAKGIYCNAVAP-GIIK--TDMTDVLPDKVKEMYLNNIPLKR--FGTPEEVANVVGFL 226
Query: 227 ATDEASDVTGLNLVVDGGF 245
           A+D+++ +TG  + +DGG 
Sbjct: 227 ASDDSNYITGQVINIDGGL 245

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 24/236 (10%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           F E GAKV+I D   ++G+  A  +G  + + +   D + ED  T L D     +G +  
Sbjct: 26  FVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 81  MYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           + NNAGI V++   SV +T  ++  ++LAVN  G F G +   + M  +  G  +   S+
Sbjct: 86  LVNNAGIAVNK---SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS 142
Query: 140 CTEIAGIGSP---AYTVSKYGIIALVKILAAE--LRQYGLRVNCVSP----YGLVSGISS 190
                 +G P   AY  SK  +  + K  A +  L+ Y +RVN V P      LV  +  
Sbjct: 143 IEGF--VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-- 198
Query: 191 RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
                P   EA         G +     IA   +YLA++E+   TG   VVDGG++
Sbjct: 199 -----PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 109/227 (48%), Gaps = 6/227 (2%)
Query: 21  KLFHENGAKVVIADV-QDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +   ++GA VV++   Q N+ QA+A   GE   V    C V   ++   LV TAV  +G 
Sbjct: 33  RRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGG 92
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
           +DI+ +NA  V+  F S++D  +   D+ L +N     L  K     M  +  G ++  +
Sbjct: 93  IDILVSNAA-VNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVS 151
Query: 138 SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
           S        G   Y VSK  ++ L K LA EL    +RVNC++P GL+    SR      
Sbjct: 152 SIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAP-GLIKTSFSRMLWMDK 210
Query: 198 ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
             E  + E   +R ++   E  A    +L +++AS +TG  +VV GG
Sbjct: 211 EKEESMKETLRIR-RLGEPEDCAGIVSFLCSEDASYITGETVVVGGG 256

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 113/225 (50%), Gaps = 10/225 (4%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +L H+ G+KV+I+   +   ++L   L ++     C++ +++E +NL+    +K   LDI
Sbjct: 32  RLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLI----SKTSNLDI 87
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           +  NAGI     A  +     D D+V+ +N    F+  + A + MI +  G I+  +S  
Sbjct: 88  LVCNAGITSDTLA--IRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIV 145
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
                 G   Y  SK G+I + K L+ E+   G+ VN V+P  + S ++ +  +N    E
Sbjct: 146 GIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDK--LNEKQRE 203
Query: 201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           A + ++    G     E +A A  +LA++ AS +TG  L V+GG 
Sbjct: 204 AIVQKIP--LGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGGM 246

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNAGI       ++   + +   ++  N T  F  +K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   +  +K G+I   K +A E+   G+ VN V+
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 188 PGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 241 VDGGF 245
           V+GG 
Sbjct: 244 VNGGM 248

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 41/274 (14%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               K F + GAKVVI D      + +A ++G+    +  D++ 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E ++   V+ A++K+GK+DI+ NNAGI  +   + L  P+ + DR++ VN  G +L    
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPE-EFDRIVGVNVRGVYLMTSK 125
Query: 121 AARVMIPQHK-------GCILFTASACTEIAGIGSP-----AYTVSKYGIIALVKILAAE 168
               +IP  K        C++   ++     G G P      Y  +K  ++++ K LA E
Sbjct: 126 ----LIPHFKENGAKGQECVILNVAST----GAGRPRPNLAWYNATKGWVVSVTKALAIE 177
Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE-----MGNLR-----GQVLNAEG 218
           L    +RV  ++P   V+G +        +L  F+ E         R     G++L  + 
Sbjct: 178 LAPAKIRVVALNP---VAGETP-------LLTTFMGEDSEEIRKKFRDSIPMGRLLKPDD 227
Query: 219 IANAALYLATDEASDVTGLNLVVDGGFSVANPSL 252
           +A AA +L + +AS +TG+ L VDGG S+   S+
Sbjct: 228 LAEAAAFLCSPQASMITGVALDVDGGRSIGGRSI 261

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 3/255 (1%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LE KV               ++    GA+VV+AD+ +      A  +G    +   D+T+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN 68
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E  +  L+D  +  +G+LDI+ NNA   D     V        D    VN  G  L  K+
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   +I    G I+  +SA    A   S AY  +K  I  L + +A +  ++G+R N ++
Sbjct: 129 AIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P GLV        +   I++ F +   +L G++     IA    +LA+D A+ +TG  + 
Sbjct: 189 P-GLVRTPRLEVGLPQPIVDIFATH--HLAGRIGEPHEIAELVCFLASDRAAFITGQVIA 245
Query: 241 VDGGFSVANPSLMKF 255
            D G     P L + 
Sbjct: 246 ADSGLLAHLPGLPQI 260

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 117/245 (47%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            EGK+               +     GAKV+     +N  QA++  LG +   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              I ++++   A++G++DI+ NNAGI       ++     + + ++  N +  F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ +  G I+   S    +   G   +  +K G+I   K LA E+   G+ VN V+
Sbjct: 121 VMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVA 180
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G +    +R +++       L+++    G++  A+ IANA  +LA+DEA+ +TG  L 
Sbjct: 181 P-GFIETDMTR-ALSDDQRAGILAQV--PAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 241 VDGGF 245
           V+GG 
Sbjct: 237 VNGGM 241

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
           +G D   +  DVTSE EI         +   +DI+ NNAGI  R    +++   +D  RV
Sbjct: 73  VGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFR--KPMIELETADWQRV 130
Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILA 166
           +  N T  F+  + AA+ MIP+  G I+   S  +E+A      YTV+K GI  L + +A
Sbjct: 131 IDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMA 190
Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           AE  QYG++ N + P  +++ ++     NP   +A++      + +    + +   A++L
Sbjct: 191 AEWAQYGIQANAIGPGYMLTDMNQALIDNPE-FDAWVKARTPAK-RWGKPQELVGTAVFL 248
Query: 227 ATDEASDVTGLNLVVDGGF 245
           +   +  V G  + VDGG 
Sbjct: 249 SASASDYVNGQIIYVDGGM 267

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 81.6 bits (200), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 23  FHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           F + GA VV+ D++    +A+A  +   G     + C+VT E     ++  A+ ++GK+ 
Sbjct: 32  FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           ++ NNAG    G     D P SD +    +N    F  ++ AA  M     G IL  +S 
Sbjct: 92  VLVNNAG---GGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSM 148
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
             E   +   +Y  SK  +  L + +A ++   G+RVN ++P G +   +    + P I 
Sbjct: 149 AGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP-GAIKTDALATVLTPEIE 207
Query: 200 EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            A L       G++  A+ IANAAL+L +  A+ ++G  L V GG
Sbjct: 208 RAMLKH--TPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG 250

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 81.3 bits (199), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNA I       ++   + +   ++  N T  F  +K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNAAITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   Y  +K G+I   K +A E+   G+ VN V+
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 188 PGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 241 VDGGF 245
           V+GG 
Sbjct: 244 VNGGM 248

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 80.9 bits (198), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 113/259 (43%), Gaps = 24/259 (9%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GK                + +   GA+V IAD+     +A A ++G   C I  DVT 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +  I   V   + ++G +DI+ NNA + D   A +++  +   DR+ A+N +G     + 
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFD--LAPIVEITRESYDRLFAINVSGTLFMMQA 120
Query: 121 AARVMIPQHKGC-ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR MI   +G  I+  AS            Y  +K  +I+L +     L ++G+ VN +
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 180
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLR--------------GQVLNAEGIANAALY 225
           +P G+V G           ++A  ++  NL               G++  AE +   A++
Sbjct: 181 AP-GVVDGEHWDG------VDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIF 233
Query: 226 LATDEASDVTGLNLVVDGG 244
           LAT EA  +      VDGG
Sbjct: 234 LATPEADYIVAQTYNVDGG 252

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 80.9 bits (198), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 118/245 (48%), Gaps = 6/245 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 69
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNA I       ++   + +   ++  N T  F  +K 
Sbjct: 70  PESIEAVLKAITDEFGGVDILVNNADITRDNL--LMRMKEEEWSDIMETNLTSIFRLSKA 127
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   Y  +K G+I   K +A E+   G+ VN V+
Sbjct: 128 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 187
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 188 PGFIETDMTK--ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 241 VDGGF 245
           V+GG 
Sbjct: 244 VNGGM 248

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 111/228 (48%), Gaps = 11/228 (4%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F   GA V + D++   G+ +A  +G    +   D+  E E    V+ A    G++D++ 
Sbjct: 26  FAREGALVALCDLRPE-GKEVAEAIGG--AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           NNA I   G A  +  P  +  RVL VN T     +  AAR M     G I+  AS    
Sbjct: 83  NNAAIAAPGSALTVRLP--EWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 140
Query: 143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPAI 198
            A   + AY  SK G++ L + LA +L    +RVN V+P G ++  +   +I    +P  
Sbjct: 141 FAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAP-GAIATEAVLEAIALSPDPER 199
Query: 199 LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
                 ++  LR ++   E +A A L+LA+++AS +TG  L VDGG +
Sbjct: 200 TRRDWEDLHALR-RLGKPEEVAEAVLFLASEKASFITGAILPVDGGMT 246

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 17/230 (7%)
Query: 22  LFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
           LF   GA +V  D ++ L       L  +   +  DV+    +  +   A+ ++G+L  +
Sbjct: 25  LFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84
Query: 82  YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
            + AG+     +   + P    ++VL VN TG FL A+ A  V+  +  G ++ T S   
Sbjct: 85  AHFAGVAHSALS--WNLPLEAWEKVLRVNLTGSFLVARKAGEVL--EEGGSLVLTGS--- 137
Query: 142 EIAGIGS---PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI 198
            +AG+G+     Y   K G++ L + LA EL + G+RVN + P GL+        + P  
Sbjct: 138 -VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLP-GLIQ-TPMTAGLPPWA 194
Query: 199 LEAFLSEMG-NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            E    E+G +  G+    E +A AAL+L ++E++ +TG  L VDGG S+
Sbjct: 195 WE---QEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYVDGGRSI 241

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 24/236 (10%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           F E GAKV+I     ++G+  A  +G  + + +   D + ED  T L D     +G +  
Sbjct: 26  FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 81  MYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           + NNAGI V++   SV +T  ++  ++LAVN  G F G +   + M  +  G  +   S+
Sbjct: 86  LVNNAGIAVNK---SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSS 142
Query: 140 CTEIAGIGSP---AYTVSKYGIIALVKILAAE--LRQYGLRVNCVSP----YGLVSGISS 190
                 +G P   AY  SK  +  + K  A +  L+ Y +RVN V P      LV  +  
Sbjct: 143 IEGF--VGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-- 198
Query: 191 RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
                P   EA         G +     IA   +YLA++E+   TG   VVDGG++
Sbjct: 199 -----PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATGSEFVVDGGYT 249

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/198 (29%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G D   I  +V   DE+   +   V+++G LD++ NNAGI       +    + + D V+
Sbjct: 53  GVDSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNL--LXRXKEQEWDDVI 110
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
             N  G F   + A    + Q  G I+  +S    +   G   Y  +K G+I L K  A 
Sbjct: 111 DTNLKGVFNCIQKATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAAR 170
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYL 226
           EL   G+ VN V+P  +VS  +  ++++  + E  L+++   R GQ  +   IAN   +L
Sbjct: 171 ELASRGITVNAVAPGFIVSDXT--DALSDELKEQXLTQIPLARFGQDTD---IANTVAFL 225
Query: 227 ATDEASDVTGLNLVVDGG 244
           A+D+A  +TG  + V+GG
Sbjct: 226 ASDKAKYITGQTIHVNGG 243

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD 102
           L  K G    Y++ D++      + +  A    G LDI+ NNAGI  +  A + + P   
Sbjct: 49  LESKFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGI--QHTAPIEEFPVDK 106
Query: 103 LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV 162
            + ++A+N +  F G   A  +M  Q  G I+  ASA   +A +   AY  +K+G++ L 
Sbjct: 107 WNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLT 166
Query: 163 KILAAELRQYGLRVNCVSPYGL--------VSGISSRNSIN--PAILEAFLSEMGNLRGQ 212
           K+ A E    G+  N + P  +        +  IS +  I+   A  E    +  +L  Q
Sbjct: 167 KVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSL--Q 224
Query: 213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
            +  E +  AA++L++  A  +TG  L +DGG++
Sbjct: 225 FVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWT 258

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 16/234 (6%)
Query: 27  GAKVVIADVQDNLGQALACKLGE-----DVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
           GAK+ + DV     +A    + E     +V     DV+ E ++   V     ++G++D  
Sbjct: 37  GAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGF 96
Query: 82  YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
           +NNAGI  +   +   T  ++ D+V+++N  G FLG +   ++M  Q  G ++ TAS   
Sbjct: 97  FNNAGIEGKQNPTESFT-AAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG 155
Query: 142 EIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGI--SSRNSINPA- 197
            I GIG+ + Y  +K+G++ L +  A E  +YG+R+N ++P  + + +  +S   ++P  
Sbjct: 156 -IRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPEN 214
Query: 198 ---ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
                E F+    N   +   A  IA    +L +D+AS V    + +DGG S A
Sbjct: 215 PRKAAEEFIQV--NPSKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 25  ENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN 84
           E GA+V++    ++    +  + G  V  +  D+   +EI  L   A    G +D+++ N
Sbjct: 30  EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 89
Query: 85  AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA 144
           AG+ +          ++  DR  AVNT G F   +    ++  +  G I+FT+S   E  
Sbjct: 90  AGVSE--LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVFTSSVADEGG 145
Query: 145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
             G   Y+ SK  +++   +LAAEL   G+RVN VSP  + +       I  A    F +
Sbjct: 146 HPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKT 205
Query: 205 EMGNLRGQVLN--AEGIANAALYLATDEASDVTGLNLVVDGGF 245
              N+     N  A+ +A A L+LA  EA+  TG  L VDGG 
Sbjct: 206 LGDNITPXKRNGTADEVARAVLFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 79.0 bits (193), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 7/223 (3%)
Query: 25  ENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN 84
           E GA+V++    ++    +  + G  V  +  D+   +EI  L   A    G +D+++ N
Sbjct: 29  EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHIN 88
Query: 85  AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA 144
           AG+ +          ++  DR  AVNT G F   +    ++  +  G I+FT+S   E  
Sbjct: 89  AGVSE--LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLI--REGGSIVFTSSVADEGG 144
Query: 145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
             G   Y+ SK  +++   +LAAEL   G+RVN VSP  + +       I  A    F +
Sbjct: 145 HPGXSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKT 204
Query: 205 EMGNLRGQVLN--AEGIANAALYLATDEASDVTGLNLVVDGGF 245
              N+     N  A+ +A A L+LA  EA+  TG  L VDGG 
Sbjct: 205 LGDNITPXKRNGTADEVARAVLFLAF-EATFTTGAKLAVDGGL 246

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV  +  +  LV   + ++G+LD++  NAG++  G   V +      D V+ VN TG + 
Sbjct: 85  DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWG--RVWELTDEQWDTVIGVNLTGTWR 142
Query: 117 GAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             +     MI   + G I+  +S+    A  G+  Y+ SK+G+ AL   LA EL +YG+R
Sbjct: 143 TLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIR 202
Query: 176 VNCVSPYGLVSGISSRNSI------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
           VN + PY + + +    ++      +P+ + +F   M       + A+ +A+   +LA D
Sbjct: 203 VNSIHPYSVETPMIEPEAMMEIFARHPSFVHSF-PPMPVQPNGFMTADEVADVVAWLAGD 261
Query: 230 EASDVTGLNLVVDGG 244
            +  +TG  + VD G
Sbjct: 262 GSGTLTGTQIPVDKG 276

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 21/245 (8%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            EGK+               +     GAKV+     +N  QA++  LG +   +  +VT 
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 62
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              I ++++   A++G++DI+ NNAGI       ++     + + ++  N +  F  +K 
Sbjct: 63  PASIESVLEKIRAEFGEVDILVNNAGITRDNL--LMRMKDEEWNDIIETNLSSVFRLSKA 120
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ +  G I+            G   Y  +K G+I   K LA E+   G+ VN V+
Sbjct: 121 VMRAMMKKRHGRIITIG---------GQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 171
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G    I + +     IL    +      G++  A+ IANA  +LA+DEA+ +TG  L 
Sbjct: 172 P-GF---IETSDDQRAGILAQVPA------GRLGGAQEIANAVAFLASDEAAYITGETLH 221
Query: 241 VDGGF 245
           V+GG 
Sbjct: 222 VNGGM 226

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+ E ++  ++ TA+  +G +D++ NNAGI       ++   KS  D V+ +N TG FL
Sbjct: 59  DVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL--LIRMKKSQWDEVIDLNLTGVFL 116
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             + A ++M+ + KG I+  AS    I  IG   Y  +K G+I   K  A E     + V
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 177 NCVSPYGLVSGISSR--NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA-TDEASD 233
           N V P  + S ++++    +   IL           G+    E +A    +LA +  AS 
Sbjct: 177 NVVCPGFIASDMTAKLGEDMEKKILGTI------PLGRTGQPENVAGLVEFLALSPAASY 230
Query: 234 VTGLNLVVDGGFSV 247
           +TG    +DGG ++
Sbjct: 231 ITGQAFTIDGGIAI 244

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 113/241 (46%), Gaps = 24/241 (9%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F   GAKV + D        L    G++V  I  DV S ++        VA++GK+D + 
Sbjct: 25  FVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTLI 84
Query: 83  NNAGIVDRGFASVLDTPKSDL----DRVLAVNTTGGFLGAKHAARVMIP---QHKGCILF 135
            NAGI D   A ++D P+  L    D V  +N  G      HA +  +P     +G ++F
Sbjct: 85  PNAGIWDYSTA-LVDLPEESLDAAFDEVFHINVKGYI----HAVKACLPALVASRGNVIF 139
Query: 136 TASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI- 194
           T S        G P YT +K+ I+ LV+ LA EL  Y +RVN V   G+ S +   +S+ 
Sbjct: 140 TISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLG 198
Query: 195 --NPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLAT-DEASDVTGLNLVVDGGFS 246
             + AI    L++M  L+     G++   E    A ++ AT  +A+  TG  L  DGG  
Sbjct: 199 MGSKAISTVPLADM--LKSVLPIGRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGLG 256
Query: 247 V 247
           V
Sbjct: 257 V 257

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 104/229 (45%), Gaps = 26/229 (11%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVTSEDE--ITNLVDTAVAKYGK 77
           K F + GAKVV+ D +D        K  G +      DV  + E  I N++D    KYG 
Sbjct: 340 KWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVID----KYGT 395
Query: 78  LDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFT 136
           +DI+ NNAGI+ DR FA +    K + D V  V+  G F  ++ A    + +  G I+  
Sbjct: 396 IDILVNNAGILRDRSFAKM---SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINI 452
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
            S        G   Y+ SK GI+ L K +A E  +  ++VN V+P+              
Sbjct: 453 TSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPH-------------- 498
Query: 197 AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           A     LS M      + +A+ +A   +YL TD+   VTG    + GG+
Sbjct: 499 AETAMTLSIMREQDKNLYHADQVAPLLVYLGTDDVP-VTGETFEIGGGW 546

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 10/249 (4%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADV-QDNLGQALACKLGE--DVCYIHCD 57
           LE KV               +   ++GA VV++   Q+N+ + +A   GE   V    C 
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71
Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V   ++   LV  AV  +G +DI+ +NA  V+  F +++D  +   D++L VN     L 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAA-VNPFFGNIIDATEEVWDKILHVNVKATVLM 130
Query: 118 AKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            K     M  +  G +L  +S  A      +G   Y VSK  ++ L K LA EL    +R
Sbjct: 131 TKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGP--YNVSKTALLGLTKNLAVELAPRNIR 188
Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VNC++P  + +  S    ++ A  E ++ E   +R ++ N E  A    +L +++AS +T
Sbjct: 189 VNCLAPGLIKTNFSQVLWMDKARKE-YMKESLRIR-RLGNPEDCAGIVSFLCSEDASYIT 246
Query: 236 GLNLVVDGG 244
           G  +VV GG
Sbjct: 247 GETVVVGGG 255

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 16/235 (6%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +   + GA V IAD+     QA+   L      +  DVT    +   +  A+   G  D+
Sbjct: 30  RALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL 89
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASA 139
           +  NAG+        +D    + D    VN  G FL  + A R  +  + KG I+ TAS 
Sbjct: 90  LCANAGV--STMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASL 147
Query: 140 CTEIAGIGSP---AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
               A +G+P    Y+ SK+ +    + LA E+    +RVNCV P  + + +  R  I  
Sbjct: 148 A---AKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWE 204
Query: 197 AIL-----EAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           A L     EA  +E  +L   G++   E +A+  ++LA+D A  +TG  + V GG
Sbjct: 205 AELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG 259

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 6/190 (3%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+ ++EI+ +++  + ++  +DI+ NNAGI        L     + + VL  N    F 
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNL--FLRMKNDEWEDVLRTNLNSLFY 158
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             +  ++ MI    G I+  +S       +G   Y+ SK G+I   K LA EL    + V
Sbjct: 159 ITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218
Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N ++P  + S ++ +  I+  I +  +S +    G++   E +AN A +L++D++  + G
Sbjct: 219 NAIAPGFISSDMTDK--ISEQIKKNIISNIP--AGRMGTPEEVANLACFLSSDKSGYING 274
Query: 237 LNLVVDGGFS 246
              V+DGG S
Sbjct: 275 RVFVIDGGLS 284

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-----DRGFASVLD 97
           L   +G  +     DV   + ++  +   + + G+LDI+  NAGI      D G+  V+D
Sbjct: 68  LVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVID 127
Query: 98  TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP-----AYT 152
                      VN TG +   K A   ++ Q  G  +   S+   +AG+GS       Y 
Sbjct: 128 -----------VNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYV 176
Query: 153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM------ 206
            +K+G++ L+++ A  L    +RVN + P G+ + +     IN      +L++M      
Sbjct: 177 AAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPM-----INNEFTREWLAKMAAATDT 231
Query: 207 ----GN-LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
               GN +  +VL  E +ANA  +L +D+A  +TG+ L VD GF
Sbjct: 232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
           LG D   I  D+    EI  L D AVA +G LDI  +N+G+V   F  + D  + + DRV
Sbjct: 66  LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRV 123
Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKIL 165
            ++NT G F  A+ A R +     G I+ T+S  ++   +   + Y+ SK  + + V+I 
Sbjct: 124 FSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIF 181
Query: 166 AAELRQYGLRVNCVSPYGLVSG----ISSRNSINPAILEAFLSEMGNLRGQVLNAEG--- 218
           + +     + VN V+P G V+     +S     N     A   +        L+  G   
Sbjct: 182 SKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ 241
Query: 219 -IANAALYLATDEASDVTGLNLVVDGG 244
            +AN   +L + E   V G  L +DGG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 22/215 (10%)
Query: 39  LGQALACKLGEDVCYIHCDVTSED-------EITNLVDTAVAKYGKLDIMYNNAGIV-DR 90
           + + +A K G     +  ++ SE+       EI NLVD        +DI+ NNAGI  D+
Sbjct: 47  VAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD-------GIDILVNNAGITRDK 99
Query: 91  GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA 150
            F   L     D + VL VN TG FL  +++ R MI Q  G I+  +S       +G   
Sbjct: 100 LF---LRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVN 156
Query: 151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR 210
           Y+ +K G+I   K LA EL    + VN V+P  + + +++   ++  I + +  ++    
Sbjct: 157 YSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTA--VLSEEIKQKYKEQIP--L 212
Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           G+  + E +AN  L+L ++ AS +TG  + V+GG 
Sbjct: 213 GRFGSPEEVANVVLFLCSELASYITGEVIHVNGGM 247

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 12/232 (5%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVC-YIHCDVTSEDEITNLVDTAVAKYGKLD 79
           + F  +GA++++ D +       A +LG  V   I  DVT + E              + 
Sbjct: 29  RAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT-DAEAMTAAAAEAEAVAPVS 87
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           I+ N+AGI        L+T  +   +V+AVN  G F  ++   R M+ +  G I+   S 
Sbjct: 88  ILVNSAGIAR--LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSM 145
Query: 140 CTEIAGIGSP----AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN 195
              I  +  P    +Y  SK  +  L + LAAE    G+RVN ++P  + + ++ +    
Sbjct: 146 SGTI--VNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRER 203
Query: 196 PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           P + E +L +M  + G+      IA AAL+LA+  AS VTG  L VDGG++V
Sbjct: 204 PELFETWL-DMTPM-GRCGEPSEIAAAALFLASPAASYVTGAILAVDGGYTV 253

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 33/248 (13%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLG----EDVCYIH------CDVTSEDE------ITN 66
           F   G K ++      LGQA+A  L     E VC          D+ ++D       + +
Sbjct: 5   FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLID 64
Query: 67  LVDTAVAKY----GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
             D   AK        DI+ NNAGI+ R  A  ++  + D D V+ VN    F   +  A
Sbjct: 65  FADPLAAKDSFTDAGFDILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFA 122
Query: 123 RVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           + ++ + + G ++  AS  +   GI  P+YT +K+G+  L K+LA E    G+ VN ++P
Sbjct: 123 KELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAP 182
Query: 182 YGL----VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
             +       + +  + N AILE   +      G+  ++E IA AA++L++  A  V G 
Sbjct: 183 GYIETNNTEALRADAARNKAILERIPA------GRWGHSEDIAGAAVFLSSAAADYVHGA 236
Query: 238 NLVVDGGF 245
            L VDGG+
Sbjct: 237 ILNVDGGW 244

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 33  ADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGF 92
           A+V D L   L  K G     I  D  SE +    + T V   G L  + NNAG+V    
Sbjct: 64  AEVADALKNELEEK-GYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRDKL 122
Query: 93  ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT 152
           A  + T   D   V+  N T  F+G + A +VM     G ++  AS   E   +G   Y+
Sbjct: 123 AIKMKTE--DFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYS 180
Query: 153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQ 212
            SK G+IA+ K  A E     +R N V+P G +        +N  + +   ++   ++  
Sbjct: 181 ASKGGMIAMSKSFAYEGALRNIRFNSVTP-GFI-----ETDMNANLKDELKADY--VKNI 232
Query: 213 VLN----AEGIANAALYLATDEASDVTGLNLVVDGGF 245
            LN    A+ +A A  +L +D +S +TG  L V+GG 
Sbjct: 233 PLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGGL 269

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 74.3 bits (181), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 103/222 (46%), Gaps = 22/222 (9%)
Query: 26  NGAKVVIADVQDN-LG----QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
            GA VVI+D  +  LG    Q     LG  V  + CDVTS + +  L+   V K G+LD+
Sbjct: 46  EGADVVISDYHERRLGETRDQLADLGLGR-VEAVVCDVTSTEAVDALITQTVEKAGRLDV 104
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASA 139
           + NNAG+   G   V+D    + DRVL V  T      + A R      H G I+  AS 
Sbjct: 105 LVNNAGL--GGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASV 162
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP----YGLVSGISSRNSIN 195
               A      Y  +K G++AL +  A E  ++G+R+N VSP    +  +   SS   ++
Sbjct: 163 LGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLD 222
Query: 196 P-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
             A  EAF        G+      +A    +LA+D +S +TG
Sbjct: 223 RLASDEAF--------GRAAEPWEVAATIAFLASDYSSYMTG 256

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 6/244 (2%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKV               +L  E GAKV+     ++  QA++  LG++      +VT+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGXALNVTN 66
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNAGI       +    + +   +   N T  F  +K 
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRDNL--LXRXKEEEWSDIXETNLTSIFRLSKA 124
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R    + +G I+   S        G   Y  +K G+I   K  A E+   G+ VN V+
Sbjct: 125 VLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVNTVA 184
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G +    ++ ++N     A L+++    G++ +   IA+A  +LA+ EA+ +TG  L 
Sbjct: 185 P-GFIETDXTK-ALNDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH 240
Query: 241 VDGG 244
           V+GG
Sbjct: 241 VNGG 244

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
           LG D   I  D+    EI  L D AVA +G LDI  +N+G+V   F  + D  + + DRV
Sbjct: 66  LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRV 123
Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKIL 165
            ++NT G F  A+ A R +     G I+ T+S  ++   +   + ++ SK  + + V+I 
Sbjct: 124 FSLNTRGQFFVAREAYRHLT--EGGRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRIF 181
Query: 166 AAELRQYGLRVNCVSPYGLVSG----ISSRNSINPAILEAFLSEMGNLRGQVLNAEG--- 218
           + +     + VN V+P G V+     +S     N     A   +        L+  G   
Sbjct: 182 SKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ 241
Query: 219 -IANAALYLATDEASDVTGLNLVVDGG 244
            +AN   +L + E   V G  L +DGG
Sbjct: 242 DVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTT 112
           +   DVT+E+E+   V+    KYG++DI+ NNAGI    ++ +  TP     R++ VN  
Sbjct: 57  HFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGI--EQYSPLHLTPTEIWRRIIDVNVN 114
Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           G +L AK+   VM+    G I+  AS  +  A   + AY  SK+ ++ L + +A +    
Sbjct: 115 GSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP- 173
Query: 173 GLRVNCVSPYGLVSGISSRNSI-----NPAILEAFLSEMGNLR--GQVLNAEGIANAALY 225
            +R N V P  +++ +  + +      +   +E  + E G     G++   E +A    +
Sbjct: 174 KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAF 233
Query: 226 LATDEASDVTGLNLVVDGGF 245
           LA+D +S +TG  L VDGG 
Sbjct: 234 LASDRSSFITGACLTVDGGL 253

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 37  DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL 96
           D   +AL  + G DV  +  D+   D    L   A   +G LD++ NNAGI       V+
Sbjct: 58  DAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP--QPVV 115
Query: 97  DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP-AYTVSK 155
           DT     D  +AVN     L A    + M+   +G  + T ++   +A +    AY  SK
Sbjct: 116 DTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK 175
Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN 215
            G++   K+LA EL  +G+R N V P  +++ +  R   + A     ++ +    G+   
Sbjct: 176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI--PLGRFAV 233
Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
              +++A ++LA+D AS + G+++ VDGG+++
Sbjct: 234 PHEVSDAVVWLASDAASMINGVDIPVDGGYTM 265

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 29  KVVIADVQDNLGQALACKLGED-----------------------------VCYIHCDVT 59
           K +I      +G+A+A +L ED                             V  +  ++ 
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             +  T LV  A    G LD + NNAGI       ++     D + VL  N +  F   +
Sbjct: 63  EAEAATALVHQAAEVLGGLDTLVNNAGITRDTL--LVRMKDEDWEAVLEANLSAVFRTTR 120
Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A ++M+    G I+   S    +   G   Y  SK G+I   + +A E  Q G+ VN V
Sbjct: 121 EAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAV 180
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P  + + ++ R  +   + EA+L ++    G+    E +A A  +L +++A  +TG  L
Sbjct: 181 APGFIETEMTER--LPQEVKEAYLKQIPA--GRFGRPEEVAEAVAFLVSEKAGYITGQTL 236
Query: 240 VVDGGFS 246
            VDGG +
Sbjct: 237 CVDGGLT 243

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
           LG  +     DV   D +   VD  V + G+LDI+  NA +   G       PK+  D +
Sbjct: 87  LGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRD-M 145
Query: 107 LAVNTTGGFLGAKHA-ARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVK 163
           + VN  G ++ A+ A   +M  +  G I+FT+S         IG+  Y  SK+G+  L++
Sbjct: 146 IDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGN--YIASKHGLHGLMR 203
Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--------------- 208
            +A EL    +RVN V P    S +++   +N      F  ++ N               
Sbjct: 204 TMALELGPRNIRVNIVCP----SSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV 259
Query: 209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           L    +    I+NA L+L +D+A  +TG++L VDGG
Sbjct: 260 LPIPYVEPADISNAILFLVSDDARYITGVSLPVDGG 295

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ D+ ++ G+A A KLG +  +   DVTSE ++   +  A  K+G++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 86  GI--------VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI        + +G    L+    D  RVL VN  G F   +  A  M          +G
Sbjct: 93  GIAVASKTYNLKKGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRG 148
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 149 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            +D+   LV  A+   G L ++ + A +  R  A  L+    +  RVL ++    FL A+
Sbjct: 53  EKDDPKGLVKRALEALGGLHVLVHAAAVNVRKPA--LELSYEEWRRVLYLHLDVAFLLAQ 110
Query: 120 HAARVMIPQHKGCILFTASACTEIAG--IGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            AA  M     G +LF  S  T  AG  +  PAYT +K  ++ L + LA E  + G+RVN
Sbjct: 111 AAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN 170
Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            + P  + +  +     NP + E   + +    G+    E IA  A  L  DEA  +TG 
Sbjct: 171 LLCPGYVETEFTLPLRQNPELYEPITARIPM--GRWARPEEIARVAAVLCGDEAEYLTGQ 228
Query: 238 NLVVDGGF 245
            + VDGGF
Sbjct: 229 AVAVDGGF 236

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 43  LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VD-RGFASVLDTPK 100
           L   L   +     DV   + + + VD+ V + G+LDI+  NAG+  D R    + D   
Sbjct: 70  LVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVW 129
Query: 101 SDLDRVLAVNTTGGFLGAKHAARVMIPQ-----HKGCILFTASACTEIAGIGSPAYTVSK 155
            D+   + +N TG +    H  +  +P        G I+ T+S     A   +  Y  +K
Sbjct: 130 QDM---IDINLTGVW----HTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAK 182
Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN------- 208
           +G+I L++  A EL  + +RVN V P    + +S+   +N      F  ++ N       
Sbjct: 183 HGVIGLMRAFAVELGPHMIRVNAVLP----TQVSTTMVMNDQTFRLFRPDLENPGPDDFA 238
Query: 209 --------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
                   L    ++A  I+NA L+LA+DE+  VTG++L VD G
Sbjct: 239 PISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAG 282

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ D+ ++ G+A A KLG +  +   DVTSE ++   +  A  K+G++D+  N A
Sbjct: 35  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 94
Query: 86  GI--------VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI        + +G    L+    D  RVL VN  G F   +  A  M          +G
Sbjct: 95  GIAVASKTYNLKKGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRG 150
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 151 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 200

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ D+ ++ G+A A KLG +  +   DVTSE ++   +  A  K+G++D+  N A
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCA 92
Query: 86  GI--------VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI        + +G    L+    D  RVL VN  G F   +  A  M          +G
Sbjct: 93  GIAVASKTYNLKKGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRG 148
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 149 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP 198

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 71.2 bits (173), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 105/221 (47%), Gaps = 6/221 (2%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
           +GA V+++D+     +A A  +G+    I  D++    +  L     A  G +DI+ NNA
Sbjct: 29  DGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNA 88
Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
            IV   F +  D       +++ VN TG F+  +     M    K   + + ++ T  AG
Sbjct: 89  SIVP--FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG 146
Query: 146 IGS-PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
             +  AY  +K G+I   + LA EL +Y +  N V+P GL+     + S +      F+ 
Sbjct: 147 TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP-GLIESDGVKASPHNEAF-GFVE 204
Query: 205 EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
            +  ++G+    E IA+   +LA+D+A  +TG  L VD G 
Sbjct: 205 MLQAMKGK-GQPEHIADVVSFLASDDARWITGQTLNVDAGM 244

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 71.2 bits (173), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 36/251 (14%)
Query: 22  LFHENGAKVVIA-----DVQDNLGQALACKLGE-DVCYIHCDVTSEDEITNLVDTAVAKY 75
           LF   GAKV I       +++   Q LA  + E +V  +  DVT++     ++ T + K+
Sbjct: 25  LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 76  GKLDIMYNNAGIVDRGFASVLDTPKS--DLDRVLAVNTTGGFLGAKHAARVMIPQHKGCI 133
           GKLDI+ NNAG       S   T +S    D  L +N            R +I   K  +
Sbjct: 85  GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL-----------RSVIALTKKAV 133
Query: 134 LFTASACTEIAGIGS-----------PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
              +S   EI  I S           P Y+++K  I    +  A +L Q+G+RVN +SP 
Sbjct: 134 PHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPG 193
Query: 183 GLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDEASD-VTG 236
            + +G  S   +     + F S M  ++     G +   + IA    +LA  + S  + G
Sbjct: 194 LVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLADRKTSSYIIG 253
Query: 237 LNLVVDGGFSV 247
             LVVDGG S+
Sbjct: 254 HQLVVDGGSSL 264

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 85/167 (50%), Gaps = 14/167 (8%)
Query: 23  FHENGAKVVIADV-QDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           F   GA++V++DV Q  L QA+    G+  D   + CDV   DE+  L D A    G +D
Sbjct: 51  FARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-----HKGCIL 134
           ++++NAGIV  G  + ++    D   V+ ++      G+ HA    +P+       G I 
Sbjct: 111 VVFSNAGIVVAGPLAQMN--HDDWRWVIDID----LWGSIHAVEAFLPRLLEQGTGGHIA 164
Query: 135 FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           FTAS    +   G   Y V+KYG++ L + LA E++  G+ V+ + P
Sbjct: 165 FTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP 211

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 11/195 (5%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAG-IVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           C V S +    LV   VA +G++D    NAG   D G   +LD      + V+ V+  G 
Sbjct: 80  CQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSG---ILDGSVEAWNHVVQVDLNGT 136
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP--AYTVSKYGIIALVKILAAELRQY 172
           F  AK        +  G ++ TAS    IA       +Y V+K G I + + LA E R +
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF 196
Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
             RVN +SP  + +G+S      P   +     M  +    L  E +  A +Y A+D ++
Sbjct: 197 A-RVNSISPGYIDTGLSD---FVPKETQQLWHSMIPMGRDGLAKE-LKGAYVYFASDAST 251
Query: 233 DVTGLNLVVDGGFSV 247
             TG +L++DGG++ 
Sbjct: 252 YTTGADLLIDGGYTT 266

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 21/202 (10%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D    D +  +VD  VA  G+LDI+  NAG+      +  D    D   V+ +N TG +
Sbjct: 80  VDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA--APQAWDDITPEDFRDVMDINVTGTW 137
Query: 116 LGA-KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
                 A R++     G I+  +SA           YT SK+ +  L +  AAEL ++ +
Sbjct: 138 NTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSI 197
Query: 175 RVNCV------SPYG---LVSGISSRNSINPA---ILEAFLSEMGNLRGQVLNAEGIANA 222
           RVN V      +P G   +V+ +      NP    +L  FL +       V   E IA+ 
Sbjct: 198 RVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDW------VAEPEDIADT 251
Query: 223 ALYLATDEASDVTGLNLVVDGG 244
             +LA+DE+  VT   + VD G
Sbjct: 252 VCWLASDESRKVTAAQIPVDQG 273

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 101/225 (44%), Gaps = 9/225 (4%)
Query: 23  FHENGAKVVIAD-VQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
           F   GA + IAD V     +A    LG  V  + CDV+   ++       ++ +G+ DI+
Sbjct: 27  FAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDIL 86
Query: 82  YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
            NNAGI         +       +   +N   GFL AK     M     G I+   S   
Sbjct: 87  VNNAGIYP--LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY 144
Query: 142 EIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA 201
            +       Y  +K   I   + LA++L + G+ VN ++P  LV   ++  S   A+ + 
Sbjct: 145 WLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAP-SLVRTATTEASALSAMFDV 203
Query: 202 FLSEMGNL-RGQV-LNAEGIANAALYLATDEASDVTGLNLVVDGG 244
             + +  + R QV L+  G   AA +LA+D+AS +TG  L VDGG
Sbjct: 204 LPNMLQAIPRLQVPLDLTG---AAAFLASDDASFITGQTLAVDGG 245

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ DV ++ G+  A KLG +  +   +VTSE E+   +  A  K+G++D+  N A
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 92
Query: 86  GIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI          +     L+    D  RV+ VN  G F   +  A VM          +G
Sbjct: 93  GIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRG 148
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 149 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 198

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 23  FHENGAKVVIADVQDNL-----GQALACKLGEDVCYIH----CDVTSEDEITNLVDTAVA 73
           F E GA VV+ D+  +      G   A K+ E++         +  S +E   +V TA+ 
Sbjct: 50  FAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRRGGKAVANYDSVEEGEKVVKTALD 109
Query: 74  KYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC 132
            +G++D++ NNAGI+ DR FA + D    D D +  V+  G F   + A   M  Q  G 
Sbjct: 110 AFGRIDVVVNNAGILRDRSFARISD---EDWDIIHRVHLRGSFQVTRAAWEHMKKQKYGR 166
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           I+ T+SA       G   Y+ +K G++ L   LA E R+  +  N ++P
Sbjct: 167 IIMTSSASGIYGNFGQANYSAAKLGLLGLANSLAIEGRKSNIHCNTIAP 215

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ DV ++ G+  A KLG +  +   +VTSE E+   +  A  K+G++D+  N A
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 92
Query: 86  GIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI          +     L+    D  RV+ VN  G F   +  A VM          +G
Sbjct: 93  GIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRG 148
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 149 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 198

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
            GA  V+ DV ++ G+  A KLG +  +   +VTSE E+   +  A  K+G++D+  N A
Sbjct: 32  QGATAVLLDVPNSEGETEAKKLGGNCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCA 91
Query: 86  GIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKG 131
           GI          +     L+    D  RV+ VN  G F   +  A VM          +G
Sbjct: 92  GIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQRG 147
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ TAS       +G  AY+ SK GI+ +   +A +L   G+RV  ++P
Sbjct: 148 VIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAP 197

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 16/206 (7%)
Query: 49  EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLA 108
           E    + CD+T  +++          +G ++++  NAG+       ++   + D   V+ 
Sbjct: 59  EGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVE 116
Query: 109 VNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
            N TG F   K A R M+   KG ++  +S    +   G   Y  SK G++   + LA E
Sbjct: 117 TNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARE 176
Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV-----LNAEGIANAA 223
           L    +  N V+P G V        +   + +    +  N+  QV        E IA   
Sbjct: 177 LGSRNITFNVVAP-GFVD-----TDMTKVLTD---EQRANIVSQVPLGRYARPEEIAATV 227
Query: 224 LYLATDEASDVTGLNLVVDGGFSVAN 249
            +LA+D+AS +TG  + VDGG  + +
Sbjct: 228 RFLASDDASYITGAVIPVDGGLGMGH 253

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 68.2 bits (165), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 14/226 (6%)
Query: 23  FHENGAKVV-IADVQDNLGQAL-ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
            H  GA+VV ++  Q +L   +  C   E VC    D  + +        A+   G +D+
Sbjct: 27  LHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER-------ALGSVGPVDL 79
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASA 139
           + NNA +        L+  K   DR   VN       ++  AR +I +   G I+  +S 
Sbjct: 80  LVNNAAVAL--LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
           C++ A      Y  +K  +  L K++A EL  + +RVN V+P  +++ +      +P   
Sbjct: 138 CSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA 197
Query: 200 EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           +  L+ +    G+    E + NA L+L +D +   TG  L V+GGF
Sbjct: 198 KTMLNRIP--LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 14/228 (6%)
Query: 21  KLFHENGAKVVIADV--QDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL 78
           K  H +GAKVV       D +  A  C   E VC    D+   D      + A+   G +
Sbjct: 25  KALHASGAKVVAVTRTNSDLVSLAKECPGIEPVC---VDLGDWDA----TEKALGGIGPV 77
Query: 79  DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTA 137
           D++ NNA +V       L+  K   DR  +VN    F  ++  AR MI +   G I+  +
Sbjct: 78  DLLVNNAALVI--MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVS 135
Query: 138 SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
           S    +       Y+ +K  +  L K +A EL  + +RVN V+P  +++ +  + S +P 
Sbjct: 136 SMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPE 195
Query: 198 ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
                L E   LR +    E + N+ L+L +D ++  +G  ++VD G+
Sbjct: 196 FARK-LKERHPLR-KFAEVEDVVNSILFLLSDRSASTSGGGILVDAGY 241

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 15/198 (7%)
Query: 50  DVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLA 108
           D+  +  D++  +    +V   + ++G++D + NNAG+ + + F   ++  + D D  L 
Sbjct: 69  DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPF---VEXTQEDYDHNLG 125
Query: 109 VNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY--TVSKYGIIALVKILA 166
           VN  G F   + AA   + Q  G I+   ++  +   +G P+   +++K G+ A+ + LA
Sbjct: 126 VNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLA 185
Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
            E  + G+RVN VSP G++     +   +PA   + L+ +  + G+      + +A LYL
Sbjct: 186 XEFSRSGVRVNAVSP-GVI-----KTPXHPAETHSTLAGLHPV-GRXGEIRDVVDAVLYL 238
Query: 227 ATDEASDVTGLNLVVDGG 244
             + A  +TG  L VDGG
Sbjct: 239 --EHAGFITGEILHVDGG 254

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 94/205 (45%), Gaps = 23/205 (11%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLD-TPKSDLDRVLAVNTTGGF 115
           DV   D +   VD+ V + G+LDI+  NAGI + G    LD T + D   ++ +N  G +
Sbjct: 84  DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG--DTLDKTSEEDWTEMIDINLAGVW 141
Query: 116 LGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
              K     MI   +G  I+ T+S     A   +  Y  +K+G++ L++    EL Q+ +
Sbjct: 142 KTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMI 201
Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN---------------LRGQVLNAEGI 219
           RVN V P    + + +    N    + F  ++ N               L    +    I
Sbjct: 202 RVNSVHP----THVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDI 257
Query: 220 ANAALYLATDEASDVTGLNLVVDGG 244
           +NA L+ A+DEA  +TG+ L +D G
Sbjct: 258 SNAVLFFASDEARYITGVTLPIDAG 282

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 15/221 (6%)
Query: 37  DNLGQ--ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS 94
           D+L +  AL  K G        DV     + + V  A    G +DI   NAGI     A 
Sbjct: 57  DDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIAL 114
Query: 95  VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS 154
           + +   +  D V+  N TG F      A  MI ++ G I+  +S     A     +Y  S
Sbjct: 115 LPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSS 174
Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLSEMGNLR 210
           K+G+I L K  A +L  YG+ VN V+P  + + ++  +    ++ P + +  L ++ ++ 
Sbjct: 175 KWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVF 234
Query: 211 GQV-------LNAEGIANAALYLATDEASDVTGLNLVVDGG 244
             +       L  E +  A L+L  + +S +TG  L +D G
Sbjct: 235 ASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG 275

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 26  NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
           +GA V+++D+     +A A  +G+    I  D++    +  L     A  G +DI+ NNA
Sbjct: 29  DGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDILVNNA 88
Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
            IV   F +  D       +++ VN TG F+  +          K   + + ++ T  AG
Sbjct: 89  SIVP--FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQXRAAGKAGRVISIASNTFFAG 146
Query: 146 I-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
                AY  +K G+I   + LA EL +Y +  N V+P GL+     + S +      F+ 
Sbjct: 147 TPNXAAYVAAKGGVIGFTRALATELGKYNITANAVTP-GLIESDGVKASPHNEAF-GFVE 204
Query: 205 EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            +   +G+    E IA+   +LA+D+A  +TG  L VD G
Sbjct: 205 XLQAXKGK-GQPEHIADVVSFLASDDARWITGQTLNVDAG 243

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 35/267 (13%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ--------DNLGQALACKLGEDVC 52
           L+G+V               K   E G+ VVIA  +        D L   L       V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAG---------IVDRGFASVLDTPKSDL 103
            I C++ +E+E+ NLV + +  +GK++ + NN G         I  +G+ +VL+T     
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLET----- 130
Query: 104 DRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT-VSKYGIIALV 162
                 N TG F   K      + +H G I+         AG     ++  ++ G+  L 
Sbjct: 131 ------NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGFPLAVHSGAARAGVYNLT 182
Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRN--SINPAILEAFLSEMGNLRGQVLNAEGIA 220
           K LA E    G+R+NCV+P  + S  +  N  S   +  E    ++   R  V   E ++
Sbjct: 183 KSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGV--PEEVS 240
Query: 221 NAALYLATDEASDVTGLNLVVDGGFSV 247
           +   +L +  AS +TG ++ VDGG S+
Sbjct: 241 SVVCFLLSPAASFITGQSVDVDGGRSL 267

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 7/166 (4%)
Query: 85  AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEI 143
           AGI    F  +L   + D D+V+AVN  G FL  + AA+ ++    +G I+  +S   ++
Sbjct: 100 AGITQDEF--LLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV 157
Query: 144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL 203
             +G   Y  SK G+I L +  A EL ++G+R N V P  + + ++ +    P  +   +
Sbjct: 158 GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK---VPQKVVDKI 214
Query: 204 SEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN 249
           +EM  + G + + E +A+   +LA++++  +TG ++ V GG  +A 
Sbjct: 215 TEMIPM-GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAE 259

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 33/202 (16%)
Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDL---DRVLAVNT 111
             D+T    +  L +       +LD++ NNAGI         D  + DL   +RVL +N 
Sbjct: 60  ELDITDSQRLQRLFEA----LPRLDVLVNNAGISR-------DREEYDLATFERVLRLNL 108
Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
           +   L A   AR ++ Q  G IL  AS  +       PAY+ SK  I+ L + LA E   
Sbjct: 109 SAAML-ASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAA 167
Query: 172 YGLRVNCVSP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
             +RVN ++P         GL + + +   I   +    L+  G        A  +A+AA
Sbjct: 168 ERIRVNAIAPGWIDTPLGAGLKADVEATRRI---MQRTPLARWG-------EAPEVASAA 217
Query: 224 LYLATDEASDVTGLNLVVDGGF 245
            +L    AS VTG  L VDGG+
Sbjct: 218 AFLCGPGASFVTGAVLAVDGGY 239

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           + CDVT  D +           G ++++ +NAG+    F  ++   +   ++V+  N TG
Sbjct: 58  VECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 115
Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQY 172
            F  A+ A+R M     G ++F  S      GIG+ A Y  SK G+I + + +A EL + 
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGSW-GIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
            +  N V+P G +    +R +++  I +  L  +   R  V     +A    +LA+++AS
Sbjct: 175 NVTANVVAP-GYIDTDMTR-ALDERIQQGALQFIPAKR--VGTPAEVAGVVSFLASEDAS 230
Query: 233 DVTGLNLVVDGGFSVAN 249
            ++G  + VDGG  + +
Sbjct: 231 YISGAVIPVDGGMGMGH 247

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 8/194 (4%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV    ++  +    +A+  +LD + N AGI+  G    L   K D  +  AVN  G F 
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQL--SKEDWQQTFAVNVGGAFN 111
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             +        Q  G I+  AS       IG  AY  SK  + +L   +  EL   G+R 
Sbjct: 112 LFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171
Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNL------RGQVLNAEGIANAALYLATDE 230
           N VSP    + +     ++    E  +   G         G++   + IAN  L+LA+D 
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL 231
Query: 231 ASDVTGLNLVVDGG 244
           AS +T  ++VVDGG
Sbjct: 232 ASHITLQDIVVDGG 245

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 23/237 (9%)
Query: 25  ENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
           ++G  V IAD  D   +A+A ++   G     +  DV+  D++   V+ A    G  D++
Sbjct: 24  KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 83
Query: 82  YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASAC 140
            NNAG+        + TP+  +D+V  +N  G   G + A      + H G I+   +AC
Sbjct: 84  VNNAGVAPSTPIESI-TPEI-VDKVYNINVKGVIWGIQAAVEAFKKEGHGGKII---NAC 138
Query: 141 TEIAGIGSP---AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
           ++   +G+P    Y+ SK+ +  L +  A +L   G+ VN   P G+V        I+  
Sbjct: 139 SQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP-GIVK-TPMWAEIDRQ 196
Query: 198 ILEAFLSEMGN---------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           + EA    +G            G++   E +A    YLA+ ++  +TG +L++DGG 
Sbjct: 197 VSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 6/201 (2%)
Query: 49  EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLA 108
           E + ++  DVT ++++  +V+ A++ +GK+D + NNAG        ++D  + + + ++ 
Sbjct: 57  ERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQ 116
Query: 109 VNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGSPAYTVSKYGIIALVKILA 166
            N T  F   K    VM  Q+ G I+       + A   I   A+  +K G+++L K +A
Sbjct: 117 GNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVA 176
Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
            E  +YG+  N V P G + G     +I  A     L E     G+    E IA    +L
Sbjct: 177 YEEAEYGITANMVCP-GDIIGEMKEATIQEA---RQLKEHNTPIGRSGTGEDIARTISFL 232
Query: 227 ATDEASDVTGLNLVVDGGFSV 247
             D++  +TG  + V G   V
Sbjct: 233 CEDDSDMITGTIIEVTGAVDV 253

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/150 (31%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPK-SDLDRVLAVNTTGG 114
           CD++  D I       +A +G+ D++ NNAG+    F   L T K ++ D ++AVN    
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV--GWFGGPLHTMKPAEWDALIAVNLKAP 142
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           +L  +  A  MI   +G I+  +S   +       AYT SK+G+  L+   A ELRQ+ +
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQV 202
Query: 175 RVNCVSP--------YGLVSGISSRNSINP 196
           RV+ V+P         GL +  S+  +I P
Sbjct: 203 RVSLVAPGSVRTEFGVGLSAKKSALGAIEP 232

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 114/236 (48%), Gaps = 25/236 (10%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           K F   GA+V I   + ++  A   ++G     I  D  +  E+  L +   A+ G++D+
Sbjct: 47  KRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106
Query: 81  MYNNAGIVDRGFASVL---DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
           ++ NAG       S L   +  +   D     N  G  L     A  ++ +    +L  +
Sbjct: 107 LFVNAG-----GGSXLPLGEVTEEQYDDTFDRNVKG-VLFTVQKALPLLARGSSVVLTGS 160
Query: 138 SACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYGLRVNCVSP-----YGLVSGIS 189
           +A +     G+PA++V   SK  + +  +    +L+  G+R+N +SP      GLV  ++
Sbjct: 161 TAGS----TGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVE-LA 215
Query: 190 SRNSINP-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            ++ +    +L A  +++    G+V  AE +A AAL+LA+D++S VTG  L VDGG
Sbjct: 216 GKDPVQQQGLLNALAAQVPX--GRVGRAEEVAAAALFLASDDSSFVTGAELFVDGG 269

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALAC--KLGEDVCYIHC 56
           LEGKV                     G KV++  A+  ++  + +A   K G D   +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           +V   ++I  + + AV  +GKLDI+ +N+G+V   F  V D    + DRV  +NT G F 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLR 175
            A+ A + +  +  G ++   S   +   +   A Y+ SK  I    + +A ++    + 
Sbjct: 145 VAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202
Query: 176 VNCVSPYGLVSGI----------SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           VN V+P G+ + +          +  N  N  + E    +   LR   L  + IA    +
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPID-IARVVCF 261
Query: 226 LATDEASDVTGLNLVVDGG 244
           LA+++   VTG  + +DGG
Sbjct: 262 LASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 20/259 (7%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI--ADVQDNLGQALAC--KLGEDVCYIHC 56
           LEGKV                     G KV++  A+  ++  + +A   K G D   +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           +V   ++I  + + AV  +GKLDI+ +N+G+V   F  V D    + DRV  +NT G F 
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVFTINTRGQFF 144
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLR 175
            A+ A + +  +  G ++   S   +   +   A Y+ SK  I    + +A ++    + 
Sbjct: 145 VAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202
Query: 176 VNCVSPYGLVSGI----------SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           VN V+P G+ + +          +  N  N  + E    +   LR   L  + IA    +
Sbjct: 203 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPID-IARVVCF 261
Query: 226 LATDEASDVTGLNLVVDGG 244
           LA+++   VTG  + +DGG
Sbjct: 262 LASNDGGWVTGKVIGIDGG 280

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 98/197 (49%), Gaps = 8/197 (4%)
Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           +  DVT  D +           G ++++ +NAG+    F  ++   +   ++V+  N TG
Sbjct: 78  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 135
Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQY 172
            F  A+ A+R M     G ++F AS  + + GIG+ A Y  SK G+I + + +A EL + 
Sbjct: 136 AFRVAQRASRSMQRNKFGRMIFIAS-VSGLWGIGNQANYAASKAGVIGMARSIARELSKA 194
Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
            +  N V+P G +    +R +++  I +  L  +   R  V     +A    +LA+++AS
Sbjct: 195 NVTANVVAP-GYIDTDMTR-ALDERIQQGALQFIPAKR--VGTPAEVAGVVSFLASEDAS 250
Query: 233 DVTGLNLVVDGGFSVAN 249
            ++G  + VDGG  + +
Sbjct: 251 YISGAVIPVDGGMGMGH 267

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 106/240 (44%), Gaps = 22/240 (9%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F   GA+V + D      + L    G +   +  DV S  +     +  +A +GK+D + 
Sbjct: 25  FVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLI 84
Query: 83  NNAGIVDRGFASVLDTPKSDLD----RVLAVNTTGGFLGAKHAARVMIP---QHKGCILF 135
            NAGI D   A + D P+  +D     +  VN  G      HA +  +P     +G ++F
Sbjct: 85  PNAGIWDYSTA-LADLPEDKIDAAFDDIFHVNVKGYI----HAVKACLPALVSSRGSVVF 139
Query: 136 TASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS------ 189
           T S        G P YT +K+ ++ LV+ +A EL  + +RVN V+P G+ + +       
Sbjct: 140 TISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLG 198
Query: 190 -SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS-DVTGLNLVVDGGFSV 247
            S  SI+   L   L  +  + G++   E    A ++ AT   S   TG  L  DGG  V
Sbjct: 199 LSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFFATRGDSLPATGALLNYDGGMGV 257

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 5/201 (2%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G D      DV   +      +  +A +GK+D++ NNAGI     A+ +   K D D V+
Sbjct: 74  GRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRD--ATFMKMTKGDWDAVM 131
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
             +    F   K     M+ +  G I+   S        G   Y  +K GI    K LA 
Sbjct: 132 RTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLAL 191
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           E  + G+ VN VSP  L + +    ++   +LEA +     + G++   + +A    +L 
Sbjct: 192 ETAKRGITVNTVSPGYLATAMV--EAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAFLC 248
Query: 228 TDEASDVTGLNLVVDGGFSVA 248
           +D+A  VTG +L ++GG  ++
Sbjct: 249 SDDAGFVTGADLAINGGMHMS 269

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 32/239 (13%)
Query: 23  FHENGAKVVI-ADVQDNLGQAL--ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           F + GA+VVI    ++ L +A     +    +  +  DV + D+I   ++    K+G++D
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRNTDDIQKXIEQIDEKFGRID 85
Query: 80  IMYNNAGIVDRGFASVLDTPKSDL-----DRVLAVNTTGGFLGAKHAARVMIPQH-KGCI 133
           I+ NNA       A     P  DL     + V+ +   G F  ++   +  I +  KG I
Sbjct: 86  ILINNA-------AGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNI 138
Query: 134 LFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL-RQYGLRVNCVSPYGLVSGISSRN 192
           +   +     AG G      +K G++A  K LA E  R+YG+RVN ++P G +      +
Sbjct: 139 INXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRKYGIRVNAIAP-GPIERTGGAD 197
Query: 193 SINPAILEAFLSEMGNLR-------GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            +       ++SE    R       G++   E IA  A YL +DEA+ + G     DGG
Sbjct: 198 KL-------WISEEXAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYINGTCXTXDGG 249

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 22/207 (10%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +L H  G +V +    +   QALA +L E    +  DV  E +    V      +G+L  
Sbjct: 23  RLLHAKGYRVGLMARDEKRLQALAAEL-EGALPLPGDVREEGDWARAVAAMEEAFGELSA 81
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAG+       V +    +   VL  N TG FLG +HA   ++ +  G I+   S  
Sbjct: 82  LVNNAGVGV--MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLA 139
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
            +    G  AY  SK+G++ L      +LR+  +RV  V P  + +G +           
Sbjct: 140 GKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFA----------- 188
Query: 201 AFLSEMGNLRGQV--LNAEGIANAALY 225
                 GN  GQ   L  E +A A L+
Sbjct: 189 ------GNTPGQAWKLKPEDVAQAVLF 209

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 14/226 (6%)
Query: 23  FHENGAKVV-IADVQDNLGQAL-ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
            H  GA+VV ++  Q +L   +  C   E VC    D  + +        A+   G +D+
Sbjct: 27  LHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATER-------ALGSVGPVDL 79
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASA 139
           + NNA +        L+  K   DR   VN       ++  AR +I +   G I+  +S 
Sbjct: 80  LVNNAAVAL--LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ 137
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
            ++ A      Y  +K  +  L K++A EL  + +RVN V+P  +++ +      +P   
Sbjct: 138 XSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKA 197
Query: 200 EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           +  L+ +    G+    E + NA L+L +D +   TG  L V+GGF
Sbjct: 198 KTMLNRIP--LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGGF 241

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 21/206 (10%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G  + Y   D+T+EDE    VD   A +G+L  + + AG  +     +         R +
Sbjct: 62  GGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSEN-IGPITQVDSEAWRRTV 120
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
            +N  G     KHAAR M+    G  +  +S           AY V+K  +  L+++ A 
Sbjct: 121 DLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN---------LRGQVLNAEG 218
           EL    +RVN + P GL+     R  +  AI E+  +E+ +          +G+V   E 
Sbjct: 181 ELGASWVRVNSIRP-GLI-----RTDLVAAITES--AELSSDYAMCTPLPRQGEV---ED 229
Query: 219 IANAALYLATDEASDVTGLNLVVDGG 244
           +AN A++L +D AS VTG  + VDGG
Sbjct: 230 VANMAMFLLSDAASFVTGQVINVDGG 255

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           +  DVT  D +           G ++++ +NAG+    F  ++   +   ++V+  N TG
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTG 115
Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQY 172
            F  A+ A+R M     G ++F  S  + + GIG+ A Y  SK G+I + + +A EL + 
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGS-VSGLWGIGNQANYAASKAGVIGMARSIARELSKA 174
Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
            +  N V+P G +    +R +++  I +  L  +   R  V     +A    +LA+++AS
Sbjct: 175 NVTANVVAP-GYIDTDMTR-ALDERIQQGALQFIPAKR--VGTPAEVAGVVSFLASEDAS 230
Query: 233 DVTGLNLVVDGGFSVAN 249
            ++G  + VDGG  + +
Sbjct: 231 YISGAVIPVDGGMGMGH 247

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 23  FHENGAKVVIADVQDNL-----GQALACKLGEDVCYIHCD-VTSEDEIT---NLVDTAVA 73
           F E GA VV+ D+  +      G + A K+ E++       V + D +     LV TA+ 
Sbjct: 29  FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALD 88
Query: 74  KYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC 132
            +G++D++ NNAGI+ DR F+ + D    D D +  V+  G F   + A      Q+ G 
Sbjct: 89  TFGRIDVVVNNAGILRDRSFSRISD---EDWDIIQRVHLRGSFQVTRAAWDHXKKQNYGR 145
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           I+ TASA       G   Y+ +K G++ L   L  E R+  +  N ++P
Sbjct: 146 IIXTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP 194

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCD 57
           L+GK+                 + + GA +V  D+   L   G A     G +     CD
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT ED I  +V    ++ G +DI+ NNAGI+ R    +++   +   +V+ ++    F+ 
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGIIRR--VPMIEMTAAQFRQVIDIDLNAPFIV 149
Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           +K     MI +  G I+   S  +E+      AY  +K G+  L K +A+E  +  ++ N
Sbjct: 150 SKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCN 209
Query: 178 CVSPYGLVSGIS----------SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
            + P  + +  +          SR+  +  I+    +       +   AE +   A++LA
Sbjct: 210 GIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPA------ARWGEAEDLMGPAVFLA 263
Query: 228 TDEASDVTGLNLVVDGG 244
           +D ++ V G  L VDGG
Sbjct: 264 SDASNFVNGHILYVDGG 280

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 19/213 (8%)
Query: 40  GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP 99
           GQA+A         +  DV+ E +  N V   V K+G LDI+  NAGI +  +A + D  
Sbjct: 77  GQAIA---------LEADVSDELQXRNAVRDLVLKFGHLDIVVANAGI-NGVWAPIDDLK 126
Query: 100 KSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI- 158
             + D  +AVN  G FL   H     + Q  G  +   S+        +P  T       
Sbjct: 127 PFEWDETIAVNLRGTFL-TLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKA 185
Query: 159 --IALVKILAAELRQYGLRVNCVSPYGLVSGISS----RNSINPAI-LEAFLSEMGNLRG 211
             +A+V+ LA EL ++ +RVN V P  + + IS     R+    AI +E    ++    G
Sbjct: 186 AQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDG 245
Query: 212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           Q   +E +A    +L ++ A  VTG  + +DGG
Sbjct: 246 QPGRSEDVAELIRFLVSERARHVTGSPVWIDGG 278

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 15/206 (7%)
Query: 49  EDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLA 108
           E++ +I  D+T + +ITN++D  + K    D ++ NAGI+ +G  S+ D     + +VL 
Sbjct: 44  ENLKFIKADLTKQQDITNVLD--IIKNVSFDGIFLNAGILIKG--SIFDIDIESIKKVLD 99
Query: 109 VNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
           +N        K     +  +    I+F  S    IA   S AYT+SK  I    K LA +
Sbjct: 100 LNVWSSIYFIKGLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALD 157
Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINP-------AILEAFLSEMGNLR-GQVLNAEGIA 220
           L +Y +RVN V P G V     RN I         +  EA   E       ++   + IA
Sbjct: 158 LAKYQIRVNTVCP-GTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIA 216
Query: 221 NAALYLATDEASDVTGLNLVVDGGFS 246
              ++L +D++   TG  + +DGG++
Sbjct: 217 ELVIFLLSDKSKFXTGGLIPIDGGYT 242

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 17/221 (7%)
Query: 28  AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI 87
           A  V+  +++  GQALA         +  DV  E E+    +T  A+ G+L  + NNAG+
Sbjct: 63  ADEVVRQIREAGGQALA---------VQADVAKEREVLAXFETVDAQLGRLSALVNNAGV 113
Query: 88  VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG 147
           VD+    V       L R   +N  G FL A+ A +    ++ G      +  +  A +G
Sbjct: 114 VDQ-TTRVDGITLERLQRXFEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAARLG 172
Query: 148 SPA----YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL 203
           SP     Y  +K  I      LA E+   G+RVN V P  + + I +   + P       
Sbjct: 173 SPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAVRPGIIETDIHASGGL-PNRARDVA 231
Query: 204 SEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            ++   R     A  +A A ++L  D+AS  TG  L V GG
Sbjct: 232 PQVPXQRAG--TAREVAEAIVWLLGDQASYTTGALLDVTGG 270

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           KLG     I  D++   E+  L D AV+ +G LD + +N+G+    +   L+  +   D+
Sbjct: 68  KLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDK 125
Query: 106 VLAVNTTGGFL----GAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIA 160
           V  +NT G F     G KH  R       G I+ T+S    + GI + A Y  SK  +  
Sbjct: 126 VFNLNTRGQFFVAQQGLKHCRR------GGRIILTSSIAAVMTGIPNHALYAGSKAAVEG 179
Query: 161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
             +  A +    G+ VNC++P G+ + +   NS + A
Sbjct: 180 FCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYA 216

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 9/197 (4%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++   +I  L   A  ++G +DI+ NNAGI  +  A V   P    D+++A+N +  F
Sbjct: 58  ADLSDVAQIEALFALAEREFGGVDILVNNAGI--QHVAPVEQFPLESWDKIIALNLSAVF 115
Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            G + A   M  ++ G I+  AS    +   G  AY  +K+G++ L K++  E     + 
Sbjct: 116 HGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVT 175
Query: 176 VNCVSPYGLVSGISSR-------NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
            N + P  +++ +  +       N  +P   +  L          +  E +    L+L +
Sbjct: 176 CNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCS 235
Query: 229 DEASDVTGLNLVVDGGF 245
           +  S V G    VDGG+
Sbjct: 236 EAGSQVRGAAWNVDGGW 252

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 99/231 (42%), Gaps = 17/231 (7%)
Query: 22  LFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +F   GA V +A        ++  +LGE    +V  +  DV+      +   T V  +G 
Sbjct: 60  VFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119
Query: 78  LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
           LD++  NAGI        + TP+  L  VL VN  G     +     +    +G ++ T+
Sbjct: 120 LDVVCANAGIFPEARLDTM-TPE-QLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTS 177
Query: 138 SACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYG-LVSGISSRNSIN 195
           S    + G  G   Y  SK   +  ++  A EL   G+ VN + P   L  G+       
Sbjct: 178 SITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG--- 234
Query: 196 PAILEAFLSEMGN--LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
               E ++S M      G + +   I + A +LATDEA  +TG  +VVDGG
Sbjct: 235 ----EEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG 281

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 52  CYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVN 110
            Y+  ++  + +  + V   +A +G+LD + NNAG+ D  G  +  D   + L+R L   
Sbjct: 58  TYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLI-- 115
Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAEL 169
               +    H     +   +G I+   S+ T + G G+ + Y  SK   +AL +  A  L
Sbjct: 116 ---HYYAMAHYCVPHLKATRGAIV-NISSKTAVTGQGNTSGYCASKGAQLALTREWAVAL 171
Query: 170 RQYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMG---NLRGQVLNAEGIANA 222
           R++G+RVN V P  +++ +  RN I    +P   EA L+E+     L  +    + IA+ 
Sbjct: 172 REHGVRVNAVIPAEVMTPL-YRNWIATFEDP---EAKLAEIAAKVPLGRRFTTPDEIADT 227
Query: 223 ALYLATDEASDVTGLNLVVDGGFS 246
           A++L +  AS  TG  L VDGG++
Sbjct: 228 AVFLLSPRASHTTGEWLFVDGGYT 251

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 25  ENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
             GA VV+AD+     +A+A ++   G     +  DV+  +    + D  +A++G +D +
Sbjct: 31  REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYL 90
Query: 82  YNNAGIVDRGFASVLDTPKSD-LDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
            NNA I        L T   +   + ++VN  G     +   + M  +  G I+  +S  
Sbjct: 91  VNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTA 150
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
              A + S  Y ++K GI  L + L+ EL    +R+N ++P G +   ++R +    +++
Sbjct: 151 ---AWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAP-GPIDTEANRTTTPKEMVD 206
Query: 201 AF-----LSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
                  LS MG         + +    L+L +DEAS +TG    VDGG
Sbjct: 207 DIVKGLPLSRMG-------TPDDLVGMCLFLLSDEASWITGQIFNVDGG 248

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 9/189 (4%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D T+ D    LV++ + ++G L+++ NNAGI     A  +     + D V+  N    F 
Sbjct: 88  DATAVDA---LVESTLKEFGALNVLVNNAGITQDQLA--MRMKDDEWDAVIDTNLKAVFR 142
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            ++   R M+    G I+   S        G   Y  +K G+  + + LA E+   G+ V
Sbjct: 143 LSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITV 202
Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           NCV+P G +    ++    P   +  L     L G++ + E IA+A  +LA+ +A  +TG
Sbjct: 203 NCVAP-GFIDTDMTKGL--PQEQQTALKTQIPL-GRLGSPEDIAHAVAFLASPQAGYITG 258
Query: 237 LNLVVDGGF 245
             L V+GG 
Sbjct: 259 TTLHVNGGM 267

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 61.2 bits (147), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 22  LFHENGAKVVIADVQDNLGQALACKLGEDVCYIH---------CDVTSEDEITNLVDTAV 72
           LF E GAKVV+ D+        A +   D+              D  S  +   +++TA+
Sbjct: 38  LFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97
Query: 73  AKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG 131
             +G++DI+ NNAGI+ DR   S++ T + D + V  V+  G F   + A   M  Q+ G
Sbjct: 98  KAFGRVDILVNNAGILRDR---SLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG 154
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            I+ T+S        G   YT +K G+I L   +A E  +  +  N + P
Sbjct: 155 RIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP 204

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDR 105
           LG D      +V   D      D   A+ G++D++ NNAGI  D  F  +    + D   
Sbjct: 61  LGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMT---REDWQA 117
Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           V+  N T  F   K     M+ +  G I+  +S   +    G   Y+ +K GI      L
Sbjct: 118 VIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSL 177
Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           A E+   G+ VN VSP G + G     +I P +LE  ++ +   R  + + + I +   +
Sbjct: 178 AQEVATKGVTVNTVSP-GYI-GTDMVKAIRPDVLEKIVATIPVRR--LGSPDEIGSIVAW 233
Query: 226 LATDEASDVTGLNLVVDGGF 245
           LA++E+   TG +  ++GG 
Sbjct: 234 LASEESGFSTGADFSLNGGL 253

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G DV    CDVTS DE+   V  AV ++G + I+ N+AG    G     D   +    VL
Sbjct: 72  GHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAG--RNGGGETADLDDALWADVL 129
Query: 108 AVNTTGGFLGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
             N TG F   +   R   M     G I+  AS   +   + +  YT SK+G++   K +
Sbjct: 130 DTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSV 189
Query: 166 AAELRQYGLRVNCVSPYGLVSGISSR----NSINPAILEAFLSEMGNLR---GQVLNAEG 218
             EL + G+ VN V P  + + ++ R     + +  + E  + E  N +   G+    E 
Sbjct: 190 GFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEE 249
Query: 219 IANAALYLATDEASDVTGLNLVVDGGF 245
           +A    YL TD A+ +T   L V GG 
Sbjct: 250 VAGLVGYLVTDAAASITAQALNVCGGL 276

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD- 79
           +  H +G  VVIAD+    G+ALA +LG    ++  +VTSED +   ++ A  + G+L  
Sbjct: 48  RRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIE-AANQLGRLRY 106
Query: 80  --IMYNNAGIVDR------------GFASVLD---TPKSDLDRVLAVNTTGGFLGAKHAA 122
             + +   G+  R            GF   +D       ++ R++A +          AA
Sbjct: 107 AVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIA--------AA 158
Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
                  +G ++ TAS       IG  AY  +K G+I L    A +L   G+RVN ++P
Sbjct: 159 EPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAP 217

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFT 136
           ++D++ NNAGI+ R  A  +   +     VL VN    ++ ++     M+    G I+  
Sbjct: 106 RVDVLVNNAGIIARAPAEEVSLGR--WREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTI 163
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
           AS  +   G    AY  SK+ ++ L + LA+E    G+ VN ++P  +V       + N 
Sbjct: 164 ASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVV-------TANT 216
Query: 197 AILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           A L A       +      G+    E +   A++LA+D AS V G  L VDGG+
Sbjct: 217 AALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGGW 270

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 86/193 (44%), Gaps = 38/193 (19%)
Query: 27  GAKVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           GAKV + D   NL   + CK         +   +I CDV  + ++ +     V  +G+LD
Sbjct: 31  GAKVALVDW--NLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLD 88
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVN----TTGGFLGAKHAARVMIPQHKGCILF 135
           I+ NNAG+            + + ++ L +N     +G +LG  + ++      +G I+ 
Sbjct: 89  ILVNNAGV----------NNEKNWEKTLQINLVSVISGTYLGLDYMSKQ--NGGEGGIII 136
Query: 136 TASACTEIAGIG-SPAYTVSKYGIIALVK--ILAAELRQYGLRVNCVSPYGLVSGISSRN 192
             S+   +  +   P Y  SK+GI+   +   LAA L   G+R+N + P G V       
Sbjct: 137 NMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP-GFV------- 188
Query: 193 SINPAILEAFLSE 205
             N AILE+   E
Sbjct: 189 --NTAILESIEKE 199

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG +  G  + L   +  LD V+  N TG F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAEL-ADELWLD-VVETNLTGVF 139
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 200 ITVNAVCP 207

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG +  G  + L   +  LD V+  N TG F
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAEL-ADELWLD-VVETNLTGVF 135
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 136 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 195
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 196 ITVNAVCP 203

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 100/229 (43%), Gaps = 14/229 (6%)
Query: 27  GAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           GA+ VIA    DV     + ++ + G  V  I CDV   D + N V   +   G  +I+ 
Sbjct: 50  GAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVI 109
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLA-VNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
           NNA      F S  +    +  + +  +   G         + +I   KG    + +   
Sbjct: 110 NNAA---GNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY 166
Query: 142 EIAGIGSPAYTVS-KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
              G G    + S K G+ A+ K LAAE  +YG+R N + P G +    + + ++P    
Sbjct: 167 AETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQP-GPIKTKGAFSRLDPT--G 223
Query: 201 AFLSEM-GNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            F  EM G +  G++   E +AN A +L +D AS + G  +  DGG  V
Sbjct: 224 TFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV 272

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 14/236 (5%)
Query: 22  LFHENGAKVVIA-----DVQDNLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKY 75
           +F + GA+V I       +++   Q L   +  E +  +  DVT      ++++T +AK+
Sbjct: 45  IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104
Query: 76  GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILF 135
           GK+DI+ NNAG       +  D P     +   +N     +      +  + + KG I+ 
Sbjct: 105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ-AVIEMTQKTKEHLIKTKGEIVN 163
Query: 136 TAS-ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI 194
            +S      A  G P Y  +K  +    +  A +L Q+G+RVN VSP  + +G      +
Sbjct: 164 VSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGL 223
Query: 195 NPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDE-ASDVTGLNLVVDGG 244
                +   S +G+ +     G     E IAN  ++LA    +S + G ++V DGG
Sbjct: 224 PETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG 279

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 13/186 (6%)
Query: 26  NGAKVVIADV-QDNLGQALAC----KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
            G KV IAD+ QD++ +ALA       G +V  +  DV S +      D   A++G + I
Sbjct: 31  QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSI 90
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG-----AKHAARVMIPQHKGCILF 135
           + NNAG+    F  + ++   D D +L VN  G   G      +   RV   + KG  + 
Sbjct: 91  LCNNAGV--NLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVV 148
Query: 136 TASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI 194
             ++       GSP  Y  +K+ +  L + L   L +Y + V+ + P  + S I + + I
Sbjct: 149 NTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI 208
Query: 195 NPAILE 200
            P  L+
Sbjct: 209 RPDALK 214

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 13/198 (6%)
Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAV 109
           V  +  DV+   +   L   AV ++G +D++  NAG+  D   A++  TP+  L+ + AV
Sbjct: 62  VIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATM--TPEQ-LNGIFAV 118
Query: 110 NTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAE 168
           N  G F   +     +I    G ++ T+S    I G  G   Y  +K   +  ++  A E
Sbjct: 119 NVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIE 178
Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIANAALYL 226
           L  + + VN + P  +++     N       E +++ M      G +   E I + A +L
Sbjct: 179 LAPHKITVNAIMPGNIMTEGLLENG------EEYIASMARSIPAGALGTPEDIGHLAAFL 232
Query: 227 ATDEASDVTGLNLVVDGG 244
           AT EA  +TG  + VDGG
Sbjct: 233 ATKEAGYITGQAIAVDGG 250

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 107/240 (44%), Gaps = 24/240 (10%)
Query: 23  FHENGAKVVIADVQ-DNLGQA---LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL 78
           F + GA +V+   Q D L +A   L  K G  V  +  DV + + +  +V++  + +G  
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86
Query: 79  DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK----GCIL 134
           DI+ NNAG       ++++           ++     + A   AR ++P  +    G I+
Sbjct: 87  DILVNNAGTGSN--ETIMEAADEKWQFYWELHV----MAAVRLARGLVPGMRARGGGAII 140
Query: 135 FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV---SGISSR 191
             AS C        P Y V+K  ++   K LA E+ +  +RVNC++P GL+     I + 
Sbjct: 141 HNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP-GLILTPDWIKTA 199
Query: 192 NSI---NPAILEAFLSEMGNLRGQV---LNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             +   N    + +L  + +    +    + E +AN  ++L ++ A+   G    VDGG 
Sbjct: 200 KELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 139
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 200 ITVNAVCP 207

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 21/219 (9%)
Query: 28  AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGI 87
           A+ V+++++   G+A+A         I  D    + I   +   V   G LDI+ N+AGI
Sbjct: 69  AQAVVSEIEQAGGRAVA---------IRADNRDAEAIEQAIRETVEALGGLDILVNSAGI 119
Query: 88  VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGI 146
                A + +T  +D D V AVN    F+  + A+R +     G I+   S   E +   
Sbjct: 120 WHS--APLEETTVADFDEVXAVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWP 175
Query: 147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM 206
           G   Y+ SK  +  L K LA +L   G+ VN V P       S+    NPA  +   ++ 
Sbjct: 176 GISLYSASKAALAGLTKGLARDLGPRGITVNIVHPG------STDTDXNPADGDHAEAQR 229
Query: 207 GNL-RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
             +  G     + IA    +LA  +   VTG +L +DGG
Sbjct: 230 ERIATGSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG 268

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 62  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 119
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 120 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 179
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 180 ITVNAVCP 187

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 139
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 200 ITVNAVCP 207

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           I  D++   ++  L    V +YG +D + NNAG+    F ++ D  + D D  +  N  G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNLKG 120
Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            F   +    +M  QH G I F  S     A   S  Y +SK+G   LV+ +    R+  
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 180
Query: 174 LRVNCVSP 181
           +R+  V P
Sbjct: 181 VRITDVQP 188

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 135
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 136 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 195
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 196 ITVNAVCP 203

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 139
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 200 ITVNAVCP 207

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV S  EI  LV   V +YG +D++ NNAG    G  + L   +  LD V+  N TG F
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAEL-ADELWLD-VVETNLTGVF 139
Query: 116 LGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
              K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G
Sbjct: 140 RVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTG 199
Query: 174 LRVNCVSP 181
           + VN V P
Sbjct: 200 ITVNAVCP 207

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 19/226 (8%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           F E G KV   D+ +      A K   ++ Y H DV     +   V+ A+ K  ++D++ 
Sbjct: 22  FLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           NNA    +G  S L     + D +L+V     +  ++     +I ++KG I+  AS    
Sbjct: 81  NNACRGSKGILSSL--LYEEFDYILSVGLKAPYELSRLCRDELI-KNKGRIINIASTRAF 137
Query: 143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF 202
            +   S AY  +K GI+AL   LA  L    L VNC++P            IN    + F
Sbjct: 138 QSEPDSEAYASAKGGIVALTHALAMSLGPDVL-VNCIAP----------GWINVTEQQEF 186
Query: 203 LSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
             E       G+V   + I+N  L+L   +   +TG  ++VDGG S
Sbjct: 187 TQEDCAAIPAGKVGTPKDISNMVLFLCQQDF--ITGETIIVDGGMS 230

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 36/155 (23%)
Query: 40  GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP 99
           G+AL C +         DV  E +I+  V+ A+ K+G +DI+ NNA  +     + LDTP
Sbjct: 101 GKALPCIV---------DVRDEQQISAAVEKAIKKFGGIDILVNNASAIS--LTNTLDTP 149
Query: 100 KSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILF-TASACTEIAGIGSP--------- 149
              LD ++ VNT G +L +           K CI +   S    I  I  P         
Sbjct: 150 TKRLDLMMNVNTRGTYLAS-----------KACIPYLKKSKVAHILNISPPLNLNPVWFK 198
Query: 150 ---AYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
              AYT++KYG+   V  +A E +   + VN + P
Sbjct: 199 QHCAYTIAKYGMSMYVLGMAEEFKGE-IAVNALWP 232

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD-IMYNNAGIVDRGFASVLDTPKSDLD 104
           KLG     I  D+T+  E+   +  A  K+G++  +++   G++ R   ++ +  ++   
Sbjct: 55  KLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIAR--KTIAEMDEAFWH 112
Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
           +VL VN T  FL AK A   M  +    + F++ A  +  G G+ AY  SK  ++   + 
Sbjct: 113 QVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRG 171
Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
           LA E+    +RVN V P G++S         P + E         R    ++E +A    
Sbjct: 172 LAKEVGPK-IRVNAVCP-GMISTTFHDTFTKPEVRERVAGATSLKREG--SSEDVAGLVA 227
Query: 225 YLATDEASDVTGLNLVVDGG 244
           +LA+D+A+ VTG    ++GG
Sbjct: 228 FLASDDAAYVTGACYDINGG 247

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +   + GA V+  D++   G+  A +LG  V + + DVT+E + T  +  A  ++G +  
Sbjct: 25  RXLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84
Query: 81  MYNNAG------IVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI---PQ--- 128
           + N AG      I+ R     LD+      R +AVN  G F   + AA V     P    
Sbjct: 85  LVNCAGTAPGEKILGRSGPHALDS----FARTVAVNLIGTFNXIRLAAEVXSQGEPDADG 140
Query: 129 HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            +G I+ TAS       IG  AY  SK G+ AL    A EL ++G+RV  ++P
Sbjct: 141 ERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAP 193

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 104/240 (43%), Gaps = 24/240 (10%)
Query: 23  FHENGAKVVIADVQ-DNLGQA---LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL 78
           F + GA +V+   Q D L +A   L  K G  V  +  DV + + +  +V++  + +G  
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGA 86
Query: 79  DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK----GCIL 134
           DI+ NNAG          +T     D           + A   AR ++P  +    G I+
Sbjct: 87  DILVNNAGTGSN------ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAII 140
Query: 135 FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV---SGISSR 191
             AS C        P Y V+K  ++   K LA E+ +  +RVNC++P GL+     I + 
Sbjct: 141 HNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP-GLILTPDWIKTA 199
Query: 192 NSI---NPAILEAFLSEMGNLRGQV---LNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             +   N    + +L  + +    +    + E +AN  ++L ++ A+   G    VDGG 
Sbjct: 200 KELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFLCSERATYSVGSAYFVDGGM 259

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 12/253 (4%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGK                + +   GA V IAD+     +  A ++G     +  DVT 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQXDVTR 65
Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG-FLGAK 119
           +D I   +   V   G LDI+ NNA + D   A +++  +   +++ A+N  G  F    
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAALFD--LAPIVEITRESYEKLFAINVAGTLFTLQA 123
Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A + +     G I+  AS            Y  +K  +I+L +    +L ++ + VN +
Sbjct: 124 AARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAI 183
Query: 180 SPYGLVSG--------ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           +P G+V G        + +R    P   +  L       G+   AE +   A++LA+ E+
Sbjct: 184 AP-GVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLASAES 242
Query: 232 SDVTGLNLVVDGG 244
             +      VDGG
Sbjct: 243 DYIVSQTYNVDGG 255

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 58.2 bits (139), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 19/234 (8%)
Query: 26  NGAKVVIADVQDNLGQA-----LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           +G  + +AD+     QA     L     +   ++  DVT +    + +D A  K G  D+
Sbjct: 25  DGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDV 84
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAGI       +L+  + DL ++ +VN    F G + A+R       G      +A 
Sbjct: 85  LVNNAGIAQ--IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKF--DELGVKGKIINAA 140
Query: 141 TEIAGIGSP---AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR-----N 192
           +  A  G P   AY+ +K+ +  L +  A EL   G  VN  +P  + +G+  +     +
Sbjct: 141 SIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELS 200
Query: 193 SIN-PAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            IN   I E F     ++  G+    E +A    +LA++ ++ VTG  ++VDGG
Sbjct: 201 KINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG 254

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 13/183 (7%)
Query: 73  AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC 132
           A  G+LDI+ NNAG++ RG   + +T  +D    L VN    F   + A  +      G 
Sbjct: 90  AGLGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNVEAPFRICRAAIPLXAAAGGGA 147
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY-----GLVSG 187
           I+  AS      G G   Y ++K  + +L +    +    G+R+N V P       L +G
Sbjct: 148 IVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRINAVCPNEVNTPXLRTG 207
Query: 188 ISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
            + R   +P   +  ++E+G     G++   E IA+  L+LA+D A  + G  + V+GG 
Sbjct: 208 FAKRG-FDP---DRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGGK 263
Query: 246 SVA 248
           +VA
Sbjct: 264 AVA 266

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 22/230 (9%)
Query: 27  GAKVVIADVQDNLGQALA------CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           GA+V++ D++  L   LA       + G D   +  DVT E  I        A+   +DI
Sbjct: 33  GARVILNDIRATL---LAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDI 89
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAGI  R    +++    +  +V+  N T  FL ++ AA+ MI ++ G  +    + 
Sbjct: 90  LINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL 147
Query: 141 TEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL 199
           T  A   + A YT +K GI  L   +AAE  Q+ ++ N + P  +++       +N A++
Sbjct: 148 TSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILT------DMNTALI 201
Query: 200 E--AFLSEM--GNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
           E   F S +       +    E +   A++L++  +  + G  + VDGG+
Sbjct: 202 EDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYVDGGW 251

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 13/137 (9%)
Query: 41  QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPK 100
           Q  A ++G+D   +  DVT  D +  L    V K+G++D+++NNAG    G  ++   P 
Sbjct: 66  QETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGT---GAPAI---PX 119
Query: 101 SDL-----DRVLAVNTTGGFLGAKHAARVMIPQHK--GCILFTASACTEIAGIGSPAYTV 153
            DL      +V+  N TG FL  + A RV   Q    G I+   S         S  YT 
Sbjct: 120 EDLTFAQWKQVVDTNLTGPFLCTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTA 179
Query: 154 SKYGIIALVKILAAELR 170
           +K+ I  L K  + + R
Sbjct: 180 TKHAITGLTKSTSLDGR 196

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 99/226 (43%), Gaps = 19/226 (8%)
Query: 24  HENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN 83
           +   A  V+A + ++ G+A+A         I  DV +  +I         ++G+LD + N
Sbjct: 60  NREAADAVVAAITESGGEAVA---------IPGDVGNAADIAAXFSAVDRQFGRLDGLVN 110
Query: 84  NAGIVDRGFASVLDTPKSD-LDRVLAVNTTGGFLGAKHAAR--VMIPQHKGCILFTASAC 140
           NAGIVD  +   +D    + ++R L VN TG  L A  A R    +   +G  +   S+ 
Sbjct: 111 NAGIVD--YPQRVDEXSVERIERXLRVNVTGSILCAAEAVRRXSRLYSGQGGAIVNVSSX 168
Query: 141 TEIAGIGSP--AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI 198
             I G  +    Y  SK  I      LA E+   G+RVN V P  + + + +   +    
Sbjct: 169 AAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRA 228
Query: 199 LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
            E   S      G     E +A+A LYL +  AS VTG  L V GG
Sbjct: 229 REXAPSVPXQRAGX---PEEVADAILYLLSPSASYVTGSILNVSGG 271

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 98/229 (42%), Gaps = 14/229 (6%)
Query: 27  GAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           GA+ VIA    DV     + ++ + G  V  I CDV   D + N V   +   G  +I+ 
Sbjct: 50  GAQCVIASRKXDVLKATAEQISSQTGNKVHAIQCDVRDPDXVQNTVSELIKVAGHPNIVI 109
Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLA-VNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
           NNA      F S  +    +  + +  +   G         + +I   KG    + +   
Sbjct: 110 NNAA---GNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY 166
Query: 142 EIAGIGSPAYTVS-KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
              G G    + S K G+ A  K LAAE  +YG R N + P G +    + + ++P    
Sbjct: 167 AETGSGFVVPSASAKAGVEAXSKSLAAEWGKYGXRFNVIQP-GPIKTKGAFSRLDPT--G 223
Query: 201 AFLSE-MGNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            F  E +G +  G++   E +AN A +L +D AS + G  +  DGG  V
Sbjct: 224 TFEKEXIGRIPCGRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEV 272

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 24/164 (14%)
Query: 29  KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV 88
           +VV+ D++         + GED+ Y+  DVT E+++   V  A  +   L  + + AG+ 
Sbjct: 28  RVVVLDLR---------REGEDLIYVEGDVTREEDVRRAVARA-QEEAPLFAVVSAAGV- 76
Query: 89  DRGFASVL---DTPK--SDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTA 137
             G A  +   + P       RVL VN  G F   + AA  M          +G I+ TA
Sbjct: 77  --GLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTA 134
Query: 138 SACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           S       IG  AY  SK G++AL    A EL  +G+RV  V+P
Sbjct: 135 SVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAP 178

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 56  CDVTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           CD++S  E   L++T    + GKL+I+ NNAGIV   +    D    D   ++++N    
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFEAA 122
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           +  +  A   +    +G ++F +S    +A      Y  +K  +  L + LA E  +  +
Sbjct: 123 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182
Query: 175 RVNCVSPYGLVSGI--------SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           RVN V P  + + +          + ++N  I    L  MG         + +A    +L
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMG-------EPKELAAMVAFL 235
Query: 227 ATDEASDVTGLNLVVDGGF 245
               AS VTG  + VDGG 
Sbjct: 236 CFPAASYVTGQIIYVDGGL 254

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV+    +  L  TA   +G +D++ NNAGI      ++ +T  +  DRV+AVN  G 
Sbjct: 83  QADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIXP--LTTIAETGDAVFDRVIAVNLKGT 140
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQ 171
           F   + AA+ +  +  G I+   +  T   G+  P+Y +   +K G+ A   +L+ ELR 
Sbjct: 141 FNTLREAAQRL--RVGGRII---NXSTSQVGLLHPSYGIYAAAKAGVEAXTHVLSKELRG 195
Query: 172 YGLRVNCVSP 181
             + VN V+P
Sbjct: 196 RDITVNAVAP 205

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 56  CDVTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           CD++S  E   L++T    + GKL+I+ NNAGIV   +    D    D   ++++N    
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFEAA 121
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           +  +  A   +    +G ++F +S    +A      Y  +K  +  L + LA E  +  +
Sbjct: 122 YHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181
Query: 175 RVNCVSPYGLVSGI--------SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           RVN V P  + + +          + ++N  I    L  MG         + +A    +L
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMG-------EPKELAAMVAFL 234
Query: 227 ATDEASDVTGLNLVVDGGF 245
               AS VTG  + VDGG 
Sbjct: 235 CFPAASYVTGQIIYVDGGL 253

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 110/257 (42%), Gaps = 22/257 (8%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVI---ADVQDNLGQALACKLGEDVCYIHCD 57
           L+GKV               + + + GA V I   +   D   + L    G       C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD------RVLAVNT 111
           ++    +   +      +G +D+   NAG+      +    P+ D+D      ++++V+ 
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGV------TWTQGPEIDVDNYDSWNKIISVDL 145
Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGIIALVKILAAEL 169
            G +  + +  ++     KG ++ T+S   +I  I      Y  +K     L K LA E 
Sbjct: 146 NGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEW 205
Query: 170 RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
             +  RVN +SP  + + I+   S +   ++A   ++  L  + L  E +    LYLA++
Sbjct: 206 APFA-RVNTISPGYIDTDITDFASKD---MKAKWWQLTPLGREGLTQE-LVGGYLYLASN 260
Query: 230 EASDVTGLNLVVDGGFS 246
            ++  TG ++V+DGG++
Sbjct: 261 ASTFTTGSDVVIDGGYT 277

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 56  CDVTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           CD+ S  E   L+ T    + GKL+I+ NNAG+V    A   D  + D + ++  N    
Sbjct: 77  CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAK--DFTEKDYNIIMGTN---- 130
Query: 115 FLGAKHAARVMIP----QHKGCILFTASACTEIAGIGS-PA---YTVSKYGIIALVKILA 166
           F  A H +++  P       G ++F +S    IAG  + P+   Y+ SK  I  + K LA
Sbjct: 131 FEAAYHLSQIAYPLLKASQNGNVIFLSS----IAGFSALPSVSLYSASKGAINQMTKSLA 186
Query: 167 AELRQYGLRVNCVSP----YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
            E  +  +RVN V+P      LV     +N      ++ F+  +    G+    + ++  
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI--VKTPMGRAGKPQEVSAL 244
Query: 223 ALYLATDEASDVTGLNLVVDGGFS 246
             +L    AS +TG  +  DGGF+
Sbjct: 245 IAFLCFPAASYITGQIIWADGGFT 268

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV+   +NL +  A K+G    ++  D
Sbjct: 232 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAET-ASKVGGTALWL--D 288
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT----- 111
           VT++D +  + +     +G K DI+ NNAGI      + +D  +   D VLAVN      
Sbjct: 289 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDAR--WDAVLAVNLLAPLR 346
Query: 112 -TGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAEL 169
            T G +G            +G  +   S+   IAG  G   Y  +K G+I + + LA  L
Sbjct: 347 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 399
Query: 170 RQYGLRVNCVSP 181
              G+ +N V+P
Sbjct: 400 AAKGITINAVAP 411

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 54.7 bits (130), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 13/193 (6%)
Query: 39  LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDT 98
           LG  L    G  V  +  DV     +   V + V   G LDI+ NNAGI+  G   V D 
Sbjct: 47  LGDELTAA-GAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLG--PVEDA 103
Query: 99  PKSDLDRVLAVNTTGGFLGAKHAARVMIP---QHKGCILFTASACTEIAGIGSPAYTVSK 155
             +D  R++  N     LG  +  R  +P   + KG ++  +S    +    +  Y  +K
Sbjct: 104 DTTDWTRMIDTN----LLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATK 159
Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN 215
           +G+ A  + L  E+ + G+RV  + P G        +  + A  E +   +  +R   L 
Sbjct: 160 FGVNAFSETLRQEVTERGVRVVVIEP-GTTDTELRGHITHTATKEMYEQRISQIRK--LQ 216
Query: 216 AEGIANAALYLAT 228
           A+ IA A  Y  T
Sbjct: 217 AQDIAEAVRYAVT 229

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV+   +NL +  A K+G    ++  D
Sbjct: 219 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAET-ASKVGGTALWL--D 275
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT----- 111
           VT++D +  + +     +G K DI+ NNAGI      + +D  +   D VLAVN      
Sbjct: 276 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDAR--WDAVLAVNLLAPLR 333
Query: 112 -TGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAEL 169
            T G +G            +G  +   S+   IAG  G   Y  +K G+I + + LA  L
Sbjct: 334 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 386
Query: 170 RQYGLRVNCVSP 181
              G+ +N V+P
Sbjct: 387 AAKGITINAVAP 398

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 80/193 (41%), Gaps = 13/193 (6%)
Query: 39  LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDT 98
           LG  L    G  V  +  DV     +   V + V   G LDI+ NNAGI   G   V D 
Sbjct: 47  LGDELTAA-GAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLG--PVEDA 103
Query: 99  PKSDLDRVLAVNTTGGFLGAKHAARVMIP---QHKGCILFTASACTEIAGIGSPAYTVSK 155
             +D  R +  N     LG  +  R  +P   + KG ++  +S    +    +  Y  +K
Sbjct: 104 DTTDWTRXIDTN----LLGLXYXTRAALPHLLRSKGTVVQXSSIAGRVNVRNAAVYQATK 159
Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN 215
           +G+ A  + L  E+ + G+RV  + P G        +  + A  E +   +  +R   L 
Sbjct: 160 FGVNAFSETLRQEVTERGVRVVVIEP-GTTDTELRGHITHTATKEXYEQRISQIRK--LQ 216
Query: 216 AEGIANAALYLAT 228
           A+ IA A  Y  T
Sbjct: 217 AQDIAEAVRYAVT 229

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV+   +NL +  A K+G    ++  D
Sbjct: 211 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAET-ASKVGGTALWL--D 267
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT----- 111
           VT++D +  + +     +G K DI+ NNAGI      + +D  +   D VLAVN      
Sbjct: 268 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDAR--WDAVLAVNLLAPLR 325
Query: 112 -TGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAEL 169
            T G +G            +G  +   S+   IAG  G   Y  +K G+I + + LA  L
Sbjct: 326 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 378
Query: 170 RQYGLRVNCVSP 181
              G+ +N V+P
Sbjct: 379 AAKGITINAVAP 390

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 54.3 bits (129), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV+   +NL +  A K+G    ++  D
Sbjct: 195 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAET-ASKVGGTALWL--D 251
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT----- 111
           VT++D +  + +     +G K DI+ NNAGI      + +D  +   D VLAVN      
Sbjct: 252 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDAR--WDAVLAVNLLAPLR 309
Query: 112 -TGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAEL 169
            T G +G            +G  +   S+   IAG  G   Y  +K G+I + + LA  L
Sbjct: 310 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 362
Query: 170 RQYGLRVNCVSP 181
              G+ +N V+P
Sbjct: 363 AAKGITINAVAP 374

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 54.3 bits (129), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 87/192 (45%), Gaps = 23/192 (11%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV+   +NL +  A K+G    ++  D
Sbjct: 203 LDGKVAIVTGAARGIGATIAEVFARDGAHVVAIDVESAAENLAET-ASKVGGTALWL--D 259
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT----- 111
           VT++D +  + +     +G K DI+ NNAGI      + +D  +   D VLAVN      
Sbjct: 260 VTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDDAR--WDAVLAVNLLAPLR 317
Query: 112 -TGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAEL 169
            T G +G            +G  +   S+   IAG  G   Y  +K G+I + + LA  L
Sbjct: 318 LTEGLVGNGSIG-------EGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPGL 370
Query: 170 RQYGLRVNCVSP 181
              G+ +N V+P
Sbjct: 371 AAKGITINAVAP 382

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 84/184 (45%), Gaps = 15/184 (8%)
Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +E   + D   A Y +LD + +NAG++   G  S  D P+   D V+ VN    F+  + 
Sbjct: 79  EECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQD-PQIWQD-VMQVNVNATFMLTQA 136
Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
              +++    G ++FT+S+          AY  SK+    ++++LA E +   LRVNC++
Sbjct: 137 LLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLADEYQNRSLRVNCIN 196
Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G      +R S+  +   AF +E      ++     I    L+L  D++   TG+   
Sbjct: 197 PGG------TRTSMRAS---AFPTEDPQ---KLKTPADIMPLYLWLMGDDSRRKTGMTFD 244
Query: 241 VDGG 244
              G
Sbjct: 245 AQPG 248

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 34  DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFA 93
           DV D     +  + G  V  + CDV   D++  L     A++ +LD++ NNAG      +
Sbjct: 68  DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAG------S 121
Query: 94  SVLDTPKSDL-----DRVLAVNTTGGFLGAKHAARVMIPQ--HKGCILFTASACTEIAGI 146
           +V   P  ++     + ++A N TG FL  +HA R    Q    G I+   S   +    
Sbjct: 122 NVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRP 181
Query: 147 GSPAYTVSKYGIIALVKILAAELRQY 172
            S  YT +K+ I  L K  A + R +
Sbjct: 182 NSAPYTATKHAITGLTKSTALDGRXH 207

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 21  KLFHENGAKVVIADVQDNLGQ---ALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYG 76
           +  H  GAK++     + L +    LA  L G++   + CDVT+++E+T   +T   + G
Sbjct: 26  RSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETIKQEVG 85
Query: 77  KLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGA--KHAARVMIPQHKGC 132
            +  + +     +R       +DT +     +LA N +   L A  + A +VM     G 
Sbjct: 86  TIHGVAHCIAFANRDDLKGEFVDTSRDGF--LLAQNISAFSLTAVAREAKKVMTE--GGN 141
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS--PYGLVS--GI 188
           IL       E          V+K  + A VK LA +L Q+G+RVN +S  P   +S  G+
Sbjct: 142 ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGV 201
Query: 189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
              NSI   I      E   LR +    E + + A++L +D A  VTG N+ VD G+ +
Sbjct: 202 GDFNSILREI-----EERAPLR-RTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGYHI 254

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 109/239 (45%), Gaps = 22/239 (9%)
Query: 21  KLFHENGAKVVIADVQDNLGQ---ALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYG 76
           +  H  GAK++     + L +    LA  L G++   + CDVT+++E+T   +T   + G
Sbjct: 26  RSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVLPCDVTNDEELTACFETIKQEVG 85
Query: 77  KLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGA--KHAARVMIPQHKGC 132
            +  + +     +R       +DT +     +LA N +   L A  + A +VM     G 
Sbjct: 86  TIHGVAHCIAFANRDDLKGEFVDTSRDGF--LLAQNISAFSLTAVAREAKKVMTE--GGN 141
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS--PYGLVS--GI 188
           IL       E          V+K  + A VK LA +L Q+G+RVN +S  P   +S  G+
Sbjct: 142 ILTLTYLGGERVVKNYNVMGVAKASLEASVKYLANDLGQHGIRVNAISAGPIRTLSAKGV 201
Query: 189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
              NSI   I      E   LR +    E + + A++L +D A  VTG N+ VD G+ +
Sbjct: 202 GDFNSILREI-----EERAPLR-RTTTQEEVGDTAVFLFSDLARGVTGENIHVDSGYHI 254

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 8/200 (4%)
Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
           G  V     D+++E+E+  L D A  ++GK+DI  N  G V +    +++T +++ D + 
Sbjct: 62  GAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMD 119
Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
            +N    +   K AA+ M P   G I+  A++           Y  +K  +    +  + 
Sbjct: 120 TINNKVAYFFIKQAAKHMNPN--GHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASK 177
Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           EL +  + VN ++P  + +          +        MGN   Q+   E IA    +L 
Sbjct: 178 ELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGN---QLTKIEDIAPIIKFLT 234
Query: 228 TDEASDVTGLNLVVDGGFSV 247
           TD    + G  +  +GG++ 
Sbjct: 235 TD-GWWINGQTIFANGGYTT 253

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 108/243 (44%), Gaps = 38/243 (15%)
Query: 25  ENGAKVVIA-----DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
           E GA +V+A      ++D   Q      G     +  D+T + ++ +LVD  +  YG++D
Sbjct: 33  EQGADLVLAARTVERLEDVAKQV--TDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90
Query: 80  IMYNNAGIVD--RGFASVLDTPKSD---LDRVLAVNTTGGFLGAKHAARVMIPQHKGCIL 134
           ++ NNA  V   + FA+       D   L    A+    GF  A       + + KG ++
Sbjct: 91  VVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPA-------LEESKGAVV 143
Query: 135 FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI 194
              S     +     AY ++K  ++A+ + LA EL + G+RVN V P G + G + ++  
Sbjct: 144 NVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP-GYIWGGTLKS-- 200
Query: 195 NPAILEAFLSEMGNLRGQVLNA-------------EGIANAALYLATDEASDVTGLNLVV 241
                E    + G     + NA             + +A+A L++A+D AS +TG  L V
Sbjct: 201 ---YFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLASGITGQALDV 257
Query: 242 DGG 244
           + G
Sbjct: 258 NCG 260

>pdb|3H7A|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Rhodopseudomonas Palustris Length = 252

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 14/148 (9%)
Query: 24  HENGAKV--VIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM 81
             NG K+  ++A+++   G+ +A  L         D  +EDE+T  ++ A A +  L++ 
Sbjct: 38  RRNGEKLAPLVAEIEAAGGRIVARSL---------DARNEDEVTAFLNAADA-HAPLEVT 87
Query: 82  YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
             N G  +  F  +L+T      +V  +    GF+  + +AR+M+   +G I FT +  +
Sbjct: 88  IFNVG-ANVNF-PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATAS 145
Query: 142 EIAGIGSPAYTVSKYGIIALVKILAAEL 169
              G G  A+  +K+G+ A+ + +A EL
Sbjct: 146 LRGGSGFAAFASAKFGLRAVAQSMAREL 173

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 44  ACKLGEDVCYIHCDVTSEDEITNLVDTA-VAKYGKLDIMYNNA-----GIVDRGFASVLD 97
           A  LG     + CD + E E+ +L +     + G+LD++ NNA      I++    +  +
Sbjct: 49  AQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWE 108
Query: 98  TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG 157
           TP S  D +  V   G +  + + AR+M+P  +G I+  +S  +       P Y V K  
Sbjct: 109 TPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAA 167
Query: 158 IIALVKILAAELRQYGLRVNCVSPY 182
              L    A ELR++G  V+CVS +
Sbjct: 168 CDKLAADCAHELRRHG--VSCVSLW 190

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DV + ++   +++  +A++G    + +NAGI  D  F ++      D D V+  N    +
Sbjct: 84  DVANREQCREVLEHEIAQHGAWYGVVSNAGIARDAAFPAL---SNDDWDAVIHTNLDSFY 140
Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGL 174
              +     MI   +G  + T S+ + + G  G   Y+ +K GII   K LA EL +  +
Sbjct: 141 NVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKI 200
Query: 175 RVNCVSPYGLVSGI--SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
            VNC++P  + +G+     +++  A+    +  MG        AE +A  A YL +D A 
Sbjct: 201 TVNCIAPGLIDTGMIEMEESALKEAMSMIPMKRMG-------QAEEVAGLASYLMSDIAG 253
Query: 233 DVTGLNLVVDGGF 245
            VT   + ++GG 
Sbjct: 254 YVTRQVISINGGM 266

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 38/252 (15%)
Query: 22  LFHENGAKVVIA-----DVQDNLGQALACKLGE-DVCYIHCDVTSEDEITNLVDTAVAKY 75
           LF + GA V I       +++     L   + E  V  +  DVT+ED    ++++ + ++
Sbjct: 25  LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84
Query: 76  GKLDIMYNNAGI----------VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
           GK+D++ NNAG            D+G      T K +L  V+ +             +  
Sbjct: 85  GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMT---------KKVKPH 135
Query: 126 IPQHKGCILFTASACTEIAGIGSPA----YTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
           +   KG I+  +S    +AG  +      Y ++K  +    +  A +L ++G+RVN VSP
Sbjct: 136 LVASKGEIVNVSSI---VAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP 192
Query: 182 YGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLATDEAS-DVT 235
             + +G ++   +     + F + M + +     G     E IAN  L+LA    S  + 
Sbjct: 193 GMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLADRNLSFYIL 252
Query: 236 GLNLVVDGGFSV 247
           G ++V DGG S+
Sbjct: 253 GQSIVADGGTSL 264

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 89/198 (44%), Gaps = 14/198 (7%)
Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
            CDV++ D +T  +    A  G +  +  NAG+     A+ L     D   V  VN  G 
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATEL--THEDFAFVYDVNVFGV 127
Query: 115 FLGAKHAARVMI-PQHKGCILFTASACTEI-------AGIGSPAYTVSKYGIIALVKILA 166
           F   +  A++ +  Q KG I+ T+S  ++I         +    Y  SK     LVK LA
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187
Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           AE    G+RVN +SP G V+   + + ++  I +   S +   R      E +   A+ L
Sbjct: 188 AEWASAGIRVNALSP-GYVNTDQTAH-MDKKIRDHQASNIPLNR--FAQPEEMTGQAILL 243
Query: 227 ATDEASDVTGLNLVVDGG 244
            +D A+ +TG    +DGG
Sbjct: 244 LSDHATYMTGGEYFIDGG 261

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 40  GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA-GIVDRGFASVLDT 98
           GQ LA K         CD+  ED++   V   V  +G +DI+ NNA  I  RG    LDT
Sbjct: 62  GQGLALK---------CDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG---TLDT 109
Query: 99  PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGS-PAYTVSKY 156
           P    D    VN  G F+ A+     ++      IL  A   +   A  G+   YT++K 
Sbjct: 110 PXKRFDLXQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKX 169
Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLVS 186
           G   +   LAAE    G+ +N + P  +++
Sbjct: 170 GXSLVTLGLAAEFGPQGVAINALWPRTVIA 199

>pdb|1ULU|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 20/240 (8%)
Query: 23  FHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
             E GA+V ++   + L    + LA  LG  + +   DVT ++E+  L       +G LD
Sbjct: 30  LKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFGGLD 88
Query: 80  IMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
            + +      R       +DT + D    L V+     +     A  ++ +  G +  T 
Sbjct: 89  YLVHAIAFAPREAXEGRYIDTRRQDWLLALEVSAYS-LVAVARRAEPLLREGGGIVTLTY 147
Query: 138 SACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI 194
            A  ++     P Y V   +K  + A V+ LA EL   G+RVN +S  G V  +++R+  
Sbjct: 148 YASEKVV----PKYNVXAIAKAALEASVRYLAYELGPKGVRVNAISA-GPVRTVAARSI- 201
Query: 195 NPAILEAF--LSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSL 252
            P   + +  +++   LR  +   E + N  L+L +  AS +TG  + VD G+ +    L
Sbjct: 202 -PGFTKXYDRVAQTAPLRRNITQEE-VGNLGLFLLSPLASGITGEVVYVDAGYHIXGXEL 259

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 102/233 (43%), Gaps = 16/233 (6%)
Query: 23  FHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
             E GA+V ++   + L    + LA  LG  + +   DVT ++E+  L       +G LD
Sbjct: 30  LKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-RADVTQDEELDALFAGVKEAFGGLD 88
Query: 80  IMYNNAGIVDRGF--ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA 137
            + +      R       +DT + D    L V+     +     A  ++ +  G +  T 
Sbjct: 89  YLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYS-LVAVARRAEPLLREGGGIVTLTY 147
Query: 138 SACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI 194
            A  ++     P Y V   +K  + A V+ LA EL   G+RVN +S  G V  +++R+  
Sbjct: 148 YASEKVV----PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISA-GPVRTVAARSIP 202
Query: 195 NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
               +   +++   LR  +   E + N  L+L +  AS +TG  + VD G+ +
Sbjct: 203 GFTKMYDRVAQTAPLRRNITQEE-VGNLGLFLLSPLASGITGEVVYVDAGYHI 254

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 1   LEGKVXXXXXXXXXXXXXXXKLFHENGAKVVIADVQ---DNLGQALACKLGEDVCYIHCD 57
           L+GKV               ++F  +GA VV  DV    ++L + +A K+G     +  D
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDL-KRVADKVGG--TALTLD 267
Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           VT++D +  +       +G K+DI+ NNAGI      + +D  +   D V+AVN     L
Sbjct: 268 VTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKR--WDAVIAVN----LL 321
Query: 117 GAKHAARVMIPQH---KGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQY 172
             +     ++      +G  +   S+   IAG  G   Y  +K G+I L + LA  L   
Sbjct: 322 APQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADK 381
Query: 173 GLRVNCVSP 181
           G+ +N V+P
Sbjct: 382 GITINAVAP 390

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           +++  + I N      A+   +DI+ NNAGI            + +   V+  N +  F 
Sbjct: 62  NISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXX--RXSEDEWQSVINTNLSSIFR 119
Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            +K   R    +  G I+   S        G   Y  +K G+I   K LA E+    + V
Sbjct: 120 XSKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179
Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N V+P  + +  + + +      ++F++      GQ+   + IA A  +LA++EA  +TG
Sbjct: 180 NVVAPGFIATDXTDKLTDEQ---KSFIATK-IPSGQIGEPKDIAAAVAFLASEEAKYITG 235
Query: 237 LNLVVDGG 244
             L V+GG
Sbjct: 236 QTLHVNGG 243

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 29/246 (11%)
Query: 21  KLFHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG 76
           ++F  +G   VIA           + LA   G     +  DV +   +   VD A+ ++G
Sbjct: 45  EIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104
Query: 77  KLDIMYNNAG---IVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCI 133
           ++DI+ N A    +   G  S      +    V+ ++T+G F  ++         H G I
Sbjct: 105 RIDILINCAAGNFLCPAGALSF-----NAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVI 159
Query: 134 L-FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS--- 189
           +  TA+       +   A + +K  + A+ + LA E     +RVN ++P G +SG     
Sbjct: 160 VNITATLGNRGQALQVHAGS-AKAAVDAMTRHLAVEWGPQNIRVNSLAP-GPISGTEGLR 217
Query: 190 ----SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
                + S++  +  + L  +GN          IA++ LYLA+  AS VTG  LV DGG 
Sbjct: 218 RLGGPQASLSTKVTASPLQRLGN-------KTEIAHSVLYLASPLASYVTGAVLVADGGA 270
Query: 246 SVANPS 251
            +  P+
Sbjct: 271 WLTFPN 276

>pdb|3PJF|A Chain A, Structure Of Enr G93v Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 29/243 (11%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 80
Query: 78  LDIMYNNAGIVDRGFA-SVLDTPKSDLD--RVLAVNTTGGFLGAKHAARVMIPQHKGC-- 132
           +   ++       GF  S++  P   LD   V AV   G  +    ++   +   K C  
Sbjct: 81  VWPKFD-------GFVHSIVFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133
Query: 133 ILFTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +L   SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +
Sbjct: 134 MLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPI 192
Query: 186 SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGF
Sbjct: 193 RTLAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 246 SVA 248
           S+A
Sbjct: 252 SIA 254

>pdb|1DFG|A Chain A, X-Ray Structure Of Escherichia Coli Enoyl Reductase With Bound Nad And Benzo-Diazaborine Length = 261

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 25  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 79
Query: 78  LDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC--IL 134
           +   ++  G V   GFA      + D D V AV   G  +    ++   +   K C  +L
Sbjct: 80  VWPKFD--GFVHSIGFAP---GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 134
Query: 135 FTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG 187
              SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +  
Sbjct: 135 NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRT 193
Query: 188 ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGFS+
Sbjct: 194 LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 252
Query: 248 A 248
           A
Sbjct: 253 A 253

>pdb|1C14|A Chain A, Crystal Structure Of E Coli Enoyl Reductase-nad+-triclosan Complex Length = 262

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 80
Query: 78  LDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC--IL 134
           +   ++  G V   GFA      + D D V AV   G  +    ++   +   K C  +L
Sbjct: 81  VWPKFD--GFVHSIGFAP---GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 135
Query: 135 FTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG 187
              SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +  
Sbjct: 136 NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRT 194
Query: 188 ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGFS+
Sbjct: 195 LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 253
Query: 248 A 248
           A
Sbjct: 254 A 254

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 24/176 (13%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           K   + GA+VV+ D++   G+ +   LG+   +   DVT E  + + +D A    G L I
Sbjct: 27  KRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVTDEAAVASALDLA-ETMGTLRI 82
Query: 81  MYNNAG------IVDR-GFASVLDTPKSDLDRVLAVNTTGGF----LGAKHAARVMI--- 126
           + N AG      ++ R G  S+     +   +++ +N  G F    L A+  A+      
Sbjct: 83  VVNCAGTGNAIRVLSRDGVFSL-----AAFRKIVDINLVGSFNVLRLAAERIAKTEPVGP 137
Query: 127 -PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
             + +G I+ TAS       IG  AY+ SK G++ +   +A +L  + +RV  ++P
Sbjct: 138 NAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAP 193

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 56  CDVTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           CD +   E   L+ T  + +G KLDI+ NN G +       LD    D    ++ N    
Sbjct: 70  CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESA 127
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA----YTVSKYGIIALVKILAAELR 170
           +  ++ A  ++     G I+F +S    IAG+ S +    Y+ +K  +  L + LA E  
Sbjct: 128 YHLSQLAHPLLKASGCGNIIFMSS----IAGVVSASVGSIYSATKGALNQLARNLACEWA 183
Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALYLA 227
             G+R N V+P  + + ++       A+ +    ++   R   G+    E +++   +L 
Sbjct: 184 SDGIRANAVAPAVIATPLAE------AVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLC 237
Query: 228 TDEASDVTGLNLVVDGGFSV 247
              AS +TG  + VDGG +V
Sbjct: 238 MPAASYITGQTICVDGGLTV 257

>pdb|1QSG|A Chain A, Crystal Structure Of Enoyl Reductase Inhibition By Triclosan Length = 265

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 25/241 (10%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 29  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 83
Query: 78  LDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC--IL 134
           +   ++  G V   GFA      + D D V AV   G  +    ++   +   K C  +L
Sbjct: 84  VWPKFD--GFVHSIGFAP---GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSML 138
Query: 135 FTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSG 187
              SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +  
Sbjct: 139 NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRT 197
Query: 188 ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGFS+
Sbjct: 198 LAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 256
Query: 248 A 248
           A
Sbjct: 257 A 257

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGG 114
            DV+S++ +   ++      G+  I+ NNAGI  D     + D    D   V+  N    
Sbjct: 83  LDVSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNLLVRMKDDEWFD---VVNTNLNSL 139
Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           +  +K   R M     G I+   S    +   G   Y  +K G+    + LA E+    +
Sbjct: 140 YRLSKAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAI 199
Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
            VN V+P G +    +R  +  A  EA L ++    G++  AE IA    +LA+D A+ V
Sbjct: 200 TVNAVAP-GFIDTDMTR-ELPEAQREALLGQI--PLGRLGQAEEIAKVVGFLASDGAAYV 255
Query: 235 TGLNLVVDGGF 245
           TG  + V+GG 
Sbjct: 256 TGATVPVNGGM 266

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 15/156 (9%)
Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           I  DVT  + I  +    +A+YG++D++ NNAG    G  +  +T + +L  +  ++   
Sbjct: 56  ISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRDLFELHV-- 111
Query: 114 GFLGAKHAARVMIPQHK----GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
              G     R ++PQ +    G ++  +S   +++  G  AY+ +K  +  L + LA E+
Sbjct: 112 --FGPARLTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEV 169
Query: 170 RQYGLRVNCVSPYGLVSGISSRNSI-----NPAILE 200
             +G++V  V P    + +  + +      NPA  E
Sbjct: 170 APFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAE 205

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
           +E   + D   A Y +LD + +NAG++          P+   D V  VN    F   +  
Sbjct: 80  EECRQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQDPQIWQD-VXQVNVNATFXLTQAL 138
Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
             +++    G ++FT+S+          AY  SK+      ++LA E +   LRVNC++P
Sbjct: 139 LPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLADEYQNRSLRVNCINP 198
Query: 182 YGLVSGISSRNSINP 196
            G  +  S R S  P
Sbjct: 199 GG--TRTSXRASAFP 211

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/235 (20%), Positives = 106/235 (45%), Gaps = 15/235 (6%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           K FH  GA++        L    + +A   G D+  + CDV+ +++I NL       +G 
Sbjct: 41  KSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-VKCDVSLDEDIKNLKKFLEENWGS 99
Query: 78  LDIMYNNAGIV--DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILF 135
           LDI+ ++      +     V+DT +      + ++        +    +M  ++   +  
Sbjct: 100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTL 159
Query: 136 TASACTEIAGIGSPAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN 192
           +     ++     P Y V   +K  + + V+ LA ++ ++G R+N +S  G V  +++ +
Sbjct: 160 SYYGAEKVV----PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISA-GPVKTLAAYS 214
Query: 193 SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
                +L    +++ N  G+ +  E + + A++L +D A  +TG  + VD G+ +
Sbjct: 215 ITGFHLLMEHTTKV-NPFGKPITIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI 268

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSED    L       Y +LD + +NAG++          P+   D V+ VN    F+  
Sbjct: 77  TSED-CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQD-VMQVNVNATFMLT 134
Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +    +++    G ++FT+S+          AY  SK+    ++++LA E +Q  LRVNC
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 193
Query: 179 VSPYGLVSGISS 190
           ++P G  + + +
Sbjct: 194 INPGGTRTAMRA 205

>pdb|3PJD|A Chain A, Structure Of Enr G93a Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 80
Query: 78  LDIMYNNAGIVDRGFA-SVLDTPKSDLD--RVLAVNTTGGFLGAKHAARVMIPQHKGC-- 132
           +   ++       GF  S+   P   LD   V AV   G  +    ++   +   K C  
Sbjct: 81  VWPKFD-------GFVHSIAFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133
Query: 133 ILFTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +L   SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +
Sbjct: 134 MLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPI 192
Query: 186 SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGF
Sbjct: 193 RTLAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 246 SVA 248
           S+A
Sbjct: 252 SIA 254

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
Query: 23  FHENGAKVVIADVQDNLGQALACKLGEDVCYIHC-----DVTSEDEITNLVDTAVAKYGK 77
           F + GA + IA + D  G A   K   +   + C     D++ E    ++V   V + G 
Sbjct: 67  FAKEGANIAIAYL-DEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125
Query: 78  LDIMYNNAG--IVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILF 135
           L+I+ NN       +G   +       L++   +N    F   K A   +  +    I+ 
Sbjct: 126 LNILVNNVAQQYPQQGLEYIT---AEQLEKTFRINIFSYFHVTKAALSHL--KQGDVIIN 180
Query: 136 TASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN 195
           TAS            Y+ +K  I+A  + L+  L Q G+RVN V+P G +      +S +
Sbjct: 181 TASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP-GPIWTPLIPSSFD 239
Query: 196 PAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
              +  F S +   R GQ      +A A +YLA+ ++S VTG  + V+GG
Sbjct: 240 EKKVSQFGSNVPXQRPGQPYE---LAPAYVYLASSDSSYVTGQXIHVNGG 286

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 21/223 (9%)
Query: 28  AKVVIADVQDNLGQALACKLGEDVCYIH----CDVTSEDEITNLVDTAVAKYGKLDIMYN 83
           A+  + ++Q N G A +  +G ++  +H       + ++E+ N   +      K DI+ N
Sbjct: 45  AEETVYEIQSNGGSAFS--IGANLESLHGVEALYSSLDNELQNRTGST-----KFDILIN 97
Query: 84  NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI 143
           NAGI    F  + +T +   DR ++VN    F   + A   +    +  I+  +SA T I
Sbjct: 98  NAGIGPGAF--IEETTEQFFDRXVSVNAKAPFFIIQQALSRLRDNSR--IINISSAATRI 153
Query: 144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL 203
           +     AY+ +K  I      LA +L   G+ VN + P G V    +   ++    + + 
Sbjct: 154 SLPDFIAYSXTKGAINTXTFTLAKQLGARGITVNAILP-GFVKTDXNAELLSDPXXKQYA 212
Query: 204 SEMG--NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           + +   N  G+V   E IA+ A +LA+ ++  VTG  + V GG
Sbjct: 213 TTISAFNRLGEV---EDIADTAAFLASPDSRWVTGQLIDVSGG 252

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSE+    L    V  Y +LD + +NAG++          P+   D V+ +N    F+  
Sbjct: 73  TSEN-CQQLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQD-VMQINVNATFMLT 130
Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +    +++    G ++FT+S+          AY  SK+    ++++LA E +Q  LRVNC
Sbjct: 131 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 189
Query: 179 VSPYGLVSGISS 190
           ++P G  + + +
Sbjct: 190 INPGGTRTAMRA 201

>pdb|3PJE|A Chain A, Structure Of Enr G93s Mutant-Nad+-Triclosan Complex Length = 270

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 111/243 (45%), Gaps = 29/243 (11%)
Query: 21  KLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK 77
           +  H  GA++      D L    +  A +LG D+  + CDV  +  I    DT  A+ GK
Sbjct: 26  QAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LQCDVAEDASI----DTMFAELGK 80
Query: 78  LDIMYNNAGIVDRGFA-SVLDTPKSDLD--RVLAVNTTGGFLGAKHAARVMIPQHKGC-- 132
           +   ++       GF  S+   P   LD   V AV   G  +    ++   +   K C  
Sbjct: 81  VWPKFD-------GFVHSISFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 133
Query: 133 ILFTASACTEIAGIGS----PAYTV---SKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +L   SA   ++ +G+    P Y V   +K  + A V+ +A  +   G+RVN +S  G +
Sbjct: 134 MLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPI 192
Query: 186 SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             +++    +   + A    +  +R + +  E + N+A +L +D ++ ++G  + VDGGF
Sbjct: 193 RTLAASGIKDFRKMLAHCEAVTPIR-RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 251
Query: 246 SVA 248
           S+A
Sbjct: 252 SIA 254

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 16/229 (6%)
Query: 23  FHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL 78
           F + GA + IA + +    N  +    K G     +  D++ E    ++V   V + G L
Sbjct: 67  FAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126
Query: 79  DIMYNNAG--IVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFT 136
           +I+ NN       +G   +       L++   +N    F   K A   +  +    I+ T
Sbjct: 127 NILVNNVAQQYPQQGLEYIT---AEQLEKTFRINIFSYFHVTKAALSHL--KQGDVIINT 181
Query: 137 ASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP 196
           AS            Y+ +K  I+A  + L+  L Q G+RVN V+P G +      +S + 
Sbjct: 182 ASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP-GPIWTPLIPSSFDE 240
Query: 197 AILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
             +  F S +   R GQ      +A A +YLA+ ++S VTG  + V+GG
Sbjct: 241 KKVSQFGSNVPMQRPGQPYE---LAPAYVYLASSDSSYVTGQMIHVNGG 286

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSE+    L       Y +LD + +NAG++          P+   D V+ VN    F+  
Sbjct: 75  TSEN-CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQD-VMQVNVNATFMLT 132
Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +    +++    G ++FT+S+          AY  SK+    ++++LA E +Q  LRVNC
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LRVNC 191
Query: 179 VSPYGLVSGISS 190
           ++P G  + + +
Sbjct: 192 INPGGTRTAMRA 203

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 32  IADVQDNLG-QALACKLGEDVC------YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN 84
           +ADV    G +   C   E++       Y+ CD+  +      +D    K  ++DI+  N
Sbjct: 35  VADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKD------LDLLFEKVKEVDILVLN 88
Query: 85  AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP--QHKGCILFTASACTE 142
           AG    GF   L    ++ D   A+++   FL      R  +P  + KG     A     
Sbjct: 89  AGGPKAGFFDEL----TNEDFKEAIDSL--FLNMIKIVRNYLPAMKEKGWGRIVAITSFS 142
Query: 143 IAGIGSPAYTV--SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
           +       YT   ++  +   +K L+ E+  YG+ VNCV+P G       +  ++    +
Sbjct: 143 VISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAP-GWTETERVKELLSEEKKK 201
Query: 201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
              S++   R  +   E IA+   +L +++AS +TG  +VVDGG S
Sbjct: 202 QVESQIPMRR--MAKPEEIASVVAFLCSEKASYLTGQTIVVDGGLS 245

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 10/179 (5%)
Query: 28  AKVVIADVQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN 84
           +K+V+ D+  +  +  A K   LG  V     D ++ ++I +      A+ G + I+ NN
Sbjct: 56  SKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNN 115
Query: 85  AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA 144
           AG+V    + +  T    +++   VN    F   K     M   + G I+  ASA   ++
Sbjct: 116 AGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS 173
Query: 145 GIGSPAYTVSKYGIIALVKILAAE---LRQYGLRVNCVSPYGLVSGI--SSRNSINPAI 198
                AY  SK+  +   K L  E   L+  G++  C+ P  + +G   +   S+ P +
Sbjct: 174 VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPSTSLGPTL 232

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 13/185 (7%)
Query: 72  VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG 131
           + KY K+DI+ NN GI +       D P  D  ++  VN   G    +   +  I + +G
Sbjct: 80  IEKYPKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIXSGVRLTRSYLKKXIERKEG 137
Query: 132 CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP-YGLVSGISS 190
            ++F AS            Y+ +K   ++L + LA       + VN + P   L  G+ +
Sbjct: 138 RVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTGTNVTVNTIXPGSTLTEGVET 197
Query: 191 R-NSINP----AILEA---FLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
             NS+ P     I EA   F  E    ++  +++  E IA+   +L++  +S + G  L 
Sbjct: 198 XLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIAHLVTFLSSPLSSAINGSALR 257
Query: 241 VDGGF 245
           +DGG 
Sbjct: 258 IDGGL 262

>pdb|4ALI|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P1) Length = 282

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           K+  + GAK+V    ++   + L   L +    +      DV S++E+ N  +      G
Sbjct: 52  KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 111
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-----------HAARVM 125
            +D +Y++       FA++      DL    +  +  GFL A+           H A+ +
Sbjct: 112 NIDGVYHSIA-----FANM-----EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL 161
Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +P+  G I+ T     E A        V+K  + A VK LA +L    +RVN +S  G +
Sbjct: 162 MPE-GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA-GPI 219
Query: 186 SGISSRN--SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDG 243
             +S++     N  + E  + E   L+  V   E +   A YL +D +S VTG N+ VD 
Sbjct: 220 RTLSAKGVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDS 276
Query: 244 GF 245
           GF
Sbjct: 277 GF 278

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 22/211 (10%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA--GIVDRGFASVLDTPKSDL 103
           KLG  V  +  +V    +I  +       +G+LD+  NNA  G+       V++  ++  
Sbjct: 51  KLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV----LRPVMELEETHW 106
Query: 104 DRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT-------VSKY 156
           D  + +N       A+ AA++M     G I+        I+ +GS  Y        VSK 
Sbjct: 107 DWTMNINAKALLFCAQEAAKLMEKNGGGHIV-------SISSLGSIRYLENYTTVGVSKA 159
Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNA 216
            + AL + LA EL    + VN VS   + +           +LE   +      G+++  
Sbjct: 160 ALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLED--ARQNTPAGRMVEI 217
Query: 217 EGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           + + +   +L + +A  + G  ++VDGG S+
Sbjct: 218 KDMVDTVEFLVSSKADMIRGQTIIVDGGRSL 248

>pdb|4ALL|A Chain A, Crystal Structure Of S. Aureus Fabi In Complex With Nadp And Triclosan (P212121) Length = 277

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           K+  + GAK+V    ++   + L   L +    +      DV S++E+ N  +      G
Sbjct: 47  KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 106
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-----------HAARVM 125
            +D +Y++       FA++      DL    +  +  GFL A+           H A+ +
Sbjct: 107 NIDGVYHSIA-----FANM-----EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL 156
Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS--PYG 183
           +P+  G I+ T     E A        V+K  + A VK LA +L    +RVN +S  P  
Sbjct: 157 MPE-GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIR 215
Query: 184 LVS--GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV 241
            +S  G+   N+I   I      E   L+  V   E +   A YL +D +S VTG N+ V
Sbjct: 216 TLSAKGVGGFNTILKEI-----EERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHV 269
Query: 242 DGGF 245
           D GF
Sbjct: 270 DSGF 273

>pdb|4FS3|A Chain A, Crystal Structure Of Staphylococcus Aureus Enoyl-Acp Reductase In Complex With Nadp And Afn-1252 Length = 256

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           K+  + GAK+V    ++   + L   L +    +      DV S++E+ N  +      G
Sbjct: 26  KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 85
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-----------HAARVM 125
            +D +Y++       FA++      DL    +  +  GFL A+           H A+ +
Sbjct: 86  NIDGVYHSIA-----FANM-----EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL 135
Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +P+  G I+ T     E A        V+K  + A VK LA +L    +RVN +S  G +
Sbjct: 136 MPE-GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA-GPI 193
Query: 186 SGISSRN--SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDG 243
             +S++     N  + E  + E   L+  V   E +   A YL +D +S VTG N+ VD 
Sbjct: 194 RTLSAKGVGGFNTILKE--IKERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDS 250
Query: 244 GF 245
           GF
Sbjct: 251 GF 252

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 102/239 (42%), Gaps = 33/239 (13%)
Query: 25  ENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY 82
           E GA+V I           A +L    D   I  D++SE     L         +LDI+ 
Sbjct: 51  EAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILV 110
Query: 83  NNAGIVDRGFASVLDT-PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT 141
           NNAG     + + L++ P S  ++V+ +N T  F       + ++P      L   SA  
Sbjct: 111 NNAGT---SWGAALESYPVSGWEKVMQLNVTSVF----SCIQQLLP------LLRRSASA 157
Query: 142 E----------IAGIGSP-----AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVS 186
           E          +AGI +      AY  SK  +  L ++LA EL    + VN ++P    S
Sbjct: 158 ENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPS 217
Query: 187 GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF 245
            ++   + +P  LEA  + +    G+    E +A  A+ LA    + +TG  + +DGGF
Sbjct: 218 RMTRHIANDPQALEADSASI--PMGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGGF 274

>pdb|3GNT|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (Two Molecules In Au) Length = 256

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 32/242 (13%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           K+  + GAK+V    ++   + L   L +    +      DV S++E+ N  +      G
Sbjct: 26  KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 85
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-----------HAARVM 125
            +D +Y++       FA++      DL    +  +  GFL A+           H A+ +
Sbjct: 86  NIDGVYHSIA-----FANM-----EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL 135
Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
           +P+  G I+ T     E A        V+K  + A VK LA +L    +RVN +S  G +
Sbjct: 136 MPE-GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISA-GPI 193
Query: 186 SGISSRN--SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDG 243
             +S++     N  + E  + E   L+  V   E +   A YL +D +S VTG N+ VD 
Sbjct: 194 RTLSAKGVGGFNTILKE--IEERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHVDS 250
Query: 244 GF 245
           GF
Sbjct: 251 GF 252

>pdb|3GNS|A Chain A, Crystal Structure Of The Staphylococcus Aureus Enoyl-Acyl Carrier Protein Reductase (Fabi) In Apo Form (One Molecule In Au) Length = 260

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           K+  + GAK+V    ++   + L   L +    +      DV S++E+ N  +      G
Sbjct: 30  KVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVG 89
Query: 77  KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-----------HAARVM 125
            +D +Y++       FA++      DL    +  +  GFL A+           H A+ +
Sbjct: 90  NIDGVYHSIA-----FANM-----EDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKL 139
Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS--PYG 183
           +P+  G I+ T     E A        V+K  + A VK LA +L    +RVN +S  P  
Sbjct: 140 MPE-GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIR 198
Query: 184 LVS--GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV 241
            +S  G+   N+I   I      E   L+  V   E +   A YL +D +S VTG N+ V
Sbjct: 199 TLSAKGVGGFNTILKEI-----EERAPLKRNVDQVE-VGKTAAYLLSDLSSGVTGENIHV 252
Query: 242 DGGF 245
           D GF
Sbjct: 253 DSGF 256

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 107/241 (44%), Gaps = 26/241 (10%)
Query: 21  KLFHENGAKVVIADVQDNLGQA---LACKLGE-DVCYIHCDVTSEDEITNLVDTAVAKYG 76
           +  HE GA+++     + L ++   LA  L   D   + CDVT++ EI     +   + G
Sbjct: 27  RSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86
Query: 77  KLD-----IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK-HAARVMIPQHK 130
            +      I + N    +      L+T +     +LA N +   L A   AAR M+ +  
Sbjct: 87  VIHGIAHCIAFANK---EELVGEYLNTNRDGF--LLAHNISSYSLTAVVKAARPMMTE-G 140
Query: 131 GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS--PYGLVS-- 186
           G I+       E+         V+K  + A VK LAA+L +  +RVN +S  P   +S  
Sbjct: 141 GSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAK 200
Query: 187 GISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
           GIS  NSI   I      E   LR +    E + + A +L +D +  +TG NL VD GF 
Sbjct: 201 GISDFNSILKDI-----EERAPLR-RTTTPEEVGDTAAFLFSDMSRGITGENLHVDSGFH 254
Query: 247 V 247
           +
Sbjct: 255 I 255

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIINSCFR 102
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 162
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 163 KGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 222
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 223 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 271
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 272 ITGSIIKVDGGLSL 285

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 99/243 (40%), Gaps = 56/243 (23%)
Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-------FASVLDT 98
           K G        DV     ++  +  AVA++GKLD++  NAGI   G       FA   D 
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD- 126
Query: 99  PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------ 146
               +D V  +NT        HAA   +      I+ T S    +AG+            
Sbjct: 127 ----VDFVGVINTV-------HAALPYL-TSGASIITTGS----VAGLIAAAQPPGAGGP 170
Query: 147 ---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--------- 194
              G   Y+ +K  + +    LAA+L    +R N + P  + + + +   +         
Sbjct: 171 QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLE 230
Query: 195 NPAILEAFLS--EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPSL 252
            P+  +A L+   M  +    + A  I+NA  +LA+DE+  VTGL   VD G      ++
Sbjct: 231 APSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG------AM 284
Query: 253 MKF 255
           +KF
Sbjct: 285 LKF 287

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIINSCFR 82
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 83  AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 142
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 143 KGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 202
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 203 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 251
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 252 ITGSIIKVDGGLSL 265

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR 102
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 162
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 163 KGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 222
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 223 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 271
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 272 ITGSIIKVDGGLSL 285

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIINSCFR 82
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 83  AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 142
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 143 KGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 202
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 203 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 251
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 252 ITGSIIKVDGGLSL 265

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 23  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR 82
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 83  AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 142
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 143 KGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 202
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 203 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 251
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 252 ITGSIIKVDGGLSL 265

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQADLTNSNVLPASCEEIINSCFR 102
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 162
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 163 KGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 222
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 223 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 271
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 272 ITGSIIKVDGGLSL 285

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 40/254 (15%)
Query: 23  FHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT----NLVDTAVA 73
            H+ G +VVI     A+   +L   L  +          D+T+ + +      ++++   
Sbjct: 43  LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFR 102
Query: 74  KYGKLDIMYNNAGIV--------DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            +G+ D++ NNA           D    S   T ++ +  ++  N    FL     A+  
Sbjct: 103 AFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQ 162
Query: 126 IPQHKGC------ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
              +  C      I+    A  +   +    Y + K+ ++ L +  A EL  YG+RVN V
Sbjct: 163 KGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGV 222
Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV------LNAEGIANAALYLATDEASD 233
           +P     G+    S+ P  +     E    R +V       +AE IA+A ++L +  A  
Sbjct: 223 AP-----GV----SLLPVAMGE--EEKDKWRRKVPLGRREASAEQIADAVIFLVSGSAQY 271
Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VDGG S+
Sbjct: 272 ITGSIIKVDGGLSL 285

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 3/125 (2%)
Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSE+    L    V  Y +LD + +NAG++          P+   D V  +N    F   
Sbjct: 96  TSEN-CQQLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQD-VXQINVNATFXLT 153
Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +    +++    G ++FT+S+          AY  SK+      ++LA E +Q  LRVNC
Sbjct: 154 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-LRVNC 212
Query: 179 VSPYG 183
           ++P G
Sbjct: 213 INPGG 217

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 13/153 (8%)
Query: 29  KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV 88
           + +  +++D  G ALA  L         DVT    +      AV  +G++D++ NNAG++
Sbjct: 42  EAIATEIRDAGGTALAQVL---------DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM 92
Query: 89  DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS 148
               + +      + +R++ VN  G   G      +M  Q  G I+   S         +
Sbjct: 93  P--LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTA 150
Query: 149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
             Y  +K+ + A+   L  E     +RV CV+P
Sbjct: 151 AVYCATKFAVRAISDGLRQE--STNIRVTCVNP 181

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 2/172 (1%)
Query: 21  KLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI 80
           + F + G KV+    +    Q L  +LG+++     DV +   I  ++ +  A++  +DI
Sbjct: 18  RRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77
Query: 81  MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC 140
           + NNAG+   G          D + ++  N  G     +     M+ ++ G I+   S  
Sbjct: 78  LVNNAGLA-LGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTA 136
Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN 192
                 G   Y  +K  +      L  +L    +RV  + P GLV G    N
Sbjct: 137 GSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP-GLVGGTEFSN 187

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 15/186 (8%)
Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           TSE+    L       Y +LD + +NAG++          P+   D V  VN    F   
Sbjct: 75  TSEN-CQQLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQNPQVWQD-VXQVNVNATFXLT 132
Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +    +++    G ++FT+S+          AY  SK+      ++LA E +Q  LRVNC
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLADEYQQR-LRVNC 191
Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           ++P G  + + +          AF +E      ++     I    L+L  D++   TG+ 
Sbjct: 192 INPGGTRTAMRA---------SAFPTEDPQ---KLKTPADIXPLYLWLXGDDSRRKTGMT 239
Query: 239 LVVDGG 244
                G
Sbjct: 240 FDAQPG 245

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 3/138 (2%)
Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
           LG  V ++  D+         VD  VA++G++D + NNAGI        LD    + D +
Sbjct: 77  LGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTI 136
Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA---YTVSKYGIIALVK 163
           + VN  G     +   +  +           +  +  A   SP    Y  SK G+ A  +
Sbjct: 137 VGVNLRGTVFFTQAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQ 196
Query: 164 ILAAELRQYGLRVNCVSP 181
            LA  L + G+ V  V P
Sbjct: 197 GLALRLAETGIAVFEVRP 214

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 14/199 (7%)
Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTT 112
           HCDV+    I  + +T   K+GKLD + +  G  D+   S   +D  +S+      ++  
Sbjct: 70  HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 113 GGFLGAKHAARVMIPQHKGCIL-FTASACTEIAGIGSPAYT---VSKYGIIALVKILAAE 168
                 K A ++      G IL  T     ++     P Y    V+K  + A VK LA +
Sbjct: 130 SLTALTKRAEKLX--SDGGSILTLTYYGAEKVV----PNYNVXGVAKAALEASVKYLAVD 183
Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           L    +RVN +S  G +  +++    +   +  +      LR + +  E + ++ALYL +
Sbjct: 184 LGPKHIRVNAISA-GPIKTLAASGIGDFRYILKWNEYNAPLR-RTVTIEEVGDSALYLLS 241
Query: 229 DEASDVTGLNLVVDGGFSV 247
           D +  VTG    VD G+++
Sbjct: 242 DLSRSVTGEVHHVDSGYNI 260

>pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 74  KYGKLDIMYNNAGIVDRGFASVLDT-PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC 132
           ++G+LD + +NA I+  G  + L+  P  D  +V  VN    F   +    ++       
Sbjct: 91  EFGRLDGLLHNASII--GPRTPLEQLPDEDFXQVXHVNVNATFXLTRALLPLLKRSEDAS 148
Query: 133 ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSR 191
           I FT+S+          AY VSK+    L + LA EL     +R N ++P    +G  ++
Sbjct: 149 IAFTSSSVGRKGRANWGAYGVSKFATEGLXQTLADELEGVTAVRANSINPGATRTGXRAQ 208
Query: 192 -----NSI-NPA---ILEAFLSEMG----NLRGQVLNAE 217
                N + NPA   I   +L   G     + GQ LNA+
Sbjct: 209 AYPDENPLNNPAPEDIXPVYLYLXGPDSTGINGQALNAQ 247

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 34/217 (15%)
Query: 45  CKLGEDVCYIH---CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS 101
           C    D CY+H   CDV        LV+ A + Y    ++  +AG    G +SV D  K 
Sbjct: 90  CSALVDACYMHWGRCDV--------LVNNASSFY-PTPLLRKDAG---EGGSSVGD--KE 135
Query: 102 DLDRVLAVNTTGG------FLGAKHAARV--MIPQHKGC---ILFTASACTEIAGIGSPA 150
            L+ V A +  G       FL    A RV     + +G    I+    A T    +G   
Sbjct: 136 SLE-VAAADLFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTM 194
Query: 151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR 210
           YT++K  +  L +  A EL    +RVN VSP     G+S      P  ++        L 
Sbjct: 195 YTMAKEALEGLTRSAALELASLQIRVNGVSP-----GLSVLPDDMPFSVQEDYRRKVPLY 249
Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +  +AE +++  ++L + +A  +TG  + VDGG+S+
Sbjct: 250 QRNSSAEEVSDVVIFLCSPKAKYITGTCIKVDGGYSL 286

>pdb|3K2E|A Chain A, Crystal Structure Of Enoyl-(Acyl-Carrier-Protein) Reductase From Anaplasma Phagocytophilum At 1.9a Resolution Length = 296

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 89/230 (38%), Gaps = 45/230 (19%)
Query: 37  DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVL 96
           D L ++L  KL      + CDV+  + + N+      ++G LD + +     D       
Sbjct: 73  DPLAESLGVKL-----TVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSD------- 120
Query: 97  DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFT--ASACTEIAGIGSPAYTVS 154
              K++L       + G FL + H +         C  FT  AS    +   G    T+S
Sbjct: 121 ---KNELKGRYVDTSLGNFLTSMHIS---------CYSFTYIASKAEPLMTNGGSILTLS 168
Query: 155 KYG-----------------IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA 197
            YG                 + A VK LA +L +  +RVN +S  G V  ++S    +  
Sbjct: 169 YYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISA-GPVRTLASSGISDFH 227
Query: 198 ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +  +      LR      + +  AALYL +D     TG  + VD G+ V
Sbjct: 228 YILTWNKYNSPLRRNT-TLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 21/235 (8%)
Query: 25  ENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD 79
            NGA++++        +A A ++     G  V  +  D+    +I  L + A    G   
Sbjct: 29  RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADI 88
Query: 80  IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA 139
           ++Y+  G     F   ++    D D    +         + AA  M+ +  G +++  S 
Sbjct: 89  LVYSTGGPRPGRF---MELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSV 145
Query: 140 CTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP--------YGLVSGISSR 191
                        + +  +I +V+ LA EL  +G+ VN V P          L    + R
Sbjct: 146 TLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARR 205
Query: 192 NSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
           + I    +E  L  M +    G+V   E +A+   +LA+++AS +TG  + VDGG
Sbjct: 206 SGIT---VEEALKSMASRIPMGRVGKPEELASVVAFLASEKASFITGAVIPVDGG 257

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	302
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-112
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	3e-94
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-85
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-85
4dqx_A	277	Probable oxidoreductase protein; structural genomi	2e-85
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	9e-85
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-84
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-83
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	2e-81
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	4e-80
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	9e-79
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	2e-78
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-78
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	5e-78
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-76
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-76
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-75
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-75
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	3e-75
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	1e-74
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-74
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	8e-74
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-73
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	5e-72
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	3e-71
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-71
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-71
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-70
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-70
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-70
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	2e-69
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-69
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-68
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	2e-67
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	3e-67
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	8e-67
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-66
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-66
1xhl_A	297	Short-chain dehydrogenase/reductase family member	2e-66
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-66
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	7e-66
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	1e-65
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-65
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-65
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-65
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-65
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	4e-65
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	4e-65
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	8e-65
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	9e-65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	9e-65
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	4e-64
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	9e-64
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-63
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-63
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-63
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-63
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-62
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	3e-62
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-62
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-61
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-61
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-61
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	4e-61
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	7e-61
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	8e-61
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-60
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-60
3imf_A	257	Short chain dehydrogenase; structural genomics, in	3e-60
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	4e-60
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-60
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	8e-60
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	1e-59
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-59
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-59
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	9e-59
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	1e-58
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-58
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-58
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-58
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	4e-58
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-58
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	6e-58
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-57
3cxt_A	291	Dehydrogenase with different specificities; rossma	1e-57
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-57
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-57
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-57
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	6e-57
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	8e-57
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	2e-56
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-56
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	3e-56
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	6e-56
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	3e-55
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-54
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	6e-54
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-53
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	1e-53
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	1e-53
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-53
3rih_A	293	Short chain dehydrogenase or reductase; structural	4e-53
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-53
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	1e-52
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-52
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	4e-52
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-52
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	5e-52
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	5e-52
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-52
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	7e-52
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-52
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	9e-52
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	1e-51
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-51
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-51
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	3e-51
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-51
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	2e-50
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-50
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-50
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	3e-50
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	3e-50
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	7e-50
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	8e-50
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-49
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	3e-49
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	1e-48
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-48
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-48
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-47
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-47
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	3e-47
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	3e-47
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-47
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-47
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	8e-47
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-46
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	4e-46
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-45
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	1e-45
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-45
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-45
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-45
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	8e-45
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	9e-45
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-44
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-44
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-44
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-39
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	4e-44
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	9e-44
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	9e-44
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-43
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-43
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-43
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	4e-43
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	5e-43
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-42
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-42
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	4e-42
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	7e-42
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-41
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	8e-41
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-41
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-39
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-38
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-37
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-36
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	2e-36
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	1e-35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	5e-35
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-34
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	2e-34
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-34
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-33
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-32
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-32
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-32
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-30
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-27
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-27
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-24
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	3e-23
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-21
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	5e-21
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	9e-21
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-20
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-20
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	5e-20
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	5e-20
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	8e-20
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	9e-20
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-19
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	1e-19
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	1e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-14
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	1e-13
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	9e-13
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	2e-09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-09
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	2e-07
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	6e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-05
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	8e-05

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  324 bits (834), Expect = e-112
 Identities = 121/256 (47%), Positives = 168/256 (65%), Gaps = 4/256 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDV 58
           L+ KVAIITGGA GIG   AKLF   GAKVVIAD+ D+ GQ +   +G    + ++HCDV
Sbjct: 14  LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 73

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T ++++ NLVDT +AK+GKLDIM+ N G++     S+L+    D  RV+ +N  G FL A
Sbjct: 74  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 133

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSP-AYTVSKYGIIALVKILAAELRQYGLRVN 177
           KHAARVMIP  KG I+FTAS  +  AG G    YT +K+ ++ L   L  EL +YG+RVN
Sbjct: 134 KHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN 193

Query: 178 CVSPYGLVSGISSR-NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           CVSPY + S + +    ++ + +E    +  NL+G +L AE +A+A  YLA DE+  V+G
Sbjct: 194 CVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG 253

Query: 237 LNLVVDGGFSVANPSL 252
           LNLV+DGG++  NP+ 
Sbjct: 254 LNLVIDGGYTRTNPAF 269

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  278 bits (714), Expect = 3e-94
 Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 13/251 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVA+++GGA G+GA+  +     GAKVV  D+ D  G+A+A +L +   Y+H DVT 
Sbjct: 5   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 64

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             +    VDTAV  +G L ++ NNAGI+     ++ D   ++  R+L VN TG FLG + 
Sbjct: 65  PAQWKAAVDTAVTAFGGLHVLVNNAGIL--NIGTIEDYALTEWQRILDVNLTGVFLGIRA 122

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             + M    +G I+  +S       +    YT +K+ +  L K  A EL   G+RVN + 
Sbjct: 123 VVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH 182

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNL-RGQVLNAEGIANAALYLATDEASDVTGLNL 239
           P            +   + +    ++     G+      ++N  +YLA+DE+S  TG   
Sbjct: 183 PGL----------VKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 232

Query: 240 VVDGGFSVANP 250
           VVDGG      
Sbjct: 233 VVDGGTVAGLA 243

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  256 bits (656), Expect = 1e-85
 Identities = 78/249 (31%), Positives = 122/249 (48%), Gaps = 6/249 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVA++TGGASG+G    KL    GAKV  +D+ +  GQ LA +LGE   ++  DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E + T ++     + G L+++ NNAGI+      +      D  R+L +NT   F+G + 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGIL--LPGDMETGRLEDFSRLLKINTESVFIGCQQ 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL--RQYGLRVNC 178
               M     G I+  AS  + +       Y+ SK  + AL +  A     + Y +RVN 
Sbjct: 122 GIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNS 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVTGL 237
           + P G+ + +   +       E  L +    R G+    E IA   L+LA+DE+S ++G 
Sbjct: 181 IHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGS 240

Query: 238 NLVVDGGFS 246
            L  D    
Sbjct: 241 ELHADNSIL 249

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  257 bits (658), Expect = 1e-85
 Identities = 77/254 (30%), Positives = 118/254 (46%), Gaps = 7/254 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LE KVAIITG   GIG   +++    GA+VV+AD+ +      A  +G    +   D+T+
Sbjct: 9   LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTN 68

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E  +  L+D  +  +G+LDI+ NNA   D     V        D    VN  G  L  K+
Sbjct: 69  EVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   +I    G I+  +SA    A   S AY  +K  I  L + +A +  ++G+R N ++
Sbjct: 129 AIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188

Query: 181 PYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           P GLV        +   I++ F +    G + G+      IA    +LA+D A+ +TG  
Sbjct: 189 P-GLVRTPRLEVGLPQPIVDIFATHHLAGRI-GE---PHEIAELVCFLASDRAAFITGQV 243

Query: 239 LVVDGGFSVANPSL 252
           +  D G     P L
Sbjct: 244 IAADSGLLAHLPGL 257

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  256 bits (657), Expect = 2e-85
 Identities = 89/257 (34%), Positives = 135/257 (52%), Gaps = 14/257 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L  +V I+TGG SGIG A A+LF +NGA VV+ADV ++    +A ++G     +  DV+S
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSS 84

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             +  ++V+   AK+G++D++ NNAG       +V+  P+   DR+++VN  G FL +K+
Sbjct: 85  AKDAESMVEKTTAKWGRVDVLVNNAGFG--TTGNVVTIPEETWDRIMSVNVKGIFLCSKY 142

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
              VM     G I+ T S     A     AY  SK  I +L + +A +  + G+RVN V+
Sbjct: 143 VIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVA 202

Query: 181 PYG-----LVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           P G       + I +       +   F +   M  + G    AE IA A L+LA+D +  
Sbjct: 203 P-GTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRM-GT---AEEIAEAMLFLASDRSRF 257

Query: 234 VTGLNLVVDGGFSVANP 250
            TG  L VDGG S+ N 
Sbjct: 258 ATGSILTVDGGSSIGNH 274

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  255 bits (653), Expect = 9e-85
 Identities = 91/256 (35%), Positives = 134/256 (52%), Gaps = 15/256 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVAI+TG  +GIG A A+   + G  V+ AD+  +   A A K+G        DV+ 
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSD 86

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E +I  +VD  VA +G +D +  NAG+V    AS++DT   D DRV+A+N  G +L  KH
Sbjct: 87  EQQIIAMVDACVAAFGGVDKLVANAGVV--HLASLIDTTVEDFDRVIAINLRGAWLCTKH 144

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AA  MI +  G I+  +S   ++A  G+ AY +SK GII L +I AAELR  G+R N + 
Sbjct: 145 AAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLL 204

Query: 181 PYGLV------SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
           P   V      + ++  +    A     +     G +       E +A   ++L +D+AS
Sbjct: 205 P-AFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRM-AA---PEEMAGIVVFLLSDDAS 259

Query: 233 DVTGLNLVVDGGFSVA 248
            +TG   + DGG   A
Sbjct: 260 MITGTTQIADGGTIAA 275

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  253 bits (648), Expect = 2e-84
 Identities = 85/251 (33%), Positives = 122/251 (48%), Gaps = 9/251 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK  IITGGA G+GA AA+     GA+VV+ADV D  G A A +LG+   Y H DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E++   +V  A  ++G +D + NNAGI       +         +V+ +N TG F+G K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGIS--TGMFLETESVERFRKVVEINLTGVFIGMKT 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
               M     G I+  +SA   +    + +Y  SK+G+  L K+ A EL    +RVN V 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 181 PYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           P    + ++          E       MG +  +      IA A + L +D +S VTG  
Sbjct: 181 PGMTYTPMT--AETGIRQGEGNYPNTPMGRVGNE---PGEIAGAVVKLLSDTSSYVTGAE 235

Query: 239 LVVDGGFSVAN 249
           L VDGG++   
Sbjct: 236 LAVDGGWTTGP 246

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  251 bits (643), Expect = 3e-83
 Identities = 93/269 (34%), Positives = 124/269 (46%), Gaps = 15/269 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           LEGK+AI+TG +SGIG AAA LF   GAKVV+     N    L  ++   G +   +  D
Sbjct: 6   LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGD 65

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V  E     LV+ AV ++G LD  +NNAG +      +           L  N T  FL 
Sbjct: 66  VGDEALHEALVELAVRRFGGLDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLA 124

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           AK+    +     G + FT+S     AG  G   Y  SK G+I LV+ LA EL   G+RV
Sbjct: 125 AKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRV 184

Query: 177 NCVSPYGLVS---GISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
           N + P G        ++     P           +  +  +    E IA AALYLA+D A
Sbjct: 185 NALLP-GGTDTPANFANLPGAAPETRGFVEGLHALKRI-AR---PEEIAEAALYLASDGA 239

Query: 232 SDVTGLNLVVDGGFSVANPSLMKFASPFH 260
           S VTG  L+ DGG SV   +   +    H
Sbjct: 240 SFVTGAALLADGGASVTKAAENLYFQSHH 268

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  246 bits (630), Expect = 2e-81
 Identities = 77/264 (29%), Positives = 130/264 (49%), Gaps = 14/264 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             GKV ++TGG  GIGA   + F  +GA+VVI D  ++ G+AL  +L     +I CDVT 
Sbjct: 7   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG-AVFILCDVTQ 65

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED++  LV   + ++G+LD + NNAG          +T      ++L +N  G +   K 
Sbjct: 66  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKL 124

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   +  + +G ++  +S    I    +  Y  +K  + A+ K LA +   YG+RVNC+S
Sbjct: 125 ALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS 183

Query: 181 PY----GLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDV 234
           P      L   +++      A +   +    +G + GQ      +  AA++LA++ A+  
Sbjct: 184 PGNIWTPLWEELAALMPDPRASIREGMLAQPLGRM-GQ---PAEVGAAAVFLASE-ANFC 238

Query: 235 TGLNLVVDGGFSVANPSLMKFASP 258
           TG+ L+V GG  +        ++P
Sbjct: 239 TGIELLVTGGAELGYGCKASRSTP 262

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  242 bits (620), Expect = 4e-80
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 17/262 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVA+ITG  SG G   AK F + GAKVVI D      + +A ++G+    +  D++ 
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISK 66

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E ++   V+ A++K+GK+DI+ NNAGI  +   +       + DR++ VN  G +L    
Sbjct: 67  EADVDAAVEAALSKFGKVDILVNNAGIGHKP-QNAELVEPEEFDRIVGVNVRGVYLMTSK 125

Query: 121 AARVMIPQHKG----CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
                           IL  AS            Y  +K  ++++ K LA EL    +RV
Sbjct: 126 LIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRV 185

Query: 177 NCVSP----YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDE 230
             ++P      L++     +S    I + F     MG L  +    + +A AA +L + +
Sbjct: 186 VALNPVAGETPLLTTFMGEDS--EEIRKKFRDSIPMGRL-LK---PDDLAEAAAFLCSPQ 239

Query: 231 ASDVTGLNLVVDGGFSVANPSL 252
           AS +TG+ L VDGG S+   S+
Sbjct: 240 ASMITGVALDVDGGRSIGGRSI 261

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  239 bits (612), Expect = 9e-79
 Identities = 71/262 (27%), Positives = 117/262 (44%), Gaps = 20/262 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE-----DVCYIH 55
              +V +ITGG SG+G A A      GAK+ + DV     +A    + E     +V    
Sbjct: 11  FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 70

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV+ E ++   V     ++G++D  +NNAGI  +          ++ D+V+++N  G F
Sbjct: 71  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVF 129

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           LG +   ++M  Q  G ++ TAS            Y  +K+G++ L +  A E  +YG+R
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 189

Query: 176 VNCVSPYGLV-------SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
           +N ++P G +       S             E F+         G+   A  IA    +L
Sbjct: 190 INAIAP-GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRY-GE---APEIAAVVAFL 244

Query: 227 ATDEASDVTGLNLVVDGGFSVA 248
            +D+AS V    + +DGG S A
Sbjct: 245 LSDDASYVNATVVPIDGGQSAA 266

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  237 bits (608), Expect = 2e-78
 Identities = 82/253 (32%), Positives = 127/253 (50%), Gaps = 10/253 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ KV I+TG  SGIG A AK F  N + VV  ++ ++    +  +L   G++V  +  D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ + ++   V      Y ++D++ NNAGI+  G   V +      +RVLAVN    F  
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIM-DGVTPVAEVSDELWERVLAVNLYSAFYS 123

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++    +M+ Q KG I+ TAS      G     YTV+K+G+I L + +AA     G+R  
Sbjct: 124 SRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAV 183

Query: 178 CVSPYGLVSGISSRNS-INPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDV 234
            V P  + + I   +S  +   +      M       +    E IAN  ++LA+DEAS V
Sbjct: 184 AVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAE---PEDIANVIVFLASDEASFV 240

Query: 235 TGLNLVVDGGFSV 247
            G  +VVDGG +V
Sbjct: 241 NGDAVVVDGGLTV 253

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  237 bits (608), Expect = 3e-78
 Identities = 77/254 (30%), Positives = 120/254 (47%), Gaps = 19/254 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              KVAI+TGG+SGIG A        GAKVV   + +     ++        +   DVT+
Sbjct: 12  FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD-------HFKIDVTN 64

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E+E+   V+    KYG++DI+ NNAGI    ++ +  TP     R++ VN  G +L AK+
Sbjct: 65  EEEVKEAVEKTTKKYGRIDILVNNAGIE--QYSPLHLTPTEIWRRIIDVNVNGSYLMAKY 122

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
              VM+    G I+  AS  +  A   + AY  SK+ ++ L + +A +     +R N V 
Sbjct: 123 TIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVC 181

Query: 181 PYGLV------SGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEAS 232
           P G +               +   +E  + E G     G++   E +A    +LA+D +S
Sbjct: 182 P-GTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDRSS 240

Query: 233 DVTGLNLVVDGGFS 246
            +TG  L VDGG  
Sbjct: 241 FITGACLTVDGGLL 254

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  236 bits (606), Expect = 5e-78
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 11/251 (4%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDV 58
            +VAI+TG +SG G A A  F   G +V   D+     +  A        + V  +  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
             E ++   +   + ++G +D++ NNAGI  +     +  TP    D+V+AVN  G FLG
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +     M+ Q  G I+  AS  + +A  G  AYT SK  ++ L K +A +    G+R N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            V P  + + ++      P + +  L+      + G    A  +A+A ++LA ++A+ V 
Sbjct: 182 AVCPGMIETPMTQWRLDQPELRDQVLARIPQKEI-GT---AAQVADAVMFLAGEDATYVN 237

Query: 236 GLNLVVDGGFS 246
           G  LV+DG ++
Sbjct: 238 GAALVMDGAYT 248

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  232 bits (594), Expect = 3e-76
 Identities = 80/253 (31%), Positives = 122/253 (48%), Gaps = 14/253 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDV 58
           L+GKVAIITGG  GIG A A  F E GAKV+I     ++G+  A  +G    + +   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           + ED  T L D     +G +  + NNAGI      SV +T  ++  ++LAVN  G F G 
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIA--VNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 119 KHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL--RQYGLR 175
           +   + M  +  G  I+  +S    +      AY  SK  +  + K  A +   + Y +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           VN V P G +      +        +  ++  MG++ G+      IA   +YLA++E+  
Sbjct: 182 VNTVHP-GYIKTPLVDDLPGAEEAMSQRTKTPMGHI-GE---PNDIAYICVYLASNESKF 236

Query: 234 VTGLNLVVDGGFS 246
            TG   VVDGG++
Sbjct: 237 ATGSEFVVDGGYT 249

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  231 bits (593), Expect = 5e-76
 Identities = 77/255 (30%), Positives = 114/255 (44%), Gaps = 17/255 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             GK  ++TGGA GIG A A+ F   GA V + D++    +           +   D+  
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE---AIGGAFFQVDLED 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E E    V+ A    G++D++ NNA I      S L     +  RVL VN T     +  
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAIA--APGSALTVRLPEWRRVLEVNLTAPMHLSAL 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AAR M     G I+  AS     A   + AY  SK G++ L + LA +L    +RVN V+
Sbjct: 119 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178

Query: 181 PYG-----LVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           P G      V    + +         +     +  L G+    E +A A L+LA+++AS 
Sbjct: 179 P-GAIATEAVLEAIALSPDPERTRRDWEDLHALRRL-GK---PEEVAEAVLFLASEKASF 233

Query: 234 VTGLNLVVDGGFSVA 248
           +TG  L VDGG + +
Sbjct: 234 ITGAILPVDGGMTAS 248

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  231 bits (592), Expect = 1e-75
 Identities = 71/268 (26%), Positives = 114/268 (42%), Gaps = 16/268 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
            + +  ++TGG SGIG   A      GA V+I     +       +L      G  + Y 
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYE 68

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             D+T+EDE    VD   A +G+L  + + AG        +         R + +N  G 
Sbjct: 69  PTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS-ENIGPITQVDSEAWRRTVDLNVNGT 127

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
               KHAAR M+    G  +  +S           AY V+K  +  L+++ A EL    +
Sbjct: 128 MYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWV 187

Query: 175 RVNCVSPYGLV-SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
           RVN + P GL+ + + +  + +  +   +     +    G+V   E +AN A++L +D A
Sbjct: 188 RVNSIRP-GLIRTDLVAAITESAELSSDYAMCTPLPRQ-GEV---EDVANMAMFLLSDAA 242

Query: 232 SDVTGLNLVVDGGFSVAN-PSLMKFASP 258
           S VTG  + VDGG  +   P       P
Sbjct: 243 SFVTGQVINVDGGQMLRRGPDFSAMLEP 270

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  231 bits (592), Expect = 1e-75
 Identities = 74/258 (28%), Positives = 112/258 (43%), Gaps = 13/258 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
               VA+ITG  SGIG A A     +G  V          + +A      G     +  D
Sbjct: 26  QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEAD 85

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ E ++ N V   V K+G LDI+  NAGI    +A + D    + D  +AVN  G FL 
Sbjct: 86  VSDELQMRNAVRDLVLKFGHLDIVVANAGIN-GVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 118 AKHAARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
                  +  +  G I+  +S          G+ AYT +K   +A+V+ LA EL ++ +R
Sbjct: 145 LHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIR 204

Query: 176 VNCVSPYG-----LVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATD 229
           VN V P G     +      R+    AI   +      +  GQ   +E +A    +L ++
Sbjct: 205 VNAVCP-GAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSE 263

Query: 230 EASDVTGLNLVVDGGFSV 247
            A  VTG  + +DGG  +
Sbjct: 264 RARHVTGSPVWIDGGQGL 281

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  230 bits (589), Expect = 3e-75
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 9/250 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L  K+A+ITG  SGIG AAAK F   GA+V I   + ++  A   ++G     I  D  +
Sbjct: 27  LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSAN 86

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             E+  L +   A+ G++D+++ NAG        + +  +   D     N  G     + 
Sbjct: 87  LAELDRLYEKVKAEAGRIDVLFVNAGGGS--MLPLGEVTEEQYDDTFDRNVKGVLFTVQK 144

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A  ++       ++ T S            Y  SK  + +  +    +L+  G+R+N +S
Sbjct: 145 ALPLL--ARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLS 202

Query: 181 PYGLVS--GISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDVTG 236
           P G     G+      +P   +  L+ +      G+V  AE +A AAL+LA+D++S VTG
Sbjct: 203 P-GPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSSFVTG 261

Query: 237 LNLVVDGGFS 246
             L VDGG +
Sbjct: 262 AELFVDGGSA 271

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  228 bits (584), Expect = 1e-74
 Identities = 75/258 (29%), Positives = 119/258 (46%), Gaps = 20/258 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L  KV I+TG + GIG A A+ F + G+KV+   + D               +I CDVT+
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD--------PGEAKYDHIECDVTN 57

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D++   +D    +YG + ++ NNAGI    +  +      +  R++ VN  G +  +K 
Sbjct: 58  PDQVKASIDHIFKEYGSISVLVNNAGIE--SYGKIESMSMGEWRRIIDVNLFGYYYASKF 115

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   MI      I+  +S    I    + AY  SK+ +I L K +A +     LR N V 
Sbjct: 116 AIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVC 174

Query: 181 PYGLV------SGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEAS 232
           P   +               +P  +E  +SE G+     ++   + +A+A  +LA+ EAS
Sbjct: 175 P-ATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASREAS 233

Query: 233 DVTGLNLVVDGGFSVANP 250
            +TG  L VDGG S+  P
Sbjct: 234 FITGTCLYVDGGLSIRAP 251

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  227 bits (580), Expect = 6e-74
 Identities = 79/259 (30%), Positives = 114/259 (44%), Gaps = 16/259 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
             GKV ++TG    IG A A    E G  + + D+     +     +   G +     CD
Sbjct: 5   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VTSE+ +   VD+ V  +GK+D ++NNAG     FA V D P  D  RVL +N TG F  
Sbjct: 65  VTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGAFHV 123

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K  +R MI Q+ G I+ TAS           AY  SK  IIAL +  A +L  Y +RVN
Sbjct: 124 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 183

Query: 178 CVSP----------YGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALY 225
            +SP            +       +       +    +M       +  +   I     +
Sbjct: 184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 243

Query: 226 LATDEASDVTGLNLVVDGG 244
           L  D++S +TG+NL + GG
Sbjct: 244 LLGDDSSFMTGVNLPIAGG 262

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  225 bits (577), Expect = 8e-74
 Identities = 81/256 (31%), Positives = 122/256 (47%), Gaps = 21/256 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKV I+T  A GIG AAA  F   GAKV+  D+ ++  Q L    G        DVT 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT--RVLDVTK 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           + +    +D    +  +LD+++N AG V  G  +VLD  + D D  + +N    +L  K 
Sbjct: 62  KKQ----IDQFANEVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 121 AARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
               M+ Q  G I+  +S  + + G+     Y+ +K  +I L K +AA+  Q G+R NCV
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCV 175

Query: 180 SPYG-----LVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
            P G      +                FL     G        AE IA   +YLA+DE++
Sbjct: 176 CP-GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRF-AT---AEEIAMLCVYLASDESA 230

Query: 233 DVTGLNLVVDGGFSVA 248
            VTG  +++DGG+S+ 
Sbjct: 231 YVTGNPVIIDGGWSLG 246

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  225 bits (576), Expect = 3e-73
 Identities = 74/261 (28%), Positives = 113/261 (43%), Gaps = 20/261 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+VA+ITGGASG+G A    F   GA+V + D      + L    G +   +  DV S
Sbjct: 3   LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRS 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFA---SVLDTPKSDLDRVLAVNTTGGFLG 117
             +     +  +A +GK+D +  NAGI D   A      D   +  D +  VN  G    
Sbjct: 63  LQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K     ++   +G ++FT S        G P YT +K+ ++ LV+ +A EL    +RVN
Sbjct: 123 VKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVN 180

Query: 178 CVSP--------YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLA 227
            V+P             G+S ++  +  + +   S   +G +       E    A ++ A
Sbjct: 181 GVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRM-PA---LEEYTGAYVFFA 236

Query: 228 TDEASD-VTGLNLVVDGGFSV 247
           T   S   TG  L  DGG  V
Sbjct: 237 TRGDSLPATGALLNYDGGMGV 257

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  222 bits (567), Expect = 5e-72
 Identities = 77/254 (30%), Positives = 126/254 (49%), Gaps = 12/254 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ +VAI+TGGA  IG A      E GA+V+IAD+ + +       L   G DV  +  D
Sbjct: 11  LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMD 70

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT+ + + N V +   + G++DI+   AGI         D       + + +N  G F  
Sbjct: 71  VTNTESVQNAVRSVHEQEGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI--GSPAYTVSKYGIIALVKILAAELRQYGLR 175
            +   R+M+ Q +G I+   S    I        AY  SK G+   ++ LAAE   +G+R
Sbjct: 130 CQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIR 189

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
            N V+P  + + ++      P + +A+++   MG + GQ    + +A+   +LA+D AS 
Sbjct: 190 ANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRV-GQP---DEVASVVQFLASDAASL 245

Query: 234 VTGLNLVVDGGFSV 247
           +TG  + VD GF+V
Sbjct: 246 MTGAIVNVDAGFTV 259

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  220 bits (562), Expect = 3e-71
 Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 25/257 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
            EGKVA++TG A GIG A        GA+V +AD     +   L          +  D+ 
Sbjct: 26  FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH---------LPGDLR 76

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
                  L     A  G+LDI+ NNAG++ RG   + +T  +D    L VN    F   +
Sbjct: 77  EAAYADGLPGAVAAGLGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNVEAPFRICR 134

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A  +M     G I+  AS      G G   Y ++K  + +L + +  +    G+R+N V
Sbjct: 135 AAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAV 194

Query: 180 SPYGLV------SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
            P   V      +G + R       +        +G +  +    E IA+  L+LA+D A
Sbjct: 195 CP-NEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRI-AE---PEDIADVVLFLASDAA 249

Query: 232 SDVTGLNLVVDGGFSVA 248
             + G  + V+GG +VA
Sbjct: 250 RYLCGSLVEVNGGKAVA 266

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  219 bits (561), Expect = 4e-71
 Identities = 77/255 (30%), Positives = 121/255 (47%), Gaps = 13/255 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
           L+GK A+ITG   GIGA  A+ F   GA++V++    +   A    L    G DV  +  
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D+   D    L   A   +G LD++ NNAGI       V+DT     D  +AVN     L
Sbjct: 78  DLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPAL 135

Query: 117 GAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            A    + M+     G I+  ASA          AY  SK G++   K+LA EL  +G+R
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
            N V P  +++ +  R   + A     ++   +G           +++A ++LA+D AS 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRF-AVP---HEVSDAVVWLASDAASM 251

Query: 234 VTGLNLVVDGGFSVA 248
           + G+++ VDGG+++ 
Sbjct: 252 INGVDIPVDGGYTMG 266

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  219 bits (560), Expect = 9e-71
 Identities = 75/264 (28%), Positives = 116/264 (43%), Gaps = 16/264 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
              KVAIITG ++GIG A A LF   GAKV I        +    ++       ++V  +
Sbjct: 4   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 63

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTT 112
             DVT++     ++ T + K+GKLDI+ NNAG         +         D  L +N  
Sbjct: 64  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 123

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQ 171
                 K A   +    KG I+  +S  + +      P Y+++K  I    +  A +L Q
Sbjct: 124 SVIALTKKAVPHLS-STKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 182

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-----NAEGIANAALYL 226
           +G+RVN +SP  + +G  S   +     + F S M  ++  V        + IA    +L
Sbjct: 183 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 242

Query: 227 ATDEASD-VTGLNLVVDGGFSVAN 249
           A  + S  + G  LVVDGG S+  
Sbjct: 243 ADRKTSSYIIGHQLVVDGGSSLIM 266

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  218 bits (557), Expect = 2e-70
 Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 20/257 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGK A+ITG A GIG A A+ +   GA V IAD+     +  A ++G     +  DVT 
Sbjct: 6   LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTR 65

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +D I   +   V   G LDI+ NNA + D   A +++  +   +++ A+N  G     + 
Sbjct: 66  QDSIDAAIAATVEHAGGLDILVNNAALFD--LAPIVEITRESYEKLFAINVAGTLFTLQA 123

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           AAR MI Q   G I+  AS            Y  +K  +I+L +    +L ++ + VN +
Sbjct: 124 AARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAI 183

Query: 180 SPYGLV----------SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLA 227
           +P G+V                N                G + G    AE +   A++LA
Sbjct: 184 AP-GVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRM-GT---AEDLTGMAIFLA 238

Query: 228 TDEASDVTGLNLVVDGG 244
           + E+  +      VDGG
Sbjct: 239 SAESDYIVSQTYNVDGG 255

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  217 bits (555), Expect = 3e-70
 Identities = 86/250 (34%), Positives = 123/250 (49%), Gaps = 13/250 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L+GK AIITG  +GIG   A  F   GA VV++D+  +    +     +LG       CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +TSE E++ L D A++K GK+DI+ NNAG          D P +D  R   +N    F  
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGGGGPK---PFDMPMADFRRAYELNVFSFFHL 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++  A  M     G IL   S   E   I   +Y  SK     LV+ +A +L +  +RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            ++P G +   + ++ I P I +  L    +  L GQ    + IANAAL+L +  AS V+
Sbjct: 186 GIAP-GAILTDALKSVITPEIEQKMLQHTPIRRL-GQ---PQDIANAALFLCSPAASWVS 240

Query: 236 GLNLVVDGGF 245
           G  L V GG 
Sbjct: 241 GQILTVSGGG 250

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  216 bits (553), Expect = 3e-70
 Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 29/258 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKLGEDVCYIHCDVT 59
                 ++TGG+ GIG A  +L  +N    VI  D+Q +          E++ +I  D+T
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLT 54

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            + +ITN++D    K    D ++ NAGI+     S+ D     + +VL +N        K
Sbjct: 55  KQQDITNVLDI--IKNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLDLNVWSSIYFIK 110

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                +  +    I+F  S    IA   S AYT+SK  I  + K LA +L +Y +RVN V
Sbjct: 111 GLENNL--KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTV 168

Query: 180 SP---------YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLAT 228
            P           +    ++         +    E  +  +  Q    + IA   ++L +
Sbjct: 169 CPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRI-AQ---PQEIAELVIFLLS 224

Query: 229 DEASDVTGLNLVVDGGFS 246
           D++  +TG  + +DGG++
Sbjct: 225 DKSKFMTGGLIPIDGGYT 242

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  215 bits (550), Expect = 2e-69
 Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 12/252 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           LE KVA++T    GIG A A+   ++GA VV++  +          L   G  V    C 
Sbjct: 12  LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCH 71

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V   ++   LV  AV  +G +DI+ +NA + +  F +++D  +   D++L VN     L 
Sbjct: 72  VGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILHVNVKATVLM 130

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K     M  +  G +L  +S            Y VSK  ++ L K LA EL    +RVN
Sbjct: 131 TKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVN 190

Query: 178 CVSPYGLV-SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDV 234
           C++P GL+ +  S    ++ A  E       +  L G     E  A    +L +++AS +
Sbjct: 191 CLAP-GLIKTNFSQVLWMDKARKEYMKESLRIRRL-GN---PEDCAGIVSFLCSEDASYI 245

Query: 235 TGLNLVVDGGFS 246
           TG  +VV GG +
Sbjct: 246 TGETVVVGGGTA 257

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  216 bits (552), Expect = 2e-69
 Identities = 69/278 (24%), Positives = 116/278 (41%), Gaps = 32/278 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ------------------- 41
           +EGKVA +TG A G G + A    + GA ++  D+   +                     
Sbjct: 9   VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETA 68

Query: 42  ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS 101
            L       +     DV   D +   VD+ V + G+LDI+  NAGI + G  ++  T + 
Sbjct: 69  DLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEE 127

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIA 160
           D   ++ +N  G +   K     MI   + G I+ T+S     A   +  Y  +K+G++ 
Sbjct: 128 DWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVG 187

Query: 161 LVKILAAELRQYGLRVNCVSPYG----LVSGISSRNSINPAI-------LEAFLSEMGNL 209
           L++    EL Q+ +RVN V P      ++    +     P +       +         L
Sbjct: 188 LMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL 247

Query: 210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
               +    I+NA L+ A+DEA  +TG+ L +D G  +
Sbjct: 248 PIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  210 bits (538), Expect = 9e-68
 Identities = 73/248 (29%), Positives = 117/248 (47%), Gaps = 7/248 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            +GK AI+ GG  G+G A  +   E GA+V++    ++    +  + G  V  +  D+  
Sbjct: 6   YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIAD 65

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +EI  L   A    G +D+++ NAG+ +          ++  DR  AVNT G F   + 
Sbjct: 66  LNEIAVLGAAAGQTLGAIDLLHINAGVSE--LEPFDQVSEASYDRQFAVNTKGAFFTVQR 123

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
              ++  +  G I+FT+S   E    G   Y+ SK  +++   +LAAEL   G+RVN VS
Sbjct: 124 LTPLI--REGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVS 181

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDVTGLN 238
           P  + +       I  A    F +   N+    +   A+ +A A L+LA + A+  TG  
Sbjct: 182 PGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFTTGAK 240

Query: 239 LVVDGGFS 246
           L VDGG  
Sbjct: 241 LAVDGGLG 248

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  210 bits (537), Expect = 2e-67
 Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 22/259 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L  KV +I+G    +G   A+   E GA +V+A       + +A      G     +  D
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTD 68

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +T + ++ +LVD  +  YG++D++ NNA  V        +T    +   + +   G    
Sbjct: 69  ITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRL 127

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +     +  + KG ++   S     +     AY ++K  ++A+ + LA EL + G+RVN
Sbjct: 128 IQGFTPALE-ESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVN 186

Query: 178 CVSPYGLV----------SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALY 225
            V P G +                 +    I  A  +   +  L       + +A+A L+
Sbjct: 187 SVLP-GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRL-PT---EDEVASAILF 241

Query: 226 LATDEASDVTGLNLVVDGG 244
           +A+D AS +TG  L V+ G
Sbjct: 242 MASDLASGITGQALDVNCG 260

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  210 bits (537), Expect = 3e-67
 Identities = 75/269 (27%), Positives = 107/269 (39%), Gaps = 25/269 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ----------------ALA 44
           LEG+VA ITG A G G A A      GA ++  D+   L                   L 
Sbjct: 9   LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLV 68

Query: 45  CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
                 +     D    D +  +VD  VA  G+LDI+  NAG+      +  D    D  
Sbjct: 69  EAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA--APQAWDDITPEDFR 126

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVK 163
            V+ +N TG +      A  +I   + G I+  +SA           YT SK+ +  L +
Sbjct: 127 DVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLAR 186

Query: 164 ILAAELRQYGLRVNCVSPYG----LVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAE 217
             AAEL ++ +RVN V P      + SG               LS +    L   V   E
Sbjct: 187 AFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAEPE 246

Query: 218 GIANAALYLATDEASDVTGLNLVVDGGFS 246
            IA+   +LA+DE+  VT   + VD G +
Sbjct: 247 DIADTVCWLASDESRKVTAAQIPVDQGST 275

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  209 bits (534), Expect = 8e-67
 Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 18/258 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA--CKLGEDVCYIHCD 57
           L+G  A++TGG+ GIG A  +     GA+V      +  L + L    + G +V    CD
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           + S  E   L+ T    + GKL+I+ NNAG+V        D  + D + ++  N    + 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHK--EAKDFTEKDYNIIMGTNFEAAYH 136

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            ++ A  ++     G ++F +S     A      Y+ SK  I  + K LA E  +  +RV
Sbjct: 137 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 196

Query: 177 NCVSPYG-----LVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATD 229
           N V+P G     LV     +N      ++ F+ +  MG   G+    + ++    +L   
Sbjct: 197 NSVAP-GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRA-GK---PQEVSALIAFLCFP 251

Query: 230 EASDVTGLNLVVDGGFSV 247
            AS +TG  +  DGGF+ 
Sbjct: 252 AASYITGQIIWADGGFTA 269

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  208 bits (532), Expect = 1e-66
 Identities = 58/254 (22%), Positives = 112/254 (44%), Gaps = 16/254 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---ALACKLGEDVCYIHCD 57
           L+GKVA +TG + GIG A A+ + + GA V I        +    L    G       C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++    +   +      +G +D+   NAG+       +        +++++V+  G +  
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSP--AYTVSKYGIIALVKILAAELRQYGLR 175
           + +  ++     KG ++ T+S   +I  I      Y  +K     L K LA E   +  R
Sbjct: 152 SHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-R 210

Query: 176 VNCVSPYGLV-SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
           VN +SP G + + I+  +  +  +   +     +G   G     + +    LYLA++ ++
Sbjct: 211 VNTISP-GYIDTDIT--DFASKDMKAKWWQLTPLGRE-GLT---QELVGGYLYLASNAST 263

Query: 233 DVTGLNLVVDGGFS 246
             TG ++V+DGG++
Sbjct: 264 FTTGSDVVIDGGYT 277

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  207 bits (530), Expect = 2e-66
 Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 13/254 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALA---CKLGEDVCYIHC 56
           LEGKV +ITG ++G+G + A  F    AKVV+      +   ++     K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+      S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLE--NPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 117 GAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +    KG ++  +S   +I       Y  SK G+  + + LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           VN + P  + + I++    +P       S   MG + G+    E IA  A +LA+ EAS 
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVESMIPMGYI-GE---PEEIAAVAAWLASSEASY 238

Query: 234 VTGLNLVVDGGFSV 247
           VTG+ L  DGG ++
Sbjct: 239 VTGITLFADGGMTL 252

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  208 bits (532), Expect = 2e-66
 Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 14/262 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
             GK  IITG ++GIG +AA +F + GA+V I    ++  +    ++       E +  +
Sbjct: 24  FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 83

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DVT      ++++T +AK+GK+DI+ NNAG       +  D P     +   +N    
Sbjct: 84  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 143

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYG 173
               +     +I   KG I+  +S         G P Y  +K  +    +  A +L Q+G
Sbjct: 144 IEMTQKTKEHLIKT-KGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 202

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-----NAEGIANAALYLA- 227
           +RVN VSP  + +G      +     +   S +G+ +  +        E IAN  ++LA 
Sbjct: 203 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 262

Query: 228 TDEASDVTGLNLVVDGGFSVAN 249
            + +S + G ++V DGG ++  
Sbjct: 263 RNLSSYIIGQSIVADGGSTLVM 284

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  208 bits (531), Expect = 3e-66
 Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 24/267 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ----------------ALA 44
           L+G+VA ITG A G G + A      GA ++  D+   +                   L 
Sbjct: 13  LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLV 72

Query: 45  CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
              G        DV  +  +  LV   + ++G+LD++  NAG++   +  V +      D
Sbjct: 73  EDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL--SWGRVWELTDEQWD 130

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVK 163
            V+ VN TG +   +     MI     G I+  +S+    A  G+  Y+ SK+G+ AL  
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 164 ILAAELRQYGLRVNCVSPYG-----LVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEG 218
            LA EL +YG+RVN + PY      +                     M       + A+ 
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250

Query: 219 IANAALYLATDEASDVTGLNLVVDGGF 245
           +A+   +LA D +  +TG  + VD G 
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGA 277

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  206 bits (526), Expect = 7e-66
 Identities = 78/250 (31%), Positives = 123/250 (49%), Gaps = 13/250 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L   VAI+TG A+GIG A A  F + GA VV+ D++    +A+A  +   G     + C+
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN 69

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT E     ++  A+ ++GK+ ++ NNAG          D P SD +    +N    F  
Sbjct: 70  VTDEQHREAVIKAALDQFGKITVLVNNAGGGGPK---PFDMPMSDFEWAFKLNLFSLFRL 126

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++ AA  M     G IL  +S   E   +   +Y  SK  +  L + +A ++   G+RVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            ++P G +   +    + P I  A L    +G L G+   A+ IANAAL+L +  A+ ++
Sbjct: 187 AIAP-GAIKTDALATVLTPEIERAMLKHTPLGRL-GE---AQDIANAALFLCSPAAAWIS 241

Query: 236 GLNLVVDGGF 245
           G  L V GG 
Sbjct: 242 GQVLTVSGGG 251

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  205 bits (524), Expect = 1e-65
 Identities = 64/264 (24%), Positives = 108/264 (40%), Gaps = 32/264 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           + GKVA++TG A GIG A A+     GAKV + D     G      L      +   +I 
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV  + ++ +     V  +G+LDI+ NNAG+            + + ++ L +N     
Sbjct: 65  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGV----------NNEKNWEKTLQINLVSVI 114

Query: 116 LGAKHAARVMIPQHKG---CILFTASACTEIAGIGSPAYTVSKYGIIALVK--ILAAELR 170
            G       M  Q+ G    I+  +S    +     P Y  SK+GI+   +   LAA L 
Sbjct: 115 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 174

Query: 171 QYGLRVNCVSPYG-----LVSGISSRNSIN--PAILEAFLSEMGNLRGQVLNAEGIANAA 223
             G+R+N + P G     ++  I    ++       +     +      +L+   IAN  
Sbjct: 175 NSGVRLNAICP-GFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYG--ILDPPLIANGL 231

Query: 224 LYLATDEASDVTGLNLVVDGGFSV 247
           + L  D+A  + G  + +     +
Sbjct: 232 ITLIEDDA--LNGAIMKITTSKGI 253

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  205 bits (525), Expect = 2e-65
 Identities = 64/264 (24%), Positives = 112/264 (42%), Gaps = 16/264 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
              K  IITG ++GIG   A LF + GA V I        +     +       + V  +
Sbjct: 4   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 63

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTT 112
             DVT+ED    ++++ + ++GK+D++ NNAG         +  D       + L +N  
Sbjct: 64  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 123

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQ 171
                 K     ++   KG I+  +S             Y ++K  +    +  A +L +
Sbjct: 124 AVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-----NAEGIANAALYL 226
           +G+RVN VSP  + +G ++   +     + F + M + +  +        E IAN  L+L
Sbjct: 183 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 242

Query: 227 ATDEASD-VTGLNLVVDGGFSVAN 249
           A    S  + G ++V DGG S+  
Sbjct: 243 ADRNLSFYILGQSIVADGGTSLVM 266

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  205 bits (523), Expect = 2e-65
 Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 15/252 (5%)

Query: 1   LEGKVAIITGGA-SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED----VCYIH 55
           L+GKV ++T  A +GIG+  A+     GA VVI+D  +        +L +     V  + 
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDVTS + +  L+   V K G+LD++ NNAG+   G   V+D    + DRVL V  T   
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLG--GQTPVVDMTDEEWDRVLNVTLTSVM 137

Query: 116 LGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
              + A R      H G I+  AS     A      Y  +K G++AL +  A E  ++G+
Sbjct: 138 RATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGV 197

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
           R+N VSP  +        + +  +L+   S+   G    +      +A    +LA+D +S
Sbjct: 198 RINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRA-AE---PWEVAATIAFLASDYSS 252

Query: 233 DVTGLNLVVDGG 244
            +TG  + V   
Sbjct: 253 YMTGEVVSVSSQ 264

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  205 bits (524), Expect = 2e-65
 Identities = 85/254 (33%), Positives = 126/254 (49%), Gaps = 17/254 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC---KLGEDVCYIHCD 57
           L GK A+ITG ++GIG   A  + E GA+V +A    +  Q +A     +G     I CD
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT  D++  ++D    + G +DI   NAGIV       LD P  +  R+   N TG FL 
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQAM--LDMPLEEFQRIQDTNVTGVFLT 147

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSP--AYTVSKYGIIALVKILAAELRQYGL 174
           A+ AAR M+ Q   G I+ TAS    I  I      Y  SK  ++ L K +A EL  + +
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
           RVN VSP G +   +            +  +  +G + G+    E +    LYLA+  +S
Sbjct: 208 RVNSVSP-GYIR--TELVEPLADYHALWEPKIPLGRM-GRP---EELTGLYLYLASAASS 260

Query: 233 DVTGLNLVVDGGFS 246
            +TG ++V+DGG++
Sbjct: 261 YMTGSDIVIDGGYT 274

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  205 bits (525), Expect = 3e-65
 Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 34/277 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---------------ALAC 45
           +EGKVA ITG A G G + A      GA ++  DV   L                     
Sbjct: 26  VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVE 85

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
            LG  +     DV   D +   VD  V + G+LDI+  NA +   G   +          
Sbjct: 86  ALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRD 144

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
           ++ VN  G ++ A+ A   ++   + G I+FT+S            Y  SK+G+  L++ 
Sbjct: 145 MIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRT 204

Query: 165 LAAELRQYGLRVNCVSPYG--------------LVSGISSRNSINPAILEAFLSEMGNLR 210
           +A EL    +RVN V P                    + +    +  +    +  +    
Sbjct: 205 MALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPIPY 264

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +      I+NA L+L +D+A  +TG++L VDGG  +
Sbjct: 265 VE---PADISNAILFLVSDDARYITGVSLPVDGGALL 298

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  204 bits (521), Expect = 4e-65
 Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 20/252 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
           L  ++ ++TG + GIG  AA  +   GA V++    +   + +A  +    G    +   
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFIL 69

Query: 57  D--VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           D    + +    L       Y +LD + +NAG++      + +        V+ VN    
Sbjct: 70  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLL-GDVCPMSEQNPQVWQDVMQVNVNAT 128

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           F+  +    +++    G ++FT+S+          AY  SK+    ++++LA E +Q  L
Sbjct: 129 FMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RL 187

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVNC++P G  + +  R S  P        +   L         I    L+L  D++   
Sbjct: 188 RVNCINPGGTRTAM--RASAFPTE------DPQKL-KT---PADIMPLYLWLMGDDSRRK 235

Query: 235 TGLNLVVDGGFS 246
           TG+      G  
Sbjct: 236 TGMTFDAQPGRK 247

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  204 bits (522), Expect = 4e-65
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 9/242 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              K+AI+TG  SG+G A A      G  V +A  + +  Q  A ++G+D   +  DVT 
Sbjct: 26  TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTD 85

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D +  L    V K+G++D+++NNAG        + D   +   +V+  N TG FL  + 
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTG-APAIPMEDLTFAQWKQVVDTNLTGPFLCTQE 144

Query: 121 AARVMIPQHK--GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           A RVM  Q    G I+   S         S  YT +K+ I  L K  + + R + +    
Sbjct: 145 AFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQ 204

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD-EASDVTGL 237
           +      + ++ +  +   + +A LS        V++   +A+A +Y+A+    ++V  +
Sbjct: 205 IDIGNADTPMAQK--MKAGVPQADLSIK---VEPVMDVAHVASAVVYMASLPLDANVQFM 259

Query: 238 NL 239
            +
Sbjct: 260 TI 261

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  203 bits (519), Expect = 8e-65
 Identities = 77/252 (30%), Positives = 119/252 (47%), Gaps = 12/252 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVT 59
           L+G  A +TG  SGIG    + F  +GA++++ D +       A +L       I  DVT
Sbjct: 9   LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT 68

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
             + +T            + I+ N+AGI     A  L+T  +   +V+AVN  G F  ++
Sbjct: 69  DAEAMTAAAA-EAEAVAPVSILVNSAGIARLHDA--LETDDATWRQVMAVNVDGMFWASR 125

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGIIALVKILAAELRQYGLRVN 177
              R M+ +  G I+   S    I        +Y  SK  +  L + LAAE    G+RVN
Sbjct: 126 AFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            ++P  + + ++ +    P + E +L    MG   G+      IA AAL+LA+  AS VT
Sbjct: 186 ALAPGYVATEMTLKMRERPELFETWLDMTPMGRC-GEP---SEIAAAALFLASPAASYVT 241

Query: 236 GLNLVVDGGFSV 247
           G  L VDGG++V
Sbjct: 242 GAILAVDGGYTV 253

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  203 bits (518), Expect = 9e-65
 Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 16/254 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
            E KV I+TG   GIG A A+     GA VV+AD+     +A+A ++   G     +  D
Sbjct: 7   FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFL 116
           V+  +    + D  +A++G +D + NNA I        +L        + ++VN  G   
Sbjct: 67  VSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALW 126

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             +   + M  +  G I+  +S     A  + S  Y ++K GI  L + L+ EL    +R
Sbjct: 127 CTRAVYKKMTKRGGGAIVNQSS----TAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIR 182

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           +N ++P G +   ++R +    +++  +    +  + G     + +    L+L +DEAS 
Sbjct: 183 INAIAP-GPIDTEANRTTTPKEMVDDIVKGLPLSRM-GT---PDDLVGMCLFLLSDEASW 237

Query: 234 VTGLNLVVDGGFSV 247
           +TG    VDGG  +
Sbjct: 238 ITGQIFNVDGGQII 251

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  203 bits (519), Expect = 9e-65
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK  ++TG ASGIG AA  LF   GA +V  D ++ L       L  +   +  DV+ 
Sbjct: 4   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +  +   A+ ++G+L  + + AG+     A   + P    ++VL VN TG FL A+ 
Sbjct: 64  PKAVEAVFAEALEEFGRLHGVAHFAGVA--HSALSWNLPLEAWEKVLRVNLTGSFLVARK 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQYGLRVN 177
           A  V+  +  G ++ T S    +AG+G+     Y   K G++ L + LA EL + G+RVN
Sbjct: 122 AGEVL--EEGGSLVLTGS----VAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVN 175

Query: 178 CVSPYGLVSGISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
            + P GL   I +     + P   E  +    +G   G+    E +A AAL+L ++E++ 
Sbjct: 176 VLLP-GL---IQTPMTAGLPPWAWEQEVGASPLGRA-GR---PEEVAQAALFLLSEESAY 227

Query: 234 VTGLNLVVDGGFSVANPSLMKFA 256
           +TG  L VDGG S+  P  +   
Sbjct: 228 ITGQALYVDGGRSIVGPPGLPPG 250

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  202 bits (516), Expect = 4e-64
 Identities = 66/284 (23%), Positives = 106/284 (37%), Gaps = 43/284 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---------------ALAC 45
           ++ KV ++TGGA G G + A    E GA +++ D+  ++                     
Sbjct: 8   VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVE 67

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           K G        DV     ++  +  AVA++GKLD++  NAGI   G       P      
Sbjct: 68  KTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG----AHLPVQAFAD 123

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS-----------ACTEIAGIGSPAYTVS 154
              V+  G       A   +       I+ T S                 G G   Y+ +
Sbjct: 124 AFDVDFVGVINTVHAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYA 181

Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYG---------LVSGISSRNSINPAILEAFLSE 205
           K  + +    LAA+L    +R N + P            +      +   P+  +A L+ 
Sbjct: 182 KQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF 241

Query: 206 --MGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             M  +    + A  I+NA  +LA+DE+  VTGL   VD G  +
Sbjct: 242 PAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAML 285

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  200 bits (511), Expect = 9e-64
 Identities = 63/248 (25%), Positives = 110/248 (44%), Gaps = 14/248 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+  ++TG   GIG    +  H  GA+VV          +L  +    +  +  D+  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLV-RECPGIEPVCVDLGD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +      + A+   G +D++ NNA +        L+  K   DR   VN       ++ 
Sbjct: 64  WEA----TERALGSVGPVDLLVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR +I +   G I+  +S C++ A      Y  +K  +  L K++A EL  + +RVN V
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177

Query: 180 SPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           +P  +++ +      +P   +  L+   +G    +V   E + NA L+L +D +   TG 
Sbjct: 178 NPTVVMTSMGQATWSDPHKAKTMLNRIPLGKF-AEV---EHVVNAILFLLSDRSGMTTGS 233

Query: 238 NLVVDGGF 245
            L V+GGF
Sbjct: 234 TLPVEGGF 241

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  200 bits (512), Expect = 1e-63
 Identities = 73/257 (28%), Positives = 115/257 (44%), Gaps = 18/257 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+ AI+TGG+ GIGAA A+   + GA V IAD+     QA+   L      +  DVT 
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTK 69

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +   +  A+   G  D++  NAG+        +D    + D    VN  G FL  + 
Sbjct: 70  RASVDAAMQKAIDALGGFDLLCANAGVST--MRPAVDITDEEWDFNFDVNARGVFLANQI 127

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           A R  +    KG I+ TAS   ++       Y+ SK+ +    + LA E+    +RVNCV
Sbjct: 128 ACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCV 187

Query: 180 SP---------YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLAT 228
            P           ++     R     A+   ++S   +G +  +    E +A+  ++LA+
Sbjct: 188 CPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRI-EE---PEDVADVVVFLAS 243

Query: 229 DEASDVTGLNLVVDGGF 245
           D A  +TG  + V GG 
Sbjct: 244 DAARFMTGQGINVTGGV 260

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  200 bits (510), Expect = 1e-63
 Identities = 64/251 (25%), Positives = 113/251 (45%), Gaps = 14/251 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             G  A++TG   GIG    K  H +GAKVV     ++   +LA K    +  +  D+  
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLA-KECPGIEPVCVDLGD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D      + A+   G +D++ NNA +V       L+  K   DR  +VN    F  ++ 
Sbjct: 64  WDA----TEKALGGIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQM 117

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR MI +   G I+  +S    +       Y+ +K  +  L K +A EL  + +RVN V
Sbjct: 118 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 177

Query: 180 SPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           +P  +++ +  + S +P           +     +V   E + N+ L+L +D ++  +G 
Sbjct: 178 NPTVVLTDMGKKVSADPEFARKLKERHPLRKF-AEV---EDVVNSILFLLSDRSASTSGG 233

Query: 238 NLVVDGGFSVA 248
            ++VD G+  +
Sbjct: 234 GILVDAGYLAS 244

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  199 bits (508), Expect = 4e-63
 Identities = 57/260 (21%), Positives = 94/260 (36%), Gaps = 17/260 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           L   VA++TGG+SGIG A  +L  E GA V          +A    L     G  +    
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASV 65

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV    ++    +      G   I+ NNAG      ++  +T        L +      
Sbjct: 66  CDVLDALQVRAFAEACERTLGCASILVNNAGQG--RVSTFAETTDEAWSEELQLKFFSVI 123

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              +     +  +    I+   S           A + ++ G+  LV+ +A E    G+R
Sbjct: 124 HPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVR 183

Query: 176 VNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQVLN----AEGIANAALYL 226
           VN +   GLV                     + +++   +   L         A A L+L
Sbjct: 184 VNGILI-GLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL 242

Query: 227 ATDEASDVTGLNLVVDGGFS 246
           A+  ++  TG ++ V GG S
Sbjct: 243 ASPLSAYTTGSHIDVSGGLS 262

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  197 bits (504), Expect = 8e-63
 Identities = 45/249 (18%), Positives = 92/249 (36%), Gaps = 15/249 (6%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
            +A++T      G AA +   ++G  VV  D              E+         +E +
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP---GTIALAEQK 58

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
              LVD  +     +D + +N  I        +  T ++D+ ++    +    L  + A 
Sbjct: 59  PERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAI 118

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
             +       ++F  S+  +     +P Y  ++   +ALV+  A  L + G+ +  + P 
Sbjct: 119 APLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGP- 177

Query: 183 GLV----SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTG 236
                     +S    NP + E    +  +G L G+    + +     +LA+  A+ + G
Sbjct: 178 NFFNNPTYFPTSDWENNPELRERVDRDVPLGRL-GR---PDEMGALITFLASRRAAPIVG 233

Query: 237 LNLVVDGGF 245
                 GG+
Sbjct: 234 QFFAFTGGY 242

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  198 bits (506), Expect = 1e-62
 Identities = 74/271 (27%), Positives = 120/271 (44%), Gaps = 32/271 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---------------ALAC 45
           L GKVA ITG A G G A A     +GA ++  D+ D +                  L  
Sbjct: 11  LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVE 70

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
            +G  +     DV   + ++  +   + + G+LDI+  NAGI      + +         
Sbjct: 71  DIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI------APMSAGDDGWHD 124

Query: 106 VLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASAC----TEIAGIGSPAYTVSKYGIIA 160
           V+ VN TG +   K A   ++ Q   G I+  +S+        A  GS  Y  +K+G++ 
Sbjct: 125 VIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVG 184

Query: 161 LVKILAAELRQYGLRVNCVSPYG----LVSGISSRNSINPAIL-EAFLSEMGN-LRGQVL 214
           L+++ A  L    +RVN + P G    +++   +R  +            MGN +  +VL
Sbjct: 185 LMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMPVEVL 244

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGF 245
             E +ANA  +L +D+A  +TG+ L VD GF
Sbjct: 245 APEDVANAVAWLVSDQARYITGVTLPVDAGF 275

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  196 bits (501), Expect = 3e-62
 Identities = 65/254 (25%), Positives = 110/254 (43%), Gaps = 12/254 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVT 59
           L+GK A++TG  SGIG   A++    GA +V+    D     A   + G    +   D++
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              +I  L   A  ++G +DI+ NNAGI  +  A V   P    D+++A+N +  F G +
Sbjct: 62  DVAQIEALFALAEREFGGVDILVNNAGI--QHVAPVEQFPLESWDKIIALNLSAVFHGTR 119

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A   M  ++ G I+  AS    +   G  AY  +K+G++ L K++  E     +  N +
Sbjct: 120 LALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAI 179

Query: 180 SP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
            P           +   ++            L+E        +  E +    L+L ++  
Sbjct: 180 CPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGELVLFLCSEAG 238

Query: 232 SDVTGLNLVVDGGF 245
           S V G    VDGG+
Sbjct: 239 SQVRGAAWNVDGGW 252

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  195 bits (499), Expect = 6e-62
 Identities = 71/248 (28%), Positives = 113/248 (45%), Gaps = 9/248 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK-LGEDVCYIHCDVT 59
           L+ K+A+ITGGA+GIG A A+ F   GA + IAD+        A + LG  V  + CDV+
Sbjct: 5   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 64

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              ++       ++ +G+ DI+ NNAGI         +       +   +N   GFL AK
Sbjct: 65  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVDSGFLMAK 122

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                M     G I+   S    +       Y  +K   I   + LA++L + G+ VN +
Sbjct: 123 AFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAI 182

Query: 180 SPYGLVSGISSR--NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           +P  L   + +    +   + +   L  M     ++     +  AA +LA+D+AS +TG 
Sbjct: 183 AP-SL---VRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ 238

Query: 238 NLVVDGGF 245
            L VDGG 
Sbjct: 239 TLAVDGGM 246

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  194 bits (496), Expect = 2e-61
 Identities = 63/252 (25%), Positives = 109/252 (43%), Gaps = 23/252 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            + KV +ITG + GIGA   + + +   +VV                  D+  +  D++ 
Sbjct: 26  NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSI------KPSADPDIHTVAGDISK 79

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +    +V   + ++G++D + NNAG+        ++  + D D  L VN  G F   + 
Sbjct: 80  PETADRIVREGIERFGRIDSLVNNAGVFLAK--PFVEMTQEDYDHNLGVNVAGFFHITQR 137

Query: 121 AARVMIPQHKGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           AA  M+ Q  G I+   +      + G+ S   +++K G+ A+ + LA E  + G+RVN 
Sbjct: 138 AAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNA 197

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           VSP     G+                   +G + G+      + +A LYL  + A  +TG
Sbjct: 198 VSP-----GVIKTPMHPAETHSTLAGLHPVGRM-GE---IRDVVDAVLYL--EHAGFITG 246

Query: 237 LNLVVDGGFSVA 248
             L VDGG +  
Sbjct: 247 EILHVDGGQNAG 258

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  194 bits (495), Expect = 2e-61
 Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 20/243 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED------VCYI 54
           L+G+V ++TG A GIGAAAA+ +  +GA VV+    +     ++ ++         +  +
Sbjct: 12  LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIAL 71

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           + +  +  +   L      ++G+LD + +NA I+      +   P  D  +V+ VN    
Sbjct: 72  NLENATAQQYRELAARVEHEFGRLDGLLHNASII-GPRTPLEQLPDEDFMQVMHVNVNAT 130

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR-QYG 173
           F+  +    ++       I FT+S+          AY VSK+    L++ LA EL     
Sbjct: 131 FMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTA 190

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           +R N ++P G                +A+  E           E I    LYL   +++ 
Sbjct: 191 VRANSINP-GATR--------TGMRAQAYPDENPLNNPA---PEDIMPVYLYLMGPDSTG 238

Query: 234 VTG 236
           + G
Sbjct: 239 ING 241

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  195 bits (497), Expect = 3e-61
 Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 15/252 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
            EG++A++TGG +G+G   A+     G  VVI   + ++  A A ++    G  V  + C
Sbjct: 31  GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVC 90

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV   D++  L     A++ +LD++ NNAG  +     + +      + ++A N TG FL
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 117 GAKHAARVMIPQHK--GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
             +HA R+M  Q    G I+   S   +     S  YT +K+ I  L K  A + R + +
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEAS- 232
               +   G          +   +    L   G +     +  E IA A +Y+A+   S 
Sbjct: 210 ACGQIDI-GNA-----ATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYMASLPLSA 263

Query: 233 DVTGLNLVVDGG 244
           +V  + ++    
Sbjct: 264 NVLTMTVMATRM 275

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  194 bits (496), Expect = 4e-61
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 19/261 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-----LGQALACKLGEDVCYIH 55
           +  K A+ITG  SGIG A A+   + GA +V+           +   +A      V +  
Sbjct: 23  MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHP 82

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D+T   EI +++     ++G  DI+ NNAG+  +    + D P    DR++AVN +  F
Sbjct: 83  ADMTKPSEIADMMAMVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSF 140

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              + A   M  +  G I+  ASA   +A     AY  +K+GI+ L K +A E+ + G+ 
Sbjct: 141 HTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVT 200

Query: 176 VNCVSP--------YGLVSGISSRNSINP--AILEAFLSEMGNLRGQVLNAEGIANAALY 225
           VN + P           +   +    I     I E  L        + +  E +A+ ALY
Sbjct: 201 VNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT--KKFITVEQVASLALY 258

Query: 226 LATDEASDVTGLNLVVDGGFS 246
           LA D+A+ +TG ++ +DGG++
Sbjct: 259 LAGDDAAQITGTHVSMDGGWT 279

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  193 bits (494), Expect = 7e-61
 Identities = 66/258 (25%), Positives = 97/258 (37%), Gaps = 28/258 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYI------ 54
           L GK   ITG + GIG A A     +GA V IA         L   +      +      
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63

Query: 55  ----HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
                CD+  ED++   V   V  +G +DI+ NNA  +       LDTP    D +  VN
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW--LRGTLDTPMKRFDLMQQVN 121

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI--GSPAYTVSKYGIIALVKILAAE 168
             G F+ A+     ++      IL  A   +           YT++K G+  +   LAAE
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS-EMGNLRGQVLNAEGIANAALYLA 227
               G+ +N + P         R  I    +      +    R      E +A+AA  + 
Sbjct: 182 FGPQGVAINALWP---------RTVIATDAINMLPGVDAAACR----RPEIMADAAHAVL 228

Query: 228 TDEASDVTGLNLVVDGGF 245
           T EA+   G  L+ D   
Sbjct: 229 TREAAGFHGQFLIDDEVL 246

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  193 bits (492), Expect = 8e-61
 Identities = 80/259 (30%), Positives = 125/259 (48%), Gaps = 19/259 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-----NLGQALACKLGEDVCYIH 55
           L+GKVA++TG  SGIG   A      GA +V+    D      +   LA + G  V Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++  + +  LVD AV + G++DI+ NNAGI  +  A + D P    D +LA+N +  F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAVF 119

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            G   A   M  Q  G I+  ASA   +A     AY  +K+G++   K+ A E    G+ 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 176 VNCVSP--------YGLVSGISSRNSINP--AILEAFLSEMGNLRGQVLNAEGIANAALY 225
            N + P           +S ++ +N ++   A  E    +  +   Q +  E +   A++
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS--LQFVTPEQLGGTAVF 237

Query: 226 LATDEASDVTGLNLVVDGG 244
           LA+D A+ +TG  + VDGG
Sbjct: 238 LASDAAAQITGTTVSVDGG 256

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  192 bits (491), Expect = 1e-60
 Identities = 72/258 (27%), Positives = 102/258 (39%), Gaps = 23/258 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             GK   +TG   GIG A A  F E GAKV   D           +          DV  
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT-------QEQYPFATEVMDVAD 57

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             ++  +    +A+  +LD + N AGI+  G  +     K D  +  AVN  G F   + 
Sbjct: 58  AAQVAQVCQRLLAETERLDALVNAAGILRMG--ATDQLSKEDWQQTFAVNVGGAFNLFQQ 115

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
                  Q  G I+  AS       IG  AY  SK  + +L   +  EL   G+R N VS
Sbjct: 116 TMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVS 175

Query: 181 P--------YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDE 230
           P          L     +         E F     +G +  +    + IAN  L+LA+D 
Sbjct: 176 PGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKI-AR---PQEIANTILFLASDL 231

Query: 231 ASDVTGLNLVVDGGFSVA 248
           AS +T  ++VVDGG ++ 
Sbjct: 232 ASHITLQDIVVDGGSTLG 249

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  192 bits (491), Expect = 2e-60
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 17/257 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA--CKLGEDVCYIHCD 57
           LEG  A++TGG+ GIG    +     GA V      Q  L   L      G  V    CD
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 66

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           ++S  E   L++T    + GKL+I+ NNAGIV        D    D   ++++N    + 
Sbjct: 67  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYK--EAKDYTVEDYSLIMSINFEAAYH 124

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            +  A   +    +G ++F +S    +A      Y  +K  +  L + LA E  +  +RV
Sbjct: 125 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 184

Query: 177 NCVSPYGLV----SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDE 230
           N V P G++      ++ ++      L   +    +  + G+    + +A    +L    
Sbjct: 185 NGVGP-GVIATSLVEMTIQDPEQKENLNKLIDRCALRRM-GEP---KELAAMVAFLCFPA 239

Query: 231 ASDVTGLNLVVDGGFSV 247
           AS VTG  + VDGG   
Sbjct: 240 ASYVTGQIIYVDGGLMA 256

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  191 bits (488), Expect = 3e-60
 Identities = 72/253 (28%), Positives = 124/253 (49%), Gaps = 16/253 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           ++ KV IITGG+SG+G   A  F + GA+VVI        +    ++      +  +  D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V + D+I  +++    K+G++DI+ NNA           D   +  + V+ +   G F  
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYC 121

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL-RQYGLR 175
           ++   +  I +  KG I+   +     AG G      +K G++A+ K LA E  R+YG+R
Sbjct: 122 SQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIR 181

Query: 176 VNCVSPYGLV--SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
           VN ++P G +  +G + +  I+  + +  +    +G L G     E IA  A YL +DEA
Sbjct: 182 VNAIAP-GPIERTGGADKLWISEEMAKRTIQSVPLGRL-GTP---EEIAGLAYYLCSDEA 236

Query: 232 SDVTGLNLVVDGG 244
           + + G  + +DGG
Sbjct: 237 AYINGTCMTMDGG 249

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  191 bits (488), Expect = 4e-60
 Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 22/261 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
              K  I+TGG  GIG A  +     GA V +          +  K+    G       C
Sbjct: 12  FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 71

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV++ D +T  +    A  G +  +  NAG+     A   +    D   V  VN  G F 
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPA--TELTHEDFAFVYDVNVFGVFN 129

Query: 117 GAKHAARVMIP-QHKGCILFTASACTEIA-------GIGSPAYTVSKYGIIALVKILAAE 168
             +  A++ +  Q KG I+ T+S  ++I         +    Y  SK     LVK LAAE
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
               G+RVN +SP  + +  ++   ++  I +   S   +     Q    E +   A+ L
Sbjct: 190 WASAGIRVNALSPGYVNTDQTA--HMDKKIRDHQASNIPLNRF-AQ---PEEMTGQAILL 243

Query: 227 ATDEASDVTGLNLVVDGGFSV 247
            +D A+ +TG    +DGG  +
Sbjct: 244 LSDHATYMTGGEYFIDGGQLI 264

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  192 bits (490), Expect = 5e-60
 Identities = 82/287 (28%), Positives = 128/287 (44%), Gaps = 26/287 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD--------VQDNLGQALACKLGEDVC 52
           L+G+VAI+TGGA+GIG A  K   E G+ VVIA           D L   L       V 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS-VLDTPKSDLDRVLAVNT 111
            I C++ +E+E+ NLV + +  +GK++ + NN G     F S            VL  N 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG---QFLSPAEHISSKGWHAVLETNL 132

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
           TG F   K      + +H G I+      T+     +     ++ G+  L K LA E   
Sbjct: 133 TGTFYMCKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWAC 191

Query: 172 YGLRVNCVSPYGLV---SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
            G+R+NCV+P G++   + + +  S   +  E    +     + G     E +++   +L
Sbjct: 192 SGIRINCVAP-GVIYSQTAVENYGSWGQSFFEGSFQKIPAKRI-GVP---EEVSSVVCFL 246

Query: 227 ATDEASDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFL 273
            +  AS +TG ++ VDGG S+   S   +  P H     G G  S +
Sbjct: 247 LSPAASFITGQSVDVDGGRSLYTHS---YEVPDHDNWPKGAGDLSVV 290

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  190 bits (486), Expect = 8e-60
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 28/261 (10%)

Query: 1   LEGKVAIITG--GASGIGAAAAKLFHENGAKVVIADVQ-----DNLGQALACKLGEDVCY 53
           L+GKV ++TG  G  G+G  AA+   E GA V I         +   + L    G     
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
             C V S +    LV   VA +G++D    NAG         LD      + V+ V+  G
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGI--LDGSVEAWNHVVQVDLNG 135

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGI------GSPAYTVSKYGIIALVKILAA 167
            F  AK        +  G ++ TAS    ++G          +Y V+K G I + + LA 
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITAS----MSGHIANFPQEQTSYNVAKAGCIHMARSLAN 191

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALY 225
           E R +  RVN +SP  + +G+S  + +     + + S   MG   G     + +  A +Y
Sbjct: 192 EWRDFA-RVNSISPGYIDTGLS--DFVPKETQQLWHSMIPMGRD-GLA---KELKGAYVY 244

Query: 226 LATDEASDVTGLNLVVDGGFS 246
            A+D ++  TG +L++DGG++
Sbjct: 245 FASDASTYTTGADLLIDGGYT 265

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  190 bits (485), Expect = 1e-59
 Identities = 66/257 (25%), Positives = 114/257 (44%), Gaps = 24/257 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L GK A++TG A G+G A A+     GA+V++ D++  L         + G D   +  D
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD 66

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT E  I        A+   +DI+ NNAGI  R    +++    +  +V+  N T  FL 
Sbjct: 67  VTDELAIEAAFSKLDAEGIHVDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLV 124

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
           ++ AA+ MI +   G I+   S  ++ A      YT +K GI  L   +AAE  Q+ ++ 
Sbjct: 125 SRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQT 184

Query: 177 NCVSPYG-----LVSGISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALYLAT 228
           N + P G     + + +      +  +                +    E +   A++L++
Sbjct: 185 NAIGP-GYILTDMNTALIEDKQFDSWVKS---------STPSQRWGRPEELIGTAIFLSS 234

Query: 229 DEASDVTGLNLVVDGGF 245
             +  + G  + VDGG+
Sbjct: 235 KASDYINGQIIYVDGGW 251

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  189 bits (483), Expect = 2e-59
 Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 18/259 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQA---LACKLGEDVCYIHC 56
           + GKVA+ITG +SGIG A A+ F + GA +V+     D L +A   L  K G  V  +  
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAV 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV + + +  +V++  + +G  DI+ NNAG       ++++           +       
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNE--TIMEAADEKWQFYWELLVMAAVR 122

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            A+     M  +  G I+  AS C        P Y V+K  ++   K LA E+ +  +RV
Sbjct: 123 LARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRV 182

Query: 177 NCVSPYGLV----------SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           NC++P GL+                       L++   E   +  +  + E +AN  ++L
Sbjct: 183 NCINP-GLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFVFL 240

Query: 227 ATDEASDVTGLNLVVDGGF 245
            ++ A+   G    VDGG 
Sbjct: 241 CSERATYSVGSAYFVDGGM 259

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  189 bits (482), Expect = 4e-59
 Identities = 72/260 (27%), Positives = 111/260 (42%), Gaps = 17/260 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQA---LACKLGEDVCYIHC 56
           L  KVA ITGG SGIG   A++F  +G   VIA      +  A   LA   G     +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFAS-VLDTPKSDLDRVLAVNTTGGF 115
           DV +   +   VD A+ ++G++DI+ N A      F         +    V+ ++T+G F
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAG---NFLCPAGALSFNAFKTVMDIDTSGTF 141

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             ++         H G I+   +               +K  + A+ + LA E     +R
Sbjct: 142 NVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIR 201

Query: 176 VNCVSPYGLV--SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
           VN ++P G +  +    R     A L   ++   +  L G       IA++ LYLA+  A
Sbjct: 202 VNSLAP-GPISGTEGLRRLGGPQASLSTKVTASPLQRL-GNK---TEIAHSVLYLASPLA 256

Query: 232 SDVTGLNLVVDGGFSVANPS 251
           S VTG  LV DGG  +  P+
Sbjct: 257 SYVTGAVLVADGGAWLTFPN 276

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  189 bits (483), Expect = 9e-59
 Identities = 69/274 (25%), Positives = 112/274 (40%), Gaps = 29/274 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---------------ALAC 45
           L+GKVA ITG A G G   A    ++GA +V  D+                      L  
Sbjct: 44  LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVE 103

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           + G  +     DV     +  +VD A+A++G +DI+ +N GI       V+         
Sbjct: 104 EQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGIS--NQGEVVSLTDQQWSD 161

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKI 164
           +L  N  G +   +     MI + + G ++F +S        G   Y  SK+G+  L+  
Sbjct: 162 ILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLS 221

Query: 165 LAAELRQYGLRVNCVSPYG----LVSGISSRNSINPAI-------LEAFLSEMGNLRGQV 213
           LA E+ ++ +RVN V+P      +           P +            S++  L    
Sbjct: 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW 281

Query: 214 LNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +  E ++NA  +LA+DEA  + G  + VDGG   
Sbjct: 282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  189 bits (482), Expect = 1e-58
 Identities = 74/280 (26%), Positives = 109/280 (38%), Gaps = 18/280 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHC 56
            +GKVA ITGG +G+G     L    GA+ VIA    DV     + ++ + G  V  I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV   D + N V   +   G  +I+ NNA       +       +    +  +   G   
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAF 141

Query: 117 GAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
                 + +I   K    L   +   E           +K G+ A+ K LAAE  +YG+R
Sbjct: 142 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 201

Query: 176 VNCVSPYGLV--SGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
            N + P G +   G  SR        +  +     G L G V   E +AN A +L +D A
Sbjct: 202 FNVIQP-GPIKTKGAFSRLDPTGTFEKEMIGRIPCGRL-GTV---EELANLAAFLCSDYA 256

Query: 232 SDVTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRS 271
           S + G  +  DGG  V      +F     + K   D    
Sbjct: 257 SWINGAVIKFDGGEEVLISG--EFNDLRKVTKEQWDTIEE 294

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  187 bits (478), Expect = 1e-58
 Identities = 68/259 (26%), Positives = 112/259 (43%), Gaps = 21/259 (8%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC-----KLGEDVCYIHCD 57
            KVA++TGGA GIG   ++    +G  + +AD+     QA           +   ++  D
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VT +    + +D A  K G  D++ NNAGI       +L+  + DL ++ +VN    F G
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIK--PLLEVTEEDLKQIYSVNVFSVFFG 119

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            + A+R       KG I+  AS           AY+ +K+ +  L +  A EL   G  V
Sbjct: 120 IQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179

Query: 177 NCVSPYGLVSG----------ISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL 226
           N  +P G+V                        + + S +    G+    E +A    +L
Sbjct: 180 NAYAP-GIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI--ALGRPSVPEDVAGLVSFL 236

Query: 227 ATDEASDVTGLNLVVDGGF 245
           A++ ++ VTG  ++VDGG 
Sbjct: 237 ASENSNYVTGQVMLVDGGM 255

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  187 bits (478), Expect = 2e-58
 Identities = 57/256 (22%), Positives = 93/256 (36%), Gaps = 24/256 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYI------ 54
           L GK   I+GG+ GIG A AK    +GA V +          L   +      I      
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66

Query: 55  ----HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
                 D+   D +   V   V ++G +DI  NNA  ++    S+ + P    D +  + 
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGIQ 124

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAEL 169
             G +  ++     M  +    IL  +              Y ++KYG+      +A EL
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 170 RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
           R  G+  N + P   V+  + +N +           M   R      E  A+AA  +   
Sbjct: 185 RDAGIASNTLWPRTTVATAAVQNLLGGDEA------MARSR----KPEVYADAAYVVLNK 234

Query: 230 EASDVTGLNLVVDGGF 245
            +S  TG  L+ +   
Sbjct: 235 PSS-YTGNTLLCEDVL 249

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  186 bits (475), Expect = 3e-58
 Identities = 67/255 (26%), Positives = 109/255 (42%), Gaps = 17/255 (6%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCDVTS 60
           KVA++TG   GIG A A    ++G  V IAD  D   +A+A    + G     +  DV+ 
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D++   V+ A    G  D++ NNAG+       +       +D+V  +N  G   G + 
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP--STPIESITPEIVDKVYNINVKGVIWGIQA 120

Query: 121 AARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           A      + H G I+   S    +       Y+ SK+ +  L +  A +L   G+ VN  
Sbjct: 121 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 180

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNA---------EGIANAALYLATDE 230
            P G+V        I+  + EA    +G    +             E +A    YLA+ +
Sbjct: 181 CP-GIVKT-PMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 238

Query: 231 ASDVTGLNLVVDGGF 245
           +  +TG +L++DGG 
Sbjct: 239 SDYMTGQSLLIDGGM 253

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  186 bits (476), Expect = 4e-58
 Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 13/253 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA--CKLGEDVCYIHCDV 58
           L G+ A++TG  SGIG A A  +   GA V+     D + +        G     +  D+
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADL 88

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
              +   N+ +  +A   ++D++ NNAGI+ R  A   +        VL VN    ++ +
Sbjct: 89  ADLEGAANVAE-ELAATRRVDVLVNNAGIIARAPA--EEVSLGRWREVLTVNLDAAWVLS 145

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +     M+    G I+  AS  +   G    AY  SK+ ++ L + LA+E    G+ VN 
Sbjct: 146 RSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNA 205

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALYLATDEASDVT 235
           ++P  +V+  ++    +        +     R   G+    E +   A++LA+D AS V 
Sbjct: 206 LAPGYVVTANTAALRADDERAAEITA-----RIPAGRWATPEDMVGPAVFLASDAASYVH 260

Query: 236 GLNLVVDGGFSVA 248
           G  L VDGG+  +
Sbjct: 261 GQVLAVDGGWLAS 273

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  185 bits (473), Expect = 5e-58
 Identities = 57/253 (22%), Positives = 101/253 (39%), Gaps = 18/253 (7%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG--QALACKLGEDVCYIHCDVTS 60
           GKV ++TG + GIG +   +        V+  V  +    + L  K G+   Y+  D+T 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +  +  LV+ AV  +GK+D +  NAG++     +V +   +   ++  +N          
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVL-EPVQNVNEIDVNAWKKLYDINFFSIVSLVGI 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   +  +  G ++F +S    +      AY  SK  +      LA E R   ++   V+
Sbjct: 121 ALPELK-KTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEER--QVKAIAVA 177

Query: 181 PYGLV--------SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           P G+V              +S++   L+ F     N   Q+L++   A     LA     
Sbjct: 178 P-GIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN--NQLLDSSVPATVYAKLALHGIP 234

Query: 233 D-VTGLNLVVDGG 244
           D V G  L  +  
Sbjct: 235 DGVNGQYLSYNDP 247

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  186 bits (475), Expect = 6e-58
 Identities = 66/260 (25%), Positives = 111/260 (42%), Gaps = 28/260 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            EG  AI++GGA G+G A  +  H +G  VVIAD+    G+ALA +LG    ++  +VTS
Sbjct: 28  FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTS 87

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD---RVLAVNTTGGFLG 117
           ED +   ++ A         +  + G          D   +D+    + + +   G +  
Sbjct: 88  EDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNV 147

Query: 118 AKHAARVMIPQH------KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
           A+  A  +          +G ++ TAS       IG  AY  +K G+I L    A +L  
Sbjct: 148 ARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLSS 207

Query: 172 YGLRVNCVSPYG-----LVSGIS--SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
            G+RVN ++P G     ++  +   +       I   F   +G         +  A+AA 
Sbjct: 208 AGIRVNTIAP-GTMKTPIMESVGEEALAKFAANI--PFPKRLG-------TPDEFADAAA 257

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +L T+    + G  + +DG 
Sbjct: 258 FLLTN--GYINGEVMRLDGA 275

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  185 bits (472), Expect = 1e-57
 Identities = 62/253 (24%), Positives = 107/253 (42%), Gaps = 13/253 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ K  ++TGG  GIG A  + F   GA +      +        K    G  V    CD
Sbjct: 12  LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 71

Query: 58  VTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
            +   E   L+ T  + +G KLDI+ NN G +       LD    D    ++ N    + 
Sbjct: 72  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPT--LDYTAEDFSFHISTNLESAYH 129

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            ++ A  ++     G I+F +S    ++      Y+ +K  +  L + LA E    G+R 
Sbjct: 130 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 189

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDV 234
           N V+P  +++   +    +    +  +S   +G   G+    E +++   +L    AS +
Sbjct: 190 NAVAP-AVIATPLAEAVYDDEFKKVVISRKPLGRF-GE---PEEVSSLVAFLCMPAASYI 244

Query: 235 TGLNLVVDGGFSV 247
           TG  + VDGG +V
Sbjct: 245 TGQTICVDGGLTV 257

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  185 bits (471), Expect = 1e-57
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 14/251 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC-----KLGEDVCYIH 55
            + K A++TG + G+G AAA    ENG  +VI   + +   AL       KLG  V  + 
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYAR-SKKAALETAEEIEKLGVKVLVVK 60

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            +V    +I  +       +G+LD+  NNA         V++  ++  D  + +N     
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGV--LRPVMELEETHWDWTMNINAKALL 118

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
             A+ AA++M     G I+  +S  +           VSK  + AL + LA EL    + 
Sbjct: 119 FCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQII 178

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
           VN VS   + +           +LE        G +  +    + + +   +L + +A  
Sbjct: 179 VNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRM-VE---IKDMVDTVEFLVSSKADM 234

Query: 234 VTGLNLVVDGG 244
           + G  ++VDGG
Sbjct: 235 IRGQTIIVDGG 245

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  183 bits (467), Expect = 3e-57
 Identities = 39/247 (15%), Positives = 84/247 (34%), Gaps = 27/247 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              K  ++ GG+  +GA   K F       +  D ++N     +              + 
Sbjct: 20  HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS---------FTIKDSG 70

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E+EI ++++   +K  K+D     AG    G  +  D     +  ++ +N    F  A  
Sbjct: 71  EEEIKSVIEKINSKSIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHI 129

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL--RQYGLRVNC 178
            A+++     G  + T ++       G  AY  +K     ++K LA+E      G     
Sbjct: 130 GAKLL--NQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLG 187

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL-YLATDEASDVTGL 237
           + P   +   ++R  ++ A  + +                +A     +    ++    G 
Sbjct: 188 ILP-VTLDTPTNRKYMSDANFDDWTP-----------LSEVAEKLFEWSTNSDSRPTNGS 235

Query: 238 NLVVDGG 244
            +  +  
Sbjct: 236 LVKFETK 242

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  183 bits (468), Expect = 5e-57
 Identities = 78/258 (30%), Positives = 127/258 (49%), Gaps = 23/258 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQA---LACKLGEDVCYIHC 56
           L G+VA++TGG+ G+G   A+   E G  VV+A    +   +A   L  K G +     C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV++ +E+  L++    K+GKLD + N AGI  R  A   + P  +  +V+ VN  G + 
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPA--EEFPLDEFRQVIEVNLFGTYY 136

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLR 175
             + A  ++       I+   S   E   +    AY  SK G+ +L K LA E  +YG+R
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196

Query: 176 VNCVSP-YGLVSGISSRNSI----NPAILEAFLSE--MGNLRGQVLNAEGIANAALYLAT 228
           VN ++P +       ++ +     +P  L+  L    +G   G     E +   A++LA+
Sbjct: 197 VNVIAPGW-----YRTKMTEAVFSDPEKLDYMLKRIPLGRT-GVP---EDLKGVAVFLAS 247

Query: 229 DEASDVTGLNLVVDGGFS 246
           +EA  VTG  + VDGG++
Sbjct: 248 EEAKYVTGQIIFVDGGWT 265

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  183 bits (466), Expect = 6e-57
 Identities = 69/259 (26%), Positives = 109/259 (42%), Gaps = 24/259 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
           L+GK  +ITG + GIG A A+LF   GAKV +   +         A     G D  +   
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D+ + +    LVD  VAK+G +D++ NNAG +      + +   +  D V+  N     +
Sbjct: 65  DLATSEACQQLVDEFVAKFGGIDVLINNAGGLVG-RKPLPEIDDTFYDAVMDANIRSVVM 123

Query: 117 GAKHAARVMIPQHK-----GCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELR 170
             K A   +    K       ++ T S      G  G+  Y  +K  +  + K       
Sbjct: 124 TTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHT 183

Query: 171 QYGLRVNCVSPYGLVSGISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
           + G+R N VSP G    + +         + +   +   MG   G    AE +A A L+ 
Sbjct: 184 KDGVRFNIVSP-GT---VDTAFHADKTQDVRDRISNGIPMGRF-GT---AEEMAPAFLFF 235

Query: 227 ATDEASD-VTGLNLVVDGG 244
           A+  AS  +TG  L ++GG
Sbjct: 236 ASHLASGYITGQVLDINGG 254

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  183 bits (466), Expect = 8e-57
 Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 28/245 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L G+VA++TG + GIGAA A+     GA+VV+        +A+  ++   G +     CD
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++  D I       +A +G+ D++ NNAG+       +     ++ D ++AVN    +L 
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVG-WFGGPLHTMKPAEWDALIAVNLKAPYLL 145

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +  A  MI   +G I+  +S   +       AYT SK+G+  L+   A ELRQ+ +RV+
Sbjct: 146 LRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVS 205

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGN------LRGQVLNAEGIANAALYLATDEA 231
            V+P G V                  +E G            +  + IA+    LAT   
Sbjct: 206 LVAP-GSVR-----------------TEFGVGLSAKKSALGAIEPDDIADVVALLATQAD 247

Query: 232 SDVTG 236
                
Sbjct: 248 QSFIS 252

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  181 bits (463), Expect = 2e-56
 Identities = 50/252 (19%), Positives = 80/252 (31%), Gaps = 18/252 (7%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
             AI+T      G  +A    E G  V   D        L         Y      SE E
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE---AFAETYPQLKPMSEQE 58

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
              L++   + YG++D++ +N       F  +      D    +       F      A 
Sbjct: 59  PAELIEAVTSAYGQVDVLVSNDIFA-PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 117

Query: 124 VMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYG 183
            M  +  G I+F  SA           YT ++ G   L   L+ EL +Y + V  + P  
Sbjct: 118 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP-N 176

Query: 184 LVS-------GISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDV 234
            +          +     NP  +        +  L G     + +     +LA+     +
Sbjct: 177 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRL-GT---QKELGELVAFLASGSCDYL 232

Query: 235 TGLNLVVDGGFS 246
           TG    + GGF 
Sbjct: 233 TGQVFWLAGGFP 244

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  181 bits (461), Expect = 3e-56
 Identities = 50/244 (20%), Positives = 89/244 (36%), Gaps = 13/244 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
                  + G    IGA  AK F   G  V            L  ++   G  +     D
Sbjct: 5   PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
             +EDE+T  ++ A   +  L++   N G        +L+T      +V  +    GF+ 
Sbjct: 65  ARNEDEVTAFLN-AADAHAPLEVTIFNVGA--NVNFPILETTDRVFRKVWEMACWAGFVS 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV- 176
            + +AR+M+   +G I FT +  +   G G  A+  +K+G+ A+ + +A EL    + V 
Sbjct: 122 GRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVA 181

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS-DVT 235
           + +     V     R        +  L+    L    +    +A A   L     S    
Sbjct: 182 HLIID-SGVDTAWVRERREQMFGKDALANPDLL----MPPAAVAGAYWQLYQQPKSAWTF 236

Query: 236 GLNL 239
            + +
Sbjct: 237 EMEI 240

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  182 bits (465), Expect = 3e-56
 Identities = 62/234 (26%), Positives = 106/234 (45%), Gaps = 12/234 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
            +G+ A++TGGASGIG A A  F   GA++V++DV     +     L   G D   + CD
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V   DE+  L D A    G +D++++NAGIV      +      D   V+ ++  G    
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGIV--VAGPLAQMNHDDWRWVIDIDLWGSIHA 146

Query: 118 AKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            +     ++ Q   G I FTAS    +   G   Y V+KYG++ L + LA E++  G+ V
Sbjct: 147 VEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGV 206

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSE------MGNLRGQVLNAEGIANAAL 224
           + + P  + + + S +           +           + + ++A+ +A    
Sbjct: 207 SVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTA 260

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  181 bits (462), Expect = 6e-56
 Identities = 75/273 (27%), Positives = 112/273 (41%), Gaps = 28/273 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---------------ALAC 45
            EGK A+ITGGA G+G + A    E GA + I D  +N                  AL  
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVE 67

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
           K G        DV     + + V  A    G +DI   NAGI     A + +   +  D 
Sbjct: 68  KTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIS--TIALLPEVESAQWDE 125

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           V+  N TG F      A  MI ++ G I+  +S     A     +Y  SK+G+I L K  
Sbjct: 126 VIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCA 185

Query: 166 AAELRQYGLRVNCVSPYG----LVSGISSRNSINPAILEAFLSEMGN-------LRGQVL 214
           A +L  YG+ VN V+P      +        ++ P + +  L ++ +            L
Sbjct: 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL 245

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             E +  A L+L  + +S +TG  L +D G + 
Sbjct: 246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATA 278

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  178 bits (453), Expect = 3e-55
 Identities = 52/248 (20%), Positives = 89/248 (35%), Gaps = 17/248 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           +     I+TG  SG+G A      E G +V +   +    Q     LG  V  I  D+  
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAH 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +++      AV   G  +++ + AG  +  F  V       + RV+  N     L A+ 
Sbjct: 61  HEDVDVAFAAAVEWGGLPELVLHCAGTGE--FGPVGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R++  +  G +    S+  ++       Y  SK+G+   ++ L AEL+   LR+  + 
Sbjct: 119 TVRLIG-ERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLY 177

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY-LATDEASDVTGLNL 239
           P G+ S                           +  E  A   L  L    +  VT L +
Sbjct: 178 PSGIRSEFWDNTDHVD-------------PSGFMTPEDAAAYMLDALEARSSCHVTDLFI 224

Query: 240 VVDGGFSV 247
             + G   
Sbjct: 225 GRNEGHHH 232

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  176 bits (450), Expect = 2e-54
 Identities = 69/255 (27%), Positives = 106/255 (41%), Gaps = 23/255 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
           L+G+  ++TGG  GIG   A +F   GA V +A        A    L       V  +  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DV+   +   L   AV ++G +D++  NAG+  D   A +       L+ + AVN  G F
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD---APLATMTPEQLNGIFAVNVNGTF 124

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGL 174
              +     +I    G ++ T+S    I G  G   Y  +K   +  ++  A EL  + +
Sbjct: 125 YAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184

Query: 175 RVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATD 229
            VN + P     G I +          + +       G L G     E I + A +LAT 
Sbjct: 185 TVNAIMP-----GNIMTEGLLENGEEYIASMARSIPAGAL-GT---PEDIGHLAAFLATK 235

Query: 230 EASDVTGLNLVVDGG 244
           EA  +TG  + VDGG
Sbjct: 236 EAGYITGQAIAVDGG 250

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  174 bits (445), Expect = 6e-54
 Identities = 78/251 (31%), Positives = 114/251 (45%), Gaps = 26/251 (10%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           + A++TGG+ GIG A A+     G +V IA       +  A  LG     +  D+  +D 
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLGAVP--LPTDLEKDD- 56

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
              LV  A+   G L ++ + A +  R  A  L+    +  RVL ++    FL A+ AA 
Sbjct: 57  PKGLVKRALEALGGLHVLVHAAAVNVRKPA--LELSYEEWRRVLYLHLDVAFLLAQAAAP 114

Query: 124 VMIPQHKGCILFTASACTEIAG--IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            M     G +LF  S  T  AG  +  PAYT +K  ++ L + LA E  + G+RVN + P
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174

Query: 182 -YGLVSGISSRN----SINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDV 234
            Y     + +        NP + E   +   MG    +    E IA  A  L  DEA  +
Sbjct: 175 GY-----VETEFTLPLRQNPELYEPITARIPMGRW-AR---PEEIARVAAVLCGDEAEYL 225

Query: 235 TGLNLVVDGGF 245
           TG  + VDGGF
Sbjct: 226 TGQAVAVDGGF 236

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  175 bits (446), Expect = 1e-53
 Identities = 61/273 (22%), Positives = 104/273 (38%), Gaps = 32/273 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
            E   A+ITGGA  IG + A   H+ G +VV+           L   L            
Sbjct: 9   SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCK 68

Query: 56  CDVTSEDEITN----LVDTAVAKYGKLDIMYNNAGI---------VDRGFASVLDTPKSD 102
            D++    + +    ++D +   +G+ D++ NNA            D   A+      + 
Sbjct: 69  GDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128

Query: 103 LDRVLAVNTTGGFLGAKHAARVMIP-----QHKGCILFTASACTEIAGIGSPAYTVSKYG 157
           +  +   N        +  AR              ++    A T++   G   YT++K+ 
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHA 188

Query: 158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLN 215
           +  L +  A EL    +RVN V+P GL        ++     E +  +  +G        
Sbjct: 189 LGGLTRAAALELAPRHIRVNAVAP-GL---SLLPPAMPQETQEEYRRKVPLGQSEAS--- 241

Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
           A  IA+A  +L + +A  +TG  L VDGG  +A
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLILA 274

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  174 bits (444), Expect = 1e-53
 Identities = 52/251 (20%), Positives = 81/251 (32%), Gaps = 13/251 (5%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
            V  ITG ASGIGAA  +L    G  V+  D      +A     G     +   +     
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 64  -----ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
                +        A    L +  N  G+            +      + V +       
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
                ++     G          E  G    AY  SKY +  L +    +    G+R+N 
Sbjct: 122 AAELPMVEAMLAGDEARAIELA-EQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 179 VSPYGLVS-GISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVT 235
           V+P G V   +   +  +P   E+    +  L    +      +A A  +L   +AS + 
Sbjct: 181 VAP-GAVETPLLQASKADPRYGESTRRFVAPLGRGSE---PREVAEAIAFLLGPQASFIH 236

Query: 236 GLNLVVDGGFS 246
           G  L VDGG  
Sbjct: 237 GSVLFVDGGMD 247

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  174 bits (443), Expect = 1e-53
 Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 14/249 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK A++TG A GIG A A     +GA V+++D+     +A A  +G+    I  D++ 
Sbjct: 4   LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +  L     A  G +DI+ NNA IV        D       +++ VN TG F+  + 
Sbjct: 64  PGSVKALFAEIQALTGGIDILVNNASIVPFVA--WDDVDLDHWRKIIDVNLTGTFIVTRA 121

Query: 121 AARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
               M    K G ++  AS           AY  +K G+I   + LA EL +Y +  N V
Sbjct: 122 GTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAV 181

Query: 180 SPYGLVSGISSR--NSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVT 235
           +P GL   I S    +        F+  +  ++  GQ    E IA+   +LA+D+A  +T
Sbjct: 182 TP-GL---IESDGVKASPHNEAFGFVEMLQAMKGKGQ---PEHIADVVSFLASDDARWIT 234

Query: 236 GLNLVVDGG 244
           G  L VD G
Sbjct: 235 GQTLNVDAG 243

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  174 bits (444), Expect = 2e-53
 Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 16/258 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHC 56
               VAI+TGG  GIG   A+    +G  + I  + D  G A        LG  V ++  
Sbjct: 27  KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRA 86

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D+         VD  VA++G++D + NNAGI        LD    + D ++ VN  G   
Sbjct: 87  DLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVF 146

Query: 117 GAKHAARVMI---PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
             +   + M+    +    I+   S    +       Y +SK G+ A  + LA  L + G
Sbjct: 147 FTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETG 206

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALYLATDE 230
           + V  V P G++     R+ +  A+   +   + +      +    E I N    LA  +
Sbjct: 207 IAVFEVRP-GII-----RSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQ 260

Query: 231 ASDVTGLNLVVDGGFSVA 248
               TG  +  DGG S+ 
Sbjct: 261 FGFATGSVIQADGGLSIG 278

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  174 bits (444), Expect = 4e-53
 Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 23/255 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE----DVCYIHC 56
           L  +  ++TGG  GIG   A +F   GA V +A        ++  +LGE    +V  +  
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DV+      +   T V  +G LD++  NAGI  +   A +       L  VL VN  G  
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGIFPE---ARLDTMTPEQLSEVLDVNVKGTV 155

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGL 174
              +     +    +G ++ T+S    + G  G   Y  SK   +  ++  A EL   G+
Sbjct: 156 YTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215

Query: 175 RVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATD 229
            VN + P     G I +     +    +        MG L G       I + A +LATD
Sbjct: 216 TVNAILP-----GNILTEGLVDMGEEYISGMARSIPMGML-GS---PVDIGHLAAFLATD 266

Query: 230 EASDVTGLNLVVDGG 244
           EA  +TG  +VVDGG
Sbjct: 267 EAGYITGQAIVVDGG 281

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  173 bits (442), Expect = 5e-53
 Identities = 78/266 (29%), Positives = 113/266 (42%), Gaps = 40/266 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
            +  V ++TGG+ GIGAA  +L    G +V +             A + ++ G+A+A   
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIP- 82

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                    DV +  +I  +      ++G+LD + NNAGIV      V +     ++R+L
Sbjct: 83  --------GDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIV-DYPQRVDEMSVERIERML 133

Query: 108 AVNTTGGFLGAKHAARVMIPQHK---GCILFTASACTEIAGIGSP----AYTVSKYGIIA 160
            VN TG  L A  A R M   +    G I+  +S     A +GS      Y  SK  I  
Sbjct: 134 RVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSM---AAILGSATQYVDYAASKAAIDT 190

Query: 161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEG 218
               LA E+   G+RVN V P G++      +   P           M    G     E 
Sbjct: 191 FTIGLAREVAAEGIRVNAVRP-GIIETDLHASGGLPDRAREMAPSVPMQRA-GM---PEE 245

Query: 219 IANAALYLATDEASDVTGLNLVVDGG 244
           +A+A LYL +  AS VTG  L V GG
Sbjct: 246 VADAILYLLSPSASYVTGSILNVSGG 271

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  172 bits (438), Expect = 1e-52
 Identities = 67/260 (25%), Positives = 109/260 (41%), Gaps = 18/260 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC-----KLGEDVCYIH 55
              +  ++ G    IG A A  F + GA VV+         A        KLG     I 
Sbjct: 6   FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYN-GAAEGAATAVAEIEKLGRSALAIK 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D+T+  E+   +  A  K+G++  + + AG +     ++ +  ++   +VL VN T  F
Sbjct: 65  ADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGL 174
           L AK A   M     G I+  +S      G  G+ AY  SK  ++   + LA E+    +
Sbjct: 124 LTAKTALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KI 180

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
           RVN V P G++S         P + E       +    G    +E +A    +LA+D+A+
Sbjct: 181 RVNAVCP-GMISTTFHDTFTKPEVRERVAGATSLKRE-GS---SEDVAGLVAFLASDDAA 235

Query: 233 DVTGLNLVVDGGFSVANPSL 252
            VTG    ++GG   +    
Sbjct: 236 YVTGACYDINGGVLFSEGHH 255

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  171 bits (435), Expect = 2e-52
 Identities = 45/253 (17%), Positives = 78/253 (30%), Gaps = 25/253 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVV-IADVQDNLGQALACKL---GEDVCYIHC 56
           L  K  I      GIG   ++   +   K   I D  +N       K      ++ +   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 57  DVT-SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DVT    E   L+     +   +DI+ N AGI               ++R +A+N TG  
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGI----------LDDHQIERTIAINFTGLV 112

Query: 116 LGAKHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
                       +     G I    S     A    P Y+ SK  +++    LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 173 GLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           G+    ++P G+  + +    +    +       + +   Q   +E      +       
Sbjct: 173 GVTAYSINP-GITRTPLVHTFNSWLDVEPRVAELLLSHPTQ--TSEQCGQNFVKAIEANK 229

Query: 232 SDVTGLNLVVDGG 244
               G    +D G
Sbjct: 230 ---NGAIWKLDLG 239

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  171 bits (436), Expect = 4e-52
 Identities = 71/259 (27%), Positives = 114/259 (44%), Gaps = 21/259 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDV 58
           L G++A++TGG+ GIG   A+   E GA+V I           A +L    D   I  D+
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADL 86

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           +SE     L         +LDI+ NNAG      A++   P S  ++V+ +N T  F   
Sbjct: 87  SSEAGARRLAQALGELSARLDILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCI 144

Query: 119 KHAARVM----IPQHKGCILFTAS-ACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
           +    ++      ++   ++   S A     G  + AY  SK  +  L ++LA EL    
Sbjct: 145 QQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEH 204

Query: 174 LRVNCVSPYGLVSG-ISSRNSI----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           + VN ++P     G   SR +     +P  LEA  +      G+    E +A  A+ LA 
Sbjct: 205 INVNVIAP-----GRFPSRMTRHIANDPQALEADSA--SIPMGRWGRPEEMAALAISLAG 257

Query: 229 DEASDVTGLNLVVDGGFSV 247
              + +TG  + +DGGF +
Sbjct: 258 TAGAYMTGNVIPIDGGFHL 276

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  170 bits (434), Expect = 4e-52
 Identities = 53/253 (20%), Positives = 97/253 (38%), Gaps = 24/253 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED-VCYIHCDVT 59
           L     +ITG +  +G   A    E+G +V+I+   +    A   +L +     ++ D +
Sbjct: 25  LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALYGDFS 81

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E  I   +D    +   L  + +NA       A        +  R+ +V+    +L   
Sbjct: 82  CETGIMAFIDLLKTQTSSLRAVVHNASEW---LAETPGEEADNFTRMFSVHMLAPYLINL 138

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL--RQYGLRVN 177
           H   ++       I+  +   T        AY  +K G+ +L    AA        ++VN
Sbjct: 139 HCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPL---VKVN 195

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
            ++P  L   +  +   + A     L++  +G        AE I  +  YL   +++ VT
Sbjct: 196 GIAP-AL---LMFQPKDDAAYRANALAKSALGIE-PG---AEVIYQSLRYLL--DSTYVT 245

Query: 236 GLNLVVDGGFSVA 248
           G  L V+GG  V 
Sbjct: 246 GTTLTVNGGRHVK 258

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  170 bits (434), Expect = 5e-52
 Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 43/272 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           L+GKVA++TG   GIGAA A      GAKVV+             ++++     A+A   
Sbjct: 16  LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA--- 72

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                 I  D+    EI  L D AVA +G LDI  +N+G+V   F  + D  + + DRV 
Sbjct: 73  ------IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRVF 124

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILA 166
           ++NT G F  A+ A R +     G I+ T+S  ++   +     Y+ SK  + + V+I +
Sbjct: 125 SLNTRGQFFVAREAYRHL--TEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFS 182

Query: 167 AELRQYGLRVNCVSP----------YGLVSGISSRNSINPAILEAFLSE--MGNLRGQVL 214
            +     + VN V+P                 +  +       +       +    G   
Sbjct: 183 KDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRN-GW-- 239

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
             + +AN   +L + E   V G  L +DGG +
Sbjct: 240 -PQDVANVVGFLVSKEGEWVNGKVLTLDGGAA 270

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  170 bits (433), Expect = 6e-52
 Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 35/263 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+ +V I+TG +SG+GAA  ++  + GA V+  D++   G+  A +LG  V + + DVT+
Sbjct: 5   LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTN 64

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS--DLDRVLAVNTTGGFLGA 118
           E + T  +  A  ++G +  + N AG            P +     R +AVN  G F   
Sbjct: 65  EADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMI 124

Query: 119 KHAARVMIPQ------HKGCILFTASACTEIAG----IGSPAYTVSKYGIIALVKILAAE 168
           + AA VM          +G I+ TAS    IA     IG  AY  SK G+ AL    A E
Sbjct: 125 RLAAEVMSQGEPDADGERGVIVNTAS----IAAFDGQIGQAAYAASKGGVAALTLPAARE 180

Query: 169 LRQYGLRVNCVSPYG-----LVSGIS--SRNSINPAILEAFLSEMGNLRGQVLNAEGIAN 221
           L ++G+RV  ++P G     +++G+    ++++  ++   F   +G        AE  A 
Sbjct: 181 LARFGIRVVTIAP-GIFDTPMMAGMPQDVQDALAASVP--FPPRLG-------RAEEYAA 230

Query: 222 AALYLATDEASDVTGLNLVVDGG 244
              ++   E + + G  + +DG 
Sbjct: 231 LVKHIC--ENTMLNGEVIRLDGA 251

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  171 bits (435), Expect = 7e-52
 Identities = 62/271 (22%), Positives = 110/271 (40%), Gaps = 32/271 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           +E   A++TG A  IG A A   H+ G +VVI     A+   +L   L  +         
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80

Query: 56  CDVTSED----EITNLVDTAVAKYGKLDIMYNNAGI--------VDRGFASVLDTPKSDL 103
            D+T+ +        ++++    +G+ D++ NNA           D    S   T ++ +
Sbjct: 81  ADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQV 140

Query: 104 DRVLAVNTTGGFLGAKHAARVM------IPQHKGCILFTASACTEIAGIGSPAYTVSKYG 157
             ++  N    FL     A+               I+    A  +   +    Y + K+ 
Sbjct: 141 AELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA 200

Query: 158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLN 215
           ++ L +  A EL  YG+RVN V+P G+        ++     + +  +  +G        
Sbjct: 201 LVGLTQSAALELAPYGIRVNGVAP-GV---SLLPVAMGEEEKDKWRRKVPLGRREAS--- 253

Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGGFS 246
           AE IA+A ++L +  A  +TG  + VDGG S
Sbjct: 254 AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  170 bits (432), Expect = 9e-52
 Identities = 70/260 (26%), Positives = 114/260 (43%), Gaps = 33/260 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
              KVAI+TG + GIGAA A     +G  VVI               ++   G+AL    
Sbjct: 25  ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALT--- 81

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                    DV+    +  L  TA   +G +D++ NNAGI+     ++ +T  +  DRV+
Sbjct: 82  ------AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP--LTTIAETGDAVFDRVI 133

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
           AVN  G F   + AA+ +  +  G I+  +++   +       Y  +K G+ A+  +L+ 
Sbjct: 134 AVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSK 191

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALY 225
           ELR   + VN V+P G  +        +  + + F     +  L G     + IA A  +
Sbjct: 192 ELRGRDITVNAVAP-GPTATDLFLEGKSDEVRDRFAKLAPLERL-GT---PQDIAGAVAF 246

Query: 226 LATDEASDVTGLNLVVDGGF 245
           LA  + + V G  L  +GG 
Sbjct: 247 LAGPDGAWVNGQVLRANGGI 266

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  170 bits (432), Expect = 9e-52
 Identities = 55/272 (20%), Positives = 102/272 (37%), Gaps = 37/272 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI---------------ADVQDNLGQALAC 45
           L+ KV +I GG   +GA  AK F      +V+                +++D   +    
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVAL- 67

Query: 46  KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
                      D+++E+E+  L D A  ++GK+DI  N  G V      +++T +++ D 
Sbjct: 68  --------YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL--KKPIVETSEAEFDA 117

Query: 106 VLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           +  +N    +   K AA+ M     G I+  A++           Y  +K  +    +  
Sbjct: 118 MDTINNKVAYFFIKQAAKHM--NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAA 175

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAA 223
           + EL +  + VN ++P G +                  S+     L  ++   E IA   
Sbjct: 176 SKELMKQQISVNAIAP-GPMDTSFFYGQETKESTAFHKSQAMGNQL-TKI---EDIAPII 230

Query: 224 LYLATDEASDVTGLNLVVDGGFSVANPSLMKF 255
            +L TD    + G  +  +GG+          
Sbjct: 231 KFLTTD-GWWINGQTIFANGGY-TTREGHHHH 260

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  172 bits (438), Expect = 1e-51
 Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 27/255 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA----------CKLGED 50
           L G    ITG + GIG A A    ++GA +VIA         L             +G  
Sbjct: 43  LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGK 102

Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN 110
                 DV  E +I+  V+ A+ K+G +DI+ NNA  +     + LDTP   LD ++ VN
Sbjct: 103 ALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS--LTNTLDTPTKRLDLMMNVN 160

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI--GSPAYTVSKYGIIALVKILAAE 168
           T G +L +K     +       IL  +              AYT++KYG+   V  +A E
Sbjct: 161 TRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEE 220

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
            +   + VN + P         + +I+ A ++        +  Q    + IA+AA  +  
Sbjct: 221 FK-GEIAVNALWP---------KTAIHTAAMDMLGGPG--IESQCRKVDIIADAAYSIFQ 268

Query: 229 DEASDVTGLNLVVDG 243
                 TG  ++ + 
Sbjct: 269 K-PKSFTGNFVIDEN 282

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  169 bits (430), Expect = 1e-51
 Identities = 83/251 (33%), Positives = 127/251 (50%), Gaps = 23/251 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+ K  +ITG A GIG A  +LF + GA++V  D+++   +  A  +G     +  DV  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHP--VVMDVAD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +      A+A  G+LD + + AGI    F      P  D + VL VN TG FL AK 
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTGSFLVAKA 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPA---YTVSKYGIIALVKILAAELRQYGLRVN 177
           A+  M  ++ G I+ TAS       +G+     Y  S  G++ L + LA EL ++G+RVN
Sbjct: 119 ASEAMREKNPGSIVLTAS----RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVN 174

Query: 178 CVSPYGLVSGISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASD 233
            ++P G    I +R    +   + E  ++   +G   G+      +A AAL+L +DE+S 
Sbjct: 175 TLAP-GF---IETRMTAKVPEKVREKAIAATPLGRA-GK---PLEVAYAALFLLSDESSF 226

Query: 234 VTGLNLVVDGG 244
           +TG  L VDGG
Sbjct: 227 ITGQVLFVDGG 237

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  169 bits (431), Expect = 2e-51
 Identities = 76/261 (29%), Positives = 119/261 (45%), Gaps = 29/261 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           ++G VA+ITGGASG+G A A+     GA  V+ D+ ++ G+A A KLG +  +   DVTS
Sbjct: 10  VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 69

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDT----PKSDLDRVLAVNTTGGFL 116
           E ++   +  A  K+G++D+  N AGI        L         D  RVL VN  G F 
Sbjct: 70  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 129

Query: 117 GAKHAARVMIPQ------HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
             +  A  M          +G I+ TAS       +G  AY+ SK GI+ +   +A +L 
Sbjct: 130 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 189

Query: 171 QYGLRVNCVSPYG-----LVSGIS--SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
             G+RV  ++P G     L++ +     N +   +   F S +G       +    A+  
Sbjct: 190 PIGIRVMTIAP-GLFGTPLLTSLPEKVCNFLASQVP--FPSRLG-------DPAEYAHLV 239

Query: 224 LYLATDEASDVTGLNLVVDGG 244
             +   E   + G  + +DG 
Sbjct: 240 QAII--ENPFLNGEVIRLDGA 258

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  169 bits (430), Expect = 3e-51
 Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 42/271 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           LEGKVA++TG   GIG   A      G KV++             A ++ N   A     
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAAC--- 83

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                 +  +V   ++I  + + AV  +GKLDI+ +N+G+V   F  V D    + DRV 
Sbjct: 84  ------VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVV--SFGHVKDVTPEEFDRVF 135

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILA 166
            +NT G F  A+ A + +  +  G ++   S   +   +     Y+ SK  I    + +A
Sbjct: 136 TINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMA 193

Query: 167 AELRQYGLRVNCVSP----------YGLVSGISSRNSINPAILEAFLSEMGNLR--GQVL 214
            ++    + VN V+P                 +  N  N  + E    +   LR  G   
Sbjct: 194 IDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGL-- 251

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGGF 245
               IA    +LA+++   VTG  + +DGG 
Sbjct: 252 -PIDIARVVCFLASNDGGWVTGKVIGIDGGA 281

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  167 bits (426), Expect = 8e-51
 Identities = 78/262 (29%), Positives = 115/262 (43%), Gaps = 36/262 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           L GK A +TGG+ GIGAA AK     GA V +             ++++   G+A+A   
Sbjct: 29  LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVA--- 85

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                 I  D    + I   +   V   G LDI+ N+AGI     A + +T  +D D V+
Sbjct: 86  ------IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH--SAPLEETTVADFDEVM 137

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILA 166
           AVN    F+  + A+R +     G I+   S   E+    G   Y+ SK  +  L K LA
Sbjct: 138 AVNFRAPFVAIRSASRHL--GDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLA 195

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAAL 224
            +L   G+ VN V P G     +  N  +    EA       G+  G+    + IA    
Sbjct: 196 RDLGPRGITVNIVHP-GSTD--TDMNPADGDHAEAQRERIATGSY-GE---PQDIAGLVA 248

Query: 225 YLATDEASDVTGLNLVVDGGFS 246
           +LA  +   VTG +L +DGG +
Sbjct: 249 WLAGPQGKFVTGASLTIDGGAN 270

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  166 bits (422), Expect = 2e-50
 Identities = 49/261 (18%), Positives = 93/261 (35%), Gaps = 42/261 (16%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
            +  +AIITG + GIGA  A     +G +VV+        + +  ++       ++   +
Sbjct: 5   KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVL 64

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             D+T   +    +     KYG +DI+ N A +        L  P  +  +++ +N    
Sbjct: 65  PLDITDCTKADTEIKDIHQKYGAVDILVNAAAM---FMDGSLSEPVDNFRKIMEINVIAQ 121

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELR 170
           +   K    +M  Q  G I   AS     A          Y  +K+ ++ L + L  EL 
Sbjct: 122 YGILKTVTEIMKVQKNGYIFNVAS----RAAKYGFADGGIYGSTKFALLGLAESLYRELA 177

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN------LRGQVLNAEGIANAAL 224
             G+RV  + P G V+                 ++M           +++  + + N   
Sbjct: 178 PLGIRVTTLCP-GWVN-----------------TDMAKKAGTPFKDEEMIQPDDLLNTIR 219

Query: 225 YLATD-EASDVTGLNLVVDGG 244
            L    E   +  +   +   
Sbjct: 220 CLLNLSENVCIKDIVFEMKKS 240

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  167 bits (426), Expect = 2e-50
 Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 21/244 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
             G+ A +TGGA+G+G    +     G KV IAD++ +        L     G +V  + 
Sbjct: 6   FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQ 65

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV S +      D   A++G + I+ NNAG+    F  + ++   D D +L VN  G  
Sbjct: 66  LDVASREGFKMAADEVEARFGPVSILCNNAGVN--LFQPIEESSYDDWDWLLGVNLHGVV 123

Query: 116 LGAKHAARVMI------PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
            G       M+       Q  G ++ TAS    +A      Y  +K+ +  L + L   L
Sbjct: 124 NGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSL 183

Query: 170 RQYGLRVNCVSPYGLVSGISSRNSINPAIL--------EAFLSEMGNLRGQVLNAEGIAN 221
            +Y + V+ + P  + S I + + I P  L        +  +  +  +    +  + I  
Sbjct: 184 LKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGA 243

Query: 222 AALY 225
             + 
Sbjct: 244 RVIE 247

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  166 bits (422), Expect = 3e-50
 Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 12/252 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           + G+V ++TG + GIG   A    + GA V I     +  + +A     LG     + CD
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD 62

Query: 58  VTSEDEITNLVDTAVA-KYGKLDIMYNNAGIVDRGFAS-----VLDTPKSDLDRVLAVNT 111
            + E E+ +L +     + G+LD++ NNA    +   +       +TP S  D +  V  
Sbjct: 63  SSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGL 122

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
            G +  + + AR+M+P  +G I+  +S    +  + +  Y V K     L    A ELR+
Sbjct: 123 RGHYFCSVYGARLMVPAGQGLIVVISSP-GSLQYMFNVPYGVGKAACDKLAADCAHELRR 181

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAIL-EAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
           +G+    + P  + + +   +     +L +  L +  +        E      + LATD 
Sbjct: 182 HGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDP 241

Query: 231 ASD-VTGLNLVV 241
               ++G  L  
Sbjct: 242 NILSLSGKVLPS 253

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  166 bits (423), Expect = 3e-50
 Identities = 64/270 (23%), Positives = 106/270 (39%), Gaps = 42/270 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           L GKVA+ TG   GIG   A      GA VV+             A+++    Q +A   
Sbjct: 19  LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVA--- 75

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVL 107
                 I  D++   E+  L D AV+ +G LD + +N+G+    +   L+  +   D+V 
Sbjct: 76  ------IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV--WCDELEVTQELFDKVF 127

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILA 166
            +NT G F  A+   +    +  G I+ T+S    + GI     Y  SK  +    +  A
Sbjct: 128 NLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFA 185

Query: 167 AELRQYGLRVNCVSP----------YGLVSGISSRNSINPAILEAFLSEMGNLR--GQVL 214
            +    G+ VNC++P                      +    ++  L+ M  L+  G   
Sbjct: 186 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGY-- 243

Query: 215 NAEGIANAALYLATDEASDVTGLNLVVDGG 244
               I  A   L  +E+  + G  + + GG
Sbjct: 244 -PADIGRAVSALCQEESEWINGQVIKLTGG 272

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  165 bits (420), Expect = 3e-50
 Identities = 34/257 (13%), Positives = 75/257 (29%), Gaps = 24/257 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            E +  ++ GG   +G+   + F      V   DV +N   + +  +           T 
Sbjct: 5   GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD-----SFTE 59

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           + +        +    K+D +   AG    G  +   +   + D +   +     + +  
Sbjct: 60  QADQVTAEVGKLLGDQKVDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHL 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ--YGLRVNC 178
           A + +  +  G +    +        G   Y ++K  +  L + LA +      G     
Sbjct: 119 ATKHL--KEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 176

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG-- 236
           V P   +        +N   +                 E +        T      +G  
Sbjct: 177 VLP-VTL-----DTPMNRKSMPE------ADFSSWTPLEFLVETFHDWITGNKRPNSGSL 224

Query: 237 LNLVVDGGFSVANPSLM 253
           + +V   G +   P+  
Sbjct: 225 IQVVTTDGKTELTPAYF 241

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  165 bits (419), Expect = 7e-50
 Identities = 52/275 (18%), Positives = 97/275 (35%), Gaps = 59/275 (21%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
            + +I+G A+GIGAA  K+    G ++V  D++D            +V     D+++ + 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD-----------AEV---IADLSTAEG 47

Query: 64  ITNLVDTAVAK-YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
               +   +AK    +D +   AG+               L  V++VN  G         
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGL---------GPQTKVLGNVVSVNYFGATELMDAFL 98

Query: 123 RVMIPQHKGCILFTAS----------------------------ACTEIAGIGSPAYTVS 154
             +   H+   +  +S                                    G+ AY  S
Sbjct: 99  PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158

Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVS-GISSRNSINPAILEAFLSEMGNLR--G 211
           K  +   V+  AA   + G+R+N ++P G     +      +P   E+    +  +    
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAP-GATETPLLQAGLQDPRYGESIAKFVPPMGRRA 217

Query: 212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS 246
           +      +A+   +L +  AS V G  +V+DGG  
Sbjct: 218 E---PSEMASVIAFLMSPAASYVHGAQIVIDGGID 249

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  164 bits (417), Expect = 8e-50
 Identities = 55/252 (21%), Positives = 93/252 (36%), Gaps = 43/252 (17%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAK-------VVIADVQDNLGQALACKL---GEDVCY 53
            + +ITG   GIG A A  F             +V++       + ++ +    G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           I  D++   ++  L    V +YG +D + NNAG+    F ++ D  + D D  +  N  G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR--FGALSDLTEEDFDYTMNTNLKG 120

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAEL 169
            F   +    +M  QH G I F  S    +A       S  Y +SK+G   LV+ +    
Sbjct: 121 TFFLTQALFALMERQHSGHIFFITS----VAATKAFRHSSIYCMSKFGQRGLVETMRLYA 176

Query: 170 RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAAL 224
           R+  +R+  V P G V                  + M       ++  ++  E IA   +
Sbjct: 177 RKCNVRITDVQP-GAVY-----------------TPMWGKVDDEMQALMMMPEDIAAPVV 218

Query: 225 YLATDEASDVTG 236
                 +  V  
Sbjct: 219 QAYLQPSRTVVE 230

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  165 bits (419), Expect = 2e-49
 Identities = 74/262 (28%), Positives = 109/262 (41%), Gaps = 28/262 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-----LACKLGEDVCYIH 55
           L+ + A++TGG SGIG AAA  +   GA V I  +      A     L  + G     + 
Sbjct: 47  LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLP 106

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++ E    +LV  A    G LDI+   AG        + D       +  AVN    F
Sbjct: 107 GDLSDESFARSLVHKAREALGGLDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFALF 165

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQY 172
              + A  ++       I+ T+S     A   SP    Y  +K  I+   + LA ++ + 
Sbjct: 166 WITQEAIPLL--PKGASIITTSSI---QAYQPSPHLLDYAATKAAILNYSRGLAKQVAEK 220

Query: 173 GLRVNCVSPYGLVS---GISSRNSINPAILEAFLSE--MGNLR-GQVLNAEGIANAALYL 226
           G+RVN V+P G +     IS         +  F  +  M   R GQ   AE +A   +YL
Sbjct: 221 GIRVNIVAP-GPIWTALQISG--GQTQDKIPQFGQQTPMK--RAGQP--AE-LAPVYVYL 272

Query: 227 ATDEASDVTGLNLVVDGGFSVA 248
           A+ E+S VT     V GG  + 
Sbjct: 273 ASQESSYVTAEVHGVCGGEHLG 294

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  164 bits (417), Expect = 3e-49
 Identities = 74/260 (28%), Positives = 106/260 (40%), Gaps = 22/260 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
              + A +TG +SGIG A A+     G  V           A    L   G DV    CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VTS DE+   V  AV ++G + I+ N+AG    G     D   +    VL  N TG F  
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRN--GGGETADLDDALWADVLDTNLTGVFRV 139

Query: 118 AKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            +   R   M     G I+  AS   +   + +  YT SK+G++   K +  EL + G+ 
Sbjct: 140 TREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGIT 199

Query: 176 VNCVSP--------YGLVSGISSRNSINP-AILEAFLSE--MGNLRGQVLNAEGIANAAL 224
           VN V P          +  G +    +    + E F ++  +G         E +A    
Sbjct: 200 VNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRY-ST---PEEVAGLVG 255

Query: 225 YLATDEASDVTGLNLVVDGG 244
           YL TD A+ +T   L V GG
Sbjct: 256 YLVTDAAASITAQALNVCGG 275

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  162 bits (413), Expect = 1e-48
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 22/260 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
            + +VA++TG  SGIG   A+   + G +V +    +   +    +L   G +     CD
Sbjct: 20  QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCD 79

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V S  EI  LV   V +YG +D++ NNAG    G  +  +        V+  N TG F  
Sbjct: 80  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP--GGGATAELADELWLDVVETNLTGVFRV 137

Query: 118 AKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            K   +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G+ 
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197

Query: 176 VNCVSP--------YGLVSGISSRNSINP-AILEAFLSE--MGNLRGQVLNAEGIANAAL 224
           VN V P          +    S    ++     +   +   +G    Q      +A    
Sbjct: 198 VNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRY-VQ---PSEVAEMVA 253

Query: 225 YLATDEASDVTGLNLVVDGG 244
           YL    A+ VT   L V GG
Sbjct: 254 YLIGPGAAAVTAQALNVCGG 273

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  161 bits (411), Expect = 1e-48
 Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 22/260 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
           L+GK A++TG  +GIG A A      GA V+I   ++        ++        +  + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D+ +E          + KY K+DI+ NN GI         D P  D  ++  VN   G 
Sbjct: 68  ADLGTEQG----CQDVIEKYPKVDILINNLGIF--EPVEYFDIPDEDWFKLFEVNIMSGV 121

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              +   + MI + +G ++F AS    +       Y+ +K   ++L + LA       + 
Sbjct: 122 RLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVT 181

Query: 176 VNCVSP--------YGLVSGISSRNSINP-AILEAFLSEM--GNLRGQVLNAEGIANAAL 224
           VN + P          +++ +     +      + F+ E    ++  +++  E IA+   
Sbjct: 182 VNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT 241

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +L++  +S + G  L +DGG
Sbjct: 242 FLSSPLSSAINGSALRIDGG 261

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  159 bits (406), Expect = 5e-48
 Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 16/249 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           LEGKVA++TG + GIG A A+L  E GAKV+     ++  QA++  LG++   +  +VT+
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTN 66

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            + I  ++     ++G +DI+ NNAGI        +   + +   ++  N T  F  +K 
Sbjct: 67  PESIEAVLKAITDEFGGVDILVNNAGITRDNLL--MRMKEEEWSDIMETNLTSIFRLSKA 124

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ + +G I+   S    +   G   Y  +K G+I   K +A E+   G+ VN V+
Sbjct: 125 VLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVA 184

Query: 181 PYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
           P     G I +    ++N     A L++   G L G       IA+A  +LA+ EA+ +T
Sbjct: 185 P-----GFIETDMTKALNDEQRTATLAQVPAGRL-GD---PREIASAVAFLASPEAAYIT 235

Query: 236 GLNLVVDGG 244
           G  L V+GG
Sbjct: 236 GETLHVNGG 244

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  159 bits (405), Expect = 1e-47
 Identities = 79/249 (31%), Positives = 120/249 (48%), Gaps = 16/249 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+ A++TG   GIG A A+ FH  GA V +   +++  + +A  LG+DV     +++ 
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSD 84

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              I  L + A  +   +DI+ NNAGI   G    +     D D VLAVN T      + 
Sbjct: 85  RKSIKQLAEVAEREMEGIDILVNNAGITRDGLF--VRMQDQDWDDVLAVNLTAASTLTRE 142

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
               M+ +  G I+   S    +   G   Y  +K G+I   K LA E+    + VNC++
Sbjct: 143 LIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIA 202

Query: 181 PYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
           P     G I S   + +N    EA ++   M  + G     E IA A +YLA+DEA+ +T
Sbjct: 203 P-----GFIKSAMTDKLNEKQKEAIMAMIPMKRM-GI---GEEIAFATVYLASDEAAYLT 253

Query: 236 GLNLVVDGG 244
           G  L ++GG
Sbjct: 254 GQTLHINGG 262

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  158 bits (403), Expect = 2e-47
 Identities = 57/260 (21%), Positives = 103/260 (39%), Gaps = 30/260 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
              + A+IT G  G+G    +     G  V +    D       +     + E + ++  
Sbjct: 5   RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV---DRGFASVLDTPKSDLDRVLAVNTTG 113
           DVT ++++  +V+ A++ +GK+D + NNAG      +     +D  + + + ++  N T 
Sbjct: 65  DVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKL---VDYEEDEWNEMIQGNLTA 121

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAEL 169
            F   K    VM  Q+ G I+                   A+  +K G+++L K +A E 
Sbjct: 122 VFHLLKLVVPVMRKQNFGRIINYGF--QGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEE 179

Query: 170 RQYGLRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAAL 224
            +YG+  N V P     G I      +      +       +G   G     E IA    
Sbjct: 180 AEYGITANMVCP-----GDIIGEMKEATIQEARQLKEHNTPIGRS-GT---GEDIARTIS 230

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +L  D++  +TG  + V G 
Sbjct: 231 FLCEDDSDMITGTIIEVTGA 250

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  158 bits (402), Expect = 3e-47
 Identities = 66/260 (25%), Positives = 117/260 (45%), Gaps = 31/260 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           +   VA++TGGASG+G A  K   + GA+VV+ D++   G+ +   LG+   +   DVT 
Sbjct: 7   IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADVTD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS--DLDRVLAVNTTGGFLGA 118
           E  + + +D A    G L I+ N AG  +       D   S     +++ +N  G F   
Sbjct: 64  EAAVASALDLA-ETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVL 122

Query: 119 KHAARVMI--------PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
           + AA  +          + +G I+ TAS       IG  AY+ SK G++ +   +A +L 
Sbjct: 123 RLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 182

Query: 171 QYGLRVNCVSP----YGLVSGIS--SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
            + +RV  ++P      L++ +   +R S+   +     S +G       N +     A+
Sbjct: 183 SHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVP--HPSRLG-------NPDEYGALAV 233

Query: 225 YLATDEASDVTGLNLVVDGG 244
           ++   E   + G  + +DG 
Sbjct: 234 HII--ENPMLNGEVIRLDGA 251

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  160 bits (406), Expect = 3e-47
 Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 45/288 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
               VA++TG A  +G + A+  H  G  V +     A   + L   L  +       + 
Sbjct: 44  PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 103

Query: 56  CDVTSE-----------------DEITNLVDTAVAKYGKLDIMYNNAGIVDRG------- 91
            D+++                       LV      +G+ D++ NNA             
Sbjct: 104 ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 163

Query: 92  -----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP------QHKGCILFTASAC 140
                     +  ++    +   N    +   K  A  +             I+    A 
Sbjct: 164 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 223

Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
           T    +G   YT++K  +  L +  A EL    +RVN V P GL       + + PA+ E
Sbjct: 224 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL---SVLVDDMPPAVWE 279

Query: 201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
              S++  L  +  +A  +++  ++L + +A  +TG  + VDGG+S+ 
Sbjct: 280 GHRSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 326

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  159 bits (403), Expect = 3e-47
 Identities = 57/288 (19%), Positives = 104/288 (36%), Gaps = 45/288 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
               VA++TG A  +G + A+  H  G  V +     A   + L   L  +       + 
Sbjct: 7   PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQ 66

Query: 56  CDVTSE-----------------DEITNLVDTAVAKYGKLDIMYNNAGIVDRG------- 91
            D+++                       LV      +G+ D++ NNA             
Sbjct: 67  ADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDE 126

Query: 92  -----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP------QHKGCILFTASAC 140
                     +  ++    +   N    +   K  A  +             I+    A 
Sbjct: 127 DGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM 186

Query: 141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE 200
           T    +G   YT++K  +  L +  A EL    +RVN V P GL       + + PA+ E
Sbjct: 187 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-GL---SVLVDDMPPAVWE 242

Query: 201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA 248
              S++  L  +  +A  +++  ++L + +A  +TG  + VDGG+S+ 
Sbjct: 243 GHRSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 289

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  158 bits (402), Expect = 5e-47
 Identities = 68/252 (26%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
            E KVA++TG   GIG   AK+  ++ + V+          ++       G +      D
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ ++EI+ +++  + ++  +DI+ NNAGI        L     + + VL  N    F  
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF--LRMKNDEWEDVLRTNLNSLFYI 159

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +  ++ MI    G I+  +S       +G   Y+ SK G+I   K LA EL    + VN
Sbjct: 160 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 219

Query: 178 CVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
            ++P     G ISS   + I+  I +  +S    G + G     E +AN A +L++D++ 
Sbjct: 220 AIAP-----GFISSDMTDKISEQIKKNIISNIPAGRM-GT---PEEVANLACFLSSDKSG 270

Query: 233 DVTGLNLVVDGG 244
            + G   V+DGG
Sbjct: 271 YINGRVFVIDGG 282

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  156 bits (396), Expect = 8e-47
 Identities = 41/249 (16%), Positives = 87/249 (34%), Gaps = 27/249 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           +     I+ GG   +G+A  + F +NG  V+  D+  N  QA +  L      +  +   
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-DQADSNIL------VDGNKNW 53

Query: 61  EDEITNLVDTAVA--KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
            ++  ++++   +  +  ++D ++  AG    G ++       + D ++  +     + A
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY--GLRV 176
           K A   + P   G +  T +A           Y ++K  +  L   LAA+         V
Sbjct: 113 KLATTHLKPG--GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAV 170

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS-DVT 235
             + P   +        +N   +                   I+   L   T+ +S   +
Sbjct: 171 LTIMP-VTL-----DTPMNRKWMPN------ADHSSWTPLSFISEHLLKWTTETSSRPSS 218

Query: 236 GLNLVVDGG 244
           G  L +   
Sbjct: 219 GALLKITTE 227

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  158 bits (402), Expect = 1e-46
 Identities = 78/275 (28%), Positives = 122/275 (44%), Gaps = 53/275 (19%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--------------------- 39
           ++G+V I+TG   GIG A A  F   GA+VV+ D+   L                     
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA 84

Query: 40  -GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLD 97
            G+A+A            +V   D+   L+ TAV  +G LD++ NNAGIV DR  A+  +
Sbjct: 85  GGEAVAD---------GSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSE 135

Query: 98  TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK------GCILFTASACTEIAGIGSPAY 151
               + D V+AV+  G F   +HAA       K      G I+ T+S       +G   Y
Sbjct: 136 ---EEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNY 192

Query: 152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR--NSINPAILEAFLSEMGNL 209
           + +K GI  L  + AAE+ +YG+ VN ++P        +R   ++   ++          
Sbjct: 193 SAAKAGIATLTLVGAAEMGRYGVTVNAIAP-----SARTRMTETVFAEMMATQDQ----- 242

Query: 210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
               +  E ++   ++L + EA DVTG    V+GG
Sbjct: 243 DFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGG 277

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  154 bits (393), Expect = 4e-46
 Identities = 74/254 (29%), Positives = 120/254 (47%), Gaps = 22/254 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L+GK AI+TG + G+G A A      GA +V+     +   D   +      G +V    
Sbjct: 3   LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFK-AAGINVVVAK 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV + +++ N+V TA+  +G++DI+ NNAGI        L   + D D VL  N    +
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTLM--LKMSEKDWDDVLNTNLKSAY 119

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           L  K  +++M+ Q  G I+   S    I   G   Y  SK G+I   K +A E    G+ 
Sbjct: 120 LCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIY 179

Query: 176 VNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDE 230
            N V+P     G I +   + +   + E +L+   +    G     E +AN   +LA+D+
Sbjct: 180 CNAVAP-----GIIKTDMTDVLPDKVKEMYLNNIPLKRF-GT---PEEVANVVGFLASDD 230

Query: 231 ASDVTGLNLVVDGG 244
           ++ +TG  + +DGG
Sbjct: 231 SNYITGQVINIDGG 244

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  153 bits (390), Expect = 1e-45
 Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 28/257 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHC 56
           L+GKV+++TG   GIG A A+     G+ V+I     +    + + +A K G     +  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           ++ SE+ I    +        +DI+ NNAGI        L     D + VL VN TG FL
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKLF--LRMSLLDWEEVLKVNLTGTFL 122

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQY 172
             +++ R MI Q  G I+  +S    + G     G   Y+ +K G+I   K LA EL   
Sbjct: 123 VTQNSLRKMIKQRWGRIVNISS----VVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPR 178

Query: 173 GLRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLA 227
            + VN V+P     G I +     ++  I + +  +  +G   G     E +AN  L+L 
Sbjct: 179 NVLVNAVAP-----GFIETDMTAVLSEEIKQKYKEQIPLGRF-GS---PEEVANVVLFLC 229

Query: 228 TDEASDVTGLNLVVDGG 244
           ++ AS +TG  + V+GG
Sbjct: 230 SELASYITGEVIHVNGG 246

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  153 bits (389), Expect = 1e-45
 Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 19/252 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L  KVA++TG + GIG   A      GA VV         +     +   G     +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           ++  + I N      A+   +DI+ NNAGI        +   + +   V+  N +  F  
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLM--MRMSEDEWQSVINTNLSSIFRM 120

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           +K   R M+ +  G I+   S        G   Y  +K G+I   K LA E+    + VN
Sbjct: 121 SKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180

Query: 178 CVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEAS 232
            V+P     G I++   + +         ++   G + G+    + IA A  +LA++EA 
Sbjct: 181 VVAP-----GFIATDMTDKLTDEQKSFIATKIPSGQI-GE---PKDIAAAVAFLASEEAK 231

Query: 233 DVTGLNLVVDGG 244
            +TG  L V+GG
Sbjct: 232 YITGQTLHVNGG 243

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  154 bits (391), Expect = 1e-45
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           L+ +VAI+TG + GIG A A      GA V+     +   + +       G +      +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V     +  LV++ + ++G L+++ NNAGI     A  +     + D V+  N    F  
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGITQDQLA--MRMKDDEWDAVIDTNLKAVFRL 143

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYG 173
           ++   R M+    G I+   S    + G     G   Y  +K G+  + + LA E+   G
Sbjct: 144 SRAVLRPMMKARGGRIVNITS----VVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199

Query: 174 LRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLAT 228
           + VNCV+P     G I +     +      A  ++  +G L G     E IA+A  +LA+
Sbjct: 200 ITVNCVAP-----GFIDTDMTKGLPQEQQTALKTQIPLGRL-GS---PEDIAHAVAFLAS 250

Query: 229 DEASDVTGLNLVVDGG 244
            +A  +TG  L V+GG
Sbjct: 251 PQAGYITGTTLHVNGG 266

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  153 bits (390), Expect = 2e-45
 Identities = 69/261 (26%), Positives = 119/261 (45%), Gaps = 28/261 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE----------D 50
           L   +A++TG  SGIG A +      GA V   D+     Q     LG           +
Sbjct: 5   LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGN 64

Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGK-LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAV 109
                 DV+       L++   A + +   ++ + AGI    F  +L   + D D+V+AV
Sbjct: 65  HAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAV 122

Query: 110 NTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
           N  G FL  + AA+ ++    +G I+  +S   ++  +G   Y  SK G+I L +  A E
Sbjct: 123 NLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARE 182

Query: 169 LRQYGLRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAA 223
           L ++G+R N V P     G I++     +   +++       MG+L G     E +A+  
Sbjct: 183 LGRHGIRCNSVLP-----GFIATPMTQKVPQKVVDKITEMIPMGHL-GD---PEDVADVV 233

Query: 224 LYLATDEASDVTGLNLVVDGG 244
            +LA++++  +TG ++ V GG
Sbjct: 234 AFLASEDSGYITGTSVEVTGG 254

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  154 bits (392), Expect = 2e-45
 Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 38/262 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA------DVQDNLGQALACKLGEDVCYI 54
           L+GK  +ITGG SGIG A +  F + GA + IA      D  +   +    K G     +
Sbjct: 45  LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET--KQYVEKEGVKCVLL 102

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             D++ E    ++V   V + G L+I+ NN          +       L++   +N    
Sbjct: 103 PGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYP-QQGLEYITAEQLEKTFRINIFSY 161

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP---AYTVSKYGIIALVKILAAELRQ 171
           F   K A   +  +    I+ TAS    +A  G+     Y+ +K  I+A  + L+  L Q
Sbjct: 162 FHVTKAALSHL--KQGDVIINTAS---IVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216

Query: 172 YGLRVNCVSPYGLVSG------ISSRNSINPAILEAFLSE--MGNLR-GQVLNAEGIANA 222
            G+RVN V+P     G      I S  S +   +  F S   M   R GQ      +A A
Sbjct: 217 KGIRVNGVAP-----GPIWTPLIPS--SFDEKKVSQFGSNVPMQ--RPGQ---PYELAPA 264

Query: 223 ALYLATDEASDVTGLNLVVDGG 244
            +YLA+ ++S VTG  + V+GG
Sbjct: 265 YVYLASSDSSYVTGQMIHVNGG 286

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  151 bits (384), Expect = 8e-45
 Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 20/253 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA---CKLGEDVCYIHC 56
           L+GKVA++TG + GIG A A    + GA VV+     +     +     KLG D   +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV + +++TN+V   V  +G++DI+ NNAG+        +   + + D V+  N  G FL
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLL--MRMKEEEWDTVINTNLKGVFL 119

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
             K  +R M+ Q  G I+  AS        G   Y  +K G+I L K  A EL    + V
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179

Query: 177 NCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEA 231
           N ++P     G I++   + ++  I    L         G+   A+ IANA  + A+D++
Sbjct: 180 NAIAP-----GFIATDMTDVLDENIKAEMLKLIPAAQF-GE---AQDIANAVTFFASDQS 230

Query: 232 SDVTGLNLVVDGG 244
             +TG  L VDGG
Sbjct: 231 KYITGQTLNVDGG 243

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  152 bits (386), Expect = 9e-45
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 12/201 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQ--ALACKLGEDVCYIHCD 57
           + G++ +ITG   GIG   A  F +  +K+V+ D+ +  L +  A    LG  V     D
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
            ++ ++I +      A+ G + I+ NNAG+V    + +  T    +++   VN    F  
Sbjct: 89  CSNREDIYSSAKKVKAEIGDVSILVNNAGVV--YTSDLFATQDPQIEKTFEVNVLAHFWT 146

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY---GL 174
            K     M   + G I+  ASA   ++     AY  SK+  +   K L  EL      G+
Sbjct: 147 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 206

Query: 175 RVNCVSPY----GLVSGISSR 191
           +  C+ P     G +   S+ 
Sbjct: 207 KTTCLCPNFVNTGFIKNPSTS 227

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  150 bits (382), Expect = 2e-44
 Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 20/249 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK ++ITG +SGIG+A A+L H+ G+KV+I+   +   ++L   L ++     C++ +
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLAN 71

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ++E +NL+     K   LDI+  NAGI     A  +     D D+V+ +N    F+  + 
Sbjct: 72  KEECSNLIS----KTSNLDILVCNAGITSDTLA--IRMKDQDFDKVIDINLKANFILNRE 125

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A + MI +  G I+  +S        G   Y  SK G+I + K L+ E+   G+ VN V+
Sbjct: 126 AIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVA 185

Query: 181 PYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVT 235
           P     G I S   + +N    EA + +  +G   G     E +A A  +LA++ AS +T
Sbjct: 186 P-----GFIKSDMTDKLNEKQREAIVQKIPLGTY-GI---PEDVAYAVAFLASNNASYIT 236

Query: 236 GLNLVVDGG 244
           G  L V+GG
Sbjct: 237 GQTLHVNGG 245

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  150 bits (381), Expect = 2e-44
 Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 30/258 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
              K A++TG + GIG + A    E G  V +      +  + + + +    G D   I 
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK-AKGVDSFAIQ 60

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            +V   DE+  ++   V+++G LD++ NNAGI       ++   + + D V+  N  G F
Sbjct: 61  ANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL--LMRMKEQEWDDVIDTNLKGVF 118

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQ 171
              + A   M+ Q  G I+  +S    + G     G   Y  +K G+I L K  A EL  
Sbjct: 119 NCIQKATPQMLRQRSGAIINLSS----VVGAVGNPGQANYVATKAGVIGLTKSAARELAS 174

Query: 172 YGLRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYL 226
            G+ VN V+P     G I S   ++++  + E  L++  +    GQ      IAN   +L
Sbjct: 175 RGITVNAVAP-----GFIVSDMTDALSDELKEQMLTQIPLARF-GQ---DTDIANTVAFL 225

Query: 227 ATDEASDVTGLNLVVDGG 244
           A+D+A  +TG  + V+GG
Sbjct: 226 ASDKAKYITGQTIHVNGG 243

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  157 bits (400), Expect = 3e-44
 Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 52/267 (19%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--------------------- 39
            + KV IITG   G+G   +  F + GAKVV+ D+   L                     
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG 65

Query: 40  GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDT 98
           G A+A          + +V   D+I   V+TAV  +G + ++ NNAGI+ D     + + 
Sbjct: 66  GVAVAD---------YNNVLDGDKI---VETAVKNFGTVHVIINNAGILRDASMKKMTE- 112

Query: 99  PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI 158
              D   V+ V+  G F   K A      Q  G I+ T+S        G   Y  +K  +
Sbjct: 113 --KDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSAL 170

Query: 159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEG 218
           +   + LA E  +Y ++ N ++P        SR      + E+ +        + L  E 
Sbjct: 171 LGFAETLAKEGAKYNIKANAIAP-----LARSR------MTESIMPPPM---LEKLGPEK 216

Query: 219 IANAALYLATDEASDVTGLNLVVDGGF 245
           +A   LYL++ E  ++TG    V  GF
Sbjct: 217 VAPLVLYLSSAEN-ELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  145 bits (368), Expect = 1e-39
 Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 40/255 (15%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV----------QDNLGQALACKLGED 50
           L+ KV +ITG  +G+G   AK F + GAKVV+ D           +   G+A        
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPD----- 374

Query: 51  VCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAV 109
                 DV    +   ++   + KYG +DI+ NNAGI+ DR FA +    K + D V  V
Sbjct: 375 ----QHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRDRSFAKM---SKQEWDSVQQV 425

Query: 110 NTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
           +  G F  ++ A    + +  G I+   S        G   Y+ SK GI+ L K +A E 
Sbjct: 426 HLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEG 485

Query: 170 RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
            +  ++VN V+P        +       +  + + E       + +A+ +A   +YL TD
Sbjct: 486 AKNNIKVNIVAP-----HAETA------MTLSIMREQD---KNLYHADQVAPLLVYLGTD 531

Query: 230 EASDVTGLNLVVDGG 244
           +   VTG    + GG
Sbjct: 532 DV-PVTGETFEIGGG 545

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  150 bits (381), Expect = 4e-44
 Identities = 63/260 (24%), Positives = 114/260 (43%), Gaps = 23/260 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQAL----ACKLGEDVCYIH 55
           ++GK+A++T G+SG+G A+A     NGA++++    ++ L  A     +   G  V  + 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D+    +I  L +      G  DI+  + G    G    ++    D D    +      
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVYSTGGPRPG--RFMELGVEDWDESYRLLARSAV 121

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              + AA  M+ +  G +++  S              + +  +I +V+ LA EL  +G+ 
Sbjct: 122 WVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVT 181

Query: 176 VNCVSP--------YGLVSGISSRNSINP-AILEAFLSE--MGNLRGQVLNAEGIANAAL 224
           VN V P          L    + R+ I     L++  S   MG + G+    E +A+   
Sbjct: 182 VNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRV-GK---PEELASVVA 237

Query: 225 YLATDEASDVTGLNLVVDGG 244
           +LA+++AS +TG  + VDGG
Sbjct: 238 FLASEKASFITGAVIPVDGG 257

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  150 bits (382), Expect = 9e-44
 Identities = 71/254 (27%), Positives = 110/254 (43%), Gaps = 28/254 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVC-YIH--- 55
            +G+V ++TG   G+G A A  F E GA VV+ D+  D  G        + V   I    
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 66

Query: 56  ----CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVN 110
                +  S +    LV TA+  +G++D++ NNAGI+ DR F+ + D    D D +  V+
Sbjct: 67  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISD---EDWDIIQRVH 123

Query: 111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
             G F   + A   M  Q+ G I+ TASA       G   Y+ +K G++ L   L  E R
Sbjct: 124 LRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR 183

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
           +  +  N ++P        SR      + E  + E      + L  E +A   L+L  + 
Sbjct: 184 KNNIHCNTIAP-----NAGSR------MTETVMPEDL---VEALKPEYVAPLVLWLCHES 229

Query: 231 ASDVTGLNLVVDGG 244
             +  G    V  G
Sbjct: 230 C-EENGGLFEVGAG 242

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  148 bits (376), Expect = 9e-44
 Identities = 63/233 (27%), Positives = 93/233 (39%), Gaps = 32/233 (13%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
               +ITG + GIG A A+L H  G +V +    +   QALA +L      +  DV  E 
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG-ALPLPGDVREEG 63

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
           +    V      +G+L  + NNAG+       V +    +   VL  N TG FLG +HA 
Sbjct: 64  DWARAVAAMEEAFGELSALVNNAGVG--VMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121

Query: 123 RVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
             ++ +  G I+   S    +AG     G  AY  SK+G++ L      +LR+  +RV  
Sbjct: 122 PALLRRGGGTIVNVGS----LAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVN 177

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLR---GQVLNAEGIANAALYLAT 228
           V P G V                  +            L  E +A A L+   
Sbjct: 178 VLP-GSVD-----------------TGFAGNTPGQAWKLKPEDVAQAVLFALE 212

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  148 bits (376), Expect = 1e-43
 Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 34/263 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-------------ADVQDNLGQALACKL 47
           L+GKVA++TG + GIG A AK    +GA V I              ++Q N G A +   
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS--- 61

Query: 48  GEDVCYIHCDVTSEDEITNLVDTAVAK------YGKLDIMYNNAGIVDRGFASVLDTPKS 101
                 I  ++ S   +  L  +   +        K DI+ NNAGI     A + +T + 
Sbjct: 62  ------IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIG--PGAFIEETTEQ 113

Query: 102 DLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL 161
             DR+++VN    F   + A   +  +    I+  +SA T I+     AY+++K  I  +
Sbjct: 114 FFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRISLPDFIAYSMTKGAINTM 171

Query: 162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN 221
              LA +L   G+ VN + P G V    +   ++  +++ + + +     ++   E IA+
Sbjct: 172 TFTLAKQLGARGITVNAILP-GFVKTDMNAELLSDPMMKQYATTISAF-NRLGEVEDIAD 229

Query: 222 AALYLATDEASDVTGLNLVVDGG 244
            A +LA+ ++  VTG  + V GG
Sbjct: 230 TAAFLASPDSRWVTGQLIDVSGG 252

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  147 bits (373), Expect = 3e-43
 Identities = 50/248 (20%), Positives = 92/248 (37%), Gaps = 36/248 (14%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+ K+A++TG   G+G    K    +     +    ++L  ALA   G  V  I  D+  
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEG--VEPIESDIVK 59

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E      VD  +     +D + + A +      ++     ++    L +N       ++ 
Sbjct: 60  EVLEEGGVD-KLKNLDHVDTLVHAAAVAR--DTTIEAGSVAEWHAHLDLNVIVPAELSRQ 116

Query: 121 AARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLRV 176
               +     GC+++  S     AG     G+  Y  SK+ +  L      E    G+RV
Sbjct: 117 LLPALR-AASGCVIYINS----GAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRV 171

Query: 177 NCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQV-LNAEGIANAALYLATD- 229
           + VSP G        G+                +  N R ++ +  + IANA  ++    
Sbjct: 172 STVSP-GPTNTPMLQGLMDS-------------QGTNFRPEIYIEPKEIANAIRFVIDAG 217

Query: 230 EASDVTGL 237
           E + +T +
Sbjct: 218 ETTQITNV 225

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  147 bits (374), Expect = 3e-43
 Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 22/254 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
           +  ++A +TGG  GIG +  +  H++G +VV     ++            LG D      
Sbjct: 11  MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG 70

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           +V   D      D   A+ G++D++ NNAGI  D  F  +      D   V+  N T  F
Sbjct: 71  NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTR---EDWQAVIDTNLTSLF 127

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              K     M+ +  G I+  +S   +    G   Y+ +K GI      LA E+   G+ 
Sbjct: 128 NVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVT 187

Query: 176 VNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDE 230
           VN VSP     G I +    +I P +LE  ++   +  L G     + I +   +LA++E
Sbjct: 188 VNTVSP-----GYIGTDMVKAIRPDVLEKIVATIPVRRL-GS---PDEIGSIVAWLASEE 238

Query: 231 ASDVTGLNLVVDGG 244
           +   TG +  ++GG
Sbjct: 239 SGFSTGADFSLNGG 252

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  147 bits (373), Expect = 4e-43
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 22/248 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              +  ++TGG  GIG A A+    +G KV +        + L          +  DVT 
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLFG--------VEVDVTD 64

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D +           G ++++ +NAG+    F  ++   +   ++V+  N TG F  A+ 
Sbjct: 65  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQR 122

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A+R M     G ++F  S            Y  SK G+I + + +A EL +  +  N V+
Sbjct: 123 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 182

Query: 181 PYGLVSGISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           P G    I +    +++  I +  L       + G       +A    +LA+++AS ++G
Sbjct: 183 P-GY---IDTDMTRALDERIQQGALQFIPAKRV-GT---PAEVAGVVSFLASEDASYISG 234

Query: 237 LNLVVDGG 244
             + VDGG
Sbjct: 235 AVIPVDGG 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  146 bits (372), Expect = 5e-43
 Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 29/255 (11%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDV 58
           + A+ITG + GIG A A    E+G  + I      +  + + +    +    V  +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
              +  T LV  A    G LD + NNAGI        +     D + VL  N +  F   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLL--VRMKDEDWEAVLEANLSAVFRTT 119

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGL 174
           + A ++M+    G I+   S    + GI    G   Y  SK G+I   + +A E  Q G+
Sbjct: 120 REAVKLMMKARFGRIVNITS----VVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175

Query: 175 RVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATD 229
            VN V+P     G I +     +   + EA+L +   G   G+    E +A A  +L ++
Sbjct: 176 TVNAVAP-----GFIETEMTERLPQEVKEAYLKQIPAGRF-GR---PEEVAEAVAFLVSE 226

Query: 230 EASDVTGLNLVVDGG 244
           +A  +TG  L VDGG
Sbjct: 227 KAGYITGQTLCVDGG 241

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  146 bits (371), Expect = 1e-42
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 22/248 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              +  ++TGG  GIG A A+ F + G KV I        +            + CD+T 
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA--------VKCDITD 70

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +++          +G ++++  NAG+       ++   + D   V+  N TG F   K 
Sbjct: 71  TEQVEQAYKEIEETHGPVEVLIANAGVTKDQL--LMRMSEEDFTSVVETNLTGTFRVVKR 128

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A R M+   KG ++  +S    +   G   Y  SK G++   + LA EL    +  N V+
Sbjct: 129 ANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVA 188

Query: 181 PYGLVSGISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           P G    + +     +        +S+  +G    +    E IA    +LA+D+AS +TG
Sbjct: 189 P-GF---VDTDMTKVLTDEQRANIVSQVPLGRY-AR---PEEIAATVRFLASDDASYITG 240

Query: 237 LNLVVDGG 244
             + VDGG
Sbjct: 241 AVIPVDGG 248

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  144 bits (366), Expect = 4e-42
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 18/186 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           + A++TGGASG+G AAA      G +VV+ D++           GED+ Y+  DVT E++
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRR---------EGEDLIYVEGDVTREED 53

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS--DLDRVLAVNTTGGFLGAKHA 121
           +   V  A  +   L  + + AG+         + P       RVL VN  G F   + A
Sbjct: 54  VRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 112

Query: 122 ARVMIPQ------HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           A  M          +G I+ TAS       IG  AY  SK G++AL    A EL  +G+R
Sbjct: 113 AWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIR 172

Query: 176 VNCVSP 181
           V  V+P
Sbjct: 173 VVTVAP 178

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  145 bits (367), Expect = 4e-42
 Identities = 69/255 (27%), Positives = 111/255 (43%), Gaps = 23/255 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
              +VA +TGG  G+GAA ++  H+ G  V ++  + N             G D      
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DV   +      +  +A +GK+D++ NNAGI  D  F  +      D D V+  +    F
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTK---GDWDAVMRTDLDAMF 139

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
              K     M+ +  G I+   S        G   Y  +K GI    K LA E  + G+ 
Sbjct: 140 NVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGIT 199

Query: 176 VNCVSPYGLVSG-ISSR--NSINPAILEAFLSE---MGNLRGQVLNAEGIANAALYLATD 229
           VN VSP     G +++    ++   +LEA +     +G L G+    + +A    +L +D
Sbjct: 200 VNTVSP-----GYLATAMVEAVPQDVLEAKILPQIPVGRL-GR---PDEVAALIAFLCSD 250

Query: 230 EASDVTGLNLVVDGG 244
           +A  VTG +L ++GG
Sbjct: 251 DAGFVTGADLAINGG 265

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  151 bits (383), Expect = 7e-42
 Identities = 66/261 (25%), Positives = 108/261 (41%), Gaps = 33/261 (12%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCY------ 53
            +G+VA++TG  +G+G   A LF E GAKVV+ D+   + G   + +  + V        
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG 76

Query: 54  -----IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVL 107
                 +  V    ++   ++TA+  +G++DI+ NNAGI+ DR      +    D + V 
Sbjct: 77  GEAVADYNSVIDGAKV---IETAIKAFGRVDILVNNAGILRDRSLVKTSE---QDWNLVN 130

Query: 108 AVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAA 167
            V+  G F   + A   M  Q+ G I+ T+S        G   YT +K G+I L   +A 
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAI 190

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           E  +  +  N + P        SR      + E  L ++       L  + IA    YL 
Sbjct: 191 EGARNNVLCNVIVPTAA-----SR------MTEGILPDIL---FNELKPKLIAPVVAYLC 236

Query: 228 TDEASDVTGLNLVVDGGFSVA 248
            +   D         G  +  
Sbjct: 237 HESCEDNGSYIESAAGWATKL 257

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  141 bits (358), Expect = 6e-41
 Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 23/252 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIHCDV 58
            V ++TG + GIG A A    + G KV++     A   + + + +    G        DV
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIE-AYGGQAITFGGDV 60

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           + E ++  ++ TA+  +G +D++ NNAGI        +   KS  D V+ +N TG FL  
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLL--IRMKKSQWDEVIDLNLTGVFLCT 118

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           + A ++M+ + KG I+  AS    I  IG   Y  +K G+I   K  A E     + VN 
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178

Query: 179 VSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLAT-DEAS 232
           V P     G I+S     +   + +  L    +G   GQ    E +A    +LA    AS
Sbjct: 179 VCP-----GFIASDMTAKLGEDMEKKILGTIPLGRT-GQ---PENVAGLVEFLALSPAAS 229

Query: 233 DVTGLNLVVDGG 244
            +TG    +DGG
Sbjct: 230 YITGQAFTIDGG 241

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  141 bits (359), Expect = 8e-41
 Identities = 79/251 (31%), Positives = 122/251 (48%), Gaps = 18/251 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-----ADVQDNLGQALACKLGEDVCYIH 55
           L  ++A++TG + GIG A A      GAKV +     A   D +  A+A   G +   + 
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA-AAGGEAFAVK 84

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV+ E E+  L    + ++G+LD++ NNAGI        L   + D   VL +N  G F
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTLL--LRMKRDDWQSVLDLNLGGVF 142

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           L ++ AA++M+ Q  G I+  AS   E+   G   Y+ +K G+I L K +A EL   G+ 
Sbjct: 143 LCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGIT 202

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAF-LSEMGNLRGQVLNAEGIANAALYLATDEASD- 233
           VN V+P G ++   +       +LE   L   G        A  +A    +LA D A+  
Sbjct: 203 VNAVAP-GFIATDMTSELAAEKLLEVIPLGRYGE-------AAEVAGVVRFLAADPAAAY 254

Query: 234 VTGLNLVVDGG 244
           +TG  + +DGG
Sbjct: 255 ITGQVINIDGG 265

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  142 bits (360), Expect = 8e-41
 Identities = 40/192 (20%), Positives = 69/192 (35%), Gaps = 12/192 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL----GEDVCYIH 55
           L+GK  I+TG + GIG   A    + GA VV+    ++ L Q +             YI 
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGAASAHYIA 84

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
             +         V  A    G LD++  N         ++       + + + VN     
Sbjct: 85  GTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLSYV 142

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL- 174
           +    A   M+ Q  G I+  +S   ++A     AY+ SK+ +      +  E     + 
Sbjct: 143 VLTVAALP-MLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVN 201

Query: 175 -RVNCVSPYGLV 185
             +      GL+
Sbjct: 202 VSITLCVL-GLI 212

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  136 bits (346), Expect = 3e-39
 Identities = 47/235 (20%), Positives = 87/235 (37%), Gaps = 29/235 (12%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHCD 57
           E KVA+ITG + GIG A A+    +G  + +     D  + +   L  + G +V Y H D
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+  + +       + ++G +D++  NAG+    F  + +  + +   ++ VN  G +  
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLG--YFKRLEELSEEEFHEMIEVNLLGVWRT 118

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGI---GSPAYTVSKYGIIALVKILAAELRQYGL 174
            K     +       ++ T+     ++         Y  +K+   ALV+    E     +
Sbjct: 119 LKAFLDSLKRTGGLALVTTSD----VSARLIPYGGGYVSTKWAARALVRTFQIE--NPDV 172

Query: 175 RVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           R   + P G V +                           L  + IA A   L  
Sbjct: 173 RFFELRP-GAVDTYFGGSKP------------GKPKEKGYLKPDEIAEAVRCLLK 214

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  139 bits (352), Expect = 3e-38
 Identities = 73/259 (28%), Positives = 109/259 (42%), Gaps = 35/259 (13%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVA++TG A GIGA  A++F  +GA VV  DV                  +  DVT+
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTA 270

Query: 61  EDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDT-----PKSDLDRVLAVNTTGG 114
           +D +  +       +G K+DI+ NNAGI  R      D       +   D V+AVN    
Sbjct: 271 DDAVDKITAHVTEHHGGKVDILVNNAGIT-R------DKLLANMDEKRWDAVIAVNLLAP 323

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELR 170
               +           G ++  +S    +AGI    G   Y  +K G+I L + LA  L 
Sbjct: 324 QRLTEGLVGNGTIGEGGRVIGLSS----MAGIAGNRGQTNYATTKAGMIGLAEALAPVLA 379

Query: 171 QYGLRVNCVSPYGLVSG-ISSR--NSINPAILEAFLSE--MGNLRGQVLNAEGIANAALY 225
             G+ +N V+P     G I ++   +I  A  E       +    GQ      +A    Y
Sbjct: 380 DKGITINAVAP-----GFIETKMTEAIPLATREVGRRLNSLFQG-GQ---PVDVAELIAY 430

Query: 226 LATDEASDVTGLNLVVDGG 244
            A+  ++ VTG  + V G 
Sbjct: 431 FASPASNAVTGNTIRVCGQ 449

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  131 bits (332), Expect = 5e-37
 Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 25/255 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLF---HENGAKVVIADVQDNLGQALACKLGED-----VC 52
           L   V ++TG + G G A A         G+ ++++   +++ + L  +LG       V 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 53  YIHCDVTSEDEITNLVDTAVAKYG----KLDIMYNNAGIV-DRGFASVLDTPKSDLDRVL 107
               D+ +E  +  L+            +  ++ NNA  + D     +     ++++   
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 108 AVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           A+N T                      ++  +S C      G   Y   K     L ++L
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVL 183

Query: 166 AAELRQYGLRVNCVSPYGLV----SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN 221
           AAE     +RV   +P G +      ++   S +P +         +  G +++    A 
Sbjct: 184 AAEEP--SVRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSD--GALVDCGTSAQ 238

Query: 222 AALYLATDEASDVTG 236
             L L   + +  +G
Sbjct: 239 KLLGLL-QKDTFQSG 252

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  130 bits (330), Expect = 1e-36
 Identities = 60/239 (25%), Positives = 104/239 (43%), Gaps = 28/239 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKL---GEDVCYIHC 56
           +  KV +ITG + GIG   A+     GAK+++ A  Q  + +A+A ++   G        
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT    +      AV  +G++D++ NNAG++    + +      + +R++ VN  G   
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVM--PLSPLAAVKVDEWERMIDVNIKGVLW 118

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQ- 171
           G      +M  Q  G I+   S    I  +     +  Y  +K+     V+ ++  LRQ 
Sbjct: 119 GIGAVLPIMEAQRSGQIINIGS----IGALSVVPTAAVYCATKFA----VRAISDGLRQE 170

Query: 172 -YGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
              +RV CV+P G+V S ++   + +   + A    M   R   L    IA A   +  
Sbjct: 171 STNIRVTCVNP-GVVESELAGTIT-HEETMAA----MDTYRAIALQPADIARAVRQVIE 223

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  130 bits (328), Expect = 2e-36
 Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 17/233 (7%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVT 59
              K+ +ITG +SGIG A A+ F E G  +++ A   + L +AL      +      DVT
Sbjct: 14  SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALN---LPNTLCAQVDVT 69

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            +      +  A   YG  D + NNAG++  G     +   ++  R+  VN  G   G +
Sbjct: 70  DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEA--NEWQRMFDVNVLGLLNGMQ 127

Query: 120 HAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLR 175
                M  ++ G I+  +S    IAG        AY  +K+ + A+ + +  E+    +R
Sbjct: 128 AVLAPMKARNCGTIINISS----IAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVR 183

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           V  ++P   V      ++ +  I + + +   ++ G VL A+ +A A L+   
Sbjct: 184 VMTIAP-SAVKTELLSHTTSQQIKDGYDAWRVDM-GGVLAADDVARAVLFAYQ 234

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  128 bits (325), Expect = 1e-35
 Identities = 58/245 (23%), Positives = 108/245 (44%), Gaps = 29/245 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGED-----VCYI 54
              ++A++TG + GIGAA A+   + G KVV  A    N+ + LA +         +   
Sbjct: 30  WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLIPY 88

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
            CD+++E++I ++     +++  +DI  NNAG+          T  S    +  VN    
Sbjct: 89  RCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGST--SGWKDMFNVNVLAL 146

Query: 115 FLGAKHAARVMIPQ--HKGCILFTASACTEIAGIGSPA------YTVSKYGIIALVKILA 166
            +  + A + M  +    G I+   S    ++G           Y+ +KY + AL + L 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININS----MSGHRVLPLSVTHFYSATKYAVTALTEGLR 202

Query: 167 AELRQYG--LRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
            ELR+    +R  C+SP G+V +  +    ++    E   +    +  + L  E +A A 
Sbjct: 203 QELREAQTHIRATCISP-GVVETQFA--FKLHDKDPEKAAATYEQM--KCLKPEDVAEAV 257

Query: 224 LYLAT 228
           +Y+ +
Sbjct: 258 IYVLS 262

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  126 bits (318), Expect = 5e-35
 Identities = 71/236 (30%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKL---GEDVCYIHC 56
           L+GKVA+ITG +SGIG A A+     GA V I A   + L +AL  +L   G  V  +  
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVLEL 63

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV     +   V + V   G LDI+ NNAGI+      V D   +D  R++  N  G   
Sbjct: 64  DVADRQGVDAAVASTVEALGGLDILVNNAGIM--LLGPVEDADTTDWTRMIDTNLLGLMY 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQY 172
             + A   ++ + KG ++  +S    IAG      +  Y  +K+G+ A  + L  E+ + 
Sbjct: 122 MTRAALPHLL-RSKGTVVQMSS----IAGRVNVRNAAVYQATKFGVNAFSETLRQEVTER 176

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           G+RV  + P G        +  + A  E +   +  +  + L A+ IA A  Y  T
Sbjct: 177 GVRVVVIEP-GTTDTELRGHITHTATKEMYEQRISQI--RKLQAQDIAEAVRYAVT 229

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  124 bits (315), Expect = 1e-34
 Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 14/229 (6%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           + ++TG  +G G    + F + G KV+     Q+ L Q L  +LG+++     DV +   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELGDNLYIAQLDVRNRAA 60

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
           I  ++ +  A++  +DI+ NNAG+   G          D + ++  N  G     +    
Sbjct: 61  IEEMLASLPAEWCNIDILVNNAGLA-LGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119

Query: 124 VMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            M+ ++ G I+   S     AG     G   Y  +K  +      L  +L    +RV  +
Sbjct: 120 GMVERNHGHIINIGS----TAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
            P GLV G    N               N     L  E ++ A  +++T
Sbjct: 176 EP-GLVGGTEFSNVRFKGDDGKAEKTYQNT--VALTPEDVSEAVWWVST 221

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  124 bits (315), Expect = 2e-34
 Identities = 56/247 (22%), Positives = 102/247 (41%), Gaps = 23/247 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           +  K  ++   + GIG A A +  + GA+V I    + L +    +      Y+ CD+  
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------YVVCDL-- 68

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
                  +D    K  ++DI+  NAG    GF    +    D    +           ++
Sbjct: 69  ----RKDLDLLFEKVKEVDILVLNAGGPKAGFF--DELTNEDFKEAIDSLFLNMIKIVRN 122

Query: 121 AARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
               M  +  G I+   S  + I+ I        ++  +   +K L+ E+  YG+ VNCV
Sbjct: 123 YLPAMKEKGWGRIVAITSF-SVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 181

Query: 180 SPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
           +P G       +  ++    +   S+  M  +  +    E IA+   +L +++AS +TG 
Sbjct: 182 AP-GWTETERVKELLSEEKKKQVESQIPMRRM-AK---PEEIASVVAFLCSEKASYLTGQ 236

Query: 238 NLVVDGG 244
            +VVDGG
Sbjct: 237 TIVVDGG 243

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  123 bits (310), Expect = 2e-34
 Identities = 29/179 (16%), Positives = 62/179 (34%), Gaps = 24/179 (13%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
               ++ G +  +G+A  +   +  A+V+ A              G     +  D+T+ D
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITA--------------GRHSGDVTVDITNID 47

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
                +     + GK+D + +  G     F+ + +         ++    G         
Sbjct: 48  S----IKKMYEQVGKVDAIVSATGSAT--FSPLTELTPEKNAVTISSKLGGQINLVLLGI 101

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
             +  +  G    T     E   +   +  ++   + A  K  A E+ + G+R+N VSP
Sbjct: 102 DSLNDK--GSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  120 bits (304), Expect = 4e-33
 Identities = 37/227 (16%), Positives = 76/227 (33%), Gaps = 22/227 (9%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVTSED 62
            + +ITG +SG+GA  AKL+   G    +    +  L   +   L  +V Y   D+ S  
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLSNNVGYRARDLASHQ 60

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
           E+  L +           + ++AG     F  + +     +  ++  N +      +   
Sbjct: 61  EVEQLFEQL---DSIPSTVVHSAGSG--YFGLLQEQDPEQIQTLIENNLSSAINVLRELV 115

Query: 123 RVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY 182
           +    Q    ++   S   +        Y   K+ +  L++ +  EL+   +++  V P 
Sbjct: 116 KRYKDQ-PVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP- 173

Query: 183 GLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           G + +                 S         ++AE  A        
Sbjct: 174 GGMATEFWET------------SGKSLDTSSFMSAEDAALMIHGALA 208

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  118 bits (299), Expect = 1e-32
 Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 15/180 (8%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT 65
            +ITG   G+G A A+     G  ++++  +      LA ++G     +  D+  E E  
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGARA--LPADLADELE-- 56

Query: 66  NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
                 + + G LD++ +  G   R   SV +  +  ++ +LA +     L A    +  
Sbjct: 57  --AKALLEEAGPLDLLVHAVGKAGRA--SVREAGRDLVEEMLAAH----LLTAAFVLKHA 108

Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
             Q     +F  +    +   G  AY  +K  + A ++    EL + G+ +  V     V
Sbjct: 109 RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL-PAV 167

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  120 bits (304), Expect = 1e-32
 Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 27/243 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENG---AKVVI-ADVQDNLGQALACKLGED-----V 51
           L  K  +ITG ++GIG A A  + E      K+++ A   + L + L   + ++     V
Sbjct: 31  LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKL-EELKKTIDQEFPNAKV 89

Query: 52  CYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT 111
                D+T  ++I   ++    ++  +DI+ NNAG    G   V      D+  V   N 
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKA-LGSDRVGQIATEDIQDVFDTNV 148

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAA 167
           T      +    +   ++ G I+   S    IAG         Y  SK+ + A    L  
Sbjct: 149 TALINITQAVLPIFQAKNSGDIVNLGS----IAGRDAYPTGSIYCASKFAVGAFTDSLRK 204

Query: 168 ELRQYGLRVNCVSPYGLV-SGIS-SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           EL    +RV  ++P GLV +  S  R   N    +    +        L A+ +A+  +Y
Sbjct: 205 ELINTKIRVILIAP-GLVETEFSLVRYRGNEEQAKNVYKDT-----TPLMADDVADLIVY 258

Query: 226 LAT 228
             +
Sbjct: 259 ATS 261

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  119 bits (300), Expect = 4e-32
 Identities = 56/237 (23%), Positives = 85/237 (35%), Gaps = 20/237 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGED--VCYIHCD 57
                  ITG  SG G A A+ F E G  +V+    ++ L QALA +L     V  +  D
Sbjct: 19  HMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELSAKTRVLPLTLD 77

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V     ++  VD    ++  L  + NNAG+   G          D D ++  N  G    
Sbjct: 78  VRDRAAMSAAVDNLPEEFATLRGLINNAGLA-LGTDPAQSCDLDDWDTMVDTNIKGLLYS 136

Query: 118 AKHAARVMIPQHKGC-ILFTASACTEIAGI----GSPAYTVSKYGIIALVKILAAELRQY 172
            +     +I    G  I+   S    +AG     GS  Y  +K  +      L  +L+  
Sbjct: 137 TRLLLPRLIAHGAGASIVNLGS----VAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGT 192

Query: 173 GLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
           G+RV  + P GL  S  S            +           +  E IA    ++  
Sbjct: 193 GVRVTNLEP-GLCESEFS--LVRFGGDQARYDKTYAGA--HPIQPEDIAETIFWIMN 244

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  115 bits (288), Expect = 3e-30
 Identities = 60/312 (19%), Positives = 96/312 (30%), Gaps = 97/312 (31%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
            + + A++TGG  GIG    K    NG  VV+       G     KL     E+V +   
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQL 69

Query: 57  DVTSEDE-ITNLVDTAVAKYGKLDIMYNNAGI---------------------------- 87
           DVT     +++L D     +GKLDI+ NNAG+                            
Sbjct: 70  DVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIY 129

Query: 88  VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG 147
                  ++       +  L +N  G     +    ++       I+  +S+   +  + 
Sbjct: 130 EKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVS 189

Query: 148 SP-------------------------------------------AYTVSKYGIIALVKI 164
           +                                            AYT SK  + A  ++
Sbjct: 190 NETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL 224
           LA ++     +VNCV P GLV                  +EM    G    AE  A   +
Sbjct: 250 LANKIP--KFQVNCVCP-GLVK-----------------TEMNYGIG-NYTAEEGAEHVV 288

Query: 225 YLATDEASDVTG 236
            +A       +G
Sbjct: 289 RIALFPDDGPSG 300

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score =  106 bits (266), Expect = 6e-27
 Identities = 40/197 (20%), Positives = 76/197 (38%), Gaps = 27/197 (13%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVV--------IADVQDNLGQALACKLGEDVCY 53
             K+ +ITG +SG G   A+     G +V                     A     D+  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           +  DV S+  +   +D  + + G++D++ +NAG +  G A            +  +N   
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAE--AFTPEQFAELYDIN--- 118

Query: 114 GFLGAKHAARVMIP----QHKGCILFTASACTEIAG-IGSP----AYTVSKYGIIALVKI 164
             L  +   R  +P    Q  G +++ +S     +   G+P     Y  +K  + A+   
Sbjct: 119 -VLSTQRVNRAALPHMRRQKHGLLIWISS----SSSAGGTPPYLAPYFAAKAAMDAIAVQ 173

Query: 165 LAAELRQYGLRVNCVSP 181
            A EL ++G+  + + P
Sbjct: 174 YARELSRWGIETSIIVP 190

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  105 bits (263), Expect = 8e-27
 Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 12/183 (6%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVV-----IADVQDNLGQALACKLGEDVCYIHCDV 58
           KV ++TG +SG G A A+     G  V+        + D     L     +    I  DV
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-----LVAAYPDRAEAISLDV 60

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T  + I  +    +A+YG++D++ NNAG    G  +  +T + +L  +  ++  G     
Sbjct: 61  TDGERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRDLFELHVFGPARLT 118

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
           +     M  +  G ++  +S   +++  G  AY+ +K  +  L + LA E+  +G++V  
Sbjct: 119 RALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLI 178

Query: 179 VSP 181
           V P
Sbjct: 179 VEP 181

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 97.8 bits (244), Expect = 4e-24
 Identities = 65/290 (22%), Positives = 98/290 (33%), Gaps = 84/290 (28%)

Query: 3   GKVAIITGGASGIGAAAAK-LFHENGAKVVIA--DVQDNLGQALACKL---GEDVCYIHC 56
             VA++TGG  GIG A  + L       VV+   DV    GQA   +L   G    +   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSPRFHQL 61

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSD-LDRVLAVNTTGGF 115
           D+     I  L D    +YG LD++ NNAGI    F     TP     +  +  N    F
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGI---AFKVADPTPFHIQAEVTMKTN----F 114

Query: 116 LGAKHAARVMIP--QHKGCILFTASAC--------------------------------- 140
            G +     ++P  + +G ++  +S                                   
Sbjct: 115 FGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKF 174

Query: 141 --------TEIAGIGSPAYTVSKYGIIALVKILAAEL----RQYGLRVNCVSPYGLVSGI 188
                    +  G  S AY V+K G+  L +I A +L    +   + +N   P G V   
Sbjct: 175 VEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP-GWVR-- 231

Query: 189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT--DEASDVTG 236
                          ++M   +      EG A   +YLA    +A    G
Sbjct: 232 ---------------TDMAGPKATKSPEEG-AETPVYLALLPPDAEGPHG 265

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 94.7 bits (236), Expect = 3e-23
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 24/204 (11%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKV-VIADVQD-NLGQALACKLGEDVCYIHCDVTSE 61
              ++TG   GIG    +   ++     +IA  +D      L       V  +   VT +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 62  DEITNLVDTAVAKYG--KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL--- 116
             +   V       G   L ++ NNAG++   + +  +  ++ +   L VNTT   L   
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVLL-SYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 117 --------GAKHAARVMIPQHKGCILFTASACTEIAGIGSP-------AYTVSKYGIIAL 161
                    A   +   +   +  ++  +S    I    S        AY +SK  I   
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 162 VKILAAELRQYGLRVNCVSPYGLV 185
            + LA +L+   + V    P G V
Sbjct: 183 GRTLAVDLKDDNVLVVNFCP-GWV 205

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 93.4 bits (233), Expect = 2e-22
 Identities = 60/283 (21%), Positives = 101/283 (35%), Gaps = 57/283 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCD 57
           L+GK  +++G  +   I    A++  E GA++V+       L Q +  +L      +  D
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 64

Query: 58  VTSEDEITNLVDTAVAKYG---KLDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTT- 112
           V +E+ + +L        G   KLD      G+V   GF      P++ +      +   
Sbjct: 65  VQNEEHLASLAGRVTEAIGAGNKLD------GVVHSIGFM-----PQTGMGINPFFDAPY 113

Query: 113 GGFLGA------------KHAARVMIPQHKGCIL---FTASACTEIAGIGSPAY---TVS 154
                             K    +M     G I+   F  S          PAY   TV+
Sbjct: 114 ADVSKGIHISAYSYASMAKALLPIM--NPGGSIVGMDFDPSRAM-------PAYNWMTVA 164

Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAI-----LEAFLS 204
           K  + ++ + +A E  +YG+R N V+  G +     S I        A      LE    
Sbjct: 165 KSALESVNRFVAREAGKYGVRSNLVAA-GPIRTLAMSAIVGGALGEEAGAQIQLLEEGWD 223

Query: 205 EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +   +   + +A  +A     L +D     TG  +  DGG   
Sbjct: 224 QRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 266

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 92.0 bits (229), Expect = 5e-22
 Identities = 41/204 (20%), Positives = 69/204 (33%), Gaps = 25/204 (12%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKV--VIADVQDNLG----QALACKLGEDVCYIHCD 57
              +ITG   G+G    K           +    ++       + LA     ++  +  D
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-HSNIHILEID 80

Query: 58  VTSEDEITNLVDT--AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           + + D    LV     V K   L++++NNAGI  +  A +      +L   L  NT    
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPI 139

Query: 116 L-----------GAKHAARVMIPQHKGCILFTASAC---TEIAGIGSPAYTVSKYGIIAL 161
           +            AK      +   +  I+  +S           G  AY  SK  + A 
Sbjct: 140 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 199

Query: 162 VKILAAELRQYGLRVNCVSPYGLV 185
            K L+ +L    +    + P G V
Sbjct: 200 TKSLSVDLYPQRIMCVSLHP-GWV 222

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 90.9 bits (226), Expect = 3e-21
 Identities = 48/257 (18%), Positives = 86/257 (33%), Gaps = 42/257 (16%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAK--VVIA------DVQDNLGQALACKLGED-VCYI 54
            V +ITG +SGIG   A     + ++   V A              A A       +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV     +    +      G++D++  NAG+   G   +    +  +  VL VN    
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLG--PLEALGEDAVASVLDVN---- 114

Query: 115 FLGAKHAARVMIP----QHKGCILFTASACTEIAG-IGSP---AYTVSKYGIIALVKILA 166
            +G     +  +P    +  G +L T S    + G +G P    Y  SK+ +  L + LA
Sbjct: 115 VVGTVRMLQAFLPDMKRRGSGRVLVTGS----VGGLMGLPFNDVYCASKFALEGLCESLA 170

Query: 167 AELRQYGLRVNCVSPYGLVSGISSRNSINPA-------------ILEAFLSEMGNLRGQV 213
             L  +G+ ++ +    + +    +   +P                +         R   
Sbjct: 171 VLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA 230

Query: 214 LNAEGIANAALYLATDE 230
            N E +A   L      
Sbjct: 231 QNPEEVAEVFLTALRAP 247

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 89.2 bits (222), Expect = 5e-21
 Identities = 68/278 (24%), Positives = 109/278 (39%), Gaps = 59/278 (21%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L GK  ++TG AS   I    A+  H  GA++      D L    +  A +LG D+    
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVL-Q 65

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD-RVLAVNTTGG 114
           CDV  +  I  +       + K D   ++ G     FA     P   LD   +   T  G
Sbjct: 66  CDVAEDASIDTMFAELGKVWPKFDGFVHSIG-----FA-----PGDQLDGDYVNAVTREG 115

Query: 115 FLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SK 155
           F  A            K    ++       +L T S       +G+    P Y V   +K
Sbjct: 116 FKIAHDISSYSFVAMAKACRSML--NPGSALL-TLSY------LGAERAIPNYNVMGLAK 166

Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISS-RNSINPAILEAFLSEMGNL 209
             + A V+ +A  +   G+RVN +S  G +     SGI   R  +        +      
Sbjct: 167 ASLEANVRYMANAMGPEGVRVNAISA-GPIRTLAASGIKDFRKMLAHCEAVTPI------ 219

Query: 210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             + +  E + N+A +L +D ++ ++G  + VDGGFS+
Sbjct: 220 -RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSI 256

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 88.8 bits (221), Expect = 9e-21
 Identities = 64/276 (23%), Positives = 107/276 (38%), Gaps = 55/276 (19%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIA---DVQDNLGQALACKLGEDVCYIH 55
           L GK  +ITG  S   I    AK  H  GA++        +D + + L  +         
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRV-EKLCAEFNPAAVL-P 81

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD-RVLAVNTTGG 114
           CDV S+ EI +L       +  LD + ++       FA     P+  L+   +   T  G
Sbjct: 82  CDVISDQEIKDLFVELGKVWDGLDAIVHSIA-----FA-----PRDQLEGNFIDCVTREG 131

Query: 115 FLGA-----------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKY 156
           F  A               R M+      ++   +       IG+    P+Y     +K 
Sbjct: 132 FSIAHDISAYSFAALAKEGRSMMKNRNASMV-ALTY------IGAEKAMPSYNTMGVAKA 184

Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRG 211
            + A V+  A  L + G++VN VS  G +     SGIS+   +       + + +  L+ 
Sbjct: 185 SLEATVRYTALALGEDGIKVNAVSA-GPIKTLAASGISNFKKM-----LDYNAMVSPLKK 238

Query: 212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            V +   + N   +L +D A+ +TG  + VD G+  
Sbjct: 239 NV-DIMEVGNTVAFLCSDMATGITGEVVHVDAGYHC 273

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 88.4 bits (220), Expect = 1e-20
 Identities = 65/275 (23%), Positives = 114/275 (41%), Gaps = 53/275 (19%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           LEGK A+ITG A+   I    AK FH  GA++        L    + +A   G D+    
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVV-K 77

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV+ +++I NL       +G LDI+ ++       +A     PK +    +   +  GF
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDIIVHSIA-----YA-----PKEEFKGGVIDTSREGF 127

Query: 116 LGA-----------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKYG 157
             A                 ++    G I+ T S        G+    P Y V   +K  
Sbjct: 128 KIAMDISVYSLIALTRELLPLMEGRNGAIV-TLSY------YGAEKVVPHYNVMGIAKAA 180

Query: 158 IIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQ 212
           + + V+ LA ++ ++G R+N +S  G V       I+  + +         +++      
Sbjct: 181 LESTVRYLAYDIAKHGHRINAISA-GPVKTLAAYSITGFHLL-----MEHTTKVNPFGKP 234

Query: 213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +   E + + A++L +D A  +TG  + VD G+ +
Sbjct: 235 I-TIEDVGDTAVFLCSDWARAITGEVVHVDNGYHI 268

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 88.0 bits (219), Expect = 2e-20
 Identities = 71/277 (25%), Positives = 107/277 (38%), Gaps = 57/277 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L+GK  ++TG  S   I    AK     GA++    V D         A + G ++ +  
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVF-P 70

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD-RVLAVNTTGG 114
           CDV  + +I  L  +    +  LD + ++ G     FA     P+  +    L   T   
Sbjct: 71  CDVADDAQIDALFASLKTHWDSLDGLVHSIG-----FA-----PREAIAGDFLDGLTREN 120

Query: 115 FLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SK 155
           F  A            K A  ++       +L T S       +G+    P Y     +K
Sbjct: 121 FRIAHDISAYSFPALAKAALPML--SDDASLL-TLSY------LGAERAIPNYNTMGLAK 171

Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLR 210
             + A V+ LA  L   G+RVN +S  G +     SGI S   I       F+     L+
Sbjct: 172 AALEASVRYLAVSLGAKGVRVNAISA-GPIKTLAASGIKSFGKI-----LDFVESNSPLK 225

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             V   E + NA  +L +D AS VT   + VD GF+ 
Sbjct: 226 RNV-TIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNA 261

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 86.9 bits (216), Expect = 5e-20
 Identities = 69/277 (24%), Positives = 107/277 (38%), Gaps = 58/277 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           +EGK  +I G A+   +    AK     GA+V +  + +        LA  LG  +    
Sbjct: 28  MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTV-P 86

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV+  + + N+      ++G LD + +        F+      K++L       + G F
Sbjct: 87  CDVSDAESVDNMFKVLAEEWGSLDFVVHAVA-----FS-----DKNELKGRYVDTSLGNF 136

Query: 116 LGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKY 156
           L +              A  +M   + G IL T S        G+    P Y V    K 
Sbjct: 137 LTSMHISCYSFTYIASKAEPLM--TNGGSIL-TLSY------YGAEKVVPHYNVMGVCKA 187

Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISS-RNSINPAILEAFLSEMGNLR 210
            + A VK LA +L +  +RVN +S  G V     SGIS     +      + L       
Sbjct: 188 ALEASVKYLAVDLGKQQIRVNAISA-GPVRTLASSGISDFHYILTWNKYNSPL------- 239

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +    + +  AALYL +D     TG  + VD G+ V
Sbjct: 240 RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCGYHV 276

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 86.9 bits (216), Expect = 5e-20
 Identities = 72/277 (25%), Positives = 107/277 (38%), Gaps = 58/277 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L+GK  +I G A+   I    AK   E GA++      D L    + LA +LG  V   H
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAG-H 87

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CDV     I  + +T   K+GKLD + +  G     F+      K +L       +   F
Sbjct: 88  CDVADAASIDAVFETLEKKWGKLDFLVHAIG-----FS-----DKDELTGRYIDTSEANF 137

Query: 116 LGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKY 156
                          + A ++M     G IL T +        G+    P Y V   +K 
Sbjct: 138 TNTMLISVYSLTAVSRRAEKLM--ADGGSIL-TLTY------YGAEKVMPNYNVMGVAKA 188

Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISS-RNSINPAILEAFLSEMGNLR 210
            + A VK LA +L    +RVN +S  G +     SGI   R  +      A L       
Sbjct: 189 ALEASVKYLAVDLGPQNIRVNAISA-GPIKTLAASGIGDFRYILKWNEYNAPL------- 240

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            + +  + + +  LY  +D +  VTG     D G+ V
Sbjct: 241 RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSGYHV 277

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 86.1 bits (214), Expect = 8e-20
 Identities = 66/277 (23%), Positives = 112/277 (40%), Gaps = 58/277 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L+GK  +I G A+   I    A+     GA +    + ++L    + +A +L     Y  
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVY-E 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTT-GG 114
            DV+ E+   +L ++     G LD + ++       FA     PK  L+  L + T+   
Sbjct: 63  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVA-----FA-----PKEALEGSL-LETSKSA 111

Query: 115 FLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SK 155
           F  A                 ++   +   +L T S       +GS      Y V   +K
Sbjct: 112 FNTAMEISVYSLIELTNTLKPLL--NNGASVL-TLSY------LGSTKYMAHYNVMGLAK 162

Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLR 210
             + + V+ LA +L ++ +RVN +S  G +     SGI+    I       +      LR
Sbjct: 163 AALESAVRYLAVDLGKHHIRVNALSA-GPIRTLASSGIADFRMI-----LKWNEINAPLR 216

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             V + E + NA +YL +  +S V+G    VD G+ V
Sbjct: 217 KNV-SLEEVGNAGMYLLSSLSSGVSGEVHFVDAGYHV 252

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 85.7 bits (213), Expect = 9e-20
 Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 56/276 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYIH 55
           L GK A++ G  +   +G A A    E GA+V ++   + L    + LA  LG  + +  
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLF-R 64

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DVT ++E+  L       +G LD + +        FA     P+  ++          +
Sbjct: 65  ADVTQDEELDALFAGVKEAFGGLDYLVHAIA-----FA-----PREAMEGRYIDTRRQDW 114

Query: 116 LGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SKY 156
           L A            + A  ++  +  G I+ T +         S    P Y V   +K 
Sbjct: 115 LLALEVSAYSLVAVARRAEPLL--REGGGIV-TLTY------YASEKVVPKYNVMAIAKA 165

Query: 157 GIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLRG 211
            + A V+ LA EL   G+RVN +S  G V       I     +        +++   LR 
Sbjct: 166 ALEASVRYLAYELGPKGVRVNAISA-GPVRTVAARSIPGFTKM-----YDRVAQTAPLRR 219

Query: 212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
            +   E + N  L+L +  AS +TG  + VD G+ +
Sbjct: 220 NI-TQEEVGNLGLFLLSPLASGITGEVVYVDAGYHI 254

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 85.8 bits (213), Expect = 1e-19
 Identities = 69/277 (24%), Positives = 111/277 (40%), Gaps = 56/277 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYI- 54
           LE K  +I G A+   I    AK+  + GAK+V    ++      + L  +L +   ++ 
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV S++E+ N  +      G +D +Y++       FA        DL    +  +  G
Sbjct: 90  QIDVQSDEEVINGFEQIGKDVGNIDGVYHSIA-----FA-----NMEDLRGRFSETSREG 139

Query: 115 FLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---SK 155
           FL A              A ++M     G I+   +       +G       Y V   +K
Sbjct: 140 FLLAQDISSYSLTIVAHEAKKLM--PEGGSIV-ATTY------LGGEFAVQNYNVMGVAK 190

Query: 156 YGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNLR 210
             + A VK LA +L    +RVN +S  G +      G+   N+I        + E   L+
Sbjct: 191 ASLEANVKYLALDLGPDNIRVNAISA-GPIRTLSAKGVGGFNTI-----LKEIEERAPLK 244

Query: 211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
             V +   +   A YL +D +S VTG N+ VD GF  
Sbjct: 245 RNV-DQVEVGKTAAYLLSDLSSGVTGENIHVDSGFHA 280

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 77/278 (27%), Positives = 115/278 (41%), Gaps = 58/278 (20%)

Query: 1   LEGKVAIITGGASG--IGAAAAKLFHENGAKVVIADVQDNLG---QALACKLGEDVCYI- 54
           LEG+  ++ G A+   I    A+  HE GA+++     + L      LA  L  +   I 
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTT-G 113
            CDVT++ EI     +   + G +  + +        FA      K +L     +NT   
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAHCIA-----FA-----NKEELVGEY-LNTNRD 113

Query: 114 GFLGA------------KHAARVMIPQHKGCILFTASACTEIAGIGS----PAYTV---S 154
           GFL A            K A  +M     G I+ T +       +G     P Y V   +
Sbjct: 114 GFLLAHNISSYSLTAVVKAARPMM--TEGGSIV-TLTY------LGGELVMPNYNVMGVA 164

Query: 155 KYGIIALVKILAAELRQYGLRVNCVSPYGLV-----SGISSRNSINPAILEAFLSEMGNL 209
           K  + A VK LAA+L +  +RVN +S  G +      GIS  NSI        + E   L
Sbjct: 165 KASLDASVKYLAADLGKENIRVNSISA-GPIRTLSAKGISDFNSI-----LKDIEERAPL 218

Query: 210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           R      E + + A +L +D +  +TG NL VD GF +
Sbjct: 219 RRTT-TPEEVGDTAAFLFSDMSRGITGENLHVDSGFHI 255

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 72.1 bits (177), Expect = 1e-14
 Identities = 56/299 (18%), Positives = 97/299 (32%), Gaps = 63/299 (21%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQA---------------- 42
           L G+ A + G A   G G A AK     GA+V +      LG                  
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 43  ------------LACKLGEDVCYIHCDVTSEDE--------ITNLVDTAVAKYGKLDIMY 82
                       L     +    +  D+             I  +        G +DI+ 
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPED-VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILV 125

Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           ++          +L+T +       + +        +H   +M     G  + T S    
Sbjct: 126 HSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM--NEGGSAV-TLSY--- 179

Query: 143 IAGIGS----PAYT----VSKYGIIALVKILAAEL-RQYGLRVNCVSPYGLV-----SGI 188
              + +    P Y      +K  + +  + LA E  ++YG+RVN +S  G +     S I
Sbjct: 180 ---LAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISA-GPLKSRAASAI 235

Query: 189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
                 +        S       + L+++ +  AAL+L +  A  V+G+ L VD G   
Sbjct: 236 GKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA 294

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 70.0 bits (172), Expect = 5e-14
 Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 4/87 (4%)

Query: 1  LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             +  +ITG  SG+GA  A+     GA V++A      G+A A  +   V     D+  
Sbjct: 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQD 73

Query: 61 EDEITNLVDTAVAKYGKLDIMYNNAGI 87
                 V          D++ NNAGI
Sbjct: 74 LSS----VRRFADGVSGADVLINNAGI 96

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 57/300 (19%), Positives = 99/300 (33%), Gaps = 71/300 (23%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQA---------------- 42
           L GK A I G A   G G A AK     GA++++      L                   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 43  ------------LACKLGEDVCYIHCDV--------TSEDEITNLVDTAVAKYGKLDIMY 82
                       L          +  DV        +S   +    +     +G +DI+ 
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPED-VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 83  NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE 142
           ++          +L+T +      ++ ++        H   +M     G  + + +    
Sbjct: 125 HSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM--NPGGASI-SLTY--- 178

Query: 143 IAGIGS----PAYTVS----KYGIIALVKILAAEL-RQYGLRVNCVSPYGLV-----SGI 188
              I S    P Y       K  + +  ++LA E  R+  +RVN +S  G +       I
Sbjct: 179 ---IASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA-GPLGSRAAKAI 234

Query: 189 SS-RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
                 I  +   A +        + L A+ + NAA +L +  AS +TG  + VD G + 
Sbjct: 235 GFIDTMIEYSYNNAPI-------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS 287

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 66.8 bits (163), Expect = 9e-13
 Identities = 62/312 (19%), Positives = 98/312 (31%), Gaps = 76/312 (24%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQA---------------- 42
           L GK A + G A   G G A  KL    GA+V++                          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 43  -------------------------LACKLGEDVCYIHCDVTSEDE--------ITNLVD 69
                                    L          +  +V+S           I+ + +
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQD-VPPEVSSNKRYAGVGGFTISEVAE 125

Query: 70  TAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH 129
              A  G++DI+ ++          +L T +      ++ ++       +H   +M  + 
Sbjct: 126 AVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM--KE 183

Query: 130 KGCILFTASACTEIAGIGS----PAYTVS----KYGIIALVKILAAEL-RQYGLRVNCVS 180
            G  L   S       I S    P Y       K  + +  + LA E  R   +RVNC+S
Sbjct: 184 GGSAL-ALSY------IASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS 236

Query: 181 PYGLV-----SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
             G +     S I          L    SE      + L ++ +  AAL+L +  A  VT
Sbjct: 237 A-GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVT 295

Query: 236 GLNLVVDGGFSV 247
           G  L VD G   
Sbjct: 296 GATLYVDNGLHA 307

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 44/332 (13%), Positives = 92/332 (27%), Gaps = 96/332 (28%)

Query: 3   GKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLG-------------------- 40
             +  I G     G G   AK   +   K++                             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 41  ---------------QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
                                  E       ++     I ++ +    KYGK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
                    +L+T +      L+ ++       K+   +M        + + +       
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM---KPQSSIISLTY------ 172

Query: 146 IGS----PAYT----VSKYGIIALVKILAAEL-RQYGLRVNCVSPYGL----VSGISSRN 192
             S    P Y      +K  + +  ++LA  L R Y +R+N +S   L     + I+  N
Sbjct: 173 HASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLN 232

Query: 193 SINPAILEAFLSEMGNLR-------------------------------------GQVLN 215
           +          +   +                                        Q L 
Sbjct: 233 NTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLL 292

Query: 216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +  I + A +L + E+  +TG  + VD G ++
Sbjct: 293 STDIGSVASFLLSRESRAITGQTIYVDNGLNI 324

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.0 bits (135), Expect = 2e-09
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 15/163 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDV 58
           ++GK A++  G   +G  +A L    GA+VV+   + +  QA A  + +   V     + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             +      V  A         ++    I            +S ++ V   N        
Sbjct: 177 ADDASRAEAVKGA-------HFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPLGIG 229

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL 161
              A     ++ G   F A       GIG     + +  I  L
Sbjct: 230 GIDATDKGKEYGGKRAFGA------LGIGGLKLKLHRACIAKL 266

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422

 Score = 50.5 bits (120), Expect = 2e-07
 Identities = 39/294 (13%), Positives = 80/294 (27%), Gaps = 56/294 (19%)

Query: 3   GKVAIITGGASGIGAAA--AKLFHENGAKVVI--------------ADVQDNLGQALACK 46
            K  ++ G +SG G A+     F      + +                         A  
Sbjct: 61  PKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKA 120

Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDR 105
            G     I+ D  S+     +++    + G ++D++  +     R      +  +S L  
Sbjct: 121 AGLYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKP 180

Query: 106 VLAVNTTGGF--------------------------LGAKHAARVMIPQHKGCILFTASA 139
           +    T                              +G +     +       +L   + 
Sbjct: 181 IGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGAR 240

Query: 140 CTEIAGIGSP-AYTVSKYGIIALVKI--------LAAELRQYGLRVNCVSPYGLVSGISS 190
               + IG+   + +  +G +   K+        L A L ++G   N      +V+  S+
Sbjct: 241 SVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300

Query: 191 RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG 244
              + P  +      M     +    EG       L  +      G    VD  
Sbjct: 301 AIPVMPLYISMVYKIM----KEKGLHEGTIEQLDRLFRERLYRQDGQPAEVDEQ 350

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 46.8 bits (111), Expect = 6e-06
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 23/154 (14%)

Query: 7    IITGGASGIGAAAAKLFHENGAKVVI--------ADVQDNLGQALACKLGEDVCYIHCDV 58
            +ITGG  G G   A+     GA+ ++           Q    +    + G  V     + 
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWR-RQGVQVLVSTSNA 1946

Query: 59   TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
            +S D   +L+     + G +  ++N A ++         TP+     V     +    G 
Sbjct: 1947 SSLDGARSLIT-EATQLGPVGGVFNLAMVLRDAVLENQ-TPE-FFQDVSKPKYS----GT 1999

Query: 119  KH---AARVMIPQHKGCILFTASACTEIAGIGSP 149
             +     R   P+    ++F++ +C      G+ 
Sbjct: 2000 ANLDRVTREACPELDYFVIFSSVSCG----RGNA 2029

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 5e-05
 Identities = 33/219 (15%), Positives = 63/219 (28%), Gaps = 87/219 (39%)

Query: 21  KLFHENGAK---VVIADVQD-NLGQA--LACK-LGEDVCYIHCDVTSED-EITNLVDTAV 72
           +L      +   +V+ +VQ+     A  L+CK L          +T+   ++T+ +    
Sbjct: 236 RLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL----------LTTRFKQVTDFLS--A 283

Query: 73  AKYGKLDIMYNNAGIVDRG----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ 128
           A    + + +++  +            LD    DL                       P+
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL-----------------------PR 320

Query: 129 HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR------QYGLRVNCVSPY 182
                       T      +P            + I+A  +R           VNC    
Sbjct: 321 ---------EVLT-----TNP----------RRLSIIAESIRDGLATWDNWKHVNC---D 353

Query: 183 GLVSGI-SSRNSINPAILEAFLSEMG------NLRGQVL 214
            L + I SS N + PA        +       ++   +L
Sbjct: 354 KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* Length = 405

 Score = 42.8 bits (100), Expect = 8e-05
 Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 16/129 (12%)

Query: 3   GKVAIITGGASGIGAAAAK--LFHENGAKVVIADVQDNLG--------------QALACK 46
            K  ++ G ++G G AA     F      + +   +                     A +
Sbjct: 47  PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQ 106

Query: 47  LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRV 106
            G     I+ D  S++     +D      G++D +  +     R      +   S L  +
Sbjct: 107 KGLYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPI 166

Query: 107 LAVNTTGGF 115
                  G 
Sbjct: 167 GNAVNLRGL 175

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	302
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.98
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.96
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.96
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.96
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.96
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.96
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.96
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.96
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.96
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.95
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.95
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.95
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.95
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.95
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.95
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.94
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.94
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.94
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.94
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.94
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.94
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.94
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.94
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.94
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.94
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.94
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.94
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.94
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.94
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.94
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.94
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.94
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.93
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.93
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.93
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.93
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.93
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.93
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.93
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.93
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.93
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.93
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.92
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.92
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.92
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.92
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.92
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.92
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.92
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.92
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.92
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.91
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.91
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.91
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.91
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.91
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.9
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.9
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.9
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.9
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.9
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.89
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.89
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.89
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.89
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.89
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.89
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.89
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.88
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.88
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.87
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.84
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.83
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.83
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.83
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.83
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.83
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.82
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.8
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.79
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.78
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.74
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.74
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.72
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.71
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.45
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.37
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.14
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.99
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.94
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.77
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.76
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.76
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.65
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.65
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.64
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.63
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.56
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.54
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.49
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.44
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.43
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.43
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.41
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.4
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.39
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.39
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.38
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.37
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.36
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.35
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.34
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.34
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.33
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.22
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.19
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.18
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.16
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.1
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.09
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.08
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.07
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.07
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.06
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.02
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.0
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.0
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.99
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.98
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.91
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.89
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.88
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.88
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.87
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.86
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.83
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.81
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.8
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.78
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.77
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.75
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.75
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.74
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.73
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.7
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.7
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.7
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.66
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.65
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.65
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.62
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.57
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.53
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.5
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.45
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.44
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.43
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.43
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.42
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.39
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.38
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.36
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.32
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.29
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.28
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.27
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.26
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.17
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.15
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.15
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.13
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.13
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.1
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.1
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.07
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.07
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.05
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.02
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.01
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.99
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.99
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.98
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.96
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.95
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.94
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.93
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.93
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.9
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.9
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.86
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.83
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.83
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.8
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.79
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.78
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.76
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.75
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.74
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.71
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	96.71
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.7
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.66
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.64
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.62
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.61
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.59
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.56
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	96.51
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.51
1lnq_A	336	MTHK channels, potassium channel related protein;	96.49
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.49
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.46
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.46
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.46
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.43
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.41
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.38
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.36
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.36
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	96.32
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.29
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.23
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	96.21
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.18
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	96.17
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.14
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.14
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.14
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.14
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.04
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	95.99
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.97
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.97
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.92
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	95.92
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.91
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.91
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.87
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.85
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.85
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.81
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.74
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	95.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.7
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.69
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.67
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	95.66
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	95.66
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.61
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.6
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.57
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.56
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	95.56
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.48
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.47
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.46
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.43
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.36
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.31
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	95.31
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.26
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	95.26
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	95.25
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.25
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	95.19
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.18

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.1e-57  Score=391.06  Aligned_cols=245  Identities=34%  Similarity=0.508  Sum_probs=222.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.++||+
T Consensus         5 L~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            5 LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999999888776665   578999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+... ..++.+.+.++|++++++|+.|+|+++++++|+|++++.|+||++||.++..+.++..+|++||+|
T Consensus        85 iDiLVNNAGi~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaa  163 (254)
T 4fn4_A           85 IDVLCNNAGIMDG-VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHG  163 (254)
T ss_dssp             CCEEEECCCCCCT-TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHH
T ss_pred             CCEEEECCcccCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHH
Confidence            9999999997643 257889999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHH-HHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL-EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.+|+|++|.|++++|||||+|+||+|.||+.......++.. +...... ++.+|+.+|+|+|++++||+|+.++++||
T Consensus       164 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~~R~g~pediA~~v~fLaSd~a~~iTG  242 (254)
T 4fn4_A          164 LIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLM-SLSSRLAEPEDIANVIVFLASDEASFVNG  242 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHH-TTCCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcC-CCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999999999999999999987665444433 3333333 44589999999999999999999999999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      |.|.+|||+++
T Consensus       243 ~~i~VDGG~t~  253 (254)
T 4fn4_A          243 DAVVVDGGLTV  253 (254)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEeCCCccc
Confidence            99999999875

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=4.5e-56  Score=381.34  Aligned_cols=242  Identities=28%  Similarity=0.362  Sum_probs=219.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            57999999999999999999999999999999999998887766555   568899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+|+++++++|+|.+ ++.|+||++||.++..+.++..+|++||+
T Consensus        87 iDiLVNNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKa  164 (255)
T 4g81_D           87 VDILINNAGIQYR--KPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKG  164 (255)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHH
T ss_pred             CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHH
Confidence            9999999998765  68999999999999999999999999999999965 45799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      |+.+|+|++|.||+++|||||+|+||+|.||+.......++..+.+... .| .+|+.+|+|+|++++||+|+.++++||
T Consensus       165 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~-~P-l~R~g~pediA~~v~fL~S~~a~~iTG  242 (255)
T 4g81_D          165 GIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSS-TP-SQRWGRPEELIGTAIFLSSKASDYING  242 (255)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHH-ST-TCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhC-CC-CCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence            9999999999999999999999999999999986554444444443333 33 489999999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      |.|.+|||+.
T Consensus       243 ~~i~VDGG~~  252 (255)
T 4g81_D          243 QIIYVDGGWL  252 (255)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCeE
Confidence            9999999975

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8.2e-55  Score=376.85  Aligned_cols=242  Identities=28%  Similarity=0.389  Sum_probs=214.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++..++++.++..+.+|++|+++++++++++.+++|++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999999998999888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.|+|+++++++|+|++  .|+||++||.++..+.++..+|++||+|+..
T Consensus       107 LVNNAG~~~~--~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~  182 (273)
T 4fgs_A          107 LFVNAGGGSM--LPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRS  182 (273)
T ss_dssp             EEECCCCCCC--CCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHH
Confidence            9999998765  68999999999999999999999999999999964  5899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHHHHH---HHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAILEA---FLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      |+|+++.||+++|||||+|+||+|.||+....... +...+.   .+.... |.+|+.+|+|+|++++||+|+.++++||
T Consensus       183 ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-PlgR~g~peeiA~~v~FLaSd~a~~iTG  261 (273)
T 4fgs_A          183 FARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQV-PMGRVGRAEEVAAAALFLASDDSSFVTG  261 (273)
T ss_dssp             HHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHS-TTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcC-CCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence            99999999999999999999999999987665322 212121   222222 3499999999999999999999999999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      |.|.+|||.+.
T Consensus       262 ~~i~VDGG~s~  272 (273)
T 4fgs_A          262 AELFVDGGSAQ  272 (273)
T ss_dssp             CEEEESTTTTT
T ss_pred             CeEeECcChhh
Confidence            99999999763

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=2.8e-54  Score=366.21  Aligned_cols=233  Identities=29%  Similarity=0.388  Sum_probs=204.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++   ..+.++..+.+|++|++++++++    +++|++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~----~~~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA---PRHPRIRREELDITDSQRLQRLF----EALPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS---CCCTTEEEEECCTTCHHHHHHHH----HHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh---hhcCCeEEEEecCCCHHHHHHHH----HhcCCCCE
Confidence            479999999999999999999999999999999998876543   22467899999999999977665    46899999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+..    +..+.+.++|++++++|+.|+|+++++++|+|+++ .|+||++||.++..+.++..+|++||+|+..
T Consensus        82 LVNNAGi~~----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~  156 (242)
T 4b79_A           82 LVNNAGISR----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQ  156 (242)
T ss_dssp             EEECCCCCC----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred             EEECCCCCC----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHH
Confidence            999999753    67788999999999999999999999999999754 6999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|+++.||+++|||||+|+||+|.||+.......++..+.+....  |.+|+.+|+|+|++++||+|+.++++|||.|.
T Consensus       157 ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~--PlgR~g~peeiA~~v~fLaSd~a~~iTG~~l~  234 (242)
T 4b79_A          157 LTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRT--PLARWGEAPEVASAAAFLCGPGASFVTGAVLA  234 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTC--TTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCchhcCccCceEE
Confidence            9999999999999999999999999999887666666666655543  34999999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+..
T Consensus       235 VDGG~la  241 (242)
T 4b79_A          235 VDGGYLC  241 (242)
T ss_dssp             ESTTGGG
T ss_pred             ECccHhh
Confidence            9999753

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.5e-54  Score=368.60  Aligned_cols=238  Identities=30%  Similarity=0.405  Sum_probs=210.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+... ..+..+..+.++.++.+|++|+++++++++     ++++|
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~g~iD   81 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFT-----DAGFD   81 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----TTCCC
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----hCCCC
Confidence            579999999999999999999999999999999998642 333444557789999999999999887764     47999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||+...  .++.+.+.++|++++++|+.|+|+++++++|+|.+++ .|+||++||.++..+.++..+|++||+++
T Consensus        82 iLVNNAGi~~~--~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav  159 (247)
T 4hp8_A           82 ILVNNAGIIRR--ADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGV  159 (247)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHH
Confidence            99999998765  6889999999999999999999999999999997664 79999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      .+|+|++|.||+++|||||+|+||+|.||+.......+...+.+....  |.+|+.+|+|+|.+++||+|+.++|+||+.
T Consensus       160 ~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~--PlgR~g~peeiA~~v~fLaSd~a~~iTG~~  237 (247)
T 4hp8_A          160 AGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERI--PAGRWGHSEDIAGAAVFLSSAAADYVHGAI  237 (247)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTC--TTSSCBCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCC--CCCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999999999999866544444444444432  349999999999999999999999999999


Q ss_pred             EeeCCCccc
Q 044670          239 LVVDGGFSV  247 (302)
Q Consensus       239 ~~~~gG~~~  247 (302)
                      |.+|||+..
T Consensus       238 i~VDGG~~A  246 (247)
T 4hp8_A          238 LNVDGGWLA  246 (247)
T ss_dssp             EEESTTGGG
T ss_pred             EEECccccc
Confidence            999999763

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.1e-53  Score=366.22  Aligned_cols=245  Identities=27%  Similarity=0.359  Sum_probs=211.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH--HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA--CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+...  ...+.++.++.+|++|+++++++++++.++||++
T Consensus         5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999999999999887644332  2346788999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||+...   ...+.+.++|++++++|+.++|+++++++|+|+++ +|+||++||.++..+.++..+|++||+|+
T Consensus        85 DiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav  160 (258)
T 4gkb_A           85 DGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQ  160 (258)
T ss_dssp             CEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHH
Confidence            999999998653   44578899999999999999999999999999754 59999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC----HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN----PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      ..|+|+++.|++++|||||+|+||+|.||+.......    +...+.+... .|+.+|+.+|+|+|++++||+|+.++++
T Consensus       161 ~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~plg~R~g~peeiA~~v~fLaS~~a~~i  239 (258)
T 4gkb_A          161 LALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK-VPLGRRFTTPDEIADTAVFLLSPRASHT  239 (258)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTT-CTTTTSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhc-CCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            9999999999999999999999999999998754321    1223333333 3443689999999999999999999999


Q ss_pred             cccEEeeCCCcccCCC
Q 044670          235 TGLNLVVDGGFSVANP  250 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~~  250 (302)
                      |||.|.+|||++...+
T Consensus       240 TG~~i~VDGG~T~l~~  255 (258)
T 4gkb_A          240 TGEWLFVDGGYTHLDR  255 (258)
T ss_dssp             CSCEEEESTTTTTSCT
T ss_pred             cCCeEEECCCcchhhh
Confidence            9999999999875443

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=9.7e-52  Score=352.86  Aligned_cols=232  Identities=27%  Similarity=0.366  Sum_probs=207.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|+||||||++|||++++++|+++|++|++++|+++..+++.++. .++.++.+|++|+++++++++++.+++|++|+||
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV   80 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER-PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV   80 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC-TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            589999999999999999999999999999999988877766553 5788999999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV  162 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (302)
                      ||||....  .++.+.+.++|++++++|+.|+|++++++.|+|.++ .|+||++||.++..+.++..+|++||+|+..|+
T Consensus        81 NNAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~lt  157 (247)
T 3ged_A           81 NNACRGSK--GILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVALT  157 (247)
T ss_dssp             ECCCCCCC--CGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             ECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHHH
Confidence            99998765  689999999999999999999999999999999875 599999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeC
Q 044670          163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVD  242 (302)
Q Consensus       163 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~  242 (302)
                      |++|.|+++ |||||+|+||+|.|++....      .+.....  .|.+|+.+|+|+|++++||+|+  +++|||.|.+|
T Consensus       158 k~lA~ela~-~IrVN~I~PG~i~t~~~~~~------~~~~~~~--~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VD  226 (247)
T 3ged_A          158 HALAMSLGP-DVLVNCIAPGWINVTEQQEF------TQEDCAA--IPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVD  226 (247)
T ss_dssp             HHHHHHHTT-TSEEEEEEECSBCCCC---C------CHHHHHT--STTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEES
T ss_pred             HHHHHHHCC-CCEEEEEecCcCCCCCcHHH------HHHHHhc--CCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEEC
Confidence            999999998 99999999999999986543      2222333  2348999999999999999974  69999999999


Q ss_pred             CCcccCC
Q 044670          243 GGFSVAN  249 (302)
Q Consensus       243 gG~~~~~  249 (302)
                      ||++...
T Consensus       227 GG~s~r~  233 (247)
T 3ged_A          227 GGMSKRM  233 (247)
T ss_dssp             TTGGGCC
T ss_pred             cCHHHhC
Confidence            9988643

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=9.6e-52  Score=356.85  Aligned_cols=239  Identities=24%  Similarity=0.324  Sum_probs=207.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++...      . .+..++++|++|+++++++++++.+++|++|+
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   81 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------L-PEELFVEADLTTKEGCAIVAEATRQRLGGVDV   81 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------S-CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------C-CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5899999999999999999999999999999999976531      1 23346899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-CChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-~~~~Y~~sK~a~~  159 (302)
                      ||||||+......++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.+ +...|++||+|++
T Consensus        82 lVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~  161 (261)
T 4h15_A           82 IVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALS  161 (261)
T ss_dssp             EEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHH
T ss_pred             EEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHH
Confidence            999999865434578899999999999999999999999999999988899999999999988876 5789999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--------CCCHHHHHHHHHhc--cccCCCCCCHHHHHHHHHHhccC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--------SINPAILEAFLSEM--GNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .|+|+++.|++++|||||+|+||+|.||+....        ....+..++.....  ..|.+|+.+|+|+|++++||+|+
T Consensus       162 ~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~fLaS~  241 (261)
T 4h15_A          162 TYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIAFLASD  241 (261)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999976432        11222222222221  23459999999999999999999


Q ss_pred             CCCCccccEEeeCCCcc
Q 044670          230 EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~  246 (302)
                      .++++|||.|.+|||..
T Consensus       242 ~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          242 RAASITGAEYTIDGGTV  258 (261)
T ss_dssp             GGTTCCSCEEEESTTCS
T ss_pred             hhcCccCcEEEECCcCc
Confidence            99999999999999964

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=4.8e-51  Score=352.86  Aligned_cols=243  Identities=24%  Similarity=0.262  Sum_probs=216.0

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++..+++.+.+    +.++.++++|++|+++++++++++.++
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6899999999875  9999999999999999999999988777766554    347899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           75 YGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +|++|+||||||+....  ..++.+.+.++|...+++|+.+++.+++.+.+++.  +.|+||++||.++..+.+++..|+
T Consensus        84 ~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~~~~~~~~~~~~Y~  161 (256)
T 4fs3_A           84 VGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYLGGEFAVQNYNVMG  161 (256)
T ss_dssp             HCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECGGGTSCCTTTHHHH
T ss_pred             hCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEeccccccCcccchhhH
Confidence            99999999999986421  23566788999999999999999999999998774  469999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|++.|+|+++.||+++|||||+|+||+|.|++.......++..+.+.... | .+|+.+|+|+|++++||+|+.++
T Consensus       162 asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~-P-l~R~g~peevA~~v~fL~Sd~a~  239 (256)
T 4fs3_A          162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERA-P-LKRNVDQVEVGKTAAYLLSDLSS  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS-T-TSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcC-C-CCCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999999877654455555555443 3 48999999999999999999999


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      ++|||+|.+|||++.
T Consensus       240 ~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          240 GVTGENIHVDSGFHA  254 (256)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CccCCEEEECcCHHh
Confidence            999999999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=1.3e-49  Score=342.50  Aligned_cols=241  Identities=30%  Similarity=0.454  Sum_probs=219.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+++..+++.+.++....++.+|++|+++++++++++.+++|++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999999999888888777777889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++||++++.
T Consensus        87 lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  164 (248)
T 3op4_A           87 LVNNAGITRD--NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIG  164 (248)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence            9999998765  57788899999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++....  .++.........  +.+++.+|+|+|++++||+++.+.+++|+++.
T Consensus       165 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~--p~~r~~~p~dva~~v~~L~s~~~~~itG~~i~  240 (248)
T 3op4_A          165 FTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQV--PAGRLGDPREIASAVAFLASPEAAYITGETLH  240 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTC--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            99999999999999999999999999987654  344433333332  33889999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       241 vdgG~~~  247 (248)
T 3op4_A          241 VNGGMYM  247 (248)
T ss_dssp             ESTTSSC
T ss_pred             ECCCeec
Confidence            9999763

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=3.7e-49  Score=341.50  Aligned_cols=247  Identities=24%  Similarity=0.308  Sum_probs=220.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +||++|||||++|||++++++|+++|++|+++ +|+.+..++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999997 88887777665554   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.+++..|++||++
T Consensus        83 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (258)
T 3oid_A           83 LDVFVNNAASGVL--RPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAA  160 (258)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHH
Confidence            9999999997654  57888999999999999999999999999999998888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++.......++....+....  +.+++.+|+|+|++++||+++.+++++|+
T Consensus       161 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~dva~~v~~L~s~~~~~itG~  238 (258)
T 3oid_A          161 LEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNT--PAGRMVEIKDMVDTVEFLVSSKADMIRGQ  238 (258)
T ss_dssp             HHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHC--TTSSCBCHHHHHHHHHHHTSSTTTTCCSC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCcccCCccCC
Confidence            9999999999999999999999999999999876543334444444332  33889999999999999999999999999


Q ss_pred             EEeeCCCcccCCCCc
Q 044670          238 NLVVDGGFSVANPSL  252 (302)
Q Consensus       238 ~~~~~gG~~~~~~~~  252 (302)
                      .|.+|||+....+..
T Consensus       239 ~i~vdGG~~~~~~~~  253 (258)
T 3oid_A          239 TIIVDGGRSLLVLEH  253 (258)
T ss_dssp             EEEESTTGGGBCC--
T ss_pred             EEEECCCccCCCCCC
Confidence            999999998776654

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.7e-49  Score=342.18  Aligned_cols=245  Identities=24%  Similarity=0.247  Sum_probs=215.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G-EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++    + .++.++.+|++|+++++++++++.+++
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999988777665554    2 248999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus        86 g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  163 (265)
T 3lf2_A           86 GCASILVNNAGQGRV--STFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAAR  163 (265)
T ss_dssp             CSCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHH
Confidence            999999999998754  578889999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-------CHHHHHHHHHh-ccccCCCCCCHHHHHHHHHHhc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-------NPAILEAFLSE-MGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ++++.|++.++.|++++||+||+|+||+|.|++......       ........... ...+.+++.+|+|+|++++||+
T Consensus       164 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  243 (265)
T 3lf2_A          164 AGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFLA  243 (265)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999997643221       12222222222 1234488999999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++.++++||++|.+|||+..
T Consensus       244 s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          244 SPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             SGGGTTCCSEEEEESSSCCC
T ss_pred             CchhcCcCCCEEEECCCCcC
Confidence            99999999999999999865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.8e-49  Score=342.96  Aligned_cols=250  Identities=37%  Similarity=0.492  Sum_probs=218.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47999999999999999999999999999999999998888777766   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||..+. .+.++...|++||+
T Consensus        86 iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKa  164 (280)
T 3tox_A           86 LDTAFNNAGALGA-MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKA  164 (280)
T ss_dssp             CCEEEECCCCCCS-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHH
Confidence            9999999997642 257788899999999999999999999999999988888999999999887 67888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +++.|++.++.|++++||+||+|+||+|.|++.....  ..++.. ....... +.+++.+|+|+|++++||+++.++++
T Consensus       165 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~-~~~~~~~-p~~r~~~pedvA~~v~~L~s~~a~~i  242 (280)
T 3tox_A          165 GLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETR-GFVEGLH-ALKRIARPEEIAEAALYLASDGASFV  242 (280)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHH-HHHHTTS-TTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHH-HHHhccC-ccCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999876522  122332 2333323 34889999999999999999999999


Q ss_pred             cccEEeeCCCcccCCCCcc
Q 044670          235 TGLNLVVDGGFSVANPSLM  253 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~~~~~  253 (302)
                      ||++|.+|||+.+......
T Consensus       243 tG~~i~vdGG~~~~~~a~~  261 (280)
T 3tox_A          243 TGAALLADGGASVTKAAEN  261 (280)
T ss_dssp             CSCEEEESTTGGGCC----
T ss_pred             cCcEEEECCCccccccccc
Confidence            9999999999998766543

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.1e-49  Score=339.86  Aligned_cols=241  Identities=29%  Similarity=0.384  Sum_probs=217.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         4 l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            4 LAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            58999999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++ .++||++||..+..+.+++..|++||++++
T Consensus        84 lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~  161 (247)
T 3rwb_A           84 LVNNASIVPF--VAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVI  161 (247)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHH
Confidence            9999998764  5788899999999999999999999999999998765 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .|++.++.|++++||+||+|+||+|.|++.....  ......+.....+ .+++.+|+|+|++++||+++.+.+++|+++
T Consensus       162 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~-~~r~~~pedva~~v~~L~s~~~~~itG~~i  238 (247)
T 3rwb_A          162 GFTRALATELGKYNITANAVTPGLIESDGVKASP--HNEAFGFVEMLQA-MKGKGQPEHIADVVSFLASDDARWITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSG--GGGGHHHHHHHSS-SCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCcCccccccC--hhHHHHHHhcccc-cCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            9999999999999999999999999999876532  2222223333223 378999999999999999999999999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||+.
T Consensus       239 ~vdGG~~  245 (247)
T 3rwb_A          239 NVDAGMV  245 (247)
T ss_dssp             EESTTSS
T ss_pred             EECCCcc
Confidence            9999975

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9e-49  Score=339.85  Aligned_cols=242  Identities=26%  Similarity=0.420  Sum_probs=217.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++   + .++.++.+|++|+++++++++++.++++
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            57999999999999999999999999999999999988877766655   2 5789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++. .+.+++..|++||
T Consensus        88 ~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  165 (262)
T 3pk0_A           88 GIDVVCANAGVFPD--APLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK  165 (262)
T ss_dssp             CCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHH
Confidence            99999999998764  57888999999999999999999999999999988778999999999886 7788999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||+||+|+||+|+|++....  .++....+....  +.+++.+|+|+|++++||+++++.+++
T Consensus       166 ~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~--p~~r~~~p~dva~~v~~L~s~~~~~it  241 (262)
T 3pk0_A          166 AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSI--PAGALGTPEDIGHLAAFLATKEAGYIT  241 (262)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTS--TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCccccCCc
Confidence            9999999999999999999999999999999987643  344444444332  338899999999999999999999999


Q ss_pred             ccEEeeCCCcccC
Q 044670          236 GLNLVVDGGFSVA  248 (302)
Q Consensus       236 G~~~~~~gG~~~~  248 (302)
                      |++|.+|||+.+.
T Consensus       242 G~~i~vdGG~~~~  254 (262)
T 3pk0_A          242 GQAIAVDGGQVLP  254 (262)
T ss_dssp             SCEEEESTTTTCC
T ss_pred             CCEEEECCCeecC
Confidence            9999999998764

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.1e-48  Score=338.21  Aligned_cols=241  Identities=31%  Similarity=0.440  Sum_probs=215.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988777665554   578899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++ +.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||++
T Consensus        90 id~lv~nAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (256)
T 3gaf_A           90 ITVLVNNAGGGGP--KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAA  166 (256)
T ss_dssp             CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHH
Confidence            9999999998764  455 7899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||+||+|+||+|.|++..... .++....+... . +.+++.+|+|+|++++||+++...+++|+
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~-~-p~~r~~~~~dva~~~~~L~s~~~~~itG~  243 (256)
T 3gaf_A          167 VNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKH-T-PLGRLGEAQDIANAALFLCSPAAAWISGQ  243 (256)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHcCCcccCccCC
Confidence            999999999999999999999999999999875432 23333333332 2 34889999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      +|.+|||...
T Consensus       244 ~i~vdgG~~~  253 (256)
T 3gaf_A          244 VLTVSGGGVQ  253 (256)
T ss_dssp             EEEESTTSCC
T ss_pred             EEEECCCccc
Confidence            9999999764

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.8e-48  Score=338.39  Aligned_cols=243  Identities=30%  Similarity=0.397  Sum_probs=217.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+.++.++.++.+|++|+++++++++++.++++++|+
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B            9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||.......++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||++++.
T Consensus        89 lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  168 (271)
T 3tzq_B           89 VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIET  168 (271)
T ss_dssp             EEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHH
T ss_pred             EEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHH
Confidence            99999987432346778899999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |++.++.|++++||+||+|+||+|+|++..... .+.....+...  .+.+++.+|+|+|++++||+++...++||++|.
T Consensus       169 l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~--~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~  245 (271)
T 3tzq_B          169 LTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATH--HLAGRIGEPHEIAELVCFLASDRAAFITGQVIA  245 (271)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTT--STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCcccCCcCCCEEE
Confidence            999999999999999999999999999876432 33333333332  234889999999999999999999999999999


Q ss_pred             eCCCcc
Q 044670          241 VDGGFS  246 (302)
Q Consensus       241 ~~gG~~  246 (302)
                      +|||..
T Consensus       246 vdGG~~  251 (271)
T 3tzq_B          246 ADSGLL  251 (271)
T ss_dssp             ESTTTT
T ss_pred             ECCCcc
Confidence            999943

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.6e-49  Score=341.45  Aligned_cols=243  Identities=31%  Similarity=0.455  Sum_probs=217.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..++    .+.++.++.+|++|+++++++++++.++++
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999999998877665544    357899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++ .++||++||.++..+.++...|++||
T Consensus        98 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (266)
T 4egf_A           98 GLDVLVNNAGISHP--QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSK  175 (266)
T ss_dssp             SCSEEEEECCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHH
Confidence            99999999998764  5788899999999999999999999999999997765 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|++.++.|++++||+||+|+||+|.|++.......+.....+....  +.+++.+|+|+|++++||+++.+.++|
T Consensus       176 ~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~dva~~v~~L~s~~~~~it  253 (266)
T 4egf_A          176 AGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARI--PLGRFAVPHEVSDAVVWLASDAASMIN  253 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTC--TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCchhcCcc
Confidence            999999999999999999999999999999998765443344444443332  348899999999999999999999999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |++|.+|||+.+
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 4egf_A          254 GVDIPVDGGYTM  265 (266)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccC
Confidence            999999999864

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=7.4e-49  Score=341.02  Aligned_cols=241  Identities=31%  Similarity=0.458  Sum_probs=208.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+.++.++.++.+|++|+++++++++++.++++++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus       105 lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (266)
T 3grp_A          105 LVNNAGITRD--GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIG  182 (266)
T ss_dssp             EEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHH
Confidence            9999998764  57778889999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++....  .++..+.+...  .+.+++.+|+|+|++++||+++.++++||++|.
T Consensus       183 ~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~--~p~~r~~~~edvA~~v~~L~s~~~~~itG~~i~  258 (266)
T 3grp_A          183 FSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAM--IPMKRMGIGEEIAFATVYLASDEAAYLTGQTLH  258 (266)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTT--CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCccccCccCCEEE
Confidence            99999999999999999999999999987654  34443333332  234889999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       259 vdGG~~~  265 (266)
T 3grp_A          259 INGGMAM  265 (266)
T ss_dssp             ESTTC--
T ss_pred             ECCCeee
Confidence            9999763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-48  Score=337.31  Aligned_cols=245  Identities=27%  Similarity=0.393  Sum_probs=214.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         4 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            4 MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999998888777665   357899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhh-ccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM-IPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.++++++++++|+| .+++.++||++||..+..+.++...|++||+
T Consensus        84 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (257)
T 3imf_A           84 IDILINNAAGNFI--CPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKA  161 (257)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHH
Confidence            9999999998654  578889999999999999999999999999998 4445799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHC-CCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          157 GIIALVKILAAELR-QYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       157 a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +++.|++.++.|++ ++||+||+|+||+|.|++...... .+...+.+...  .+.+++.+|+|+|++++||+++.+.++
T Consensus       162 a~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~p~~r~~~pedvA~~v~~L~s~~~~~i  239 (257)
T 3imf_A          162 GVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQS--VPLGRLGTPEEIAGLAYYLCSDEAAYI  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTT--STTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999997 779999999999999997654321 12222222222  234889999999999999999999999


Q ss_pred             cccEEeeCCCcccCC
Q 044670          235 TGLNLVVDGGFSVAN  249 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~  249 (302)
                      +|+++.+|||+.+..
T Consensus       240 tG~~i~vdGG~~~~~  254 (257)
T 3imf_A          240 NGTCMTMDGGQHLHQ  254 (257)
T ss_dssp             CSCEEEESTTTTSCC
T ss_pred             cCCEEEECCCcccCC
Confidence            999999999987643

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-48  Score=341.73  Aligned_cols=246  Identities=36%  Similarity=0.509  Sum_probs=218.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++++.
T Consensus       105 lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  182 (277)
T 4dqx_A          105 LVNNAGFGTT--GNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISS  182 (277)
T ss_dssp             EEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHH
Confidence            9999998764  57888999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      |++.++.|++++||+||+|+||+|.|++.....   ............. .+.+++.+|+|+|++++||+++...+++|+
T Consensus       183 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~pedvA~~v~~L~s~~~~~itG~  261 (277)
T 4dqx_A          183 LTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR-AVMDRMGTAEEIAEAMLFLASDRSRFATGS  261 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT-STTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc-CcccCCcCHHHHHHHHHHHhCCccCCCcCC
Confidence            999999999999999999999999999843211   1111111112222 234889999999999999999999999999


Q ss_pred             EEeeCCCcccCC
Q 044670          238 NLVVDGGFSVAN  249 (302)
Q Consensus       238 ~~~~~gG~~~~~  249 (302)
                      +|.+|||..+..
T Consensus       262 ~i~vdGG~~~~~  273 (277)
T 4dqx_A          262 ILTVDGGSSIGN  273 (277)
T ss_dssp             EEEESSSSSSCC
T ss_pred             EEEECCchhhhh
Confidence            999999987654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5.7e-49  Score=342.66  Aligned_cols=243  Identities=29%  Similarity=0.403  Sum_probs=217.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            57999999999999999999999999999999999988877766554   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++
T Consensus       104 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa  181 (271)
T 4ibo_A          104 VDILVNNAGIQFR--KPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGG  181 (271)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHH
Confidence            9999999998764  57888999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++.......++....+....  +.+++.+|+|+|++++||+++.+.+++|+
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          182 IKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKART--PAKRWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHS--TTCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence            9999999999999999999999999999998754322233333333332  33889999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      +|.+|||+..
T Consensus       260 ~i~vdGG~~~  269 (271)
T 4ibo_A          260 IIYVDGGMLS  269 (271)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECCCeec
Confidence            9999999764

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.3e-48  Score=336.76  Aligned_cols=243  Identities=28%  Similarity=0.382  Sum_probs=216.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47899999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++..+.++...|++||++++
T Consensus        86 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  163 (259)
T 4e6p_A           86 LVNNAALFDL--APIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVI  163 (259)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            9999998764  5788899999999999999999999999999997655 689999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++.++.|++++||+||+|+||+|+||+.....         ..++....+...  .+.+++.+|+|+|++++||+++.
T Consensus       164 ~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~~~dva~~v~~L~s~~  241 (259)
T 4e6p_A          164 SLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEA--VPFGRMGTAEDLTGMAIFLASAE  241 (259)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHH--STTSSCBCTHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhcc--CCCCCCcCHHHHHHHHHHHhCCc
Confidence            9999999999999999999999999999764320         012222222222  23488999999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      +.+++|++|++|||..+
T Consensus       242 ~~~itG~~i~vdgG~~~  258 (259)
T 4e6p_A          242 SDYIVSQTYNVDGGNWM  258 (259)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             cCCCCCCEEEECcChhc
Confidence            99999999999999764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.4e-48  Score=335.80  Aligned_cols=243  Identities=30%  Similarity=0.424  Sum_probs=217.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            47899999999999999999999999999999999999888888887778999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+  .|+||++||.++..+.++...|++||++++.
T Consensus        86 lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  161 (255)
T 4eso_A           86 LHINAGVSEL--EPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVS  161 (255)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHH
Confidence            9999998764  57888999999999999999999999999999865  5899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +++.++.|++++||+||+|+||+|.|++.......+.....+   .... .+.+++.+|+|+|++++||+++ ++++||+
T Consensus       162 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~s~-~~~itG~  239 (255)
T 4eso_A          162 FASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNI-TPMKRNGTADEVARAVLFLAFE-ATFTTGA  239 (255)
T ss_dssp             HHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHH-STTSSCBCHHHHHHHHHHHHHT-CTTCCSC
T ss_pred             HHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhcc-CCCCCCcCHHHHHHHHHHHcCc-CcCccCC
Confidence            999999999999999999999999999876543333322222   2222 2348899999999999999998 8899999


Q ss_pred             EEeeCCCcccCC
Q 044670          238 NLVVDGGFSVAN  249 (302)
Q Consensus       238 ~~~~~gG~~~~~  249 (302)
                      .|.+|||+....
T Consensus       240 ~i~vdGG~~~~l  251 (255)
T 4eso_A          240 KLAVDGGLGQKL  251 (255)
T ss_dssp             EEEESTTTTTTB
T ss_pred             EEEECCCccccC
Confidence            999999987653

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=8.1e-49  Score=342.84  Aligned_cols=246  Identities=28%  Similarity=0.315  Sum_probs=216.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.++++
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999987766655443    57899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus       105 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  182 (277)
T 4fc7_A          105 RIDILINCAAGNFL--CPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKA  182 (277)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHH
T ss_pred             CCCEEEECCcCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHH
Confidence            99999999997654  5788899999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++.|++.++.|++++||+||+|+||+|.|++.... .............  .+.+++.+|+|+|++++||+++.++++|
T Consensus       183 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~p~~r~~~p~dvA~~v~fL~s~~~~~it  260 (277)
T 4fc7_A          183 AVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTA--SPLQRLGNKTEIAHSVLYLASPLASYVT  260 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHT--STTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhcc--CCCCCCcCHHHHHHHHHHHcCCccCCcC
Confidence            999999999999999999999999999999864322 1123333333333  2348899999999999999999999999


Q ss_pred             ccEEeeCCCcccCCC
Q 044670          236 GLNLVVDGGFSVANP  250 (302)
Q Consensus       236 G~~~~~~gG~~~~~~  250 (302)
                      |++|.+|||..+..+
T Consensus       261 G~~i~vdGG~~~~~~  275 (277)
T 4fc7_A          261 GAVLVADGGAWLTFP  275 (277)
T ss_dssp             SCEEEESTTHHHHCC
T ss_pred             CCEEEECCCcccCCC
Confidence            999999999876544

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4.8e-48  Score=332.26  Aligned_cols=240  Identities=29%  Similarity=0.453  Sum_probs=213.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +.+|++|||||++|||++++++|+++|++|++++|+. +..+++.+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999988754 5555444433   56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  159 (246)
T 3osu_A           82 SLDVLVNNAGITRD--NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHH
Confidence            99999999998764  5778899999999999999999999999999998878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||+||+|+||++.|++....  .+...+.+....  +.+++.+|+|+|++++||++++..+++|
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~--p~~r~~~~~dva~~v~~l~s~~~~~itG  235 (246)
T 3osu_A          160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQI--PLARFGQDTDIANTVAFLASDKAKYITG  235 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTC--TTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            999999999999999999999999999999987654  344444444332  3488999999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      ++|++|||+.
T Consensus       236 ~~i~vdgG~~  245 (246)
T 3osu_A          236 QTIHVNGGMY  245 (246)
T ss_dssp             CEEEESTTSC
T ss_pred             CEEEeCCCcc
Confidence            9999999975

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=1.2e-47  Score=336.86  Aligned_cols=245  Identities=28%  Similarity=0.387  Sum_probs=210.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC----------------ccHHHHHHHHh---CCCeEEEEecCCCH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----------------DNLGQALACKL---GEDVCYIHCDVTSE   61 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----------------~~~~~~~~~~~---~~~~~~~~~Dl~~~   61 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+                .+..++..+.+   +.++.++.+|++|+
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            579999999999999999999999999999999887                34444444433   56789999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcc
Q 044670           62 DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASAC  140 (302)
Q Consensus        62 ~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~  140 (302)
                      ++++++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||.+
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~  167 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG  167 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchh
Confidence            999999999999999999999999986542 2477889999999999999999999999999997755 68999999999


Q ss_pred             cccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-----------CCCHHHHHHHHHhc-cc
Q 044670          141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-----------SINPAILEAFLSEM-GN  208 (302)
Q Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~-~~  208 (302)
                      +..+.++...|++||++++.|++.++.|++++||+||+|+||+|.|++....           .............. ..
T Consensus       168 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T 3uve_A          168 GLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTL  247 (286)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCSS
T ss_pred             hccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhcc
Confidence            9999999999999999999999999999999999999999999999987531           01122222221111 12


Q ss_pred             cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      + +++.+|+|+|++++||+++.++++||++|.+|||+.+
T Consensus       248 p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l  285 (286)
T 3uve_A          248 P-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL  285 (286)
T ss_dssp             S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             C-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence            3 7899999999999999999999999999999999865

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-48  Score=341.04  Aligned_cols=246  Identities=29%  Similarity=0.374  Sum_probs=213.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999998888777665   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc--CCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI--AGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK  155 (302)
                      +|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..  +.++...|++||
T Consensus       106 iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asK  184 (283)
T 3v8b_A          106 LDIVVANAGINGV-WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATK  184 (283)
T ss_dssp             CCEEEECCCCCCC-BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHH
Confidence            9999999998642 2578889999999999999999999999999999887889999999999877  778899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH-----HHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE-----AFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++++.+++.++.|++++||+||+|+||+|.|++............     ......+.+.+++.+|+|+|++++||+++.
T Consensus       185 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~  264 (283)
T 3v8b_A          185 AAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER  264 (283)
T ss_dssp             HHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999998865432222110     000111111278899999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      +.++||++|.+|||+.+
T Consensus       265 a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          265 ARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             GTTCCSCEEEESTTHHH
T ss_pred             ccCCcCCEEEECcCccc
Confidence            99999999999999764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.3e-48  Score=340.59  Aligned_cols=243  Identities=26%  Similarity=0.383  Sum_probs=218.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++.    .++.++.+|++|+++++++++++.++++
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            579999999999999999999999999999999999988887776663    5789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||..+. .+.++...|++||
T Consensus       119 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK  196 (293)
T 3rih_A          119 ALDVVCANAGIFPE--ARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASK  196 (293)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHH
Confidence            99999999998764  57888999999999999999999999999999988788999999999886 7888999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|++.++.|++++||+||+|+||+|+|++....  .++....+...  .+.+++.+|+|+|++++||+++.+.+++
T Consensus       197 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~--~p~~r~~~p~dvA~~v~fL~s~~a~~it  272 (293)
T 3rih_A          197 AAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARS--IPMGMLGSPVDIGHLAAFLATDEAGYIT  272 (293)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTT--STTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999999987543  23444443333  2348899999999999999999999999


Q ss_pred             ccEEeeCCCcccCC
Q 044670          236 GLNLVVDGGFSVAN  249 (302)
Q Consensus       236 G~~~~~~gG~~~~~  249 (302)
                      |++|.+|||+.+..
T Consensus       273 G~~i~vdGG~~~~~  286 (293)
T 3rih_A          273 GQAIVVDGGQVLPE  286 (293)
T ss_dssp             SCEEEESTTTTCBS
T ss_pred             CCEEEECCCccCCC
Confidence            99999999988643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=2.9e-48  Score=337.98  Aligned_cols=241  Identities=26%  Similarity=0.394  Sum_probs=215.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus        26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988777665544   567889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++
T Consensus       106 iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  183 (270)
T 3ftp_A          106 LNVLVNNAGITQD--QLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAG  183 (270)
T ss_dssp             CCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHH
Confidence            9999999998764  57788899999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++....  .++....+...  .+.+++.+|+|+|++++||+++...+++|+
T Consensus       184 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~--~p~~r~~~pedvA~~v~~L~s~~~~~itG~  259 (270)
T 3ftp_A          184 VAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQ--IPLGRLGSPEDIAHAVAFLASPQAGYITGT  259 (270)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTT--CTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhCCCcCCccCc
Confidence            99999999999999999999999999999987543  23333333222  234889999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      +|.+|||+.+
T Consensus       260 ~i~vdGG~~~  269 (270)
T 3ftp_A          260 TLHVNGGMFM  269 (270)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCccc
Confidence            9999999764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-47  Score=335.16  Aligned_cols=246  Identities=29%  Similarity=0.417  Sum_probs=211.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc------------cHHHHHHH---HhCCCeEEEEecCCCHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD------------NLGQALAC---KLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------------~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++            +..++..+   ..+.++.++.+|++|+++++
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            5799999999999999999999999999999999972            33333332   33578899999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG  145 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~  145 (302)
                      ++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  165 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSAN  165 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCC
Confidence            9999999999999999999998764  57888999999999999999999999999999988778999999999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----------CCHHHHHHHHHhccccCCCCC
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----------INPAILEAFLSEMGNLRGQVL  214 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  214 (302)
                      ++...|++||++++.|++.++.|++++||+||+|+||+|+||+.....           .................+++.
T Consensus       166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (281)
T 3s55_A          166 FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPFL  245 (281)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSCB
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCCC
Confidence            999999999999999999999999999999999999999999875310           011111111111122227899


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +|+|+|++++||+++.+.++||++|.+|||....
T Consensus       246 ~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          246 KPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             CHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            9999999999999999999999999999998753

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-48  Score=340.13  Aligned_cols=246  Identities=37%  Similarity=0.534  Sum_probs=216.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+.++.++.++.+|++|+++++++++++.++++++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999999888888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++++.
T Consensus       107 lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~  184 (277)
T 3gvc_A          107 LVANAGVVHL--ASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQ  184 (277)
T ss_dssp             EEECCCCCCC--BCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence            9999998764  57888999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CH-HHHHHHHH-hccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NP-AILEAFLS-EMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +++.++.|++++||+||+|+||+|+|++...... .+ ........ ....+.+++.+|+|+|++++||+++.+++++|+
T Consensus       185 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~  264 (277)
T 3gvc_A          185 LSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASMITGT  264 (277)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999999999999999997543211 01 11110011 001123789999999999999999999999999


Q ss_pred             EEeeCCCcccC
Q 044670          238 NLVVDGGFSVA  248 (302)
Q Consensus       238 ~~~~~gG~~~~  248 (302)
                      +|.+|||....
T Consensus       265 ~i~vdGG~~~~  275 (277)
T 3gvc_A          265 TQIADGGTIAA  275 (277)
T ss_dssp             EEEESTTGGGS
T ss_pred             EEEECCcchhc
Confidence            99999998653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=6.1e-48  Score=337.96  Aligned_cols=245  Identities=27%  Similarity=0.321  Sum_probs=218.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CC---CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GE---DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.   ++.++.+|++|+++++++++++.++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            57999999999999999999999999999999999988877766655   22   7889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      +|++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++...|++|
T Consensus        89 ~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  167 (281)
T 3svt_A           89 HGRLHGVVHCAGGSEN-IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVT  167 (281)
T ss_dssp             HSCCCEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHH
T ss_pred             cCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHH
Confidence            9999999999997432 257788999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.|++++||+||+|+||+|+|++.......++....+....  +.+++.+|+|+|++++||+++...++
T Consensus       168 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~dva~~~~~l~s~~~~~i  245 (281)
T 3svt_A          168 KSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCT--PLPRQGEVEDVANMAMFLLSDAASFV  245 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHC--SSSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhCcccCCC
Confidence            9999999999999999999999999999999998765433444444444332  33889999999999999999988999


Q ss_pred             cccEEeeCCCcccC
Q 044670          235 TGLNLVVDGGFSVA  248 (302)
Q Consensus       235 ~G~~~~~~gG~~~~  248 (302)
                      +|+.|.+|||..+.
T Consensus       246 tG~~~~vdgG~~~~  259 (281)
T 3svt_A          246 TGQVINVDGGQMLR  259 (281)
T ss_dssp             CSCEEEESTTGGGS
T ss_pred             CCCEEEeCCChhcc
Confidence            99999999998876

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9.7e-48  Score=333.73  Aligned_cols=243  Identities=24%  Similarity=0.327  Sum_probs=213.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988877766554   568899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.++|++++++|+.++++++++++|.|.+++ |+||++||..+..+.+++..|++||++
T Consensus        89 id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa  166 (264)
T 3ucx_A           89 VDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSA  166 (264)
T ss_dssp             CSEEEECCCSCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHH
T ss_pred             CcEEEECCCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHH
Confidence            9999999998532 25788899999999999999999999999999997654 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------IN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ++.|++.++.|++++||+||+|+||+|+|++.....        .. ++..+.+. .. .+.+++.+|+|+|++++||++
T Consensus       167 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~p~~r~~~p~dvA~~v~~L~s  244 (264)
T 3ucx_A          167 LLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAA-AG-SDLKRLPTEDEVASAILFMAS  244 (264)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHH-TT-SSSSSCCBHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHh-cc-CCcccCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999864321        01 12222222 22 234889999999999999999


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.++++||++|.+|||.++
T Consensus       245 ~~~~~itG~~i~vdGG~~~  263 (264)
T 3ucx_A          245 DLASGITGQALDVNCGEYK  263 (264)
T ss_dssp             GGGTTCCSCEEEESTTSSC
T ss_pred             ccccCCCCCEEEECCCccC
Confidence            9999999999999999764

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=4e-48  Score=338.75  Aligned_cols=243  Identities=30%  Similarity=0.342  Sum_probs=212.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+   +.++.++.+|++|+++++++++++.+++|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999988877766655   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHH--hhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR--VMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.|+++++++++|  .|.+++.|+||++||.++..+.++...|++||
T Consensus       102 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (279)
T 3sju_A          102 IGILVNSAGRNGG--GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASK  179 (279)
T ss_dssp             CCEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHH
Confidence            9999999998764  5778899999999999999999999999999  57766789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.|++.++.|++++||+||+|+||+|.|++.....         ..++....+. ... +.+++.+|+|+|++++||
T Consensus       180 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-p~~r~~~pedvA~~v~~L  257 (279)
T 3sju_A          180 HGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN-AKI-PLGRYSTPEEVAGLVGYL  257 (279)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH-TTC-TTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH-hcC-CCCCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999764311         1122333332 222 348899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++.+.+++|++|.+|||+..
T Consensus       258 ~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          258 VTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             TSSGGGGCCSCEEEESTTCCC
T ss_pred             hCccccCcCCcEEEECCCccC
Confidence            999999999999999999764

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=7e-47  Score=334.04  Aligned_cols=245  Identities=28%  Similarity=0.377  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC------------ccHHHHHHHH---hCCCeEEEEecCCCHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ------------DNLGQALACK---LGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~   65 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+            .+.+++..++   .+.++.++.+|++|+++++
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            579999999999999999999999999999999987            3444444333   3578999999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA  144 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~  144 (302)
                      ++++++.+++|++|+||||||+.... .++.+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++..+
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~  184 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRG  184 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccC
Confidence            99999999999999999999987642 2478889999999999999999999999999987654 789999999999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----------CCHHHHHHHH-HhccccCCC
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----------INPAILEAFL-SEMGNLRGQ  212 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~  212 (302)
                      .++...|++||++++.|++.++.|++++||+||+|+||+|.|++.....           .......... .....+ ++
T Consensus       185 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~r  263 (299)
T 3t7c_A          185 AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLP-IP  263 (299)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSSS-CS
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcccC-cC
Confidence            9999999999999999999999999999999999999999999875310           0111111111 111223 67


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.+|+|+|++++||+++.+.++||++|.+|||+.+
T Consensus       264 ~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l  298 (299)
T 3t7c_A          264 YVEPADISNAILFLVSDDARYITGVSLPVDGGALL  298 (299)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence            89999999999999999999999999999999865

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.6e-47  Score=335.21  Aligned_cols=244  Identities=28%  Similarity=0.428  Sum_probs=206.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++| +.+..+.+.+++    +.++.++.+|++|+++++++++++.+++
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            57899999999999999999999999999999999 445555555444    4678999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      |++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||
T Consensus       103 g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  180 (281)
T 3v2h_A          103 GGADILVNNAGVQFV--EKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAK  180 (281)
T ss_dssp             SSCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHH
Confidence            999999999998764  577888999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH---------HHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP---------AILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.+++.++.|++++||+||+|+||+|.|++........         +.....+... .+.+++.+|+|+|++++||
T Consensus       181 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~~edvA~~v~~L  259 (281)
T 3v2h_A          181 HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKG-QPTKKFITVEQVASLALYL  259 (281)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------C-CTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhc-CCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999876432111         1111112222 2348899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++.+.+++|++|.+|||+.+
T Consensus       260 ~s~~a~~itG~~i~vdGG~~~  280 (281)
T 3v2h_A          260 AGDDAAQITGTHVSMDGGWTA  280 (281)
T ss_dssp             HSSGGGGCCSCEEEESTTGGG
T ss_pred             cCCCcCCCCCcEEEECCCccC
Confidence            999999999999999999764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-47  Score=332.89  Aligned_cols=241  Identities=27%  Similarity=0.398  Sum_probs=210.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++. .++..+++   +.++.++.+|++|+++++++. +..+++++
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~~~~~g~  106 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVA-EELAATRR  106 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HHHHHHSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HHHHhcCC
Confidence            57999999999999999999999999999999997643 33333333   467899999999999999994 44566789


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.++..+.++...|++||++
T Consensus       107 iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  184 (273)
T 3uf0_A          107 VDVLVNNAGIIAR--APAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHA  184 (273)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHH
T ss_pred             CcEEEECCCCCCC--CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHH
Confidence            9999999998764  57888899999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++.......++....+....  +.+++.+|+|+|++++||+++.+.+++|+
T Consensus       185 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~r~~~pedva~~v~~L~s~~a~~itG~  262 (273)
T 3uf0_A          185 VVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARI--PAGRWATPEDMVGPAVFLASDAASYVHGQ  262 (273)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHS--TTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhCchhcCCcCC
Confidence            9999999999999999999999999999998765433444444444443  33889999999999999999989999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      +|.+|||+.+
T Consensus       263 ~i~vdGG~~~  272 (273)
T 3uf0_A          263 VLAVDGGWLA  272 (273)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEECcCccC
Confidence            9999999764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-47  Score=330.74  Aligned_cols=243  Identities=28%  Similarity=0.366  Sum_probs=196.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999998888777777778899999999999999999999999999999


Q ss_pred             EEEcccCCCCCC--CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEcCcccccCCCCChhHH
Q 044670           81 MYNNAGIVDRGF--ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        81 lv~~Ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      ||||||......  .+..+.+.++|++++++|+.|+++++++++|+|.++      +.++||++||.++..+.++...|+
T Consensus        85 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  164 (257)
T 3tpc_A           85 LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYA  164 (257)
T ss_dssp             EEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHH
T ss_pred             EEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchH
Confidence            999999875421  112257789999999999999999999999999874      578999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||++++.|++.++.|++++||+||+|+||+|.|++.....  +...+.+. ...+..+++.+|+|+|++++||+++  .
T Consensus       165 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~-~~~p~~~r~~~~~dva~~v~~l~s~--~  239 (257)
T 3tpc_A          165 ASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALA-ASVPFPPRLGRAEEYAALVKHICEN--T  239 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-----------------CCSSSSCSCBCHHHHHHHHHHHHHC--T
T ss_pred             HHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHH-hcCCCCCCCCCHHHHHHHHHHHccc--C
Confidence            99999999999999999999999999999999999876432  22222222 2222227899999999999999975  6


Q ss_pred             CccccEEeeCCCcccC
Q 044670          233 DVTGLNLVVDGGFSVA  248 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~  248 (302)
                      +++|+++.+|||+.+.
T Consensus       240 ~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          240 MLNGEVIRLDGALRMA  255 (257)
T ss_dssp             TCCSCEEEESTTCCC-
T ss_pred             CcCCcEEEECCCccCC
Confidence            8999999999998764

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=3e-47  Score=331.51  Aligned_cols=238  Identities=31%  Similarity=0.500  Sum_probs=210.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++| +.+..+++.+.+   +.++.++.+|++|+++++++++++.++++
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999988 444455444433   56889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||+
T Consensus       106 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  183 (269)
T 4dmm_A          106 RLDVLVNNAGITRD--TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKA  183 (269)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHH
Confidence            99999999998764  5778889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC-CCCCcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD-EASDVT  235 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~  235 (302)
                      +++.|++.++.|++++||+||+|+||+|.|++....      ........ .+.+++.+|+|+|++++||+++ ...+++
T Consensus       184 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~------~~~~~~~~-~p~~r~~~~~dvA~~v~~l~s~~~~~~it  256 (269)
T 4dmm_A          184 GVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL------AAEKLLEV-IPLGRYGEAAEVAGVVRFLAADPAAAYIT  256 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH------HHHHHGGG-CTTSSCBCHHHHHHHHHHHHHCGGGGGCC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc------cHHHHHhc-CCCCCCCCHHHHHHHHHHHhCCcccCCCc
Confidence            999999999999999999999999999999986432      11222222 2348899999999999999997 778999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |++|.+|||+.+
T Consensus       257 G~~i~vdGG~~~  268 (269)
T 4dmm_A          257 GQVINIDGGLVM  268 (269)
T ss_dssp             SCEEEESTTSCC
T ss_pred             CCEEEECCCeec
Confidence            999999999764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.4e-47  Score=335.54  Aligned_cols=245  Identities=25%  Similarity=0.328  Sum_probs=193.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||++|||++++++|+++|++|++++| +.+..++..+++   +.++.++.+|++|+++++++++++.++++
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999986 555555554443   56889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCCChhHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      ++|+||||||+......++.+.+.++|++++++|+.|+++++++++|.|.+++   .++||++||.++..+.++...|++
T Consensus       107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  186 (280)
T 4da9_A          107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCM  186 (280)
T ss_dssp             CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHH
T ss_pred             CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHH
Confidence            99999999998432235788889999999999999999999999999997654   689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+||+|+||+|.|++.....  +.......... .+.+++.+|+|+|++++||+++.+.+
T Consensus       187 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~-~p~~r~~~pedvA~~v~~L~s~~~~~  263 (280)
T 4da9_A          187 SKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS--GKYDGLIESGL-VPMRRWGEPEDIGNIVAGLAGGQFGF  263 (280)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHTSTTGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc--hhHHHHHhhcC-CCcCCcCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999876542  12211222212 23488999999999999999999999


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|++|.+|||+.+.
T Consensus       264 itG~~i~vdGG~~~~  278 (280)
T 4da9_A          264 ATGSVIQADGGLSIG  278 (280)
T ss_dssp             GTTCEEEESTTCC--
T ss_pred             CCCCEEEECCCcccC
Confidence            999999999998753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=4.3e-47  Score=331.64  Aligned_cols=240  Identities=34%  Similarity=0.500  Sum_probs=211.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988877666554   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCC--CCChhHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAG--IGSPAYTVS  154 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~--~~~~~Y~~s  154 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++..+.  ++...|++|
T Consensus       110 iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~as  187 (276)
T 3r1i_A          110 IDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTS  187 (276)
T ss_dssp             CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHH
Confidence            9999999998764  5778889999999999999999999999999998765 4899999999887654  367899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.|++++||+||+|+||+|.|++....   +.....+...  .+.+++.+|+|+|++++||+++.+.++
T Consensus       188 Kaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~--~p~~r~~~pedvA~~v~fL~s~~~~~i  262 (276)
T 3r1i_A          188 KAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPK--IPLGRMGRPEELTGLYLYLASAASSYM  262 (276)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGG--STTSSCBCGGGSHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999987653   2222222222  234889999999999999999999999


Q ss_pred             cccEEeeCCCccc
Q 044670          235 TGLNLVVDGGFSV  247 (302)
Q Consensus       235 ~G~~~~~~gG~~~  247 (302)
                      ||++|.+|||+..
T Consensus       263 tG~~i~vdGG~~~  275 (276)
T 3r1i_A          263 TGSDIVIDGGYTC  275 (276)
T ss_dssp             CSCEEEESTTTTC
T ss_pred             cCcEEEECcCccC
Confidence            9999999999753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=9e-47  Score=324.32  Aligned_cols=241  Identities=26%  Similarity=0.358  Sum_probs=216.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+++.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988777665554   568899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++||++
T Consensus        83 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (247)
T 3lyl_A           83 IDILVNNAGITRD--NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG  160 (247)
T ss_dssp             CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence            9999999998764  57778899999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||+||+|+||+|.|++....  .++....+... . +.+++.+|+|+|+++++++++...+++|+
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~dva~~i~~l~s~~~~~~tG~  236 (247)
T 3lyl_A          161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATK-I-PSGQIGEPKDIAAAVAFLASEEAKYITGQ  236 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTT-S-TTCCCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhc-C-CCCCCcCHHHHHHHHHHHhCCCcCCccCC
Confidence            99999999999999999999999999999987654  33333333222 2 33889999999999999999989999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      ++.+|||+.+
T Consensus       237 ~i~vdgG~~~  246 (247)
T 3lyl_A          237 TLHVNGGMYM  246 (247)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCEec
Confidence            9999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=7.8e-48  Score=336.16  Aligned_cols=241  Identities=24%  Similarity=0.305  Sum_probs=213.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++..+++.+++   +.++.++.+|++|+++++++++++.+. ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-g~  109 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI-AP  109 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh-CC
Confidence            57999999999999999999999999999999999988776665554   578899999999999999999999887 89


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.++..+.++...|++||++
T Consensus       110 iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  187 (275)
T 4imr_A          110 VDILVINASAQIN--ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAA  187 (275)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHH
Confidence            9999999998764  57888999999999999999999999999999988778999999999999988888899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++...... .++....+..... +.+++.+|+|+|++++||+++.++++||
T Consensus       188 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~pedvA~~v~fL~s~~a~~itG  266 (275)
T 4imr_A          188 QHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLN-WMGRAGRPEEMVGAALFLASEACSFMTG  266 (275)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHS-TTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcC-ccCCCcCHHHHHHHHHHHcCcccCCCCC
Confidence            9999999999999999999999999999997653211 2333344444332 3488999999999999999999999999


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      ++|.+|||+
T Consensus       267 ~~i~vdGG~  275 (275)
T 4imr_A          267 ETIFLTGGY  275 (275)
T ss_dssp             CEEEESSCC
T ss_pred             CEEEeCCCC
Confidence            999999995

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=9.9e-47  Score=328.42  Aligned_cols=240  Identities=31%  Similarity=0.439  Sum_probs=207.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++++. +..+++.++   .+.++.++.+|++|+++++++++++.++++
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999987654 444444433   357889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc-cccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC-TEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~-~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+  .|+||++||.. ...+.++...|++||
T Consensus        96 ~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asK  171 (270)
T 3is3_A           96 HLDIAVSNSGVVSF--GHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSK  171 (270)
T ss_dssp             CCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHH
Confidence            99999999998754  57888999999999999999999999999999965  68999999988 566788899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC---------CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN---------SINPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.|++.++.|++++||+||+|+||+|.|++....         ....+.......... +.+++.+|+|+|++++||
T Consensus       172 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~p~dvA~~v~~L  250 (270)
T 3is3_A          172 GAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS-PLHRNGWPQDVANVVGFL  250 (270)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS-TTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC-CCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999986521         112233333333333 348899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCc
Q 044670          227 ATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++.+.++||++|.+|||+
T Consensus       251 ~s~~~~~itG~~i~vdGG~  269 (270)
T 3is3_A          251 VSKEGEWVNGKVLTLDGGA  269 (270)
T ss_dssp             TSGGGTTCCSCEEEESTTC
T ss_pred             cCCccCCccCcEEEeCCCC
Confidence            9999999999999999996

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=7.3e-47  Score=327.49  Aligned_cols=246  Identities=31%  Similarity=0.428  Sum_probs=205.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+++..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999999999999999999999999998888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC----CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH----KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ||||||+... ..++.+.+.++|++++++|+.++++++++++|+|.+++    .++||++||.++..+.+++..|++||+
T Consensus        87 li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa  165 (261)
T 3n74_A           87 LVNNAGIGHK-PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG  165 (261)
T ss_dssp             EEECCCCCCC-SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred             EEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence            9999998652 14667788999999999999999999999999997653    678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +++.|++.++.|++++||+||+|+||++.|++......  .++..+.+...  .+.+++.+|+|+|++++||+++...++
T Consensus       166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~~~~i  243 (261)
T 3n74_A          166 WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDS--IPMGRLLKPDDLAEAAAFLCSPQASMI  243 (261)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------CTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhc--CCcCCCcCHHHHHHHHHHHcCCcccCc
Confidence            99999999999999999999999999999998765421  12222222222  233789999999999999999989999


Q ss_pred             cccEEeeCCCcccCC
Q 044670          235 TGLNLVVDGGFSVAN  249 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~  249 (302)
                      +|++|.+|||+.+..
T Consensus       244 tG~~i~vdgG~~~~~  258 (261)
T 3n74_A          244 TGVALDVDGGRSIGG  258 (261)
T ss_dssp             CSCEEEESTTTTC--
T ss_pred             CCcEEEecCCcccCC
Confidence            999999999988754

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-46  Score=328.63  Aligned_cols=239  Identities=28%  Similarity=0.452  Sum_probs=208.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-------------CccHHHHHHHHh---CCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-------------QDNLGQALACKL---GEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||++|||||++|||++++++|+++|++|++++|             +.+..+++.+.+   +.++.++.+|++|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            57999999999999999999999999999999998             445555544433   56789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCccccc
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEI  143 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~  143 (302)
                      +++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++ .++||++||.++..
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  170 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK  170 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc
Confidence            99999999999999999999998764  5788899999999999999999999999999998765 78999999999999


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH-------h---c-cccCCC
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS-------E---M-GNLRGQ  212 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-------~---~-~~~~~~  212 (302)
                      +.++...|++||++++.|++.++.|++++||+||+|+||+|+|++....     .......       .   . ..+ .+
T Consensus       171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~r  244 (280)
T 3pgx_A          171 ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE-----AMMEIFARHPSFVHSFPPMPVQP-NG  244 (280)
T ss_dssp             CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH-----HHHHHHHHCGGGGGGSCCBTTBC-SS
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh-----hhhhhhhcCchhhhhhhhcccCC-CC
Confidence            9999999999999999999999999999999999999999999987531     1111111       0   0 112 35


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.+|+|+|++++||+++.+++++|++|.+|||...
T Consensus       245 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          245 FMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            88999999999999999999999999999999763

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-46  Score=326.71  Aligned_cols=243  Identities=26%  Similarity=0.350  Sum_probs=208.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-G   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+.+ +
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999987776655443   5678999999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        99 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  176 (273)
T 1ae1_A           99 KLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  176 (273)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHH
Confidence            99999999998654  5778889999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +++.+++.++.|++++||+||+|+||+++|++......    .......+....  +.+++.+|+|+|++++||+++...
T Consensus       177 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~dvA~~v~~l~s~~~~  254 (273)
T 1ae1_A          177 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT--PMGRAGKPQEVSALIAFLCFPAAS  254 (273)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS--TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999998654321    123333333332  337899999999999999998889


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+++.+|||+.+
T Consensus       255 ~~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          255 YITGQIIWADGGFTA  269 (273)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CcCCCEEEECCCccc
Confidence            999999999999764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-46  Score=327.01  Aligned_cols=243  Identities=31%  Similarity=0.478  Sum_probs=212.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+    +.++.++.+|++|+++++++++++.++++
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999987776655444    66788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc-cccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC-TEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~-~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.+ +..+.++...|++||
T Consensus        99 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  176 (267)
T 1vl8_A           99 KLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  176 (267)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHH
Confidence            99999999998654  577788999999999999999999999999999887789999999998 888888899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||+||+|+||++.|++.......++....+... . +.+++.+|+|+|++++||+++...+++
T Consensus       177 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~~~~~p~dvA~~v~~l~s~~~~~it  254 (267)
T 1vl8_A          177 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR-I-PLGRTGVPEDLKGVAVFLASEEAKYVT  254 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHT-C-TTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhh-C-CCCCCcCHHHHHHHHHHHcCccccCCc
Confidence            99999999999999999999999999999999865321122333333322 2 337899999999999999998888999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+++.+|||+.+
T Consensus       255 G~~i~vdGG~~~  266 (267)
T 1vl8_A          255 GQIIFVDGGWTA  266 (267)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCeEEECCCCCC
Confidence            999999999753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.2e-47  Score=333.76  Aligned_cols=242  Identities=30%  Similarity=0.378  Sum_probs=207.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-------------CccHHHHHHHH---hCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-------------QDNLGQALACK---LGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-------------~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||++|||||++|||++++++|+++|++|++++|             +.+..++..+.   .+.++.++.+|++|++++
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            57999999999999999999999999999999998             34444444333   356789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCccccc
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEI  143 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~  143 (302)
                      +++++++.++++++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++ .|+||++||.++..
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  166 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK  166 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence            99999999999999999999998765  5778899999999999999999999999999998765 68999999999999


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---------HHhccccCCCCC
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---------LSEMGNLRGQVL  214 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~  214 (302)
                      +.++...|++||++++.|++.++.|++++||+||+|+||+|.|++...... .......         .... .+ .++.
T Consensus       167 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~p-~r~~  243 (277)
T 3tsc_A          167 MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMV-TAVGQAMETNPQLSHVLTPF-LP-DWVA  243 (277)
T ss_dssp             CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHH-HHHHHHHHTCGGGTTTTCCS-SS-CSCB
T ss_pred             CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhh-hhhhhcccccHHHHHHhhhc-cC-CCCC
Confidence            999999999999999999999999999999999999999999998653100 0000000         0011 12 3688


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|+|++++||+++.+.++||+.|.+|||+..
T Consensus       244 ~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          244 EPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            999999999999999999999999999999764

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.8e-46  Score=334.03  Aligned_cols=246  Identities=27%  Similarity=0.412  Sum_probs=209.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC------------ccHHHHHHH---HhCCCeEEEEecCCCHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ------------DNLGQALAC---KLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+            .+..++..+   ..+.++.++.+|++|+++++
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            578999999999999999999999999999999876            333333333   23578899999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA  144 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~  144 (302)
                      ++++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++..+
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~  201 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRG  201 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCC
Confidence            9999999999999999999998765  5778899999999999999999999999999997764 689999999999999


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-----------CCCHHHHHHHHHhccccCCCC
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-----------SINPAILEAFLSEMGNLRGQV  213 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~  213 (302)
                      .++...|++||++++.|++.++.|++++||+||+|+||+|+|++....           ....+.............+++
T Consensus       202 ~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  281 (317)
T 3oec_A          202 APGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLPIPW  281 (317)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSS
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCCCCC
Confidence            999999999999999999999999999999999999999999975421           011112222222222222678


Q ss_pred             CCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          214 LNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       214 ~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .+|+|+|++++||+++.++++||++|.+|||+.+.
T Consensus       282 ~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          282 VEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            89999999999999999999999999999998653

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.1e-47  Score=328.35  Aligned_cols=238  Identities=28%  Similarity=0.397  Sum_probs=200.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||++|||++++++|+++|++|++++ |+.+..+++.+.   .+.++.++.+|++|+++++++++++.++++
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999999999999985 455555554443   356789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+  .|+||++||..+..+.++...|++||+
T Consensus       105 ~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (267)
T 3u5t_A          105 GVDVLVNNAGIMPL--TTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKA  180 (267)
T ss_dssp             CEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHH
Confidence            99999999998764  57888899999999999999999999999999964  589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.|++.++.|++++||+||+|+||+|.|++..... .++..+.+. ... +.+++.+|+|+|++++||+++.+.+++|
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~-~~~-p~~r~~~pedvA~~v~~L~s~~~~~itG  257 (267)
T 3u5t_A          181 GVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFA-KLA-PLERLGTPQDIAGAVAFLAGPDGAWVNG  257 (267)
T ss_dssp             HHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHH-TSS-TTCSCBCHHHHHHHHHHHHSTTTTTCCS
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHH-hcC-CCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999999999999999999999875432 222222222 222 3488999999999999999999999999


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      ++|.+|||+
T Consensus       258 ~~i~vdGG~  266 (267)
T 3u5t_A          258 QVLRANGGI  266 (267)
T ss_dssp             EEEEESSSC
T ss_pred             CEEEeCCCc
Confidence            999999996

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-46  Score=320.19  Aligned_cols=238  Identities=33%  Similarity=0.479  Sum_probs=211.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+++.+.++  +.++.+|++|+++++++++++.++++++|+
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   80 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRLDG   80 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999999999999999887777766553  788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.+ ..+.++...|++||++++.
T Consensus        81 lvn~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~  157 (245)
T 1uls_A           81 VVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVG  157 (245)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHH
Confidence            9999998654  467788999999999999999999999999999887789999999998 7888889999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||++.|++....  .+.....+....  +.+++.+|+|+|+++++++++...+++|+.+.
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~--p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~  233 (245)
T 1uls_A          158 LTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAAT--PLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (245)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTC--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhC--CCCCCcCHHHHHHHHHHHhCchhcCCcCCEEE
Confidence            99999999999999999999999999987543  233333333322  23779999999999999999888899999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       234 vdgG~~~  240 (245)
T 1uls_A          234 VDGGRTI  240 (245)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999765

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.5e-46  Score=325.48  Aligned_cols=243  Identities=31%  Similarity=0.462  Sum_probs=206.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+. .+++.+.+    +.++.++.+|++|+++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999999998876 66555443    5678899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus        82 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  159 (260)
T 1x1t_A           82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHH
Confidence            999999999998654  467788999999999999999999999999999877789999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---------HHHHHHH-HHhccccCCCCCCHHHHHHHHHH
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---------PAILEAF-LSEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      ++++.+++.++.|++++||+||+|+||+|.|++.......         ++....+ ... . +.+++.+|+|+|++++|
T Consensus       160 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEK-Q-PSLQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHH-C-TTCCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhcc-C-CCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999986543110         1111222 222 2 33789999999999999


Q ss_pred             hccCCCCCccccEEeeCCCccc
Q 044670          226 LATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |+++...+++|+++.+|||+.+
T Consensus       238 l~s~~~~~~tG~~~~vdgG~~~  259 (260)
T 1x1t_A          238 LASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhChhhcCCCCCEEEECCCccC
Confidence            9998888999999999999753

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-46  Score=322.44  Aligned_cols=240  Identities=31%  Similarity=0.481  Sum_probs=211.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++| +.+..+++.+++   +.++.++.+|++|+++++++++++.++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999 666666554443   56788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        82 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  159 (246)
T 2uvd_A           82 QVDILVNNAGVTKD--NLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKA  159 (246)
T ss_dssp             CCCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHH
Confidence            99999999998654  4677889999999999999999999999999998777899999999999888899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||+||+|+||++.|++.....  +.....+... . +.+++.+|+|+|+++++++++...+++|
T Consensus       160 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~-~-p~~~~~~~~dvA~~~~~l~s~~~~~~tG  235 (246)
T 2uvd_A          160 GVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKL-I-PAAQFGEAQDIANAVTFFASDQSKYITG  235 (246)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHT-C-TTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCchhcCCCC
Confidence            9999999999999999999999999999999876432  2222333222 2 3378999999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +++.+|||+.
T Consensus       236 ~~~~vdgG~~  245 (246)
T 2uvd_A          236 QTLNVDGGMV  245 (246)
T ss_dssp             CEEEESTTSC
T ss_pred             CEEEECcCcc
Confidence            9999999964

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.3e-46  Score=323.93  Aligned_cols=240  Identities=29%  Similarity=0.405  Sum_probs=203.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+. +..++..+..+.++.++.+|++|+++++++++++.++++++|
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999999999999999999999999999999998 666554445566789999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++
T Consensus        85 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  162 (249)
T 2ew8_A           85 ILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANI  162 (249)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHH
Confidence            99999998654  4677889999999999999999999999999998777899999999999999899999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCccc-CCCCC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISS-RNSIN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      .+++.++.|++++||+||+|+||++.|++.. ..... ++.    ......+.+++.+|+|+|++++||++++..+++|+
T Consensus       163 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~dva~~~~~l~s~~~~~~tG~  238 (249)
T 2ew8_A          163 GFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDV----LPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQ  238 (249)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCC----------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhH----HHHhhCccCCCCCHHHHHHHHHHHcCcccCCCCCc
Confidence            9999999999999999999999999999865 22100 011    11111234789999999999999999888899999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||+.
T Consensus       239 ~~~vdGG~~  247 (249)
T 2ew8_A          239 TLAVDGGMV  247 (249)
T ss_dssp             EEEESSSCC
T ss_pred             EEEECCCcc
Confidence            999999965

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.5e-46  Score=324.38  Aligned_cols=237  Identities=32%  Similarity=0.427  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++++. +..+++.+++   +.++.++.+|++|+++++++++++.+++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999999999999997654 4444444433   57889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-CCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-GIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||..+... .++...|++||
T Consensus       109 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asK  184 (271)
T 3v2g_A          109 GLDILVNSAGIWHS--APLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASK  184 (271)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHH
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHH
Confidence            99999999998764  57888999999999999999999999999999954  689999999776654 68899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|++.++.|++++||+||+|+||+|.|++.....   ...+.....  .+.+++.+|+|+|++++||+++.+.++|
T Consensus       185 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~--~~~~r~~~pedvA~~v~fL~s~~~~~it  259 (271)
T 3v2g_A          185 AALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHAEAQRER--IATGSYGEPQDIAGLVAWLAGPQGKFVT  259 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHT--CTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhHHHHHhc--CCCCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            99999999999999999999999999999999876532   222223332  2338899999999999999999999999


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |++|.+|||+.
T Consensus       260 G~~i~vdGG~~  270 (271)
T 3v2g_A          260 GASLTIDGGAN  270 (271)
T ss_dssp             SCEEEESTTTT
T ss_pred             CCEEEeCcCcc
Confidence            99999999974

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.9e-46  Score=326.44  Aligned_cols=246  Identities=30%  Similarity=0.433  Sum_probs=210.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+..+.++.++.+|++|+++++++++++.++++++|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999999999999999999999999888888877788999999999999999999999999999999


Q ss_pred             EEEcccCCCCCC---CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           81 MYNNAGIVDRGF---ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        81 lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      ||||||+.....   ....+.+.++|++++++|+.++++++++++|+|.++ .++||++||..+..+.++...|++||++
T Consensus        83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa  161 (281)
T 3zv4_A           83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKHA  161 (281)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHHHHHH
T ss_pred             EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHHHHHH
Confidence            999999864210   112244567899999999999999999999999765 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-------HHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc-C
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-------PAILEAFLSEMGNLRGQVLNAEGIANAALYLAT-D  229 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~  229 (302)
                      ++.+++.++.|++++ |+||+|+||+|.|++.......       ............ +.+++.+|+|+|++++||++ +
T Consensus       162 ~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~pedvA~~v~fL~s~~  239 (281)
T 3zv4_A          162 VVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL-PIGRMPALEEYTGAYVFFATRG  239 (281)
T ss_dssp             HHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTC-TTSSCCCGGGGSHHHHHHHSTT
T ss_pred             HHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcC-CCCCCCCHHHHHHHHHHhhccc
Confidence            999999999999986 9999999999999987543211       001222233333 34889999999999999999 7


Q ss_pred             CCCCccccEEeeCCCcccCC
Q 044670          230 EASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~~~  249 (302)
                      .+.++||++|.+|||+.+..
T Consensus       240 ~~~~itG~~i~vdGG~~~~~  259 (281)
T 3zv4_A          240 DSLPATGALLNYDGGMGVRG  259 (281)
T ss_dssp             TSTTCSSCEEEESSSGGGCC
T ss_pred             ccccccCcEEEECCCCcccc
Confidence            78889999999999988654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=6.3e-46  Score=326.95  Aligned_cols=245  Identities=25%  Similarity=0.293  Sum_probs=206.9

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHH---HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQA---LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+|  |||++++++|+++|++|++++|+++..+.   +.+.. .++.++.+|++|+++++++++++.+++
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            5799999999994  59999999999999999999998643332   22233 468899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +++|+||||||+....  ..++.+.+.++|++++++|+.++++++++++|+|.+  .++||++||.++..+.+++..|++
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~a  185 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGV  185 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHH
Confidence            9999999999987410  147778899999999999999999999999999964  689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|++.|++.++.|++++||+||+|+||+|.|++.......+.....+... . +.+++.+|+|+|++++||+++.+.+
T Consensus       186 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~pedvA~~v~~L~s~~~~~  263 (293)
T 3grk_A          186 AKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYN-A-PLRRTVTIDEVGDVGLYFLSDLSRS  263 (293)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHH-S-TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999999876543323333333333 2 3388999999999999999998999


Q ss_pred             ccccEEeeCCCcccCCC
Q 044670          234 VTGLNLVVDGGFSVANP  250 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~  250 (302)
                      +||++|.+|||+.+...
T Consensus       264 itG~~i~vdGG~~~~~~  280 (293)
T 3grk_A          264 VTGEVHHADSGYHVIGM  280 (293)
T ss_dssp             CCSCEEEESTTGGGBCC
T ss_pred             CcceEEEECCCcccCCC
Confidence            99999999999987643

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=4.4e-46  Score=322.57  Aligned_cols=243  Identities=26%  Similarity=0.342  Sum_probs=212.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-G   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++..+...+++   +.++.++.+|++|+++++++++++.+++ +
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988776655544   4578899999999999999999999999 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        87 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  164 (260)
T 2ae2_A           87 KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKG  164 (260)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHH
Confidence            99999999998653  4677889999999999999999999999999998777899999999999988899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH---HHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE---AFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      +++.+++.++.|++++||+||+|+||++.|++.......+....   .+...  .+.+++.+|+|+|+++++|+++...+
T Consensus       165 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dvA~~v~~l~s~~~~~  242 (260)
T 2ae2_A          165 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR--CALRRMGEPKELAAMVAFLCFPAASY  242 (260)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT--STTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999998643222222222   22222  23378999999999999999988889


Q ss_pred             ccccEEeeCCCccc
Q 044670          234 VTGLNLVVDGGFSV  247 (302)
Q Consensus       234 ~~G~~~~~~gG~~~  247 (302)
                      ++|+++.+|||..+
T Consensus       243 ~tG~~~~vdgG~~~  256 (260)
T 2ae2_A          243 VTGQIIYVDGGLMA  256 (260)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999764

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=2.8e-46  Score=324.31  Aligned_cols=244  Identities=26%  Similarity=0.373  Sum_probs=212.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++    +.++.++.+|++|+++++++++++.++++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999987776655444    56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        85 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  162 (263)
T 3ai3_A           85 GADILVNNAGTGSN--ETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKA  162 (263)
T ss_dssp             SCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHH
Confidence            99999999998754  5778889999999999999999999999999998777899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +++.+++.++.|++++||+||+|+||+|+||+......         .++....+..... +.+++.+|+|+|+++++|+
T Consensus       163 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~dvA~~~~~l~  241 (263)
T 3ai3_A          163 ALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA-PIKRFASPEELANFFVFLC  241 (263)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC-TTCSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC-CCCCCcCHHHHHHHHHHHc
Confidence            99999999999999999999999999999997542100         1122222222202 3378999999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++..+++|+++.+|||..+
T Consensus       242 s~~~~~~~G~~~~vdgG~~~  261 (263)
T 3ai3_A          242 SERATYSVGSAYFVDGGMLK  261 (263)
T ss_dssp             STTCTTCCSCEEEESTTCCC
T ss_pred             CccccCCCCcEEEECCCccc
Confidence            98888999999999999764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=2e-46  Score=324.59  Aligned_cols=244  Identities=25%  Similarity=0.342  Sum_probs=199.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|+++ .|+.+..+...+++   +.++.++.+|++|+++++++++++.+++|
T Consensus         6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            579999999999999999999999999999998 55555555544443   56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|+|.+  .++||++||.++. .+.++...|++||
T Consensus        86 ~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asK  162 (259)
T 3edm_A           86 EIHGLVHVAGGLIA-RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSK  162 (259)
T ss_dssp             SEEEEEECCCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHH
T ss_pred             CCCEEEECCCccCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHH
Confidence            99999999997632 257888999999999999999999999999999965  6899999999888 6788899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++ |+||+|+||+|.|++...... ++..+.+...  .+.+++.+|+|+|++++||+++.+.++|
T Consensus       163 aa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~--~p~~r~~~pedva~~v~~L~s~~~~~it  238 (259)
T 3edm_A          163 GAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK-PEVRERVAGA--TSLKREGSSEDVAGLVAFLASDDAAYVT  238 (259)
T ss_dssp             HHHHHHHHHHHHHHTTT-CEEEEEEECCBCC-------------------------CCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC-hHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            99999999999999986 999999999999998765421 2222222222  2338899999999999999999999999


Q ss_pred             ccEEeeCCCcccCCCC
Q 044670          236 GLNLVVDGGFSVANPS  251 (302)
Q Consensus       236 G~~~~~~gG~~~~~~~  251 (302)
                      |++|.+|||.....+.
T Consensus       239 G~~i~vdGg~~~~~~~  254 (259)
T 3edm_A          239 GACYDINGGVLFSEGH  254 (259)
T ss_dssp             SCEEEESBCSSBC---
T ss_pred             CCEEEECCCcCCCCCC
Confidence            9999999998876554

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.4e-46  Score=325.84  Aligned_cols=264  Identities=19%  Similarity=0.204  Sum_probs=223.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.+++
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN-SPYVYELDVSKEEHFKSLYNSVKKDL   82 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            578999999999  99999999999999999999999876   3333333333 47889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +++|+||||||+....  ..++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|++
T Consensus        83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  160 (275)
T 2pd4_A           83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGL  160 (275)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHH
Confidence            9999999999986420  135667899999999999999999999999999964  489999999999999899999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+||+|+||+|.|++.......+.....+....  +.+++.+|+|+|++++|++++...+
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~dva~~~~~l~s~~~~~  238 (275)
T 2pd4_A          161 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINA--PLRKNVSLEEVGNAGMYLLSSLSSG  238 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS--TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcC--CcCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999998764322233333333322  3377899999999999999988889


Q ss_pred             ccccEEeeCCCcccCCCCccccCCCccceeeccCCccc
Q 044670          234 VTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRS  271 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (302)
                      ++|+.+.+|||+....  ..+...+...++++|+.+.+
T Consensus       239 ~tG~~~~vdgg~~~~~--~~~~~~~~~~~~~lw~~s~~  274 (275)
T 2pd4_A          239 VSGEVHFVDAGYHVMG--MGAVEEKDNKATLLWDLHKE  274 (275)
T ss_dssp             CCSCEEEESTTGGGBS--SCCCTTCTTTTCCHHHHSSC
T ss_pred             CCCCEEEECCCcccCC--CChhhcCcccchhhhhhhcc
Confidence            9999999999987642  33456678889999998875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.5e-46  Score=328.39  Aligned_cols=246  Identities=24%  Similarity=0.254  Sum_probs=211.2

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHH---HHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+|  |||++++++|+++|++|++++|+++..+.+.   +.. ..+.++.+|++|+++++++++++.+++
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~  106 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEEW  106 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5799999999997  9999999999999999999999976544332   233 346889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      |++|+||||||+....  ..++.+.+.++|++.+++|+.++++++++++|.|.+  .|+||++||.++..+.+++..|++
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~a  184 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGV  184 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHH
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHH
Confidence            9999999999986420  136778899999999999999999999999999964  689999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.|+++++.|++++||+||+|+||+|.|++................. . +.+++.+|+|+|++++||+++.+.+
T Consensus       185 sKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~-p~~r~~~pedvA~~v~fL~s~~a~~  262 (296)
T 3k31_A          185 CKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYN-S-PLRRNTTLDDVGGAALYLLSDLGRG  262 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHH-S-TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHcCCccCC
Confidence            9999999999999999999999999999999999876542212222222222 2 3488999999999999999998999


Q ss_pred             ccccEEeeCCCcccCCCC
Q 044670          234 VTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~~  251 (302)
                      +||++|.+|||+.+....
T Consensus       263 itG~~i~vdGG~~~~~~~  280 (296)
T 3k31_A          263 TTGETVHVDCGYHVVGMK  280 (296)
T ss_dssp             CCSCEEEESTTGGGCSSC
T ss_pred             ccCCEEEECCCccccCCc
Confidence            999999999999876543

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-46  Score=323.36  Aligned_cols=244  Identities=27%  Similarity=0.442  Sum_probs=211.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999987776655443     5678999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||+... ..++.+.+.++|++++++|+.|++++++.++|.|.+++.++||++||.++..+.++...|++||
T Consensus        91 g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  169 (267)
T 1iy8_A           91 GRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  169 (267)
T ss_dssp             SCCSEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             CCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHH
Confidence            999999999998642 1367778999999999999999999999999999877789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--CCCHHHHH----HHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--SINPAILE----AFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++++.+++.++.|++++||+||+|+||+++|++....  ...+....    .+...  .+.+++.+|+|+|+++++|+++
T Consensus       170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~~~dvA~~v~~l~s~  247 (267)
T 1iy8_A          170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV--NPSKRYGEAPEIAAVVAFLLSD  247 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT--CTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhcc--CCCCCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999985431  00011111    22222  2347899999999999999998


Q ss_pred             CCCCccccEEeeCCCccc
Q 044670          230 EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~  247 (302)
                      +..+++|+.+.+|||+.+
T Consensus       248 ~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          248 DASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             GGTTCCSCEEEESTTTTT
T ss_pred             cccCCCCCEEEECCCccc
Confidence            888999999999999754

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=2e-46  Score=326.00  Aligned_cols=241  Identities=24%  Similarity=0.373  Sum_probs=208.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++     +..+.++.+|+++++++++++    +++
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~----~~~   83 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI----EKY   83 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH----HHC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH----Hhc
Confidence            47899999999999999999999999999999999988777665554     346788999999999976655    467


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||
T Consensus        84 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  161 (267)
T 3t4x_A           84 PKVDILINNLGIFEP--VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATK  161 (267)
T ss_dssp             CCCSEEEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHH
Confidence            899999999998764  577888999999999999999999999999999888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--------CCC-HHHHHHHHHhcc--ccCCCCCCHHHHHHHHH
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--------SIN-PAILEAFLSEMG--NLRGQVLNAEGIANAAL  224 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~-~~~~~~~~~~~~--~~~~~~~~~~dva~~~~  224 (302)
                      ++++.+++.++.|++++||+||+|+||++.|++....        ... ++..+.+.....  .+.+++.+|+|+|++++
T Consensus       162 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~  241 (267)
T 3t4x_A          162 TMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHLVT  241 (267)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHHHH
Confidence            9999999999999999999999999999999864321        111 223333333322  24588999999999999


Q ss_pred             HhccCCCCCccccEEeeCCCccc
Q 044670          225 YLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ||+++.++++||++|.+|||+..
T Consensus       242 fL~s~~~~~itG~~i~vdGG~~~  264 (267)
T 3t4x_A          242 FLSSPLSSAINGSALRIDGGLVR  264 (267)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCSC
T ss_pred             HHcCccccCccCCeEEECCCccc
Confidence            99999999999999999999764

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.6e-46  Score=326.95  Aligned_cols=240  Identities=31%  Similarity=0.450  Sum_probs=209.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+...       .....+.+|++|+++++++++++.++++++|+
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999999876431       35678899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++++.
T Consensus        85 lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  162 (269)
T 3vtz_A           85 LVNNAGIEQY--SPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLG  162 (269)
T ss_dssp             EEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHH
Confidence            9999998764  57788899999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----C-C---HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----I-N---PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~-~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      |++.++.|+++ +|+||+|+||+|.|++.....     . .   .+..+.+...  .+.+++.+|+|+|++++||+++.+
T Consensus       163 l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~pedvA~~v~~L~s~~~  239 (269)
T 3vtz_A          163 LTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQ--HPMGRIGRPEEVAEVVAFLASDRS  239 (269)
T ss_dssp             HHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHH--STTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCCcc
Confidence            99999999998 899999999999999764211     0 0   2222333222  234889999999999999999999


Q ss_pred             CCccccEEeeCCCcccCCCCc
Q 044670          232 SDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      .+++|++|.+|||+....+..
T Consensus       240 ~~itG~~i~vdGG~~~~~~~~  260 (269)
T 3vtz_A          240 SFITGACLTVDGGLLSKLPIS  260 (269)
T ss_dssp             TTCCSCEEEESTTGGGBCCCC
T ss_pred             CCCcCcEEEECCCccccCCCC
Confidence            999999999999998765543

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=6.7e-46  Score=322.37  Aligned_cols=241  Identities=31%  Similarity=0.410  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCC-ChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA-SGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+ +|||++++++|+++|++|++++|+.+..++..+++    +.++.++.+|++|+++++++++++.+++
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            579999999998 59999999999999999999999988877766655    3578999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      +++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.++ +.++||++||..+..+.++...|++|
T Consensus       100 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  177 (266)
T 3o38_A          100 GRLDVLVNNAGLGGQ--TPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAA  177 (266)
T ss_dssp             SCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCcEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHH
Confidence            999999999998764  577888999999999999999999999999999876 67899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.|++.++.|++++||+||+|+||+|.|++...... ++....+...  .+.+++.+|+|+|++++||+++...++
T Consensus       178 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~--~~~~r~~~~~dva~~i~~l~s~~~~~~  254 (266)
T 3o38_A          178 KAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASD--EAFGRAAEPWEVAATIAFLASDYSSYM  254 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------C--CTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhc--CCcCCCCCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999998765421 2222222222  234889999999999999999988999


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|++|.+|||+.
T Consensus       255 tG~~i~vdgG~~  266 (266)
T 3o38_A          255 TGEVVSVSSQRA  266 (266)
T ss_dssp             CSCEEEESSCCC
T ss_pred             cCCEEEEcCCcC
Confidence            999999999963

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.1e-46  Score=322.12  Aligned_cols=233  Identities=22%  Similarity=0.393  Sum_probs=205.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecC--CCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDV--TSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+.+    +.++.++.+|+  +|+++++++++++.++
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999988877665544    34788999999  9999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++|
T Consensus        90 ~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  168 (252)
T 3f1l_A           90 YPRLDGVLHNAGLLGD-VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAAS  168 (252)
T ss_dssp             CSCCSEEEECCCCCCC-CSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCccCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHH
Confidence            9999999999998542 257888999999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.|++++ |+||+|+||+|.|++.....          ... . ..++.+|+|+|++++||+++.+.++
T Consensus       169 K~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~----------~~~-~-~~~~~~p~dva~~~~~L~s~~~~~i  235 (252)
T 3f1l_A          169 KFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAF----------PTE-D-PQKLKTPADIMPLYLWLMGDDSRRK  235 (252)
T ss_dssp             HHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHC----------TTC-C-GGGSBCTGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhC----------Ccc-c-hhccCCHHHHHHHHHHHcCccccCC
Confidence            999999999999999987 99999999999998643211          111 1 1457899999999999999999999


Q ss_pred             cccEEeeCCCccc
Q 044670          235 TGLNLVVDGGFSV  247 (302)
Q Consensus       235 ~G~~~~~~gG~~~  247 (302)
                      ||+.|.+|||+..
T Consensus       236 tG~~i~vdgG~~~  248 (252)
T 3f1l_A          236 TGMTFDAQPGRKP  248 (252)
T ss_dssp             CSCEEESSCC---
T ss_pred             CCCEEEeCCCcCC
Confidence            9999999999764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=5.8e-46  Score=320.94  Aligned_cols=241  Identities=25%  Similarity=0.362  Sum_probs=213.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .++|++|||||++|||++++++|+++|++|++++ |+.+......+.   .+.++.++.+|++|+++++++++++.++++
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999999999987 555555444333   356789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        91 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  168 (256)
T 3ezl_A           91 EIDVLVNNAGITRD--VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKA  168 (256)
T ss_dssp             CEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHH
Confidence            99999999998764  5778889999999999999999999999999998888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||+||+|+||+|.|++....  .+.....+....  +.+++.+|+|+|++++||+++...+++|
T Consensus       169 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~tG  244 (256)
T 3ezl_A          169 GIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATI--PVRRLGSPDEIGSIVAWLASEESGFSTG  244 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHS--TTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCCcccCCcC
Confidence            999999999999999999999999999999988654  345555544443  2378999999999999999998899999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.+.+|||+.+
T Consensus       245 ~~i~vdgG~~~  255 (256)
T 3ezl_A          245 ADFSLNGGLHM  255 (256)
T ss_dssp             CEEEESTTSCC
T ss_pred             cEEEECCCEeC
Confidence            99999999764

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-46  Score=323.26  Aligned_cols=240  Identities=33%  Similarity=0.479  Sum_probs=210.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999999988777665554   457889999999999999999999999999


Q ss_pred             ccEEEEcccCC-CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||.. ..  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        85 id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  162 (262)
T 1zem_A           85 IDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  162 (262)
T ss_dssp             CCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999986 32  5777889999999999999999999999999998777899999999999998899999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC------------CC-CHH-HHHHHHHhccccCCCCCCHHHHHHH
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN------------SI-NPA-ILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      +++.+++.++.|++++||+||+|+||++.|++....            .. .++ ..+.+... . +.+++.+|+|+|++
T Consensus       163 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~r~~~p~dvA~~  240 (262)
T 1zem_A          163 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS-V-PMRRYGDINEIPGV  240 (262)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT-S-TTSSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc-C-CCCCCcCHHHHHHH
Confidence            999999999999999999999999999999986431            11 122 22222222 2 33889999999999


Q ss_pred             HHHhccCCCCCccccEEeeCCC
Q 044670          223 ALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                      ++||+++...+++|+.+.+|||
T Consensus       241 v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          241 VAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHcCchhcCcCCcEEecCCC
Confidence            9999999889999999999998

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=4.8e-46  Score=321.96  Aligned_cols=242  Identities=26%  Similarity=0.379  Sum_probs=209.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.  .++..+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47999999999999999999999999999999998877  66555544   46789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC-CEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++. ++||++||.++..+.++...|++||
T Consensus        81 ~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           81 GFDVLVNNAGIAQI--KPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHH
Confidence            99999999998654  57778899999999999999999999999999987666 8999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------C-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------I-NPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.+++.++.|++++||+||+|+||++.|++.....        . .++....+...  .+.+++.+|+|+|++++||
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~r~~~p~dvA~~v~~l  236 (258)
T 3a28_C          159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSS--IALGRPSVPEDVAGLVSFL  236 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTT--CTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhc--CCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999854310        0 01222222222  2337899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++...+++|+++.+|||+.+
T Consensus       237 ~s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          237 ASENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             HSGGGTTCCSCEEEESSSSCC
T ss_pred             hCcccCCCCCCEEEECCCEec
Confidence            998888999999999999753

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-46  Score=322.94  Aligned_cols=241  Identities=32%  Similarity=0.492  Sum_probs=209.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+++..++.++.+|++|+++++++++++.++++++|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            57899999999999999999999999999999999998888877777667899999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.++++++++++|.| ++ .++||++||.++. +.++...|++||++++.
T Consensus        84 lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~  158 (263)
T 2a4k_A           84 VAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVG  158 (263)
T ss_dssp             EEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHH
Confidence            9999998754  467788999999999999999999999999999 54 7899999999888 76778899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++....  .+.....+... . +.+++.+|+|+|+++++++++...+++|+.+.
T Consensus       159 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-~-p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  234 (263)
T 2a4k_A          159 LARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGA-S-PLGRAGRPEEVAQAALFLLSEESAYITGQALY  234 (263)
T ss_dssp             HHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHT-S-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            99999999999999999999999999987653  33333333332 2 33789999999999999999888899999999


Q ss_pred             eCCCcccCCC
Q 044670          241 VDGGFSVANP  250 (302)
Q Consensus       241 ~~gG~~~~~~  250 (302)
                      +|||..+..+
T Consensus       235 vdgG~~~~~~  244 (263)
T 2a4k_A          235 VDGGRSIVGP  244 (263)
T ss_dssp             ESTTTTTC--
T ss_pred             ECCCccccCC
Confidence            9999876533

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.5e-46  Score=331.20  Aligned_cols=242  Identities=25%  Similarity=0.295  Sum_probs=208.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc--HHHHH---HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN--LGQAL---ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--~~~~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+  ..+.+   .+..+.++.++.+|++|+++++++++++.+++
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999998743  23333   23346788999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|.+  .++||++||.++..+.++...|++||
T Consensus       127 g~iD~lv~nAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asK  203 (294)
T 3r3s_A          127 GGLDILALVAGKQTA-IPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_dssp             TCCCEEEECCCCCCC-CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHH
Confidence            999999999998642 146778899999999999999999999999999954  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|++.++.|++++||+||+|+||+|+|++.......++....+...  .+.+++.+|+|+|++++||+++.+.++|
T Consensus       204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p~~r~~~p~dvA~~v~~L~s~~~~~it  281 (294)
T 3r3s_A          204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQ--TPMKRAGQPAELAPVYVYLASQESSYVT  281 (294)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTT--STTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            99999999999999999999999999999999843322222222222222  2348899999999999999999999999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |++|.+|||+.+
T Consensus       282 G~~i~vdGG~~l  293 (294)
T 3r3s_A          282 AEVHGVCGGEHL  293 (294)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCccC
Confidence            999999999765

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=4.4e-46  Score=327.68  Aligned_cols=242  Identities=27%  Similarity=0.330  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH-HHH---HHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ-ALA---CKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+... ...   +..+.++.++.+|++|+++++++++++.++++
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999876432 222   23356889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||..... .++.+.+.++|++++++|+.|+++++++++|+|.+  .++||++||..+..+.++...|++||+
T Consensus       125 ~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKa  201 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKG  201 (291)
T ss_dssp             SCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHH
Confidence            999999999986431 46778899999999999999999999999999953  579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.|++.++.|++++||+||+|+||+|+|++..... .++....+...  .+.+++.+|+|+|++++||+++...+++|
T Consensus       202 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~--~p~~r~~~p~dvA~~v~~L~s~~~~~itG  278 (291)
T 3ijr_A          202 AIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSN--VPMQRPGQPYELAPAYVYLASSDSSYVTG  278 (291)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTT--STTSSCBCGGGTHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHcc--CCCCCCcCHHHHHHHHHHHhCCccCCCcC
Confidence            9999999999999999999999999999999864332 22222222222  23488999999999999999999999999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      ++|.+|||+.+.
T Consensus       279 ~~i~vdGG~~~~  290 (291)
T 3ijr_A          279 QMIHVNGGVIVN  290 (291)
T ss_dssp             CEEEESSSCCCC
T ss_pred             CEEEECCCcccC
Confidence            999999998754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.4e-45  Score=324.47  Aligned_cols=240  Identities=23%  Similarity=0.291  Sum_probs=210.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHh----CCCeEEEEecCCCHH-------------
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKL----GEDVCYIHCDVTSED-------------   62 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~-------------   62 (302)
                      |++|++|||||++|||++++++|+++|++|++++ |+.+..+.+.+.+    +.++.++.+|++|++             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            5789999999999999999999999999999999 9887776655443    467899999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCC--------------HHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           63 ----EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP--------------KSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        63 ----~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                          +++++++++.++++++|+||||||+...  .++.+.+              .++|++++++|+.++++++++++|.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  164 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  164 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                9999999999999999999999998754  4667777              8999999999999999999999999


Q ss_pred             hccCC------CCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH
Q 044670          125 MIPQH------KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI  198 (302)
Q Consensus       125 l~~~~------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~  198 (302)
                      |.+++      .++||++||..+..+.++...|++||++++.|++.++.|++++||+||+|+||+|.|++ . .  .+..
T Consensus       165 m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--~~~~  240 (291)
T 1e7w_A          165 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--PPAV  240 (291)
T ss_dssp             HHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--CHHH
T ss_pred             HHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--CHHH
Confidence            98776      69999999999999999999999999999999999999999999999999999999998 4 2  2443


Q ss_pred             HHHHHHhccccCC-CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          199 LEAFLSEMGNLRG-QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       199 ~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      ...+... . +.+ ++.+|+|+|++++||+++...+++|+++.+|||+.+.
T Consensus       241 ~~~~~~~-~-p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          241 WEGHRSK-V-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             HHHHHTT-C-TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhh-C-CCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence            3333322 2 335 7999999999999999988899999999999998754

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.3e-45  Score=319.59  Aligned_cols=244  Identities=29%  Similarity=0.374  Sum_probs=211.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..++..+++   +.++.++.+|++|+++++++++++.+++++
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999987766655443   457889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||++
T Consensus        92 iD~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  170 (260)
T 2zat_A           92 VDILVSNAAVNPF-FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTA  170 (260)
T ss_dssp             CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence            9999999997532 146777899999999999999999999999999987778999999999999998999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||+||+|+||++.|++.......+.....+... . +.+++.+|+|+|+++++|+++...+++|+
T Consensus       171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~v~~l~s~~~~~~tG~  248 (260)
T 2zat_A          171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES-L-RIRRLGNPEDCAGIVSFLCSEDASYITGE  248 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH-H-TCSSCBCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHcCcccCCccCC
Confidence            999999999999999999999999999999864321122222222222 2 23789999999999999999888899999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      ++.+|||...
T Consensus       249 ~~~vdgG~~~  258 (260)
T 2zat_A          249 TVVVGGGTAS  258 (260)
T ss_dssp             EEEESTTCCC
T ss_pred             EEEECCCccc
Confidence            9999999764

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6e-46  Score=323.30  Aligned_cols=242  Identities=27%  Similarity=0.407  Sum_probs=208.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||++|||++++++|+++|++|+++++ +.+..+......   +.++.++.+|++|+++++++++++.++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999984 444444433332   46789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++||+
T Consensus       103 ~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  180 (269)
T 3gk3_A          103 KVDVLINNAGITRD--ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKA  180 (269)
T ss_dssp             CCSEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHH
T ss_pred             CCCEEEECCCcCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHH
Confidence            99999999998765  5778889999999999999999999999999998777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.|++.++.|++++||+||+|+||+|.|++.....  +.......... .+.+++.+|+|+|++++||+++...+++|
T Consensus       181 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~-~~~~~~~~p~dvA~~v~~L~s~~~~~itG  257 (269)
T 3gk3_A          181 GIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP--QDVLEAKILPQ-IPVGRLGRPDEVAALIAFLCSDDAGFVTG  257 (269)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---------CCSGGG-CTTSSCBCHHHHHHHHHHHTSTTCTTCCS
T ss_pred             HHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc--hhHHHHHhhhc-CCcCCccCHHHHHHHHHHHhCCCcCCeeC
Confidence            9999999999999999999999999999999876542  11111111111 23378899999999999999998899999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +.|++|||+.+
T Consensus       258 ~~i~vdgG~~~  268 (269)
T 3gk3_A          258 ADLAINGGMHM  268 (269)
T ss_dssp             CEEEESTTSCC
T ss_pred             cEEEECCCEeC
Confidence            99999999765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.1e-46  Score=326.78  Aligned_cols=242  Identities=24%  Similarity=0.352  Sum_probs=200.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc---cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD---NLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|..   +..+++.+++   +.++.++.+|++|+++++++++++.++
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999987753   3444444443   567899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.  +.++||++||.++..+.++...|++|
T Consensus        89 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~~~~~~~~~~~Y~as  164 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLK--KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSLLAAYTGFYSTYAGN  164 (262)
T ss_dssp             HCSEEEEEECCCCCCS--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCHHHHHHCCCCC----
T ss_pred             cCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechhhccCCCCCchhHHH
Confidence            9999999999998765  5778889999999999999999999999999994  36899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+|++.|++.++.|++++||+||+|+||+|.|++...... ++... ..... .+.+++.+|+|+|++++||+++ ..++
T Consensus       165 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~-~~~~~-~~~~r~~~pedvA~~v~~L~s~-~~~i  240 (262)
T 3ksu_A          165 KAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQET-KESTA-FHKSQ-AMGNQLTKIEDIAPIIKFLTTD-GWWI  240 (262)
T ss_dssp             -CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------CCCCSCCGGGTHHHHHHHHTT-TTTC
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCc-hHHHH-HHHhc-CcccCCCCHHHHHHHHHHHcCC-CCCc
Confidence            9999999999999999999999999999999998765321 12222 22222 2348899999999999999998 8899


Q ss_pred             cccEEeeCCCcccCCC
Q 044670          235 TGLNLVVDGGFSVANP  250 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~~  250 (302)
                      ||+.|.+|||.....+
T Consensus       241 tG~~i~vdGg~~~~~~  256 (262)
T 3ksu_A          241 NGQTIFANGGYTTREG  256 (262)
T ss_dssp             CSCEEEESTTCCCC--
T ss_pred             cCCEEEECCCccCCCc
Confidence            9999999999875543

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.7e-45  Score=317.83  Aligned_cols=239  Identities=21%  Similarity=0.221  Sum_probs=208.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ||++|||||++|||++++++|+++|  ++|++++|+.+..+++.+.++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            7999999999999999999999985  78999999998888888877778999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+... ..++.+.+.++|++++++|+.|+++++++++|+|.+++ ++||++||.++..+.+++..|++||++++.
T Consensus        82 lvnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  159 (254)
T 3kzv_A           82 LVANAGVLEP-VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNH  159 (254)
T ss_dssp             EEEECCCCCC-CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHHHH
T ss_pred             EEECCcccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHHHH
Confidence            9999998543 25778899999999999999999999999999998754 999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC-CC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE-AS  232 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~  232 (302)
                      |++.++.|+  .||+||+|+||+|.|++......       .++..+.+....  +.+++.+|+|+|++++||+++. ..
T Consensus       160 ~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~p~dva~~v~~L~s~~~~~  235 (254)
T 3kzv_A          160 FAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK--ENNQLLDSSVPATVYAKLALHGIPD  235 (254)
T ss_dssp             HHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH--TTC----CHHHHHHHHHHHHHCCCG
T ss_pred             HHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHH--hcCCcCCcccHHHHHHHHHhhcccC
Confidence            999999998  58999999999999998765422       234444443332  2388999999999999999988 48


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+.|.+|||...
T Consensus       236 ~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          236 GVNGQYLSYNDPALA  250 (254)
T ss_dssp             GGTTCEEETTCGGGG
T ss_pred             CCCccEEEecCcccc
Confidence            999999999999754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.5e-45  Score=319.16  Aligned_cols=234  Identities=22%  Similarity=0.256  Sum_probs=198.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+...+.....+  +.++.+|++|+++++++++++.++++++|+
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~  102 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG--AVALYGDFSCETGIMAFIDLLKTQTSSLRA  102 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT--CEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC--CeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            578999999999999999999999999999999999887655554443  688999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||.....  + .+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||++++.
T Consensus       103 lv~nAg~~~~~--~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  179 (260)
T 3gem_A          103 VVHNASEWLAE--T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLES  179 (260)
T ss_dssp             EEECCCCCCCC--C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHH
T ss_pred             EEECCCccCCC--C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHH
Confidence            99999987642  2 56678999999999999999999999999988888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |++.++.|+++ +|+||+|+||+|.|++...    +.........  .+.+++.+|+|+|++++||+  .+.+++|++|.
T Consensus       180 l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~----~~~~~~~~~~--~p~~r~~~~edva~~v~~L~--~~~~itG~~i~  250 (260)
T 3gem_A          180 LTLSFAARFAP-LVKVNGIAPALLMFQPKDD----AAYRANALAK--SALGIEPGAEVIYQSLRYLL--DSTYVTGTTLT  250 (260)
T ss_dssp             HHHHHHHHHTT-TCEEEEEEECTTCC---------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSCEEE
T ss_pred             HHHHHHHHHCC-CCEEEEEeecccccCCCCC----HHHHHHHHhc--CCCCCCCCHHHHHHHHHHHh--hCCCCCCCEEE
Confidence            99999999998 7999999999999987542    2222222222  23478999999999999999  46789999999


Q ss_pred             eCCCcccC
Q 044670          241 VDGGFSVA  248 (302)
Q Consensus       241 ~~gG~~~~  248 (302)
                      +|||+.+.
T Consensus       251 vdGG~~~~  258 (260)
T 3gem_A          251 VNGGRHVK  258 (260)
T ss_dssp             ESTTTTTC
T ss_pred             ECCCcccC
Confidence            99998764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=7.7e-46  Score=322.94  Aligned_cols=241  Identities=29%  Similarity=0.414  Sum_probs=206.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.. ..+.+.+   ..+.++.++.+|++|+++++++++++.+.++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999999999999544 3343333   3356889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++||+
T Consensus       107 ~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  184 (271)
T 4iin_A          107 GLSYLVNNAGVVRD--KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKG  184 (271)
T ss_dssp             SCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCcCCC--cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHH
Confidence            99999999998765  5677889999999999999999999999999998877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||+||+|+||+|.|++.....  +.....+...  .+.+++.+|+|+|+++++|+++...+++|
T Consensus       185 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~--~~~~~~~~p~dvA~~i~~l~s~~~~~itG  260 (271)
T 4iin_A          185 GMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKN--IPLNRLGSAKEVAEAVAFLLSDHSSYITG  260 (271)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGG--CTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhc--CCcCCCcCHHHHHHHHHHHhCCCcCCCcC
Confidence            9999999999999999999999999999999876532  2222222222  23378999999999999999998899999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++.+|||+.+
T Consensus       261 ~~i~vdGG~~~  271 (271)
T 4iin_A          261 ETLKVNGGLYM  271 (271)
T ss_dssp             CEEEESTTSCC
T ss_pred             CEEEeCCCeeC
Confidence            99999999763

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=9e-46  Score=323.63  Aligned_cols=239  Identities=29%  Similarity=0.419  Sum_probs=201.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC------------ccHHHHHHH---HhCCCeEEEEecCCCHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ------------DNLGQALAC---KLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+            .+..+...+   ..+.++.++.+|++|+++++
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            579999999999999999999999999999999987            344443333   33678999999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA  144 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~  144 (302)
                      ++++++.++++++|+||||||+...      ..+.++|++++++|+.++++++++++|+|.+++ .++||++||.++..+
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~~------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~  164 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAPM------SAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAG  164 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCC------SSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCC------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCC
Confidence            9999999999999999999997643      125889999999999999999999999997754 689999999998877


Q ss_pred             C----CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc--------cccCCC
Q 044670          145 G----IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM--------GNLRGQ  212 (302)
Q Consensus       145 ~----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~  212 (302)
                      .    ++...|++||++++.|++.++.|++++||+||+|+||+|.|++...... ...........        ..+ ++
T Consensus       165 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p-~~  242 (278)
T 3sx2_A          165 VGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFT-REWLAKMAAATDTPGAMGNAMP-VE  242 (278)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHH-HHHHHHHHHHCC--CTTSCSSS-CS
T ss_pred             CccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhH-HHHHhhccchhhhhhhhhhhcC-cC
Confidence            6    6677899999999999999999999999999999999999998764211 11111111110        112 57


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.+|+|+|++++||+++...+++|++|.+|||+..
T Consensus       243 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~  277 (278)
T 3sx2_A          243 VLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLN  277 (278)
T ss_dssp             SBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred             cCCHHHHHHHHHHHhCcccccccCCEEeECCCccc
Confidence            88999999999999999999999999999999764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=3.9e-45  Score=320.75  Aligned_cols=260  Identities=22%  Similarity=0.296  Sum_probs=207.2

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.+++
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG-SDLVVKCDVSLDEDIKNLKKFLEENW   97 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            478999999999  99999999999999999999999875   2333333333 46789999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +++|+||||||+....  ..++.+.+.++|++++++|+.|+++++++++|.|.++ .++||++||.++..+.++...|++
T Consensus        98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  176 (285)
T 2p91_A           98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGI  176 (285)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHH
Confidence            9999999999986420  1356678899999999999999999999999999754 589999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+||+|+||+|.|++.......+.....+... . +.+++.+|+|+|+++++++++...+
T Consensus       177 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~-p~~~~~~~~dva~~~~~l~s~~~~~  254 (285)
T 2p91_A          177 AKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKV-N-PFGKPITIEDVGDTAVFLCSDWARA  254 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHH-S-TTSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCCcccC
Confidence            9999999999999999999999999999999999875432222333333222 2 3377899999999999999988889


Q ss_pred             ccccEEeeCCCcccCCCCccccCCCccceeeccCC
Q 044670          234 VTGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDG  268 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~  268 (302)
                      ++|+.+.+|||+....    .+..+....+++|+.
T Consensus       255 ~tG~~~~vdgg~~~~~----~~~~~~~~~~~lw~~  285 (285)
T 2p91_A          255 ITGEVVHVDNGYHIMG----VFGREEEIKKEVYGD  285 (285)
T ss_dssp             CCSCEEEESTTGGGBS----CC-------------
T ss_pred             CCCCEEEECCCccccc----ccCChHHHHHHhcCC
Confidence            9999999999987642    335567778888863

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.7e-46  Score=323.39  Aligned_cols=239  Identities=24%  Similarity=0.352  Sum_probs=197.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.   ..+.++.++.++.+|++|+++++++++.+.+ ++++|+
T Consensus         7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~g~id~   82 (257)
T 3tl3_A            7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLGDRARFAAADVTDEAAVASALDLAET-MGTLRI   82 (257)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTCTTEEEEECCTTCHHHHHHHHHHHHH-HSCEEE
T ss_pred             ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcCCceEEEECCCCCHHHHHHHHHHHHH-hCCCCE
Confidence            579999999999999999999999999999999996543   3344567899999999999999999998877 899999


Q ss_pred             EEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc--------CCCCEEEEEcCcccccCCCCChh
Q 044670           81 MYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP--------QHKGCILFTASACTEIAGIGSPA  150 (302)
Q Consensus        81 lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~iv~~sS~~~~~~~~~~~~  150 (302)
                      ||||||+....  ..+..+.+.++|++++++|+.++++++++++|+|.+        ++.++||++||.++..+.+++..
T Consensus        83 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  162 (257)
T 3tl3_A           83 VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAA  162 (257)
T ss_dssp             EEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHH
T ss_pred             EEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCcc
Confidence            99999975421  012235789999999999999999999999999987        56789999999999988888899


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++||++++.|++.++.|++++||+||+|+||+|.|++....  .+.....+.... +..+++.+|+|+|++++||+++ 
T Consensus       163 Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~-~~~~r~~~p~dva~~v~~l~s~-  238 (257)
T 3tl3_A          163 YSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQV-PHPSRLGNPDEYGALAVHIIEN-  238 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTS-SSSCSCBCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcC-CCCCCccCHHHHHHHHHHHhcC-
Confidence            999999999999999999999999999999999999987653  334433333333 3227899999999999999976 


Q ss_pred             CCCccccEEeeCCCcccC
Q 044670          231 ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~~  248 (302)
                       .+++|++|.+|||+.+.
T Consensus       239 -~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          239 -PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             -TTCCSCEEEESTTC---
T ss_pred             -CCCCCCEEEECCCccCC
Confidence             68999999999998754

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=9.3e-46  Score=319.80  Aligned_cols=240  Identities=26%  Similarity=0.386  Sum_probs=209.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +|++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|+++++++++++.++++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            689999999999999999999999999999999987776665544   46788999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++ .++||++||.++..+.++...|++||+++
T Consensus        82 ~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            99999998654  4777889999999999999999999999999998766 68999999999999989999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +.+++.++.|++++||+||+|+||++.|++.....         ..+.....+... . +.+++.+|+|+|++++||+++
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~r~~~p~dvA~~v~~l~s~  237 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR-I-TLGRLSEPEDVAACVSYLASP  237 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT-C-TTCSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999754210         011112222222 2 337899999999999999998


Q ss_pred             CCCCccccEEeeCCCcc
Q 044670          230 EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~  246 (302)
                      ...+++|+++.+|||+.
T Consensus       238 ~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          238 DSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             GGTTCCSCEEEESSSSS
T ss_pred             cccCCCCCEEEeCCCcc
Confidence            88899999999999975

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-45  Score=318.24  Aligned_cols=241  Identities=31%  Similarity=0.432  Sum_probs=208.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+. ++..+.+. . .++.+|++|+++++++++++.++++++|+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~-~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   80 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG-G-AFFQVDLEDERERVRFVEEAAYALGRVDV   80 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT-C-EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh-C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999999887 66666554 4 78999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        81 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  158 (256)
T 2d1y_A           81 LVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVN  158 (256)
T ss_dssp             EEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHH
Confidence            9999998754  57778899999999999999999999999999988778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++.|++++||+||+|+||++.|++....    ...++....+. .. .+.+++.+|+|+|+++++++++...+++|
T Consensus       159 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~dvA~~~~~l~s~~~~~~~G  236 (256)
T 2d1y_A          159 LTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE-DL-HALRRLGKPEEVAEAVLFLASEKASFITG  236 (256)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH-TT-STTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHH-hc-CCCCCCcCHHHHHHHHHHHhCchhcCCCC
Confidence            99999999999999999999999999875421    00111111222 11 23378999999999999999988889999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +.+.+|||..+.
T Consensus       237 ~~~~v~gG~~~~  248 (256)
T 2d1y_A          237 AILPVDGGMTAS  248 (256)
T ss_dssp             CEEEESTTGGGB
T ss_pred             CEEEECCCcccc
Confidence            999999997653

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=6.4e-46  Score=322.54  Aligned_cols=235  Identities=28%  Similarity=0.409  Sum_probs=205.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+...        ....+.+|++|.++++++++++.++++++|+
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~--------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~   97 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA--------ADLHLPGDLREAAYADGLPGAVAAGLGRLDI   97 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC--------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH--------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999999999999999999999999999999999866432        1244589999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||++++.
T Consensus        98 lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  175 (266)
T 3uxy_A           98 VVNNAGVISR--GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALAS  175 (266)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHH
Confidence            9999998765  57788899999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCH-HHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINP-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++.++.|++++||+||+|+||+|.|++....    .... +....+. .. .+.+++.+|+|+|++++||+++.+.+++
T Consensus       176 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~-~p~~r~~~pedvA~~v~~L~s~~~~~it  253 (266)
T 3uxy_A          176 LTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELG-RT-VPLGRIAEPEDIADVVLFLASDAARYLC  253 (266)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHH-TT-STTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHH-hc-CCCCCCcCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999976431    1111 2222222 22 2348899999999999999999999999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |++|.+|||..+
T Consensus       254 G~~i~vdGG~~~  265 (266)
T 3uxy_A          254 GSLVEVNGGKAV  265 (266)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECcCEeC
Confidence            999999999764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=2.7e-46  Score=322.79  Aligned_cols=241  Identities=36%  Similarity=0.470  Sum_probs=211.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999999988887777666667889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||.++..+.++...|++||++++.
T Consensus        83 lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (254)
T 1hdc_A           83 LVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRG  160 (254)
T ss_dssp             EEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHH
Confidence            9999998654  46778899999999999999999999999999987778999999999999888999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCC-CHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-NAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +++.++.|++++||+||+|+||+++|++......  .....+...  .+.+++. +|+|+|++++++++++..+++|+.+
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~--~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~  236 (254)
T 1hdc_A          161 LSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI--RQGEGNYPN--TPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC--CCSTTSCTT--STTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEecccCcCccccccch--hHHHHHHhc--CCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEE
Confidence            9999999999999999999999999987542100  000001111  1236788 9999999999999988889999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       237 ~vdgG~~~  244 (254)
T 1hdc_A          237 AVDGGWTT  244 (254)
T ss_dssp             EESTTTTT
T ss_pred             EECCCccc
Confidence            99999765

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=1.8e-45  Score=318.73  Aligned_cols=241  Identities=25%  Similarity=0.332  Sum_probs=207.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|+++++++++++.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            47899999999999999999999999999999999987776665544     2378899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      + +|+||||||+...  .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||..+..+.++...|++||
T Consensus        85 g-id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  161 (260)
T 2z1n_A           85 G-ADILVYSTGGPRP--GRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMR  161 (260)
T ss_dssp             C-CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHT
T ss_pred             C-CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHH
Confidence            8 9999999997653  467788999999999999999999999999999877789999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHH-HHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAI-LEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.+++.++.|++++||+||+|+||+++|++.....        ..+.. ...+.. . .+.+++.+|+|+|++++++
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~p~~r~~~~~dva~~v~~l  239 (260)
T 2z1n_A          162 LPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMAS-R-IPMGRVGKPEELASVVAFL  239 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------C-CTTSSCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHh-c-CCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999999875210        01111 111211 1 2347899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCcc
Q 044670          227 ATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++...+++|+.+.+|||+.
T Consensus       240 ~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          240 ASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTTT
T ss_pred             hCccccCCCCCEEEeCCCcc
Confidence            99888899999999999964

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=6.9e-46  Score=320.09  Aligned_cols=243  Identities=31%  Similarity=0.466  Sum_probs=212.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+
T Consensus         4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999999999988887777777778899999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++ ++||++||.++..+.++...|++||++++.
T Consensus        84 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  160 (253)
T 1hxh_A           84 LVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSA  160 (253)
T ss_dssp             EEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHH
Confidence            9999998654  5778889999999999999999999999999998776 999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCC--CcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc--cccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQY--GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM--GNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~--gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++.|++++  ||+||+|+||+++|++..... .+......+...  ..+.+++.+|+|+|++++++++++..+++|
T Consensus       161 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG  239 (253)
T 1hxh_A          161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL-PKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSG  239 (253)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS-CTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc-chhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccCCCC
Confidence            999999999888  999999999999999864311 111111111110  123377899999999999999988889999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++.+|||+..
T Consensus       240 ~~~~vdgG~~~  250 (253)
T 1hxh_A          240 SELHADNSILG  250 (253)
T ss_dssp             CEEEESSSCTT
T ss_pred             cEEEECCCccc
Confidence            99999999754

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=4.2e-45  Score=316.84  Aligned_cols=243  Identities=30%  Similarity=0.480  Sum_probs=211.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+..++.++.+|++|+++++++++++.++++++|+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999988877776666557788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++.+++|+.++++++++++|+|.+++ .++||++||..+..+.++...|++||++++
T Consensus        90 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~  167 (263)
T 3ak4_A           90 LCANAGVSTM--RPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVF  167 (263)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHH
Confidence            9999998653  4677889999999999999999999999999998766 799999999999988889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CC-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------IN-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++.++.|++++||+||+|+||+++|++.....        .. ++....+...  .+.+++.+|+|+|+++++++++.
T Consensus       168 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dvA~~v~~l~s~~  245 (263)
T 3ak4_A          168 GWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL--TPLGRIEEPEDVADVVVFLASDA  245 (263)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT--CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999754210        00 1112222222  23378999999999999999988


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++|+.+.+|||+.+
T Consensus       246 ~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          246 ARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             ccCCCCCEEEECcCEeC
Confidence            88999999999999653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.2e-45  Score=320.89  Aligned_cols=242  Identities=26%  Similarity=0.304  Sum_probs=209.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.  .++.++.+|++|+++++++++++.+.++++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999999999887777666653  268889999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC----CEEEEEcCcccccCCCCCh-hHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK----GCILFTASACTEIAGIGSP-AYTV  153 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~iv~~sS~~~~~~~~~~~-~Y~~  153 (302)
                      |+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++.    ++||++||.++..+.++.. .|++
T Consensus       107 D~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~a  184 (276)
T 2b4q_A          107 DILVNNAGTSWG--AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGP  184 (276)
T ss_dssp             SEEEECCCCCCC--CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHH
T ss_pred             CEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHH
Confidence            999999998654  46778889999999999999999999999999976555    8999999999988888888 9999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+||+|+||++.|++.....  ......+......+.+++.+|+|+|+++++|+++...+
T Consensus       185 sK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  262 (276)
T 2b4q_A          185 SKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIA--NDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAY  262 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHH--HCHHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcc--hhHHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999864321  11112222200123478999999999999999988889


Q ss_pred             ccccEEeeCCCcc
Q 044670          234 VTGLNLVVDGGFS  246 (302)
Q Consensus       234 ~~G~~~~~~gG~~  246 (302)
                      ++|+++.+|||+.
T Consensus       263 ~tG~~i~vdGG~~  275 (276)
T 2b4q_A          263 MTGNVIPIDGGFH  275 (276)
T ss_dssp             CCSCEEEESTTTT
T ss_pred             CCCCEEEeCCCcc
Confidence            9999999999965

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=5.8e-45  Score=318.13  Aligned_cols=239  Identities=26%  Similarity=0.329  Sum_probs=203.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh----CCCeEEEEecCCCH----HHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL----GEDVCYIHCDVTSE----DEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~----~~~~~~~~~Dl~~~----~~v~~~~~~~   71 (302)
                      |+||++|||||++|||++++++|+++|++|++++| +.+..+++.+++    +.++.++.+|++|+    ++++++++++
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            47899999999999999999999999999999999 777766665554    56789999999999    9999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCH-----------HHHHHHHHHHhhHHHHHHHHHHHhhccCCC------CEEE
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPK-----------SDLDRVLAVNTTGGFLGAKHAARVMIPQHK------GCIL  134 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~iv  134 (302)
                      .++++++|+||||||+...  .++.+.+.           ++|++++++|+.++++++++++|.|. ++.      ++||
T Consensus        89 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv  165 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAYYP--TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEE
T ss_pred             HHhcCCCCEEEECCCCCCC--CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEE
Confidence            9999999999999998654  46667777           99999999999999999999999997 555      8999


Q ss_pred             EEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCC-C
Q 044670          135 FTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQ-V  213 (302)
Q Consensus       135 ~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~  213 (302)
                      ++||.++..+.++...|++||++++.|++.++.|++++||+||+|+||++.|+ . .  ..+.....+... . +.++ +
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~--~~~~~~~~~~~~-~-p~~r~~  239 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A--MPQETQEEYRRK-V-PLGQSE  239 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S--SCHHHHHHHHTT-C-TTTSCC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c--CCHHHHHHHHhc-C-CCCCCC
Confidence            99999999999999999999999999999999999999999999999999999 2 1  233433333332 2 3366 8


Q ss_pred             CCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          214 LNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       214 ~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .+|+|+|+++++++++...+++|+++.+|||+.+.
T Consensus       240 ~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~~  274 (276)
T 1mxh_A          240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLILA  274 (276)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCHHHHHHHHHHHhCccccCccCcEEEECCchhcc
Confidence            99999999999999988889999999999997643

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=7.5e-45  Score=315.75  Aligned_cols=248  Identities=23%  Similarity=0.274  Sum_probs=214.7

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccHHHHHH---HHhCC-CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGE-DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.+..+.+.   +..+. ++.++.+|++|+++++++++++.++
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            579999999999  56999999999999999999999875444333   33333 7899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           75 YGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      ++++|+||||||+....  ..++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|+
T Consensus        85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  162 (266)
T 3oig_A           85 VGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMG  162 (266)
T ss_dssp             HSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHH
T ss_pred             hCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhH
Confidence            99999999999986521  246778899999999999999999999999999863  68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||++++.|++.++.|++++||+||+|+||+|.|++.......+.....+....  +.+++.+|+|+|+++++|+++...
T Consensus       163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~dva~~v~~l~s~~~~  240 (266)
T 3oig_A          163 VAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERA--PLRRTTTPEEVGDTAAFLFSDMSR  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHS--TTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHcCCchh
Confidence            999999999999999999999999999999999998876543334444444332  237899999999999999999889


Q ss_pred             CccccEEeeCCCcccCCCCc
Q 044670          233 DVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~~~~~  252 (302)
                      +++|+.+.+|||+....+..
T Consensus       241 ~~tG~~i~vdGG~~~~~~~~  260 (266)
T 3oig_A          241 GITGENLHVDSGFHITARLE  260 (266)
T ss_dssp             TCCSCEEEESTTGGGCCCCC
T ss_pred             cCcCCEEEECCCeEEeeecC
Confidence            99999999999999776654

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-45  Score=321.49  Aligned_cols=241  Identities=27%  Similarity=0.376  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC------------ccHHHHHHH---HhCCCeEEEEecCCCHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ------------DNLGQALAC---KLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~------------~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+            .+..+....   ..+.++.++.+|++|+++++
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            579999999999999999999999999999999987            333333332   23578899999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG  145 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~  145 (302)
                      ++++++.++++++|+||||||+...   . .+.+.++|++++++|+.|+++++++++|+|  .+.++||++||.++..+.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~---~-~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~  161 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPL---G-AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLIAA  161 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC---C-TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcc---c-CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcccc
Confidence            9999999999999999999998754   2 337889999999999999999999999999  346899999998887655


Q ss_pred             -----------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHH--
Q 044670          146 -----------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFL--  203 (302)
Q Consensus       146 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~--  203 (302)
                                 ++...|++||++++.+++.++.|++++||+||+|+||+|.|++.....         ..+.......  
T Consensus       162 ~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (287)
T 3pxx_A          162 AQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAF  241 (287)
T ss_dssp             HCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHG
T ss_pred             cccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhh
Confidence                       566789999999999999999999999999999999999999875311         0011111111  


Q ss_pred             -HhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          204 -SEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       204 -~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                       .....+ +++.+|+|+|++++||+++.++++||++|.+|||+.+.
T Consensus       242 ~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          242 PAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             GGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             hhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence             111122 78999999999999999999999999999999998753

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.4e-45  Score=316.33  Aligned_cols=237  Identities=34%  Similarity=0.529  Sum_probs=211.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+.+...+.++.+|++|+++++++++++.++++++|+
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57899999999999999999999999999999999988877776666556889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.|++++++.++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        85 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  162 (260)
T 1nff_A           85 LVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRG  162 (260)
T ss_dssp             EEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHH
Confidence            9999998754  57778899999999999999999999999999987778999999999999988999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+++|++.. .. .+.    + .  ..+.+++.+|+|+|+++++++++...+++|+.+.
T Consensus       163 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~-~~~----~-~--~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~  233 (260)
T 1nff_A          163 LTKSTALELGPSGIRVNSIHPGLVKTPMTD-WV-PED----I-F--QTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  233 (260)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TS-CTT----C-S--CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhCccCcEEEEEEeCCCCCCccc-cc-hhh----H-H--hCccCCCCCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            999999999999999999999999999864 11 111    0 0  1233778999999999999999888899999999


Q ss_pred             eCCCcccC
Q 044670          241 VDGGFSVA  248 (302)
Q Consensus       241 ~~gG~~~~  248 (302)
                      +|||....
T Consensus       234 v~gG~~~~  241 (260)
T 1nff_A          234 VDGGTVAG  241 (260)
T ss_dssp             ESTTGGGS
T ss_pred             ECCCeecc
Confidence            99998754

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.9e-45  Score=316.55  Aligned_cols=242  Identities=27%  Similarity=0.416  Sum_probs=207.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+  +...+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67999999999999999999999999999999999876  2222222   457888999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++
T Consensus        80 id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           80 VDILVNNAGIQHV--APVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            9999999998654  46778899999999999999999999999999988778999999999999988999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHH---H----HHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAI---L----EAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~---~----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++.+++.++.|++++||+||+|+||+++|++...... .+..   .    ..+... ..+.+++.+|+|+|+++++++++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~dvA~~~~~l~s~  236 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAE-KQPSLAFVTPEHLGELVLFLCSE  236 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTT-TCTTCCCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhc-cCCCCCCcCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999997642100 0011   1    111011 12347899999999999999998


Q ss_pred             CCCCccccEEeeCCCccc
Q 044670          230 EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~  247 (302)
                      +..+++|+.+.+|||+.+
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (255)
T 2q2v_A          237 AGSQVRGAAWNVDGGWLA  254 (255)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCCEEEECCCccC
Confidence            888999999999999753

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.3e-44  Score=317.86  Aligned_cols=240  Identities=25%  Similarity=0.365  Sum_probs=205.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh----CCCeEEEEecCCC----HHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL----GEDVCYIHCDVTS----EDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~----~~~v~~~~~~~   71 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+. +..+++.+.+    +.++.++.+|++|    +++++++++++
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999999998 6666554433    4678999999999    99999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCC-----CC-----CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC------CCEEEE
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASV-----LD-----TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH------KGCILF  135 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~  135 (302)
                      .+.++++|+||||||+...  .++     .+     .+.++|++++++|+.+++++++.++|.|.+++      .++||+
T Consensus       101 ~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~  178 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAFYP--TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVN  178 (288)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEE
T ss_pred             HHhcCCCCEEEECCCCCCC--CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEE
Confidence            9999999999999998654  344     45     77899999999999999999999999998765      689999


Q ss_pred             EcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCC-C
Q 044670          136 TASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV-L  214 (302)
Q Consensus       136 ~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  214 (302)
                      +||.++..+.++...|++||++++.|++.++.|++++||+||+|+||+|.|++ . .  .+.....+....  +.+++ .
T Consensus       179 isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~--p~~r~~~  252 (288)
T 2x9g_A          179 LCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKV--PLGRREA  252 (288)
T ss_dssp             ECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTC--TTTSSCC
T ss_pred             EecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhC--CCCCCCC
Confidence            99999999999999999999999999999999999999999999999999998 3 2  233333333322  23677 8


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +|+|+|++++||+++...+++|+++.+|||+.+.
T Consensus       253 ~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  286 (288)
T 2x9g_A          253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSLV  286 (288)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEECcchhhh
Confidence            9999999999999998899999999999997643

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=5.5e-45  Score=316.68  Aligned_cols=240  Identities=30%  Similarity=0.450  Sum_probs=210.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccHH-HH----HHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNLG-QA----LACKLGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++||++|||||+  +|||++++++|+++|++|++++|+.... ++    +.+..+.++.++.+|++|+++++++++++.+
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            579999999999  9999999999999999999998876543 32    3333467899999999999999999999999


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--CCChhH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--IGSPAY  151 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--~~~~~Y  151 (302)
                      +++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.  ++...|
T Consensus        98 ~~g~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  175 (267)
T 3gdg_A           98 DFGQIDAFIANAGATAD--SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSY  175 (267)
T ss_dssp             HTSCCSEEEECCCCCCC--SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHH
T ss_pred             HcCCCCEEEECCCcCCC--CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcc
Confidence            99999999999998765  46788899999999999999999999999999988778999999999887765  578899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||++++.+++.++.|++++ |+||+|+||+|.|++....  .++....+... . +.+++.+|+|+|++++||+++..
T Consensus       176 ~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-~-~~~r~~~~~dva~~~~~l~s~~~  250 (267)
T 3gdg_A          176 NVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV--PKETQQLWHSM-I-PMGRDGLAKELKGAYVYFASDAS  250 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS--CHHHHHHHHTT-S-TTSSCEETHHHHHHHHHHHSTTC
T ss_pred             hHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC--CHHHHHHHHhc-C-CCCCCcCHHHHHhHhheeecCcc
Confidence            999999999999999999987 9999999999999987644  33333333332 2 34889999999999999999999


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+++.+|||+.+
T Consensus       251 ~~itG~~i~vdgG~~~  266 (267)
T 3gdg_A          251 TYTTGADLLIDGGYTT  266 (267)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             ccccCCEEEECCceec
Confidence            9999999999999874

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=4.8e-45  Score=316.58  Aligned_cols=246  Identities=23%  Similarity=0.330  Sum_probs=205.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH-HHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ-ALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|++|||||++|||++++++|+++|++|++++|+..... .+.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5799999999999999999999999999999987765433 333322   457899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCc-cc-ccCCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA-CT-EIAGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~-~~-~~~~~~~~~Y~~sK  155 (302)
                      +|+||||||.......++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||. .. ..+.++...|++||
T Consensus        86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asK  165 (264)
T 3i4f_A           86 IDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAK  165 (264)
T ss_dssp             CCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHH
T ss_pred             CCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHH
Confidence            99999999954333357788899999999999999999999999999988888999999987 44 45667789999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||+||+|+||+|.|++.....  +..... .... .+.+++.+|+|+|+++++|+++...+++
T Consensus       166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~-~~~~-~p~~r~~~~~dva~~v~~l~s~~~~~it  241 (264)
T 3i4f_A          166 VGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQL-KEHN-TPIGRSGTGEDIARTISFLCEDDSDMIT  241 (264)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC----------CCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHH-Hhhc-CCCCCCcCHHHHHHHHHHHcCcccCCCC
Confidence            99999999999999999999999999999999876542  222221 2222 2348899999999999999999889999


Q ss_pred             ccEEeeCCCcccCCCC
Q 044670          236 GLNLVVDGGFSVANPS  251 (302)
Q Consensus       236 G~~~~~~gG~~~~~~~  251 (302)
                      |++|.+|||+.....+
T Consensus       242 G~~i~vdGG~~~~~~~  257 (264)
T 3i4f_A          242 GTIIEVTGAVDVIHRE  257 (264)
T ss_dssp             SCEEEESCSCCCCC--
T ss_pred             CcEEEEcCceeeccCC
Confidence            9999999998876554

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=2.2e-45  Score=321.02  Aligned_cols=242  Identities=26%  Similarity=0.365  Sum_probs=210.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999987776655544   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh--hccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.++++++++++|.  |.+++.++||++||.++..+.++...|++||
T Consensus       100 iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 2rhc_B          100 VDVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASK  177 (277)
T ss_dssp             CSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHH
Confidence            9999999998654  46778899999999999999999999999998  8766679999999999999889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--------C-HHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--------N-PAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.+++.++.|++++||+||+|+||++.|++......        . ++....+... . +.+++.+|+|+|+++++|
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~r~~~~~dvA~~v~~l  255 (277)
T 2rhc_B          178 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR-V-PIGRYVQPSEVAEMVAYL  255 (277)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHH-S-TTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999997542100        0 1112222222 2 337899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCcc
Q 044670          227 ATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++++..+++|+++.+|||+.
T Consensus       256 ~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          256 IGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             HSGGGTTCCSCEEEESTTCC
T ss_pred             hCchhcCCCCcEEEECCCcc
Confidence            99888899999999999964

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-45  Score=319.64  Aligned_cols=247  Identities=30%  Similarity=0.368  Sum_probs=200.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.++.+++.+.+      +.++.++.+|++|+++++++++++.++
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999988777766554      246889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCC----CHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccCCCCCh
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDT----PKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGSP  149 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~~~~  149 (302)
                      ++++|+||||||....  .++.+.    +.++|++++++|+.|+++++++++|.|.+++ ++||++||.++ ..+.++..
T Consensus        84 ~g~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (278)
T 1spx_A           84 FGKLDILVNNAGAAIP--DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFP  160 (278)
T ss_dssp             HSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSH
T ss_pred             cCCCCEEEECCCCCCC--cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCcc
Confidence            9999999999998653  355666    8999999999999999999999999997655 99999999988 88888999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-HHH------HHHHHHhccccCCCCCCHHHHHHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-PAI------LEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      .|++||++++.+++.++.|++++||+||+|+||++.|++....... +..      ...+... . +.+++.+|+|+|++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~~~~~~~dvA~~  238 (278)
T 1spx_A          161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC-V-PAGVMGQPQDIAEV  238 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH-C-TTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc-C-CCcCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999986542111 111      2222222 2 33789999999999


Q ss_pred             HHHhccCCCCC-ccccEEeeCCCcccCCCCc
Q 044670          223 ALYLATDEASD-VTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       223 ~~~l~s~~~~~-~~G~~~~~~gG~~~~~~~~  252 (302)
                      ++++++++..+ ++|+++.+|||..+.....
T Consensus       239 v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~  269 (278)
T 1spx_A          239 IAFLADRKTSSYIIGHQLVVDGGSSLIMGLH  269 (278)
T ss_dssp             HHHHHCHHHHTTCCSCEEEESTTGGGC----
T ss_pred             HHHHcCccccCcccCcEEEECCCcccccCcc
Confidence            99999877666 9999999999987655543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=1.5e-45  Score=317.81  Aligned_cols=242  Identities=26%  Similarity=0.415  Sum_probs=178.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988877766554   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCC-CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+... ...++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++.   ++...|++||+
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~  163 (253)
T 3qiv_A           87 IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKV  163 (253)
T ss_dssp             CCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHH
T ss_pred             CCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHH
Confidence            9999999998431 1245677899999999999999999999999999988788999999999876   45678999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||+||+|+||+|.|++..... ..+..+.+....  +.+++.+|+|+|+++++++++...+++|
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~tG  240 (253)
T 3qiv_A          164 GINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT-PKEMVDDIVKGL--PLSRMGTPDDLVGMCLFLLSDEASWITG  240 (253)
T ss_dssp             HHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------CCHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC-cHHHHHHHhccC--CCCCCCCHHHHHHHHHHHcCccccCCCC
Confidence            9999999999999999999999999999999876432 222333333322  2377899999999999999998899999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      ++|++|||..++
T Consensus       241 ~~~~vdgG~~~~  252 (253)
T 3qiv_A          241 QIFNVDGGQIIR  252 (253)
T ss_dssp             CEEEC-------
T ss_pred             CEEEECCCeecC
Confidence            999999998754

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=4.9e-45  Score=314.23  Aligned_cols=238  Identities=29%  Similarity=0.367  Sum_probs=193.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.     +..  .+.++.+|++|+++++++++++.++++++|+
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~   77 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQY--PFATEVMDVADAAQVAQVCQRLLAETERLDA   77 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCC--SSEEEECCTTCHHHHHHHHHHHHHHCSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcC--CceEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998752     111  2688899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||++++.
T Consensus        78 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  155 (250)
T 2fwm_X           78 LVNAAGILRM--GATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKS  155 (250)
T ss_dssp             EEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHH
Confidence            9999998654  57788899999999999999999999999999987778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH-HHHH---h--ccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE-AFLS---E--MGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~---~--~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +++.++.|++++||+||+|+||+++|++.......+.... .+..   .  ...+.+++.+|+|+|++++++++++..++
T Consensus       156 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  235 (250)
T 2fwm_X          156 LALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLASHI  235 (250)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999998654211111111 1111   0  01233778999999999999999888899


Q ss_pred             cccEEeeCCCccc
Q 044670          235 TGLNLVVDGGFSV  247 (302)
Q Consensus       235 ~G~~~~~~gG~~~  247 (302)
                      +|+.+.+|||..+
T Consensus       236 tG~~i~vdGG~~~  248 (250)
T 2fwm_X          236 TLQDIVVDGGSTL  248 (250)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCCEEEECCCccc
Confidence            9999999999754

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7e-45  Score=319.13  Aligned_cols=261  Identities=22%  Similarity=0.280  Sum_probs=217.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-------HHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-------LGQALAC---KLGEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-------~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+       ..++..+   ..+.++.++.+|++|++++++++++
T Consensus         7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            57999999999999999999999999999999999876       2333332   3367899999999999999999999


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-CCCh
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSP  149 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~~~~  149 (302)
                      +.++++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.++||++||..+..+. ++..
T Consensus        87 ~~~~~g~id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  164 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASAINL--GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPT  164 (285)
T ss_dssp             HHHHHSCCSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSH
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCc
Confidence            99999999999999998764  57888999999999999999999999999999988888999999999888775 7889


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCC-cccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPY-GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      .|++||++++.|++.++.|++++||+||+|+|| .+.|++..          ..... ..+.+++.+|+|+|++++||++
T Consensus       165 ~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~----------~~~~~-~~~~~r~~~pedvA~~~~~l~s  233 (285)
T 3sc4_A          165 PYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQ----------NLLGG-DEAMARSRKPEVYADAAYVVLN  233 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHH----------HHHTS-CCCCTTCBCTHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHH----------hhccc-cccccCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999 57776532          22222 1234789999999999999999


Q ss_pred             CCCCCccccEEeeCCCcccCCCC-ccccCC--CccceeeccCCccccchh
Q 044670          229 DEASDVTGLNLVVDGGFSVANPS-LMKFAS--PFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~g~  275 (302)
                      +.. +++|+.+.+|||+....-. ...+..  ........|.....++|+
T Consensus       234 ~~~-~~tG~~i~~dgg~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  282 (285)
T 3sc4_A          234 KPS-SYTGNTLLCEDVLLESGVTDLSVYDCVPGSELGVDLWVDSPNPPGY  282 (285)
T ss_dssp             SCT-TCCSCEEEHHHHHHHHTCCCGGGGBSSTTSCCCCCTTCSCSSCTTC
T ss_pred             Ccc-cccceEEEEcCchhccCcccceeeeecCccccCCccCCCCCCCCCC
Confidence            887 9999999999998753222 211111  223455556666655553

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-45  Score=315.59  Aligned_cols=231  Identities=26%  Similarity=0.421  Sum_probs=201.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+....      .++.++.+|++|+++++++++++.+++|++|+
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   99 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD------PDIHTVAGDISKPETADRIVREGIERFGRIDS   99 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCE
Confidence            478999999999999999999999999999999998764321      36889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc--CCCCChhHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI--AGIGSPAYTVSKYGI  158 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~--~~~~~~~Y~~sK~a~  158 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||..+..  +..+...|++||+++
T Consensus       100 lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~  177 (260)
T 3un1_A          100 LVNNAGVFLA--KPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGL  177 (260)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHH
Confidence            9999998764  577888999999999999999999999999999888889999999987764  344668999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.+++.++.|++++||+||+|+||+|+|++...     ...... ... .+.+++.+|+|+|++++||  +.+.+++|++
T Consensus       178 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~-~~~-~p~~r~~~~~dva~av~~L--~~~~~itG~~  248 (260)
T 3un1_A          178 NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTL-AGL-HPVGRMGEIRDVVDAVLYL--EHAGFITGEI  248 (260)
T ss_dssp             HHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHH-HTT-STTSSCBCHHHHHHHHHHH--HHCTTCCSCE
T ss_pred             HHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHH-hcc-CCCCCCcCHHHHHHHHHHh--cccCCCCCcE
Confidence            999999999999999999999999999998743     222222 222 2348899999999999999  4567899999


Q ss_pred             EeeCCCcccC
Q 044670          239 LVVDGGFSVA  248 (302)
Q Consensus       239 ~~~~gG~~~~  248 (302)
                      |++|||+.+.
T Consensus       249 i~vdGG~~~~  258 (260)
T 3un1_A          249 LHVDGGQNAG  258 (260)
T ss_dssp             EEESTTGGGC
T ss_pred             EEECCCeecc
Confidence            9999998753

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=2e-44  Score=315.49  Aligned_cols=245  Identities=22%  Similarity=0.245  Sum_probs=211.5

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCc--cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQD--NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+.  +..+++.+.. .++.++.+|++|+++++++++++.++++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF-NPAAVLPCDVISDQEIKDLFVELGKVWD  102 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG-CCSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc-CCceEEEeecCCHHHHHHHHHHHHHHcC
Confidence            578999999998  7799999999999999999999987  4444444444 3588999999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCCC-CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           77 KLDIMYNNAGIVDRG--FASVLD-TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      ++|+||||||+....  ..++.+ .+.++|++++++|+.+++++++++++.|.++ .++||++||.++..+.++...|++
T Consensus       103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  181 (280)
T 3nrc_A          103 GLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGV  181 (280)
T ss_dssp             SCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHH
T ss_pred             CCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHH
Confidence            999999999986531  123344 7899999999999999999999999999765 799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.|++.++.|++++||+||+|+||+|.|++.......++....+....  +.+++.+|+|+|++++||+++...+
T Consensus       182 sKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~~~~~~pedvA~~v~~l~s~~~~~  259 (280)
T 3nrc_A          182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVS--PLKKNVDIMEVGNTVAFLCSDMATG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHS--TTCSCCCHHHHHHHHHHTTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhCcccCC
Confidence            99999999999999999999999999999999999876543344444433332  3388999999999999999998899


Q ss_pred             ccccEEeeCCCcccCC
Q 044670          234 VTGLNLVVDGGFSVAN  249 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~  249 (302)
                      ++|++|.+|||+.+..
T Consensus       260 ~tG~~i~vdgG~~~~~  275 (280)
T 3nrc_A          260 ITGEVVHVDAGYHCVS  275 (280)
T ss_dssp             CCSCEEEESTTGGGCC
T ss_pred             cCCcEEEECCCccccC
Confidence            9999999999988653

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-44  Score=322.81  Aligned_cols=240  Identities=23%  Similarity=0.292  Sum_probs=209.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHHh----CCCeEEEEecCCCHH-------------
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACKL----GEDVCYIHCDVTSED-------------   62 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~-------------   62 (302)
                      |++|++|||||++|||++++++|+++|++|++++ |+.+..+++.+++    +.++.++.+|++|++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            4689999999999999999999999999999999 9887776665543    467899999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCC--------------HHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           63 ----EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTP--------------KSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        63 ----~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                          +++++++++.++++++|+||||||+...  .++.+.+              .++|++++++|+.++++++++++|.
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~  201 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHR  201 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999999999999998754  4666777              8999999999999999999999999


Q ss_pred             hccCC------CCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH
Q 044670          125 MIPQH------KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI  198 (302)
Q Consensus       125 l~~~~------~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~  198 (302)
                      |.+++      .++||++||.++..+.++...|++||++++.|++.++.|++++||+||+|+||+|.|++ ..   .+..
T Consensus       202 m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~---~~~~  277 (328)
T 2qhx_A          202 VAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM---PPAV  277 (328)
T ss_dssp             HHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS---CHHH
T ss_pred             HHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc---cHHH
Confidence            98766      78999999999999999999999999999999999999999999999999999999998 32   2333


Q ss_pred             HHHHHHhccccCC-CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          199 LEAFLSEMGNLRG-QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       199 ~~~~~~~~~~~~~-~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      ...+... . +.+ ++.+|+|+|++++||+++...+++|++|.+|||+.+.
T Consensus       278 ~~~~~~~-~-p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          278 WEGHRSK-V-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             HHHHHTT-C-TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhh-C-CCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence            3333322 2 236 7999999999999999988899999999999998654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.5e-44  Score=313.61  Aligned_cols=239  Identities=30%  Similarity=0.449  Sum_probs=209.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+.        +.++.++.+|++|+++++++++++.++++++|+
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~   77 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISV   77 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998765        356789999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        78 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  155 (264)
T 2dtx_A           78 LVNNAGIESY--GKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIG  155 (264)
T ss_dssp             EEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHH
Confidence            9999998654  57788899999999999999999999999999988778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCH----HHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INP----AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +++.++.|++++ |+||+|+||++.|++.....     ..+    +....+... . +.+++.+|+|+|+++++++++..
T Consensus       156 ~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-p~~~~~~p~dvA~~v~~l~s~~~  232 (264)
T 2dtx_A          156 LTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHE-H-PMQRIGKPQEVASAVAFLASREA  232 (264)
T ss_dssp             HHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHH-S-TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCchh
Confidence            999999999998 99999999999999764320     011    222222222 2 33789999999999999999888


Q ss_pred             CCccccEEeeCCCcccCCCCc
Q 044670          232 SDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      .+++|+++.+|||+.+..|..
T Consensus       233 ~~~tG~~i~vdGG~~~~~p~~  253 (264)
T 2dtx_A          233 SFITGTCLYVDGGLSIRAPIS  253 (264)
T ss_dssp             TTCCSCEEEESTTGGGCCCCC
T ss_pred             cCCCCcEEEECCCcccCCCCC
Confidence            899999999999988766654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.6e-45  Score=323.38  Aligned_cols=241  Identities=21%  Similarity=0.245  Sum_probs=211.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |+||++|||||++|||++++++|+++|+   +|++++|+.+..+++.+++     +.++.++.+|++|+++++++++++.
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4789999999999999999999999998   9999999998887766654     4578899999999999999999999


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|++|+||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|+
T Consensus       111 ~~~g~iD~lVnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  189 (287)
T 3rku_A          111 QEFKDIDILVNNAGKALG-SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYC  189 (287)
T ss_dssp             GGGCSCCEEEECCCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HhcCCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHH
Confidence            999999999999998642 1477888999999999999999999999999999887889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +||++++.|++.++.|++++||+||+|+||+|.|++..... ...+........     ....+|+|+|++++||+++..
T Consensus       190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~p~~pedvA~~v~~l~s~~~  264 (287)
T 3rku_A          190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD-----TTPLMADDVADLIVYATSRKQ  264 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT-----SCCEEHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc-----cCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999853221 122222222222     224489999999999999999


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+++.+|||...
T Consensus       265 ~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          265 NTVIADTLIFPTNQAS  280 (287)
T ss_dssp             TEEEEEEEEEETTEEE
T ss_pred             CeEecceEEeeCCCCC
Confidence            9999999999999764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=8.2e-45  Score=312.46  Aligned_cols=237  Identities=31%  Similarity=0.485  Sum_probs=195.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+.+..++.++.+|+++.+++++++++    ++++|+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~~~id~   87 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISK----TSNLDI   87 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHT----CSCCSE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHh----cCCCCE
Confidence            4789999999999999999999999999999999999998888888888899999999999998777654    478999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        88 li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  165 (249)
T 3f9i_A           88 LVCNAGITSD--TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIG  165 (249)
T ss_dssp             EEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHH
Confidence            9999998764  45667788999999999999999999999999987778999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++....  .+.....+....  +.+++.+|+|+|+++++|+++...+++|+++.
T Consensus       166 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~  241 (249)
T 3f9i_A          166 MTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKI--PLGTYGIPEDVAYAVAFLASNNASYITGQTLH  241 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHC--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHcCCccCCccCcEEE
Confidence            99999999999999999999999999987654  344444444433  23789999999999999999988999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       242 vdgG~~~  248 (249)
T 3f9i_A          242 VNGGMLM  248 (249)
T ss_dssp             ESTTSSC
T ss_pred             ECCCEee
Confidence            9999764

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.3e-45  Score=315.00  Aligned_cols=242  Identities=23%  Similarity=0.305  Sum_probs=199.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |.+|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57999999999999999999999999999999999988877776655   567889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++
T Consensus        82 iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa  159 (264)
T 3tfo_A           82 IDVLVNNAGVMPL--SPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFA  159 (264)
T ss_dssp             CCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHH
Confidence            9999999998754  57888999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|+ + ||+||+|+||+|.|++........  ......   ...+...+|+|+|++++||+++...+.+|+
T Consensus       160 l~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~~--~~~~~~---~~~~~~~~pedvA~~v~~l~s~~~~~~~~~  232 (264)
T 3tfo_A          160 VRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHEE--TMAAMD---TYRAIALQPADIARAVRQVIEAPQSVDTTE  232 (264)
T ss_dssp             HHHHHHHHHHHC-S-SEEEEEEEECCC----------------------------CCCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccchh--HHHHHH---hhhccCCCHHHHHHHHHHHhcCCccCccce
Confidence            999999999998 5 999999999999999876432111  111111   111335799999999999999999999999


Q ss_pred             EEeeCCCcccCCCC
Q 044670          238 NLVVDGGFSVANPS  251 (302)
Q Consensus       238 ~~~~~gG~~~~~~~  251 (302)
                      ++..++|..+....
T Consensus       233 i~i~p~~~~~~~~~  246 (264)
T 3tfo_A          233 ITIRPTASGNAENL  246 (264)
T ss_dssp             EEEEECC-------
T ss_pred             EEEecCccccccCc
Confidence            99999998765444

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1e-44  Score=310.09  Aligned_cols=235  Identities=32%  Similarity=0.429  Sum_probs=204.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|++|||||++|||++++++|+++|++|++++|+.+..   .+.++  +.++.+|++| ++++++++++.+.++++|+||
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv   75 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSLG--AVPLPTDLEK-DDPKGLVKRALEALGGLHVLV   75 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHHT--CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhhC--cEEEecCCch-HHHHHHHHHHHHHcCCCCEEE
Confidence            78999999999999999999999999999999987662   23333  7889999999 999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--CCChhHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--IGSPAYTVSKYGIIA  160 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--~~~~~Y~~sK~a~~~  160 (302)
                      ||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.  ++...|++||++++.
T Consensus        76 ~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~  153 (239)
T 2ekp_A           76 HAAAVNVR--KPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLG  153 (239)
T ss_dssp             ECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHH
T ss_pred             ECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHH
Confidence            99998654  57788899999999999999999999999999987778999999999988877  888999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||++.|++.......++....+...  .+.+++.+|+|+|++++++++++..+++|+.+.
T Consensus       154 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          154 LTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITAR--IPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTT--CTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            999999999999999999999999999865321123333333222  233789999999999999999888899999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+..
T Consensus       232 vdgG~~~  238 (239)
T 2ekp_A          232 VDGGFLA  238 (239)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999753

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=2.4e-44  Score=312.86  Aligned_cols=238  Identities=24%  Similarity=0.340  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +.+|++|||||++|||++++++|+++|++|++. .|+.+..++..+.+   +.++.++.+|++|+++++++++++.++++
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999999765 46655555554443   56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc-cCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI-PQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++.+++|+.+++++++.+++.|. +++.++||++||.++..+.+++..|++||
T Consensus       104 ~id~li~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (267)
T 4iiu_A          104 AWYGVVSNAGIARD--AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAK  181 (267)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CccEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHH
Confidence            99999999998764  5777889999999999999999999999998886 45679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +|++.+++.++.|++++||+|++|+||+|.|++....   +..........  +.+++.+|+|+|++++||+++...+++
T Consensus       182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~--p~~~~~~~edva~~~~~L~s~~~~~it  256 (267)
T 4iiu_A          182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMI--PMKRMGQAEEVAGLASYLMSDIAGYVT  256 (267)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTC--TTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCCcccCcc
Confidence            9999999999999999999999999999999987653   44444444432  337899999999999999999889999


Q ss_pred             ccEEeeCCCc
Q 044670          236 GLNLVVDGGF  245 (302)
Q Consensus       236 G~~~~~~gG~  245 (302)
                      |++|.+|||+
T Consensus       257 G~~i~vdGG~  266 (267)
T 4iiu_A          257 RQVISINGGM  266 (267)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEEeCCCc
Confidence            9999999996

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-45  Score=318.62  Aligned_cols=245  Identities=26%  Similarity=0.362  Sum_probs=210.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CC---CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GE---DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.   ++.++.+|++|+++++++++++.++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999988777665554   23   6899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCC----CCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-CCCh
Q 044670           75 YGKLDIMYNNAGIVDRGFAS----VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSP  149 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~~~~  149 (302)
                      ++++|+||||||....  .+    +.+.+.++|++++++|+.++++++++++|.|.+++ ++||++||.++..+. ++..
T Consensus        84 ~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~  160 (280)
T 1xkq_A           84 FGKIDVLVNNAGAAIP--DAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL  160 (280)
T ss_dssp             HSCCCEEEECCCCCCC--CTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred             cCCCCEEEECCCCCCC--CCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCccc
Confidence            9999999999998653  34    66788999999999999999999999999997655 999999999988887 8899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH---HHHHHHhc--cccCCCCCCHHHHHHHHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI---LEAFLSEM--GNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~dva~~~~  224 (302)
                      .|++||++++.+++.++.|++++||+||+|+||+|+|++..........   ........  ..+.+++.+|+|+|++++
T Consensus       161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~  240 (280)
T 1xkq_A          161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999999986543111110   11122211  123478999999999999


Q ss_pred             HhccCC-CCCccccEEeeCCCcccC
Q 044670          225 YLATDE-ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       225 ~l~s~~-~~~~~G~~~~~~gG~~~~  248 (302)
                      ||+++. ..+++|+++.+|||+.+.
T Consensus       241 ~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          241 FLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhcCcccccCccCCeEEECCCcccc
Confidence            999987 789999999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1e-44  Score=319.79  Aligned_cols=245  Identities=28%  Similarity=0.409  Sum_probs=210.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CC---CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GE---DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~---~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.   ++.++.+|++|+++++++++++.++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999988776665544   33   7899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCC--CCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-CCChhH
Q 044670           75 YGKLDIMYNNAGIVDRGFAS--VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-IGSPAY  151 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-~~~~~Y  151 (302)
                      ++++|+||||||+...  .+  +.+.+.++|++++++|+.++++++++++|.|.+++ ++||++||.++..+. ++...|
T Consensus       104 ~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y  180 (297)
T 1xhl_A          104 FGKIDILVNNAGANLA--DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYY  180 (297)
T ss_dssp             HSCCCEEEECCCCCCC--CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHH
T ss_pred             cCCCCEEEECCCcCcC--CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchH
Confidence            9999999999998654  34  77889999999999999999999999999998766 999999999988887 889999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH---HHHHHHhc--cccCCCCCCHHHHHHHHHHh
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI---LEAFLSEM--GNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++||++++.+++.++.|++++||+||+|+||+|.|++..........   ........  ..+.+++.+|+|+|++++||
T Consensus       181 ~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l  260 (297)
T 1xhl_A          181 ACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFL  260 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999986543211110   11111111  12347899999999999999


Q ss_pred             ccCC-CCCccccEEeeCCCcccC
Q 044670          227 ATDE-ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       227 ~s~~-~~~~~G~~~~~~gG~~~~  248 (302)
                      +++. ..+++|+++.+|||+.+.
T Consensus       261 ~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          261 ADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGGC
T ss_pred             hCCcccCCccCcEEEECCCcccc
Confidence            9987 889999999999998754

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-44  Score=314.29  Aligned_cols=247  Identities=23%  Similarity=0.263  Sum_probs=206.6

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccHHHHH---HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNLGQAL---ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++|++|||||+  +|||++++++|+++|++|++++|+....+.+   .+.. ..+.++.+|++|+++++++++++.+++
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   90 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFASLKTHW   90 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999  9999999999999999999999986543333   2233 457899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCC-CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLD-TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|+||||||+....  ..++.+ .+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.+++..|+
T Consensus        91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  168 (271)
T 3ek2_A           91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMG  168 (271)
T ss_dssp             SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchh
Confidence            9999999999986531  024444 889999999999999999999999999964  68999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||++++.|++.++.|++++||+||+|+||+|.|++.......+.....+... .+ .+++.+|+|+|++++||+++...
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~-~~~~~~pedva~~i~~l~s~~~~  246 (271)
T 3ek2_A          169 LAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESN-SP-LKRNVTIEQVGNAGAFLLSDLAS  246 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHH-ST-TSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhc-CC-cCCCCCHHHHHHHHHHHcCcccC
Confidence            99999999999999999999999999999999999876543223333333333 23 37899999999999999999889


Q ss_pred             CccccEEeeCCCcccCCCCc
Q 044670          233 DVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~~~~~  252 (302)
                      +++|++|.+|||+.+.....
T Consensus       247 ~~tG~~i~vdgG~~~~~~~~  266 (271)
T 3ek2_A          247 GVTAEVMHVDSGFNAVVGGM  266 (271)
T ss_dssp             TCCSEEEEESTTGGGBCCCC
T ss_pred             CeeeeEEEECCCeeeehhhh
Confidence            99999999999998776554

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=1e-43  Score=310.28  Aligned_cols=252  Identities=48%  Similarity=0.777  Sum_probs=219.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+.++.  ++.++.+|++|+++++++++++.++++++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5789999999999999999999999999999999988777666666543  78999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-CChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-~~~~Y~~sK~a  157 (302)
                      |+||||||.......++.+.+.++|++++++|+.+++++++++++.|.+++.++||++||..+..+.+ +...|++||++
T Consensus        94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a  173 (278)
T 2bgk_A           94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA  173 (278)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred             CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHH
Confidence            99999999865333467788899999999999999999999999999887789999999999988877 78899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.+++.++.|++++||++++|+||+++|++...... .+.....+....+.+.+++.+|+|+|+++++++++...+++|
T Consensus       174 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  253 (278)
T 2bgk_A          174 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG  253 (278)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCcccccCCC
Confidence            9999999999999999999999999999998765432 234444444443334477999999999999999987888999


Q ss_pred             cEEeeCCCcccCCCCc
Q 044670          237 LNLVVDGGFSVANPSL  252 (302)
Q Consensus       237 ~~~~~~gG~~~~~~~~  252 (302)
                      +++.+|||..+..+++
T Consensus       254 ~~~~v~gg~~~~~~e~  269 (278)
T 2bgk_A          254 LNLVIDGGYTRTNPAF  269 (278)
T ss_dssp             CEEEESTTGGGCCTHH
T ss_pred             CEEEECCcccccCCcc
Confidence            9999999988765543

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=2.9e-44  Score=314.86  Aligned_cols=242  Identities=26%  Similarity=0.426  Sum_probs=205.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+. .+.+.+   ..+.++.++.+|++|+++++++++++.+.++
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999998754 333322   2356789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC-ChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG-SPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~-~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.|++++++++++.|  ++.++||++||.++..+.++ ...|++||
T Consensus       107 ~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~~~~~~~~~Y~asK  182 (283)
T 1g0o_A          107 KLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITGQAKAVPKHAVYSGSK  182 (283)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             CCCEEEECCCcCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhhccCCCCCCcchHHHH
Confidence            99999999998754  467788999999999999999999999999999  35689999999988877664 88999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      ++++.+++.++.|++++||+||+|+||+|.|++.....         ..++....+......+.+++.+|+|+|++++||
T Consensus       183 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l  262 (283)
T 1g0o_A          183 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL  262 (283)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999754210         022333333221022347899999999999999


Q ss_pred             ccCCCCCccccEEeeCCCcc
Q 044670          227 ATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++...+++|+++.+|||+.
T Consensus       263 ~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          263 ASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             HSGGGTTCCSCEEEESTTCC
T ss_pred             hCccccCcCCCEEEeCCCcc
Confidence            99888899999999999964

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-44  Score=314.81  Aligned_cols=242  Identities=31%  Similarity=0.499  Sum_probs=208.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++..+.+.+++. .+.++.+|++|+++++++++++.++++++|+
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   85 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDC   85 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999999888777766653 4788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||.... ..++.+.+.++|++++++|+.++++++++++|+|.++ .++||++||..+..+.++...|++||++++.
T Consensus        86 lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  163 (270)
T 1yde_A           86 VVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA  163 (270)
T ss_dssp             EEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHH
Confidence            9999998642 1467778999999999999999999999999998654 5899999999988888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCH-HHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INP-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++.|++++||+||+|+||+++|++.....   ... ........  ..+.+++.+|+|+|++++||+++ .++++|
T Consensus       164 ~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--~~p~~r~~~p~dva~~v~~L~s~-~~~itG  240 (270)
T 1yde_A          164 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML--AQPLGRMGQPAEVGAAAVFLASE-ANFCTG  240 (270)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH--TSTTSSCBCHHHHHHHHHHHHHH-CTTCCS
T ss_pred             HHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhh--cCCCCCCcCHHHHHHHHHHHccc-CCCcCC
Confidence            999999999999999999999999999754211   111 11111111  22348899999999999999997 689999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +.+.+|||+.+.
T Consensus       241 ~~i~vdGG~~~~  252 (270)
T 1yde_A          241 IELLVTGGAELG  252 (270)
T ss_dssp             CEEEESTTTTSC
T ss_pred             CEEEECCCeecc
Confidence            999999997654

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.9e-44  Score=311.35  Aligned_cols=243  Identities=24%  Similarity=0.289  Sum_probs=207.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||+  +|||++++++|+++|++|++++|+.+   ..+++.+..+ .+.++.+|++|+++++++++++.+++
T Consensus         6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG-GALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            578999999999  99999999999999999999999875   3333333333 47889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +++|+||||||.....  ..++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|++
T Consensus        85 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  162 (261)
T 2wyu_A           85 GGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAI  162 (261)
T ss_dssp             SSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHH
Confidence            9999999999976420  135667889999999999999999999999999864  489999999999988899999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+||+|+||+|+|++.......+.....+... . +.+++.+|+|+|+++++++++...+
T Consensus       163 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~-p~~~~~~~~dva~~v~~l~s~~~~~  240 (261)
T 2wyu_A          163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQT-A-PLRRNITQEEVGNLGLFLLSPLASG  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHH-S-TTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHcChhhcC
Confidence            9999999999999999999999999999999999865432223333333333 2 3378999999999999999988889


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      ++|+.+.+|||+.+.
T Consensus       241 ~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          241 ITGEVVYVDAGYHIM  255 (261)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCCEEEECCCcccc
Confidence            999999999998754

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=1.6e-44  Score=311.47  Aligned_cols=241  Identities=27%  Similarity=0.368  Sum_probs=208.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|+++ .|+.+..++...++   +.++.++.+|++|.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            579999999999999999999999999999886 56666665554443   56788999999999999999999987764


Q ss_pred             ------CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChh
Q 044670           77 ------KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPA  150 (302)
Q Consensus        77 ------~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~  150 (302)
                            ++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|.|.  +.++||++||.++..+.++...
T Consensus        85 ~~~~~~~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~~~~~~~~~~~  160 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPG--AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAATRISLPDFIA  160 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGGGTSCCTTBHH
T ss_pred             ccccCCcccEEEECCCCCCC--CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChhhccCCCCcch
Confidence                  49999999998754  5777889999999999999999999999999984  3579999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++||++++.+++.++.|++++||+||+|+||++.|++.......+.. ........+ .+++.+|+|+|++++||+++.
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~dva~~~~~l~s~~  238 (255)
T 3icc_A          161 YSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMM-KQYATTISA-FNRLGEVEDIADTAAFLASPD  238 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHH-HHHHHHTST-TSSCBCHHHHHHHHHHHHSGG
T ss_pred             hHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHH-HHhhhccCC-cCCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999998776544333 333333333 388999999999999999998


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++|+++.+|||+.+
T Consensus       239 ~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          239 SRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             GTTCCSCEEEESSSTTC
T ss_pred             cCCccCCEEEecCCeeC
Confidence            99999999999999753

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.2e-44  Score=314.22  Aligned_cols=241  Identities=27%  Similarity=0.427  Sum_probs=212.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++ ++++++|+
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~~~id~  106 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-NQLGRLRY  106 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-TTSSEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-HHhCCCCe
Confidence            47899999999999999999999999999999999999988888888888999999999999999999999 88899999


Q ss_pred             EEEc-ccCCCCCCCCC-----CCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc------CCCCEEEEEcCcccccCCCCC
Q 044670           81 MYNN-AGIVDRGFASV-----LDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP------QHKGCILFTASACTEIAGIGS  148 (302)
Q Consensus        81 lv~~-Ag~~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~iv~~sS~~~~~~~~~~  148 (302)
                      +||| ||....  .++     .+.+.++|++++++|+.+++++++.+++.|.+      ++.++||++||.++..+.++.
T Consensus       107 lv~~aag~~~~--~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  184 (281)
T 3ppi_A          107 AVVAHGGFGVA--QRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQ  184 (281)
T ss_dssp             EEECCCCCCCC--CCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTC
T ss_pred             EEEccCccccc--ccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCC
Confidence            9999 554332  222     35788999999999999999999999999976      457899999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||+|++.+++.++.|++++||+||+|+||+|.|++....  .++....+....+. .+++.+|+|+|+++++|++
T Consensus       185 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~-~~~~~~pedvA~~v~~l~s  261 (281)
T 3ppi_A          185 TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPF-PKRLGTPDEFADAAAFLLT  261 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCS-SSSCBCHHHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999987654  34444444444332 2779999999999999997


Q ss_pred             CCCCCccccEEeeCCCcccCC
Q 044670          229 DEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~~  249 (302)
                      +  .+++|+++.+|||+.+.+
T Consensus       262 ~--~~~tG~~i~vdGG~~~~p  280 (281)
T 3ppi_A          262 N--GYINGEVMRLDGAQRFTP  280 (281)
T ss_dssp             C--SSCCSCEEEESTTCCCCC
T ss_pred             C--CCcCCcEEEECCCcccCC
Confidence            4  689999999999987654

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=8.8e-45  Score=316.75  Aligned_cols=231  Identities=28%  Similarity=0.327  Sum_probs=199.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-------HHHHHH---HhCCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-------GQALAC---KLGEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.       .++..+   ..+.++.++.+|++|++++++++++
T Consensus         4 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            4 LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            589999999999999999999999999999999998653       333332   3367889999999999999999999


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--CCCC
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGS  148 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~  148 (302)
                      +.+++|++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.++||++||.++..+  .++.
T Consensus        84 ~~~~~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~  161 (274)
T 3e03_A           84 TVDTFGGIDILVNNASAIWL--RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAH  161 (274)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHC
T ss_pred             HHHHcCCCCEEEECCCcccC--CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCC
Confidence            99999999999999998764  5778889999999999999999999999999998888899999999988877  5778


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCC-cccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPY-GLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ..|++||++++.|++.++.|++++||+||+|+|| .+.|++.....           .  .+..++.+|+|+|++++||+
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~--~~~~~~~~pedvA~~v~~l~  228 (274)
T 3e03_A          162 TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------G--VDAAACRRPEIMADAAHAVL  228 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------C--CCGGGSBCTHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------c--ccccccCCHHHHHHHHHHHh
Confidence            8999999999999999999999999999999999 68888763211           1  11144789999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++...++||+++ +|||...
T Consensus       229 s~~~~~itG~~i-~~~g~~~  247 (274)
T 3e03_A          229 TREAAGFHGQFL-IDDEVLA  247 (274)
T ss_dssp             TSCCTTCCSCEE-EHHHHHH
T ss_pred             CccccccCCeEE-EcCcchh
Confidence            999999999999 7777664

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=2.5e-44  Score=310.15  Aligned_cols=232  Identities=21%  Similarity=0.284  Sum_probs=191.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.++ ++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~   83 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-AP   83 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CC
Confidence            47999999999999999999999999999999999998877766655   567899999999999999999999999 99


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++
T Consensus        84 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  161 (252)
T 3h7a_A           84 LEVTIFNVGANVN--FPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFG  161 (252)
T ss_dssp             EEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHH
T ss_pred             ceEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHH
Confidence            9999999998764  57888999999999999999999999999999988778999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEE-EEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRV-NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v-~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.|++.++.|++++||+| |+|+||+|.|++.....  +......... .+ .+ +.+|+|+|++++||++++.+.++|
T Consensus       162 ~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~--~~~~~~~~~~-~~-~~-~~~pedvA~~~~~l~s~~~~~~~~  236 (252)
T 3h7a_A          162 LRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERR--EQMFGKDALA-NP-DL-LMPPAAVAGAYWQLYQQPKSAWTF  236 (252)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEEC--------------------------------CCHHHHHHHHHHHHHCCGGGBCS
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccc--hhhhhhhhhc-CC-cc-CCCHHHHHHHHHHHHhCchhccee
Confidence            9999999999999999999 99999999999886542  2222222221 12 24 899999999999999988888888


Q ss_pred             cEEe
Q 044670          237 LNLV  240 (302)
Q Consensus       237 ~~~~  240 (302)
                      ++..
T Consensus       237 ~i~~  240 (252)
T 3h7a_A          237 EMEI  240 (252)
T ss_dssp             EEEE
T ss_pred             eEEe
Confidence            8754

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=1.7e-44  Score=313.56  Aligned_cols=243  Identities=21%  Similarity=0.252  Sum_probs=209.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.+|++|||||++|||++++++|+++|++|++++|+.+..++..   ...+.++.+|++|+++++++++++.+.+|++|+
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   90 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN---LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA   90 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC---CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh---cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCE
Confidence            36899999999999999999999999999999999877654432   246889999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++.|+||++||.++..+.++...|++||++++.
T Consensus        91 lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~  168 (266)
T 3p19_A           91 IVNNAGMMLL--GQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHA  168 (266)
T ss_dssp             EEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHH
Confidence            9999998764  57888899999999999999999999999999988788999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++..... .......+.... .+.+++++|+|+|++++|+++.+.....++++.
T Consensus       169 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~-~~~~r~~~pedvA~av~~l~~~~~~~~~~~i~i  246 (266)
T 3p19_A          169 ISENVREEVAASNVRVMTIAPSAVKTELLSHTT-SQQIKDGYDAWR-VDMGGVLAADDVARAVLFAYQQPQNVCIREIAL  246 (266)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCS-CHHHHHHHHHHH-HHTTCCBCHHHHHHHHHHHHHSCTTEEEEEEEE
T ss_pred             HHHHHHHHhcccCcEEEEEeeCccccchhhccc-chhhhHHHHhhc-ccccCCCCHHHHHHHHHHHHcCCCCccceeeEE
Confidence            999999999999999999999999999986553 222222222211 234889999999999999999888888898888


Q ss_pred             eCCCcccCCC
Q 044670          241 VDGGFSVANP  250 (302)
Q Consensus       241 ~~gG~~~~~~  250 (302)
                      ...+.....+
T Consensus       247 ~p~~~~~~~~  256 (266)
T 3p19_A          247 APTKQQPKLA  256 (266)
T ss_dssp             EETTCCC---
T ss_pred             ecCCCCCccc
Confidence            7777654433

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=9e-45  Score=312.03  Aligned_cols=233  Identities=24%  Similarity=0.376  Sum_probs=196.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++        +..+.+|++|+++++++++++.++++++|+
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   84 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG--------LFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   84 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT--------SEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH--------hcCeeccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            578999999999999999999999999999999998765332        224889999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        85 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  162 (247)
T 1uzm_A           85 LVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIG  162 (247)
T ss_dssp             EEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHH
Confidence            9999998754  46778899999999999999999999999999987778999999999999888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||++.|++....  .+.....+... . +.+++.+|+|+|+++++++++...+++|+++.
T Consensus       163 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~-~-p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~  238 (247)
T 1uzm_A          163 MARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQF-I-PAKRVGTPAEVAGVVSFLASEDASYISGAVIP  238 (247)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGG-C-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHcCccccCCcCCEEE
Confidence            99999999999999999999999999986532  22222222222 2 33779999999999999999888899999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       239 vdgG~~~  245 (247)
T 1uzm_A          239 VDGGMGM  245 (247)
T ss_dssp             ESTTTTC
T ss_pred             ECCCccc
Confidence            9999753

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-44  Score=310.53  Aligned_cols=236  Identities=33%  Similarity=0.488  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.++.+++. .+ .++.++.+|++|+++++    ++.++++++|+
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~----~~~~~~~~id~   77 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY-PGIQTRVLDVTKKKQID----QFANEVERLDV   77 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS-TTEEEEECCTTCHHHHH----HHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc-cCceEEEeeCCCHHHHH----HHHHHhCCCCE
Confidence            57999999999999999999999999999999999887665544 33 26889999999999977    45556789999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-CChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.+ +...|++||++++
T Consensus        78 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~  155 (246)
T 2ag5_A           78 LFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVI  155 (246)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHH
T ss_pred             EEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHH
Confidence            9999998654  467788999999999999999999999999999877789999999999888877 8899999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---C-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---I-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      .+++.++.|++++||+||+|+||+++|++.....   . .+.....+... . +.+++.+|+|+|++++||+++...+++
T Consensus       156 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dvA~~v~~l~s~~~~~~t  233 (246)
T 2ag5_A          156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR-Q-KTGRFATAEEIAMLCVYLASDESAYVT  233 (246)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT-C-TTSSCEEHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHhCccccCCC
Confidence            9999999999999999999999999999754310   0 12222233322 2 337899999999999999999888999


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |+.+.+|||+.
T Consensus       234 G~~i~vdgG~~  244 (246)
T 2ag5_A          234 GNPVIIDGGWS  244 (246)
T ss_dssp             SCEEEECTTGG
T ss_pred             CCEEEECCCcc
Confidence            99999999975

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=5.1e-44  Score=310.42  Aligned_cols=243  Identities=21%  Similarity=0.271  Sum_probs=205.0

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|+..   ..+++.+..+ ...++.+|++|+++++++++++.+++
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG-SDIVLQCDVAEDASIDTMFAELGKVW   85 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC-CcEEEEccCCCHHHHHHHHHHHHHHc
Confidence            468999999999  99999999999999999999999872   2333333333 34788999999999999999999999


Q ss_pred             CCccEEEEcccCCCCC--CCCCCC-CCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRG--FASVLD-TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|+||||||+....  ..++.+ .+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.+++..|+
T Consensus        86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  163 (265)
T 1qsg_A           86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMG  163 (265)
T ss_dssp             SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHH
T ss_pred             CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHH
Confidence            9999999999976420  134556 788999999999999999999999999964  58999999999998888999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||++++.+++.++.|++++||+||+|+||+|+|++.......+.....+... . +.+++.+|+|+|+++++++++...
T Consensus       164 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~-p~~~~~~~~dva~~v~~l~s~~~~  241 (265)
T 1qsg_A          164 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAV-T-PIRRTVTIEDVGNSAAFLCSDLSA  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHH-S-TTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999875432222333333332 2 337799999999999999998888


Q ss_pred             CccccEEeeCCCcccC
Q 044670          233 DVTGLNLVVDGGFSVA  248 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~  248 (302)
                      +++|+.+.+|||+.+.
T Consensus       242 ~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          242 GISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CccCCEEEECCCcCCC
Confidence            9999999999998754

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=9.8e-44  Score=305.64  Aligned_cols=241  Identities=30%  Similarity=0.469  Sum_probs=210.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|++|||||+||||++++++|+++|++|++++|+.+..+++.+.+    +.++.++.+|++|+++++++++++.+++++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3789999999999999999999999999999999988777666554    456899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCC---CCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           78 LDIMYNNAGIVDRGFAS---VLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      +|+||||||....  .+   +.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++|
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  158 (250)
T 2cfc_A           81 IDVLVNNAGITGN--SEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTS  158 (250)
T ss_dssp             CCEEEECCCCCCC--TTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHH
Confidence            9999999998653  23   667789999999999999999999999999987778999999999999888999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.|+.++||++++|+||+++|++.......+.....+...  .+.+++.+|+|+|++++++++++..++
T Consensus       159 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~  236 (250)
T 2cfc_A          159 KGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLAR--IPQKEIGTAAQVADAVMFLAGEDATYV  236 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTT--CTTCSCBCHHHHHHHHHHHHSTTCTTC
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCchhhcc
Confidence            999999999999999999999999999999999865311123333333222  233778999999999999999888899


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|+++.+|||+.
T Consensus       237 ~G~~~~v~gG~~  248 (250)
T 2cfc_A          237 NGAALVMDGAYT  248 (250)
T ss_dssp             CSCEEEESTTGG
T ss_pred             cCCEEEECCcee
Confidence            999999999975

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1e-44  Score=312.65  Aligned_cols=233  Identities=26%  Similarity=0.428  Sum_probs=197.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+        .+.++.+|++|+++++++++++.++++++|+
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~   90 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE--------GFLAVKCDITDTEQVEQAYKEIEETHGPVEV   90 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc--------cceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999876432        2678999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        91 lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  168 (253)
T 2nm0_A           91 LIANAGVTKD--QLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVG  168 (253)
T ss_dssp             EEEECSCCTT--TC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence            9999998654  46777888999999999999999999999999987778999999999988877778899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++....  .+.....+...  .+.+++.+|+|+|++++++++++..+++|+.+.
T Consensus       169 ~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~--~p~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~  244 (253)
T 2nm0_A          169 FARSLARELGSRNITFNVVAPGFVDTDMTKVL--TDEQRANIVSQ--VPLGRYARPEEIAATVRFLASDDASYITGAVIP  244 (253)
T ss_dssp             HHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTT--CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCccccCCcCcEEE
Confidence            99999999999999999999999999986532  11222222222  233779999999999999999888899999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+.+
T Consensus       245 vdGG~~~  251 (253)
T 2nm0_A          245 VDGGLGM  251 (253)
T ss_dssp             ESTTTTC
T ss_pred             ECCcccc
Confidence            9999754

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=3.2e-44  Score=312.38  Aligned_cols=242  Identities=22%  Similarity=0.262  Sum_probs=205.8

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-   76 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   76 (302)
                      |+||++|||||  ++|||++++++|+++|++|++++|+.+. .+++.+.++.++.++.+|++|+++++++++++.+++| 
T Consensus         5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (269)
T 2h7i_A            5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   84 (269)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999  9999999999999999999999998765 3556555566788999999999999999999999999 


Q ss_pred             --CccEEEEcccCCCCC---CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           77 --KLDIMYNNAGIVDRG---FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        77 --~id~lv~~Ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                        ++|+||||||+....   ..++.+.+.++|++++++|+.++++++++++|+|.+  .++||++||... .+.+++..|
T Consensus        85 ~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~~Y  161 (269)
T 2h7i_A           85 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYNWM  161 (269)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTHHH
T ss_pred             CCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchHHH
Confidence              999999999986521   246778899999999999999999999999999965  479999999876 667788999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHH-------HHHHHHhccccCC-CCCCHHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAI-------LEAFLSEMGNLRG-QVLNAEGIA  220 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~-------~~~~~~~~~~~~~-~~~~~~dva  220 (302)
                      ++||++++.+++.++.|++++||+||+|+||+|.|++.....   ..+..       .+.+... .+ .+ ++.+|+|+|
T Consensus       162 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~rr~~~p~dvA  239 (269)
T 2h7i_A          162 TVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR-AP-IGWNMKDATPVA  239 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH-CT-TCCCTTCCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc-CC-cccCCCCHHHHH
Confidence            999999999999999999999999999999999999754210   11211       1112222 23 36 699999999


Q ss_pred             HHHHHhccCCCCCccccEEeeCCCccc
Q 044670          221 NAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       221 ~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++++||+++.+.++||+.+.+|||+.+
T Consensus       240 ~~v~~L~s~~~~~itG~~i~vdGG~~~  266 (269)
T 2h7i_A          240 KTVCALLSDWLPATTGDIIYADGGAHT  266 (269)
T ss_dssp             HHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred             HHHHHHhCchhccCcceEEEecCCeee
Confidence            999999999999999999999999764

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=1.1e-44  Score=312.12  Aligned_cols=233  Identities=19%  Similarity=0.284  Sum_probs=198.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----C-CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----G-EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..+++     + .++.++.+|++|+++++++++++.++
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999988877766554     2 57889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+...  .++ +.+.++|++++++|+.++++++++++|.|.+++.++||++||.++..+.++...|++|
T Consensus        85 ~g~iD~lvnnAg~~~~--~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  161 (250)
T 3nyw_A           85 YGAVDILVNAAAMFMD--GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGST  161 (250)
T ss_dssp             HCCEEEEEECCCCCCC--CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHH
T ss_pred             cCCCCEEEECCCcCCC--CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHH
Confidence            9999999999998764  355 6788999999999999999999999999988778999999999999877778999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC-CCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE-ASD  233 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~-~~~  233 (302)
                      |++++.|++.++.|++++||+||+|+||+|.|++......            ..+.+++.+|+|+|++++||++++ ...
T Consensus       162 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~------------~~~~~~~~~p~dva~~v~~l~s~~~~~~  229 (250)
T 3nyw_A          162 KFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAGT------------PFKDEEMIQPDDLLNTIRCLLNLSENVC  229 (250)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTTC------------CSCGGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcCC------------CcccccCCCHHHHHHHHHHHHcCCCceE
Confidence            9999999999999999999999999999999987643211            112266889999999999999854 446


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      +++..+.+|||....
T Consensus       230 ~~~~~i~vd~~~~~~  244 (250)
T 3nyw_A          230 IKDIVFEMKKSIIEG  244 (250)
T ss_dssp             CCEEEEEEHHHHHC-
T ss_pred             eeEEEEEeecccccc
Confidence            778889999997654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=6.4e-44  Score=310.85  Aligned_cols=237  Identities=24%  Similarity=0.298  Sum_probs=193.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46899999999999999999999999999999999999988888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      ||||||+... ..++.+.+.++|++++++|+.|+++++++++|.|.+++  .|+||++||.++..+.++...|++||+++
T Consensus       106 lVnnAg~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~  184 (272)
T 4dyv_A          106 LFNNAGTGAP-AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI  184 (272)
T ss_dssp             EEECCCCCCC-SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred             EEECCCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence            9999998643 14778889999999999999999999999999998765  68999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      +.|++.++.|++++||+||+|+||+|.|++........   ......  .+.+++.+|+|+|++++||++.+.....++.
T Consensus       185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~--~~~~~~~~pedvA~~v~fL~s~~~~~~~~~i  259 (272)
T 4dyv_A          185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV---PQADLS--IKVEPVMDVAHVASAVVYMASLPLDANVQFM  259 (272)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------CHHHHHHHHHHHHHSCTTSCCCEE
T ss_pred             HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc---hhhhhc--ccccCCCCHHHHHHHHHHHhCCCCcCccceE
Confidence            99999999999999999999999999999876542111   111111  1226789999999999999997655444444


Q ss_pred             EeeCC
Q 044670          239 LVVDG  243 (302)
Q Consensus       239 ~~~~g  243 (302)
                      .....
T Consensus       260 ~i~~~  264 (272)
T 4dyv_A          260 TIMAT  264 (272)
T ss_dssp             EEEEC
T ss_pred             EEecc
Confidence            43333

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=9.3e-44  Score=309.92  Aligned_cols=240  Identities=30%  Similarity=0.393  Sum_probs=198.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++|++|||||++|||++++++|+++|++|+++ .|+.+..+.+.+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999999887 66666666554443   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC---CCCEEEEEcCcccccCCC-CChhHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ---HKGCILFTASACTEIAGI-GSPAYTV  153 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~~sS~~~~~~~~-~~~~Y~~  153 (302)
                      +|+||||||+.... .++.+.+.++|++++++|+.|++++++.++|.|.+.   +.++||++||.++..+.+ ++..|++
T Consensus       105 id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          105 LDGLVNNAGIVDYP-QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            99999999986531 467788999999999999999999999999999762   468999999999888766 6788999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||++++.+++.++.|++++||+|++|+||+|+|++..... .+.........  .+.+++.+|+|+|+++++++++...+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~--~~~~~~~~~edvA~~i~~l~s~~~~~  260 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPS--VPMQRAGMPEEVADAILYLLSPSASY  260 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------C--CTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhc--CCcCCCcCHHHHHHHHHHHhCCcccc
Confidence            9999999999999999999999999999999999876422 22222222222  23377899999999999999988899


Q ss_pred             ccccEEeeCCCc
Q 044670          234 VTGLNLVVDGGF  245 (302)
Q Consensus       234 ~~G~~~~~~gG~  245 (302)
                      ++|++|++|||+
T Consensus       261 ~tG~~i~vdgG~  272 (272)
T 4e3z_A          261 VTGSILNVSGGR  272 (272)
T ss_dssp             CCSCEEEESTTC
T ss_pred             ccCCEEeecCCC
Confidence            999999999994

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1e-43  Score=306.16  Aligned_cols=241  Identities=32%  Similarity=0.459  Sum_probs=211.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCe-EEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDV-CYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+.+.+.++.++ .++.+|++|+++++++++++.+ ++++|
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~id   87 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA-VAPVS   87 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH-HSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh-hCCCc
Confidence            578999999999999999999999999999999999888777766666667 8899999999999999999988 89999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC--hhHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSKYG  157 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--~~Y~~sK~a  157 (302)
                      +||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||..+..+.++.  ..|++||++
T Consensus        88 ~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a  165 (254)
T 2wsb_A           88 ILVNSAGIARL--HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGA  165 (254)
T ss_dssp             EEEECCCCCCC--BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHH
T ss_pred             EEEECCccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHH
Confidence            99999998754  46778889999999999999999999999999987778999999999988877777  899999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|+.++||++++|+||+++|++.......+.....+....  +.+++.+|+|+|+++++++++...+++|+
T Consensus       166 ~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G~  243 (254)
T 2wsb_A          166 VHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMT--PMGRCGEPSEIAAAALFLASPAASYVTGA  243 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTS--TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhCcccccccCC
Confidence            9999999999999999999999999999998653222233333333322  23779999999999999999878889999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      ++.+|||+.
T Consensus       244 ~~~v~gG~~  252 (254)
T 2wsb_A          244 ILAVDGGYT  252 (254)
T ss_dssp             EEEESTTGG
T ss_pred             EEEECCCEe
Confidence            999999975

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-44  Score=303.50  Aligned_cols=223  Identities=22%  Similarity=0.248  Sum_probs=190.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+.++.++.++.+|++|+++++++++++.++++++|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            68999999999999999999999999999999999998888887777667899999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.|+++++++++|.|.+++ ++||++||.++..+.++...|++||+++++
T Consensus        81 lvnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           81 VLHCAGTGEF--GPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             EEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            9999998654  5778889999999999999999999999999997664 599999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc-CCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT-DEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~~  239 (302)
                      |++.++.|++++||+||+|+||+|.|++......             .+.+++.+|+|+|++++++++ +...+++|-.+
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~  224 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-------------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFI  224 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-------------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEE
Confidence            9999999999999999999999999998654311             011468899999999999998 45556666544

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1.5e-43  Score=306.41  Aligned_cols=244  Identities=33%  Similarity=0.491  Sum_probs=210.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||++|||++++++|+++|++|++++| +.+..+++.+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999 666655554443   45788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.++...|++||
T Consensus        85 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (261)
T 1gee_A           85 KLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHH
Confidence            99999999998653  4667788999999999999999999999999998766 78999999999998889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||++++|+||+++|++.......+.....+... . +.+++.+|+|+|+++++++++...+++
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~~~~~~~~  240 (261)
T 1gee_A          163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM-I-PMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCccccCCC
Confidence            99999999999999999999999999999999864321112222222222 2 337789999999999999998788999


Q ss_pred             ccEEeeCCCcccC
Q 044670          236 GLNLVVDGGFSVA  248 (302)
Q Consensus       236 G~~~~~~gG~~~~  248 (302)
                      |+++.+|||..+.
T Consensus       241 G~~~~v~gg~~~~  253 (261)
T 1gee_A          241 GITLFADGGMTLY  253 (261)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEEcCCcccC
Confidence            9999999998753

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=4e-43  Score=303.51  Aligned_cols=243  Identities=30%  Similarity=0.466  Sum_probs=210.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+   +.++.++.+|++|+++++++++++.+++++
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999999999987766554443   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC--hhHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSK  155 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--~~Y~~sK  155 (302)
                      +|+||||||.... ..++.+.+.++|++.+++|+.+++++++++.+.|.+++.++||++||..+..+.++.  ..|++||
T Consensus        91 id~vi~~Ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK  169 (260)
T 3awd_A           91 VDILVACAGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASK  169 (260)
T ss_dssp             CCEEEECCCCCCC-SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred             CCEEEECCCCCCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHH
Confidence            9999999997651 146778889999999999999999999999999987678999999999888777776  8999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.+++.++.|++++||++++|+||+++|++.......+.....+....  +.+++.+|+|+|+++++++++...+++
T Consensus       170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~  247 (260)
T 3awd_A          170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT--PMGRVGQPDEVASVVQFLASDAASLMT  247 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTC--TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcC--CcCCCCCHHHHHHHHHHHhCchhccCC
Confidence            999999999999999999999999999999998752111233434443332  237799999999999999998778899


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |+.+++|||+.
T Consensus       248 G~~~~v~gg~~  258 (260)
T 3awd_A          248 GAIVNVDAGFT  258 (260)
T ss_dssp             SCEEEESTTTT
T ss_pred             CcEEEECCcee
Confidence            99999999965

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=3.6e-43  Score=302.32  Aligned_cols=242  Identities=32%  Similarity=0.443  Sum_probs=211.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+...+.+.  .++.++.+|++|+++++++++++.+.++++
T Consensus         4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999999999999887777666654  578999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC-CEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |+||||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++. ++||++||..+..+.++...|++||++
T Consensus        84 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  161 (251)
T 1zk4_A           84 STLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA  161 (251)
T ss_dssp             CEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCC--CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHH
Confidence            999999998654  46778899999999999999999999999999987766 899999999999888999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          158 IIALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       158 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++.+++.++.|+.  ++||++++|+||+++|++.....  .......... ..+.+++.+|+|+|+++++++++...+++
T Consensus       162 ~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T 1zk4_A          162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP--GAEEAMSQRT-KTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST--THHHHHTSTT-TCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcC--chhhhHHHhh-cCCCCCCcCHHHHHHHHHHHcCccccccc
Confidence            9999999999987  88999999999999999876431  1111111111 12337789999999999999998888899


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+.+.+|||+..
T Consensus       239 G~~~~v~gG~~~  250 (251)
T 1zk4_A          239 GSEFVVDGGYTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCccC
Confidence            999999999763

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=5.1e-43  Score=301.08  Aligned_cols=231  Identities=28%  Similarity=0.392  Sum_probs=201.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+.+.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999988777665554   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++ |+||++||.++..+.++...|++||++
T Consensus        85 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           85 LDILVNNAGIMLL--GPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             CSEEEECCCCCCC--CCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            9999999998754  5778889999999999999999999999999997766 999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCC--CCHHHHHHHHHHhccCCCCCcc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQV--LNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++.|++.++.|++++||+||+|+||++.|++..... .+. ........+   +++  .+|+|+|++++|++++...+++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~-~~~~~~~~~---~~~~~~~pedvA~~v~~l~s~~~~~~~  236 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-HTA-TKEMYEQRI---SQIRKLQAQDIAEAVRYAVTAPHHATV  236 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-CHH-HHHHHHHHT---TTSCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-chh-hHHHHHhcc---cccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            999999999999999999999999999999875432 222 222222221   344  8999999999999998877777


Q ss_pred             ccEE
Q 044670          236 GLNL  239 (302)
Q Consensus       236 G~~~  239 (302)
                      ++..
T Consensus       237 ~~i~  240 (247)
T 2jah_A          237 HEIF  240 (247)
T ss_dssp             EEEE
T ss_pred             ceEE
Confidence            7653

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=4e-44  Score=319.57  Aligned_cols=239  Identities=30%  Similarity=0.475  Sum_probs=207.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC----------ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----------DNLGQALACKL---GEDVCYIHCDVTSEDEITNL   67 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----------~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~   67 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+          .+..+.+.+++   +.++.++.+|++|+++++++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            579999999999999999999999999999999987          55555555443   56788999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC------CCEEEEEcCccc
Q 044670           68 VDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH------KGCILFTASACT  141 (302)
Q Consensus        68 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~iv~~sS~~~  141 (302)
                      ++++.+++|++|+||||||+...  .++.+.+.++|++++++|+.|++++++++.+.|.+.+      .|+||++||.++
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~  182 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVRD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG  182 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH
Confidence            99999999999999999998765  5778899999999999999999999999999986422      379999999999


Q ss_pred             ccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHH
Q 044670          142 EIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN  221 (302)
Q Consensus       142 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  221 (302)
                      ..+.++...|++||++++.|++.++.|++++||+||+|+|| +.|++........  ...     +....++.+|+|+|+
T Consensus       183 ~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~--~~~-----~~~~~~~~~pedva~  254 (322)
T 3qlj_A          183 LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEM--MAT-----QDQDFDAMAPENVSP  254 (322)
T ss_dssp             HHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC---------------CCTTCGGGTHH
T ss_pred             ccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhh--hhc-----cccccCCCCHHHHHH
Confidence            99999999999999999999999999999999999999999 9999876543221  111     111134679999999


Q ss_pred             HHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          222 AALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       222 ~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                      +++||+++...+++|++|.+|||.....
T Consensus       255 ~v~~L~s~~~~~itG~~i~vdGG~~~~~  282 (322)
T 3qlj_A          255 LVVWLGSAEARDVTGKVFEVEGGKIRVA  282 (322)
T ss_dssp             HHHHHTSGGGGGCCSCEEEEETTEEEEE
T ss_pred             HHHHHhCccccCCCCCEEEECCCccccC
Confidence            9999999999999999999999987643

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=7.9e-43  Score=302.53  Aligned_cols=241  Identities=29%  Similarity=0.405  Sum_probs=205.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..++++.++.++.+|++|+++++++++++.++++++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            57899999999999999999999999999999999998888877777778999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCC------CCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEcCcccccCCCCC
Q 044670           81 MYNNAGIVDRGFASVL------DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTASACTEIAGIGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~sS~~~~~~~~~~  148 (302)
                      ||||||....  .+..      +.+.++|++++++|+.+++++++++.+.|.++      +.++||++||..+..+.++.
T Consensus        90 li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~  167 (265)
T 2o23_A           90 AVNCAGIAVA--SKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQ  167 (265)
T ss_dssp             EEECCCCCCC--CCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTC
T ss_pred             EEECCccCCC--CccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCC
Confidence            9999998653  2222      36889999999999999999999999999876      67899999999999888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||++++.+++.++.|++++||+||+|+||++.|++....  .+.....+... .+..+++.+|+|+|++++++++
T Consensus       168 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~dva~~~~~l~~  244 (265)
T 2o23_A          168 AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQ-VPFPSRLGDPAEYAHLVQAIIE  244 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHT-CSSSCSCBCHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc--CHHHHHHHHHc-CCCcCCCCCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999987542  11121222222 2222678999999999999995


Q ss_pred             CCCCCccccEEeeCCCcccC
Q 044670          229 DEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~  248 (302)
                        ..+++|+.+.+|||+.+.
T Consensus       245 --~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          245 --NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             --CTTCCSCEEEESTTCCCC
T ss_pred             --cCccCceEEEECCCEecC
Confidence              468999999999998654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-43  Score=307.10  Aligned_cols=240  Identities=27%  Similarity=0.406  Sum_probs=208.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+++..+.+.+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            46899999999999999999999999999999999887776665544   467889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||.++..+.++...|++||++
T Consensus       122 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a  199 (285)
T 2c07_A          122 VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG  199 (285)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHH
Confidence            9999999998754  46778899999999999999999999999999987777999999999998888999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|+.+.||+|++|+||++.|++....  .+.....+... . +.+++.+|+|+|+++++++++...+++|+
T Consensus       200 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~dvA~~~~~l~~~~~~~~~G~  275 (285)
T 2c07_A          200 VIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISN-I-PAGRMGTPEEVANLACFLSSDKSGYINGR  275 (285)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhh-C-CCCCCCCHHHHHHHHHHHhCCCcCCCCCC
Confidence            99999999999999999999999999999987543  23333333322 2 23779999999999999999888889999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||+.
T Consensus       276 ~i~v~gG~~  284 (285)
T 2c07_A          276 VFVIDGGLS  284 (285)
T ss_dssp             EEEESTTSC
T ss_pred             EEEeCCCcc
Confidence            999999964

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.3e-44  Score=308.88  Aligned_cols=232  Identities=26%  Similarity=0.360  Sum_probs=198.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|++|||||++|||++++++|++ .|++|++++|+++..       ...+.++.+|++|+++++++++.+.  ++++|+
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~id~   73 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS-------AENLKFIKADLTKQQDITNVLDIIK--NVSFDG   73 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC-------CTTEEEEECCTTCHHHHHHHHHHTT--TCCEEE
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc-------cccceEEecCcCCHHHHHHHHHHHH--hCCCCE
Confidence            689999999999999999999999 889999999876521       1357899999999999999996554  679999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.++  ++||++||..+..+.++...|++||++++.
T Consensus        74 lv~nAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~  149 (244)
T 4e4y_A           74 IFLNAGILIK--GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQ  149 (244)
T ss_dssp             EEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHH
T ss_pred             EEECCccCCC--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHH
Confidence            9999998765  578889999999999999999999999999999653  899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC--------HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN--------PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      |++.++.|++++||+||+|+||+|.|++.......        ........... .+.+++.+|+|+|++++||+++...
T Consensus       150 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~p~dvA~~v~~l~s~~~~  228 (244)
T 4e4y_A          150 MTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE-FPLNRIAQPQEIAELVIFLLSDKSK  228 (244)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT-STTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc-CCCCCCcCHHHHHHHHHHHhcCccc
Confidence            99999999999999999999999999986432100        00011122222 2348899999999999999999899


Q ss_pred             CccccEEeeCCCccc
Q 044670          233 DVTGLNLVVDGGFSV  247 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~  247 (302)
                      +++|+++.+|||+.+
T Consensus       229 ~itG~~i~vdGG~~~  243 (244)
T 4e4y_A          229 FMTGGLIPIDGGYTA  243 (244)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             cccCCeEeECCCccC
Confidence            999999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.7e-43  Score=305.77  Aligned_cols=243  Identities=25%  Similarity=0.367  Sum_probs=188.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-G   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   76 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+...+.+   +.++.++.+|++|+++++++++++.+.+ +
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999999999987766655443   4578899999999999999999999998 8


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|.+++.++||++||.++..+.++...|++||+
T Consensus        92 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  169 (266)
T 1xq1_A           92 KLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  169 (266)
T ss_dssp             CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCcEEEECCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHH
Confidence            99999999998653  4677789999999999999999999999999998777899999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||++++|+||+++|++..... .+.........  .+.+++.+|+|+|+++++++++...+++|
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~G  246 (266)
T 1xq1_A          170 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISR--KPLGRFGEPEEVSSLVAFLCMPAASYITG  246 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCccccCccC
Confidence            9999999999999999999999999999999875432 12222222222  12367899999999999999988889999


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      +.+.+|||+.+.
T Consensus       247 ~~~~v~gG~~~~  258 (266)
T 1xq1_A          247 QTICVDGGLTVN  258 (266)
T ss_dssp             CEEECCCCEEET
T ss_pred             cEEEEcCCcccc
Confidence            999999998753

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=8.2e-43  Score=302.34  Aligned_cols=231  Identities=28%  Similarity=0.352  Sum_probs=199.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999988877766554   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|.+++.++||++||.++..+.++...|++||++
T Consensus       107 id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  185 (262)
T 3rkr_A          107 CDVLVNNAGVGWF-GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWG  185 (262)
T ss_dssp             CSEEEECCCCCCC-SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHH
Confidence            9999999998432 147778899999999999999999999999999988888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||+|++|+||+|.|++......          .  .+..++++|+|+|++++||+++....++|+
T Consensus       186 ~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~--~~~~~~~~p~dvA~~v~~l~s~~~~~~~g~  253 (262)
T 3rkr_A          186 LNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------K--KSALGAIEPDDIADVVALLATQADQSFISE  253 (262)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCCHHHHHHHHHHHHTCCTTCCEEE
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------c--cccccCCCHHHHHHHHHHHhcCccccccCc
Confidence            9999999999999999999999999999998654211          1  112568899999999999999988899999


Q ss_pred             EEeeCCC
Q 044670          238 NLVVDGG  244 (302)
Q Consensus       238 ~~~~~gG  244 (302)
                      ++..+.+
T Consensus       254 ~~i~p~~  260 (262)
T 3rkr_A          254 VLVRPTL  260 (262)
T ss_dssp             EEEECCC
T ss_pred             EEecccc
Confidence            9988766

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.1e-43  Score=310.93  Aligned_cols=269  Identities=25%  Similarity=0.300  Sum_probs=217.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||+||||++++++|+++|++|++++|+.+..+...+.+    +.++.++.+|++|+++++++++++.+.++
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999987776655544    56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc-cCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI-PQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++++++.|. +++.++||++||..+..+.++...|++||
T Consensus       104 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  181 (302)
T 1w6u_A          104 HPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  181 (302)
T ss_dssp             SCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHH
Confidence            99999999997653  4677788999999999999999999999999997 44578999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc-cCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS-SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      ++++.+++.++.+++++||++++|+||++.|+.. ............+...  .+.+++.+|+|+|+++++++++...++
T Consensus       182 ~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dva~~~~~l~~~~~~~~  259 (302)
T 1w6u_A          182 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR--IPCGRLGTVEELANLAAFLCSDYASWI  259 (302)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT--CTTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhc--CCcCCCCCHHHHHHHHHHHcCCccccc
Confidence            9999999999999999999999999999999843 3221111111222222  233778999999999999999888889


Q ss_pred             cccEEeeCCCcccCCCCccccCCCccceeeccCCccccchh
Q 044670          235 TGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  275 (302)
                      +|+++.+|||..+.........  .......|+.+.++++.
T Consensus       260 ~G~~~~v~gg~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~  298 (302)
T 1w6u_A          260 NGAVIKFDGGEEVLISGEFNDL--RKVTKEQWDTIEELIRK  298 (302)
T ss_dssp             CSCEEEESTTHHHHHHSTTGGG--GGCCHHHHHHHTTC---
T ss_pred             CCCEEEECCCeeeccCCccccc--hhhccccccChhhhccC
Confidence            9999999999876543332111  22334456666666554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=3.1e-43  Score=302.18  Aligned_cols=228  Identities=25%  Similarity=0.379  Sum_probs=201.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecC--CCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDV--TSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl--~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+++.+++    .....++.+|+  +|+++++++++++.+.
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            57999999999999999999999999999999999988877766554    24567778877  9999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+... ..++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||..+..+.+++..|++|
T Consensus        92 ~g~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  170 (247)
T 3i1j_A           92 FGRLDGLLHNASIIGP-RTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVS  170 (247)
T ss_dssp             HSCCSEEEECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCCEEEECCccCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHH
Confidence            9999999999998543 257788899999999999999999999999999988888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          155 KYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      |++++.|++.++.|+.+ +||+||+|+||++.|++.....          ... .+ .+..+|+|+|++++||+++...+
T Consensus       171 K~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~----------~~~-~~-~~~~~p~dva~~~~~l~s~~~~~  238 (247)
T 3i1j_A          171 KFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAY----------PDE-NP-LNNPAPEDIMPVYLYLMGPDSTG  238 (247)
T ss_dssp             HHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHS----------TTS-CG-GGSCCGGGGTHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhcc----------ccc-Cc-cCCCCHHHHHHHHHHHhCchhcc
Confidence            99999999999999976 7999999999999998753211          111 11 34678999999999999999999


Q ss_pred             ccccEEee
Q 044670          234 VTGLNLVV  241 (302)
Q Consensus       234 ~~G~~~~~  241 (302)
                      +||+.|.+
T Consensus       239 itG~~i~~  246 (247)
T 3i1j_A          239 INGQALNA  246 (247)
T ss_dssp             CCSCEEEC
T ss_pred             ccCeeecC
Confidence            99999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.6e-43  Score=316.68  Aligned_cols=230  Identities=28%  Similarity=0.343  Sum_probs=201.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-------HHHHH---HHhCCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-------GQALA---CKLGEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+.       .++..   +..+.++.++.+|++|++++++++++
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999998763       22222   33467889999999999999999999


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--CCCC
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGS  148 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~  148 (302)
                      +.++++++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.++||++||..+..+  .++.
T Consensus       123 ~~~~~g~iDilVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~  200 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAISL--TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQH  200 (346)
T ss_dssp             HHHHHSCCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSS
T ss_pred             HHHHcCCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCc
Confidence            99999999999999998764  5788899999999999999999999999999999888899999999998877  7788


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCc-ccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYG-LVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      ..|++||++++.+++.++.|++ +||+||+|+||+ +.|++....           ... .+.+++.+|+|+|+++++|+
T Consensus       201 ~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~-----------~~~-~~~~r~~~pedvA~~v~~L~  267 (346)
T 3kvo_A          201 CAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML-----------GGP-GIESQCRKVDIIADAAYSIF  267 (346)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH-----------CC---CGGGCBCTHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh-----------ccc-cccccCCCHHHHHHHHHHHH
Confidence            9999999999999999999999 899999999995 877654211           111 12367889999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++ ..+++|+++ +|||+..
T Consensus       268 s~-~~~itG~~i-vdgg~~~  285 (346)
T 3kvo_A          268 QK-PKSFTGNFV-IDENILK  285 (346)
T ss_dssp             TS-CTTCCSCEE-EHHHHHH
T ss_pred             hc-CCCCCceEE-ECCcEeh
Confidence            99 889999998 9999653

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.8e-43  Score=304.74  Aligned_cols=238  Identities=18%  Similarity=0.211  Sum_probs=202.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH---cCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |++|++|||||++|||++++++|++   +|++|++++|+.+..+++.+++     +.++.++.+|++|+++++++++++.
T Consensus         4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (259)
T 1oaa_A            4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999   8999999999988777666554     4578899999999999999999998


Q ss_pred             H--HcCCcc--EEEEcccCCCCCCCCCCC-CCHHHHHHHHHHHhhHHHHHHHHHHHhhccC--CCCEEEEEcCcccccCC
Q 044670           73 A--KYGKLD--IMYNNAGIVDRGFASVLD-TPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ--HKGCILFTASACTEIAG  145 (302)
Q Consensus        73 ~--~~~~id--~lv~~Ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~iv~~sS~~~~~~~  145 (302)
                      +  .++++|  +||||||+......++.+ .+.++|++++++|+.|+++++++++|.|.++  +.++||++||.++..+.
T Consensus        84 ~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  163 (259)
T 1oaa_A           84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             hccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCC
Confidence            8  678899  999999986421135666 6889999999999999999999999999876  57899999999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      ++...|++||++++.+++.++.|+++  |+||+|+||++.|++.....   ..++....+.... + .+++.+|+|+|++
T Consensus       164 ~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-p-~~~~~~p~dvA~~  239 (259)
T 1oaa_A          164 KGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK-S-DGALVDCGTSAQK  239 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH-H-TTCSBCHHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh-h-cCCcCCHHHHHHH
Confidence            99999999999999999999999974  99999999999999864321   1122222222222 2 3779999999999


Q ss_pred             HHHhccCCCCCccccEEeeCC
Q 044670          223 ALYLATDEASDVTGLNLVVDG  243 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~g  243 (302)
                      +++++++ ..+++|+.+.+||
T Consensus       240 v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          240 LLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHhh-ccccCCcEEeccC
Confidence            9999986 6789999999986

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.5e-43  Score=303.86  Aligned_cols=244  Identities=26%  Similarity=0.437  Sum_probs=204.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----------CCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----------EDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+.+.+.+.          .++.++.+|++|++++++++++
T Consensus         5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            578999999999999999999999999999999999887776655442          4678999999999999999999


Q ss_pred             HHHHcCCc-cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCC
Q 044670           71 AVAKYGKL-DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGS  148 (302)
Q Consensus        71 ~~~~~~~i-d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~  148 (302)
                      +.++++++ |+||||||....  .++.+.+.++|++++++|+.+++++++++.+.|.+++ .++||++||.++..+.++.
T Consensus        85 ~~~~~g~i~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  162 (264)
T 2pd6_A           85 VQACFSRPPSVVVSCAGITQD--EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ  162 (264)
T ss_dssp             HHHHHSSCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTB
T ss_pred             HHHHhCCCCeEEEECCCcCCC--cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCC
Confidence            99999998 999999998654  4677788999999999999999999999999997765 6899999999998888999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||++++.+++.++.|++++||++++|+||+++|++....  .+.....+...  .+.+++.+|+|+|++++++++
T Consensus       163 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~  238 (264)
T 2pd6_A          163 TNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEM--IPMGHLGDPEDVADVVAFLAS  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGG--CTTCSCBCHHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc--CHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999986532  12222112111  123678999999999999999


Q ss_pred             CCCCCccccEEeeCCCcccCCC
Q 044670          229 DEASDVTGLNLVVDGGFSVANP  250 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~~~~  250 (302)
                      +...+++|+.+.+|||+.+...
T Consensus       239 ~~~~~~~G~~~~v~gg~~~~~~  260 (264)
T 2pd6_A          239 EDSGYITGTSVEVTGGLFMAEN  260 (264)
T ss_dssp             GGGTTCCSCEEEESTTC-----
T ss_pred             CcccCCCCCEEEECCCceeccc
Confidence            8778999999999999876543

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4.9e-43  Score=300.73  Aligned_cols=240  Identities=30%  Similarity=0.474  Sum_probs=188.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||+||||++++++|+++|++|+++ .|+++..+.+.+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999998 66766665554443   56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++++++.|.+++.++||++||..+..+.++...|++||+
T Consensus        83 ~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  160 (247)
T 2hq1_A           83 RIDILVNNAGITRD--TLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA  160 (247)
T ss_dssp             CCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence            99999999998653  4566778889999999999999999999999998777899999999988888889999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|++++||++|+++||++.|++....  .+.....+....  +.+++.+++|+|++++++++++..+++|
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G  236 (247)
T 2hq1_A          161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNI--PLKRFGTPEEVANVVGFLASDDSNYITG  236 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTS--TTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhC--CCCCCCCHHHHHHHHHHHcCcccccccC
Confidence            999999999999999999999999999999976542  233333333222  2367899999999999999887788999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+++|||+.
T Consensus       237 ~~~~v~gG~~  246 (247)
T 2hq1_A          237 QVINIDGGLV  246 (247)
T ss_dssp             CEEEESTTC-
T ss_pred             cEEEeCCCcc
Confidence            9999999964

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=8e-43  Score=298.90  Aligned_cols=238  Identities=29%  Similarity=0.455  Sum_probs=207.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ||++|||||+||||++++++|+++|++|+++ +|+.+..+.+.+.+   +.++.++.+|++|+++++++++++.++++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            6899999999999999999999999999985 78877666554433   5678899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||.++..+.++...|++||+++
T Consensus        81 d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (244)
T 1edo_A           81 DVVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             SEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             CEEEECCCCCCC--cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHH
Confidence            999999998754  466778899999999999999999999999999877789999999999888889999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc-cCCCCCcccc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA-TDEASDVTGL  237 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~  237 (302)
                      +.+++.++.|+.++||++++|+||+++|++....  .+.........  .+.+++.+|+|+|+++++++ ++...+++|+
T Consensus       159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~  234 (244)
T 1edo_A          159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGT--IPLGRTGQPENVAGLVEFLALSPAASYITGQ  234 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTS--CTTCSCBCHHHHHHHHHHHHHCSGGGGCCSC
T ss_pred             HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhc--CCCCCCCCHHHHHHHHHHHhCCCccCCcCCC
Confidence            9999999999999999999999999999987543  23333333222  23377899999999999998 6667789999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||+.
T Consensus       235 ~~~v~gG~~  243 (244)
T 1edo_A          235 AFTIDGGIA  243 (244)
T ss_dssp             EEEESTTTT
T ss_pred             EEEeCCCcc
Confidence            999999964

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=2.2e-42  Score=297.92  Aligned_cols=242  Identities=33%  Similarity=0.447  Sum_probs=211.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+.+.+++   +.++.++.+|++|+++++++++++.+++++
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            57899999999999999999999999999999999987766655443   567889999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++ +.+.++|++.+++|+.++++++++++|.|.+++.++||++||..+..+.++...|++||++
T Consensus        89 ~d~vi~~Ag~~~~--~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  165 (255)
T 1fmc_A           89 VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_dssp             CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence            9999999998654  344 6789999999999999999999999999987778999999999999888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|++++||++++++||+++|++..... .+..........  +.+++.+++|+|+++++++++...+++|+
T Consensus       166 ~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G~  242 (255)
T 1fmc_A          166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHT--PIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTC--SSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcC--CcccCCCHHHHHHHHHHHhCCccccCCCc
Confidence            999999999999999999999999999999865432 344444443332  33779999999999999998877889999


Q ss_pred             EEeeCCCcccC
Q 044670          238 NLVVDGGFSVA  248 (302)
Q Consensus       238 ~~~~~gG~~~~  248 (302)
                      ++++|||...+
T Consensus       243 ~~~v~gg~~~s  253 (255)
T 1fmc_A          243 ILTVSGGGVQE  253 (255)
T ss_dssp             EEEESTTSCCC
T ss_pred             EEEECCceecc
Confidence            99999997643

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-42  Score=301.47  Aligned_cols=241  Identities=27%  Similarity=0.346  Sum_probs=206.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH----HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC----KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+......+    ..+.++.++.+|++|+++++++++++.+.++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            578999999999999999999999999999999997655443332    2356789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCC-------C
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIG-------S  148 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~-------~  148 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++++++.|.+++ .++||++||..+..+.+.       .
T Consensus        92 ~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~  169 (265)
T 1h5q_A           92 PISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  169 (265)
T ss_dssp             SEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             CCCEEEECCCcCCC--CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccc
Confidence            99999999998754  4677789999999999999999999999999987654 489999999887665432       7


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||++++.+++.++.|++++||++++|+||+|+|++....  .+.....+... . +.+++.+|+|+|++++++++
T Consensus       170 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~-~-~~~~~~~~~dva~~~~~l~~  245 (265)
T 1h5q_A          170 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASN-I-PLNRFAQPEEMTGQAILLLS  245 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHT-C-TTSSCBCGGGGHHHHHHHHS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhc-C-cccCCCCHHHHHHHHHhhcc
Confidence            89999999999999999999999999999999999999987653  23333333222 2 23778999999999999999


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +...+++|+.+.+|||+.+
T Consensus       246 ~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          246 DHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGGTTCCSCEEEECTTGGG
T ss_pred             CchhcCcCcEEEecCCEeC
Confidence            8888999999999999753

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=7.7e-45  Score=319.79  Aligned_cols=257  Identities=19%  Similarity=0.176  Sum_probs=208.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.++.+...+.++.++.++.+|++|+++++++++++    +++|+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~----~~iD~   89 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV----SGADV   89 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC----CCEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc----CCCCE
Confidence            57999999999999999999999999999999999999888888777778999999999999988888766    68999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-------------CCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-------------GIG  147 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-------------~~~  147 (302)
                      ||||||+..    +..+.+.++|++++++|+.|+++++++++|.|.+    +||++||.++..+             .++
T Consensus        90 lv~nAg~~~----~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~  161 (291)
T 3rd5_A           90 LINNAGIMA----VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSP  161 (291)
T ss_dssp             EEECCCCCS----CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCH
T ss_pred             EEECCcCCC----CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCC
Confidence            999999864    3355678899999999999999999999999853    8999999988755             234


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHCCCC--cEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCC-CHHHHHHHHH
Q 044670          148 SPAYTVSKYGIIALVKILAAELRQYG--LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-NAEGIANAAL  224 (302)
Q Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~g--i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~  224 (302)
                      ...|++||++++.+++.++.|++++|  |+||+|+||+|.|++.....  +....... .  .+.+++. +|+|+|++++
T Consensus       162 ~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~--~~~~~~~~-~--~~~~~~~~~~~~~A~~~~  236 (291)
T 3rd5_A          162 WLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG--RKLGDALM-S--AATRVVATDADFGARQTL  236 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-------------------------CHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc--hHHHHHHH-H--HHHHHHhCCHHHHHHHHH
Confidence            56899999999999999999999887  99999999999999986542  11111111 1  1124444 4999999999


Q ss_pred             HhccCCCCCccccEEeeCCCcccCC--CCccccCCCccceeeccCCccccchhH
Q 044670          225 YLATDEASDVTGLNLVVDGGFSVAN--PSLMKFASPFHLIKAIGDGCRSFLGIS  276 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~  276 (302)
                      |++++  .+++|+++.+|||+....  ....+.+.+....+++|+.+++++|+.
T Consensus       237 ~l~~~--~~~~G~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~~  288 (291)
T 3rd5_A          237 YAASQ--DLPGDSFVGPRFGYLGRTQPVGRSRRAKDAGMAAALWALSEQLTKTE  288 (291)
T ss_dssp             HHHHS--CCCTTCEEEETTSSSSCEEECCCCTGGGCHHHHHHHHHHHHHHHTCC
T ss_pred             HHHcC--CCCCCceeCCcccccCccccCCCCcccCCHHHHHHHHHHHHHHHccc
Confidence            99987  389999999999987532  234566778888999999999888753

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-42  Score=297.69  Aligned_cols=239  Identities=30%  Similarity=0.426  Sum_probs=209.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|+++||||+||||++++++|+++|++|++++|+.+..+.+.+.    .+.++.++.+|++|+++++++++++.+.++
T Consensus         5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999998776655443    356789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++||+
T Consensus        85 ~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  162 (248)
T 2pnf_A           85 GIDILVNNAGITRD--KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKA  162 (248)
T ss_dssp             CCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHH
Confidence            99999999998654  4667788999999999999999999999999998777899999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++.++.|+.++||++++++||+++|++....  .+.....+... .+ .+++.+++|+|+++++++++...+++|
T Consensus       163 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~-~~-~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (248)
T 2pnf_A          163 GLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQ-IP-LGRFGSPEEVANVVLFLCSELASYITG  238 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHT-CT-TSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhc-CC-CCCccCHHHHHHHHHHHhCchhhcCCC
Confidence            999999999999998999999999999999987542  23332222222 22 367899999999999999887788999


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      +++.+|||+
T Consensus       239 ~~~~v~gg~  247 (248)
T 2pnf_A          239 EVIHVNGGM  247 (248)
T ss_dssp             CEEEESTTC
T ss_pred             cEEEeCCCc
Confidence            999999995

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.4e-42  Score=297.54  Aligned_cols=238  Identities=26%  Similarity=0.390  Sum_probs=203.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||+||||++++++|+++|++|++++|+.+..+++.+++. ...++.+|++|+++++++++    .++++|+
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERALG----SVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHT----TCCCCCE
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CCCEEEEeCCCHHHHHHHHH----HcCCCCE
Confidence            478999999999999999999999999999999999887776665553 45778999999999887776    5678999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++.+++|+.+++++++++.+.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        80 vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  157 (244)
T 3d3w_A           80 LVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD  157 (244)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEECCccCCC--cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHH
Confidence            9999998653  4677788999999999999999999999999997665 789999999999988889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.|++++||++++|+||+++|++.......+.....+....  +.+++.+|+|+|+++++++++...+++|+.+
T Consensus       158 ~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 3d3w_A          158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI--PLGKFAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC--CCCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence            99999999999999999999999999998653222222323333322  2378999999999999999887778999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       236 ~v~gG~~~  243 (244)
T 3d3w_A          236 PVEGGFWA  243 (244)
T ss_dssp             EESTTGGG
T ss_pred             EECCCccC
Confidence            99999753

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1.6e-43  Score=316.51  Aligned_cols=244  Identities=18%  Similarity=0.227  Sum_probs=202.2

Q ss_pred             CCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccH---------HHHHHHHh------CCCeEEEEecCCCH--H
Q 044670            2 EGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNL---------GQALACKL------GEDVCYIHCDVTSE--D   62 (302)
Q Consensus         2 ~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~------~~~~~~~~~Dl~~~--~   62 (302)
                      ++|++|||||++  |||++++++|+++|++|++++|++..         .+......      ...+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            589999999985  99999999999999999988876521         11111111      12367888999888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           63 ------------------EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        63 ------------------~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                                        +++++++++.++++++|+||||||+......++.+.+.++|++++++|+.|+++++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999975322368888999999999999999999999999999


Q ss_pred             hccCCCCEEEEEcCcccccCCCCCh-hHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHH-----
Q 044670          125 MIPQHKGCILFTASACTEIAGIGSP-AYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPA-----  197 (302)
Q Consensus       125 l~~~~~~~iv~~sS~~~~~~~~~~~-~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~-----  197 (302)
                      |.++  |+||++||.++..+.+++. .|++||+|+++|++.++.|+++ +||+||+|+||+|.|++.........     
T Consensus       161 m~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~  238 (329)
T 3lt0_A          161 MKPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC---------
T ss_pred             HhhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccc
Confidence            9764  8999999999999999886 9999999999999999999998 89999999999999998765421000     


Q ss_pred             ----------------------------------H---HHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          198 ----------------------------------I---LEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       198 ----------------------------------~---~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                                                        +   ......... +.+++.+|+|+|++++||+++.++++||+.|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~r~~~peevA~~v~fL~s~~a~~itG~~i~  317 (329)
T 3lt0_A          239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYA-PLRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHS-SSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             ccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcC-cccCcCCHHHHHHHHHHHhCchhccccCcEEE
Confidence                                              0   011122222 34889999999999999999999999999999


Q ss_pred             eCCCcccC
Q 044670          241 VDGGFSVA  248 (302)
Q Consensus       241 ~~gG~~~~  248 (302)
                      +|||+.+.
T Consensus       318 vdGG~~~~  325 (329)
T 3lt0_A          318 VDNGLNIM  325 (329)
T ss_dssp             ESTTGGGC
T ss_pred             EcCCeeEE
Confidence            99999864

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1e-42  Score=299.40  Aligned_cols=235  Identities=19%  Similarity=0.259  Sum_probs=197.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||++|||++++++|+++|++|++++|+.+..+++.++++.++.++.+|++|+++++++++++.++++++|+|||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            68999999999999999999999999999999988888877777778899999999999999999999999999999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||+... ..++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.++...|++||++++.+++
T Consensus        81 nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  159 (248)
T 3asu_A           81 NAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSL  159 (248)
T ss_dssp             CCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHH
Confidence            9997631 146778899999999999999999999999999987778999999999999998999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCccc-CCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEee
Q 044670          164 ILAAELRQYGLRVNCVSPYGLV-SGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~  241 (302)
                      .++.|++++||+||+|+||+|. |++...... ...........     ....+|+|+|++++|++++ ..+++|+.+.+
T Consensus       160 ~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~-----~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v  233 (248)
T 3asu_A          160 NLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQN-----TVALTPEDVSEAVWWVSTL-PAHVNINTLEM  233 (248)
T ss_dssp             HHHHHTTTSCCEEEEEEECSBCC---------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEE
T ss_pred             HHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhc-----cCCCCHHHHHHHHHHHhcC-CccceeeEEEE
Confidence            9999999999999999999999 887542111 11111111111     2346999999999999986 46789999999


Q ss_pred             CCCc
Q 044670          242 DGGF  245 (302)
Q Consensus       242 ~gG~  245 (302)
                      +++.
T Consensus       234 ~~~~  237 (248)
T 3asu_A          234 MPVT  237 (248)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            8873

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=3e-43  Score=302.01  Aligned_cols=236  Identities=17%  Similarity=0.171  Sum_probs=199.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-e--cCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIA-D--VQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ||++|||||++|||++++++|+++|++|+++ +  |+.+..+.+.+++ ..     .|+.|+++++++++++.++++++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~-----~~~~~~~~v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PG-----TIALAEQKPERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TT-----EEECCCCCGGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CC-----CcccCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999 6  9988877776655 22     234477888889999999999999


Q ss_pred             EEEEcccCCCCC-CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRG-FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||+.... ..++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||+++
T Consensus        75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  154 (244)
T 1zmo_A           75 TIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAAT  154 (244)
T ss_dssp             EEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHH
T ss_pred             EEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHH
Confidence            999999976420 0367788999999999999999999999999999887789999999999999999999999999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcc---cCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGIS---SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +.|++.++.|++++||+||+|+||+|.|++.   ..... ++....+..... +.+++.+|+|+|++++||+++...+++
T Consensus       155 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~-p~~r~~~pe~vA~~v~~l~s~~~~~~t  232 (244)
T 1zmo_A          155 VALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN-NPELRERVDRDV-PLGRLGRPDEMGALITFLASRRAAPIV  232 (244)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH-CHHHHHHHHHHC-TTCSCBCHHHHHHHHHHHHTTTTGGGT
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc-hHHHHHHHhcCC-CCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            9999999999999999999999999999986   32110 122222322112 337899999999999999999889999


Q ss_pred             ccEEeeCCCcc
Q 044670          236 GLNLVVDGGFS  246 (302)
Q Consensus       236 G~~~~~~gG~~  246 (302)
                      |+.+.+|||+.
T Consensus       233 G~~i~vdgG~~  243 (244)
T 1zmo_A          233 GQFFAFTGGYL  243 (244)
T ss_dssp             TCEEEESTTCC
T ss_pred             CCEEEeCCCCC
Confidence            99999999963

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.9e-42  Score=293.99  Aligned_cols=228  Identities=21%  Similarity=0.262  Sum_probs=201.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++|++|||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.++.+|++|+++++++++++.+++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999999999988776655433    578999999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|. ++.+++|++||..+..+.++...|++||++
T Consensus        81 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa  157 (235)
T 3l77_A           81 VDVVVANAGLGYF--KRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDVSARLIPYGGGYVSTKWA  157 (235)
T ss_dssp             CSEEEECCCCCCC--CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGGGSSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCccccc--cCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecchhcccCCCcchHHHHHHH
Confidence            9999999998764  5788889999999999999999999999999994 446899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.+  ..||+||+|+||+|.|++.........            ..++.+|+|+|++++||++++..+++|+
T Consensus       158 ~~~~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~~~~------------~~~~~~p~dva~~v~~l~~~~~~~~~~~  223 (235)
T 3l77_A          158 ARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKPK------------EKGYLKPDEIAEAVRCLLKLPKDVRVEE  223 (235)
T ss_dssp             HHHHHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSCCCG------------GGTCBCHHHHHHHHHHHHTSCTTCCCCE
T ss_pred             HHHHHHHHhhc--CCCeEEEEEeCCccccccccccCCccc------------ccCCCCHHHHHHHHHHHHcCCCCCccce
Confidence            99999999544  669999999999999998765432111            1357899999999999999999999999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+..|+|..
T Consensus       224 ~~~~~~~~~  232 (235)
T 3l77_A          224 LMLRSVYQR  232 (235)
T ss_dssp             EEECCTTSC
T ss_pred             EEEeecccC
Confidence            999999964

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.6e-43  Score=302.57  Aligned_cols=242  Identities=24%  Similarity=0.302  Sum_probs=195.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH-cC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK-YG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..+.+.+++   +.++.++.+|++|+++++++++++.++ ++
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999999999999988776665544   567889999999999999999999886 89


Q ss_pred             CccEEEEccc--CCC---CCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           77 KLDIMYNNAG--IVD---RGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        77 ~id~lv~~Ag--~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      ++|+||||||  +..   ....++.+.+.++|++++++|+.+++++++.+.|.|.+++.++||++||.++..+. +...|
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y  161 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPY  161 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHH
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCch
Confidence            9999999995  320   01146677888999999999999999999999999987778999999999887643 46899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHH-HHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL-EAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++||++++.+++.++.|++++||+||+|+||+|.|++........... .........+.++..+|+|+|++++||++++
T Consensus       162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~~  241 (260)
T 2qq5_A          162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDP  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTCT
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcCc
Confidence            999999999999999999999999999999999999865432111110 1111111112244678999999999999987


Q ss_pred             C-CCccccEEeeCC
Q 044670          231 A-SDVTGLNLVVDG  243 (302)
Q Consensus       231 ~-~~~~G~~~~~~g  243 (302)
                      . .++||+++.+|+
T Consensus       242 ~~~~itG~~i~~~~  255 (260)
T 2qq5_A          242 NILSLSGKVLPSCD  255 (260)
T ss_dssp             TGGGGTTCEEEHHH
T ss_pred             ccccccceeechhh
Confidence            6 489999998764

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=5.2e-42  Score=299.80  Aligned_cols=241  Identities=22%  Similarity=0.370  Sum_probs=206.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+.+.+.   .+.++.++.+|++|+++++++++++.+.+++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999988765554433   3567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCC-CCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--CCCChhHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVL-DTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGSPAYTVS  154 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~s  154 (302)
                      +|+||||||..... .++. +.+.++|++.+++|+.+++++++.+++.|.+++.++||++||.++..+  .++...|++|
T Consensus       112 id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~s  190 (279)
T 3ctm_A          112 IDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTA  190 (279)
T ss_dssp             CSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred             CCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHH
Confidence            99999999976431 2445 678899999999999999999999999998777899999999998877  7788899999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |++++.+++.++.|++++| +||+|+||++.|++....  .+.....+....  +.+++.+|+|+|+++++++++...++
T Consensus       191 K~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~--p~~~~~~~~dvA~~~~~l~s~~~~~~  265 (279)
T 3ctm_A          191 KAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLT--PLGREGLTQELVGGYLYLASNASTFT  265 (279)
T ss_dssp             HHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHS--TTCSCBCGGGTHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhC--CccCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999 999999999999987432  333333333322  23779999999999999999888899


Q ss_pred             cccEEeeCCCccc
Q 044670          235 TGLNLVVDGGFSV  247 (302)
Q Consensus       235 ~G~~~~~~gG~~~  247 (302)
                      +|+++.+|||+.+
T Consensus       266 tG~~i~vdgG~~~  278 (279)
T 3ctm_A          266 TGSDVVIDGGYTC  278 (279)
T ss_dssp             CSCEEEESTTCCC
T ss_pred             cCCEEEECCCeec
Confidence            9999999999753

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.6e-42  Score=321.65  Aligned_cols=239  Identities=26%  Similarity=0.329  Sum_probs=203.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH--HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC-
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL--GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK-   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~-   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+...  ..+..+..  ...++.+|++|+++++++++++.+++++ 
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~--~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~  288 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV--GGTALTLDVTADDAVDKITAHVTEHHGGK  288 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH--TCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc--CCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence            478999999999999999999999999999999987532  33333444  3578999999999999999999999986 


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|++++.+++.+.|..++.++||++||.++..+.+++..|++||++
T Consensus       289 id~lV~nAGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaa  366 (454)
T 3u0b_A          289 VDILVNNAGITRD--KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAG  366 (454)
T ss_dssp             CSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             ceEEEECCcccCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHH
Confidence            9999999998765  57888999999999999999999999999999988788999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.|++.++.|++++||+||+|+||+|.|++.......   .........+ .++..+|+|+|++++||+++.+.++||+
T Consensus       367 l~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~-l~r~g~pedvA~~v~fL~s~~a~~itG~  442 (454)
T 3u0b_A          367 MIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA---TREVGRRLNS-LFQGGQPVDVAELIAYFASPASNAVTGN  442 (454)
T ss_dssp             HHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------CHHHHHSBT-TSSCBCHHHHHHHHHHHHCGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh---hHHHHHhhcc-ccCCCCHHHHHHHHHHHhCCccCCCCCc
Confidence            99999999999999999999999999999987653211   1122222223 3778999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      +|.+|||..+
T Consensus       443 ~i~vdGG~~l  452 (454)
T 3u0b_A          443 TIRVCGQAML  452 (454)
T ss_dssp             EEEESSSBSC
T ss_pred             EEEECCcccc
Confidence            9999999764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-42  Score=294.49  Aligned_cols=238  Identities=26%  Similarity=0.370  Sum_probs=205.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+++.+.. ...+++.+|++|+++++++++    .++++|+
T Consensus         5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~----~~~~id~   79 (244)
T 1cyd_A            5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-PGIEPVCVDLGDWDATEKALG----GIGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-TTCEEEECCTTCHHHHHHHHT----TCCCCSE
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-cCCCcEEecCCCHHHHHHHHH----HcCCCCE
Confidence            57899999999999999999999999999999999988776665544 346778999999999887776    5678999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++.+++|+.+++++++++++.|.+++ .++||++||..+..+.++...|++||++++
T Consensus        80 vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  157 (244)
T 1cyd_A           80 LVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT  157 (244)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEECCcccCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence            9999998653  4677788999999999999999999999999997766 689999999999988889999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .+++.++.|++++||++++|+||+++|++.......+.....+....  +.+++.+++|+|++++++++++..+++|+.+
T Consensus       158 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~  235 (244)
T 1cyd_A          158 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH--PLRKFAEVEDVVNSILFLLSDRSASTSGGGI  235 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS--TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC--CccCCCCHHHHHHHHHHHhCchhhcccCCEE
Confidence            99999999999999999999999999997653322344434444332  2378999999999999999988888999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       236 ~v~gG~~~  243 (244)
T 1cyd_A          236 LVDAGYLA  243 (244)
T ss_dssp             EESTTGGG
T ss_pred             EECCCccC
Confidence            99999753

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.2e-42  Score=303.83  Aligned_cols=245  Identities=29%  Similarity=0.379  Sum_probs=207.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+...+++        +.++.++.+|++|+++++++++++.
T Consensus        16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987776655543        4578999999999999999999999


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      ++++++|+||||||....  .++.+.+.++|++++++|+.+++++++++++.+.+++.++||++||.+ ..+.++...|+
T Consensus        96 ~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~  172 (303)
T 1yxm_A           96 DTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSG  172 (303)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhH
Confidence            999999999999997643  466778899999999999999999999999966555578999999988 77788889999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +||++++.+++.++.|+.++||++++|+||+++|++......  .+.........  .+.+++.+|+|+|+++++++++.
T Consensus       173 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~dvA~~i~~l~~~~  250 (303)
T 1yxm_A          173 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--IPAKRIGVPEEVSSVVCFLLSPA  250 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--STTSSCBCTHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc--CcccCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999995322111  11111222222  13377899999999999999988


Q ss_pred             CCCccccEEeeCCCcccCCC
Q 044670          231 ASDVTGLNLVVDGGFSVANP  250 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~~~~  250 (302)
                      ..+++|+++.+|||......
T Consensus       251 ~~~~~G~~~~v~gG~~~~~~  270 (303)
T 1yxm_A          251 ASFITGQSVDVDGGRSLYTH  270 (303)
T ss_dssp             GTTCCSCEEEESTTGGGCBT
T ss_pred             cccCCCcEEEECCCeecccc
Confidence            88999999999999886543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.3e-42  Score=299.73  Aligned_cols=232  Identities=20%  Similarity=0.235  Sum_probs=197.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH--HhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC--KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      |++|||||++|||++++++|+++|++|++++|+.+..+.+.+  ..+.++..+     |+++++++++++.++++++|+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEE
Confidence            689999999999999999999999999999998876655433  224444443     6777888999999999999999


Q ss_pred             EEcccCC-CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           82 YNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        82 v~~Ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      |||||+. ..  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|++||++++.
T Consensus        77 v~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  154 (254)
T 1zmt_A           77 VSNDIFAPEF--QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT  154 (254)
T ss_dssp             EEECCCCCCC--CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCcCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence            9999986 43  57778899999999999999999999999999987778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcc---------cCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGL---------VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +++.++.|++++||+||+|+||+|         .|++...   .++....+... . +.+++.+|+|+|+++++++++..
T Consensus       155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~-~-p~~~~~~p~dvA~~v~~l~s~~~  229 (254)
T 1zmt_A          155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKV-T-ALQRLGTQKELGELVAFLASGSC  229 (254)
T ss_dssp             HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHH-S-SSSSCBCHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhcc-C-CCCCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999         5554432   12233333222 2 33779999999999999999888


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+++.+|||+..
T Consensus       230 ~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          230 DYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             GGGTTCEEEESTTCCC
T ss_pred             CCccCCEEEECCCchh
Confidence            8999999999999764

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.8e-43  Score=305.43  Aligned_cols=233  Identities=27%  Similarity=0.365  Sum_probs=191.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..++..+++    +..+.++.+|++|+++++++++++.+++|
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999988777665554    23358999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccCCCCChhHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++|+||||||.... ..++.+.+.++|++++++|+.|+++++++++|.|.+++  .|+||++||.++..+.++...|++|
T Consensus       111 ~iD~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  189 (281)
T 4dry_A          111 RLDLLVNNAGSNVP-PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTAT  189 (281)
T ss_dssp             CCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCEEEECCCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHH
Confidence            99999999998643 14778899999999999999999999999999998764  6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC-C
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS-D  233 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~-~  233 (302)
                      |++++.+++.++.|++++||+||+|+||+|.|++.........   ....  ..+.+++.+|+|+|++++||++.+.. .
T Consensus       190 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~---~~~~--~~~~~~~~~pedvA~~v~fL~s~~~~~~  264 (281)
T 4dry_A          190 KHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVL---QANG--EVAAEPTIPIEHIAEAVVYMASLPLSAN  264 (281)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEEE---CTTS--CEEECCCBCHHHHHHHHHHHHHSCTTEE
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchhh---hhhh--cccccCCCCHHHHHHHHHHHhCCCccCc
Confidence            9999999999999999999999999999999998754321100   0000  11236789999999999999986544 3


Q ss_pred             ccccEE
Q 044670          234 VTGLNL  239 (302)
Q Consensus       234 ~~G~~~  239 (302)
                      +++..+
T Consensus       265 i~~~~i  270 (281)
T 4dry_A          265 VLTMTV  270 (281)
T ss_dssp             EEEEEE
T ss_pred             cccEEE
Confidence            444333

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=2.1e-42  Score=298.42  Aligned_cols=240  Identities=28%  Similarity=0.368  Sum_probs=207.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC-ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+ .+..+.+.+++   +.++.++.+|++|+++++++++++.++++
T Consensus         5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999998 77666555444   56789999999999999999999999999


Q ss_pred             CccEEEEcccC-CCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--C---CEEEEEcCccccc-CCCCCh
Q 044670           77 KLDIMYNNAGI-VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--K---GCILFTASACTEI-AGIGSP  149 (302)
Q Consensus        77 ~id~lv~~Ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~iv~~sS~~~~~-~~~~~~  149 (302)
                      ++|+||||||. ...  .++.+.+.++|++++++|+.++++++++++|.|.+++  .   ++||++||..+.. +.++..
T Consensus        85 ~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  162 (258)
T 3afn_B           85 GIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG  162 (258)
T ss_dssp             SCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred             CCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence            99999999997 432  4677788999999999999999999999999986543  3   8999999998887 788899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      .|++||++++.+++.++.|++++||++++|+||+++|++....  .+.....+...  .+.+++.+++|+|+++++++++
T Consensus       163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNG--IPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTT--CTTCSCBCGGGTHHHHHHHHCH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhcc--CCCCcCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999987643  33333333322  2337799999999999999987


Q ss_pred             CCC-CccccEEeeCCCcc
Q 044670          230 EAS-DVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~-~~~G~~~~~~gG~~  246 (302)
                      ... +++|+++++|||..
T Consensus       239 ~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          239 LASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHHTTCCSEEEEESTTSS
T ss_pred             chhccccCCEEeECCCcc
Confidence            666 88999999999964

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=7.3e-42  Score=292.96  Aligned_cols=238  Identities=28%  Similarity=0.430  Sum_probs=207.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh---CCCeEE-EEecCCCHHHHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL---GEDVCY-IHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~---~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|++|||||+||||++++++|+++|++|+++ +|+.+..+.+.+.+   +.++.+ +.+|++|+++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            5899999999999999999999999999998 88877766554443   445666 899999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++||++
T Consensus        81 ~d~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  158 (245)
T 2ph3_A           81 LDTLVNNAGITRD--TLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAG  158 (245)
T ss_dssp             CCEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHH
T ss_pred             CCEEEECCCCCCC--CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHH
Confidence            9999999998654  46777889999999999999999999999999987777999999999888888899999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      ++.+++.++.|+.++||++++|+||+++|++....  .+.....+....  +.+++.+++|+|++++++++++..+++|+
T Consensus       159 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~~~~~~~~~G~  234 (245)
T 2ph3_A          159 LIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQI--PAGRFGRPEEVAEAVAFLVSEKAGYITGQ  234 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTC--TTCSCBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCcccccccCC
Confidence            99999999999999999999999999999987643  233333333322  23778999999999999998877789999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      .+.+|||..
T Consensus       235 ~~~v~gg~~  243 (245)
T 2ph3_A          235 TLCVDGGLT  243 (245)
T ss_dssp             EEEESTTCS
T ss_pred             EEEECCCCC
Confidence            999999964

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.1e-42  Score=301.32  Aligned_cols=238  Identities=22%  Similarity=0.241  Sum_probs=197.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+ |++|||||++|||++++++|+++|++|++++|+.+..+++.+++.  .++.++.+|++|+++++++++++.++++++
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            45 899999999999999999999999999999999888877776664  378899999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |+||||||+... ..++.+.+.++|++++++|+.|++++++.++|.|.+++.+ +||++||.++..+.++...|++||++
T Consensus        99 D~lvnnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa  177 (272)
T 2nwq_A           99 RGLINNAGLALG-TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAF  177 (272)
T ss_dssp             CEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHH
Confidence            999999998642 1467788999999999999999999999999999877778 99999999999988999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ++.+++.++.|++++||+||+|+||++.|++...... ..........   .  ....+|+|+|++++|++++ ..+++|
T Consensus       178 ~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~---~--~~~~~pedvA~~v~~l~s~-~~~~~g  251 (272)
T 2nwq_A          178 VEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYA---G--AHPIQPEDIAETIFWIMNQ-PAHLNI  251 (272)
T ss_dssp             HHHHHHHHHTTCTTSCCEEEEEEECSBC-----------------------C--CCCBCHHHHHHHHHHHHTS-CTTEEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhc---c--CCCCCHHHHHHHHHHHhCC-CccCcc
Confidence            9999999999999999999999999999998643211 1111111111   1  2357999999999999986 467999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+++|..
T Consensus       252 ~~i~v~~~~~  261 (272)
T 2nwq_A          252 NSLEIMPVSQ  261 (272)
T ss_dssp             EEEEEEETTE
T ss_pred             ceEEEeeccC
Confidence            9999999843

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=4.1e-42  Score=290.97  Aligned_cols=215  Identities=27%  Similarity=0.300  Sum_probs=187.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.+                 +|++|+++++++++++    +++|+
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------~D~~~~~~v~~~~~~~----g~id~   62 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------LDISDEKSVYHYFETI----GAFDH   62 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------CCTTCHHHHHHHHHHH----CSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------cCCCCHHHHHHHHHHh----CCCCE
Confidence            47899999999999999999999999999999998765                 7999999988888754    79999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||.... ..++.+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|++||++++.
T Consensus        63 lv~nAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~  139 (223)
T 3uce_A           63 LIVTAGSYAP-AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEA  139 (223)
T ss_dssp             EEECCCCCCC-CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC-CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHH
Confidence            9999998632 257888999999999999999999999999999965  5899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHH----HHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAIL----EAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.++.|+++  |+||+|+||++.|++.....  +...    +.+...  .+.+++.+|+|+|++++++++  ..+++|
T Consensus       140 ~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~dvA~~~~~l~~--~~~~tG  211 (223)
T 3uce_A          140 TTKVLAKELAP--IRVNAISPGLTKTEAYKGMN--ADDRDAMYQRTQSH--LPVGKVGEASDIAMAYLFAIQ--NSYMTG  211 (223)
T ss_dssp             HHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC--HHHHHHHHHHHHHH--STTCSCBCHHHHHHHHHHHHH--CTTCCS
T ss_pred             HHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc--hhhHHHHHHHHhhc--CCCCCccCHHHHHHHHHHHcc--CCCCCC
Confidence            99999999987  99999999999999876542  2222    222222  234889999999999999997  478999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      +++.+|||+.+
T Consensus       212 ~~i~vdgG~~~  222 (223)
T 3uce_A          212 TVIDVDGGALL  222 (223)
T ss_dssp             CEEEESTTGGG
T ss_pred             cEEEecCCeec
Confidence            99999999865

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=3.3e-43  Score=312.95  Aligned_cols=258  Identities=24%  Similarity=0.317  Sum_probs=214.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe---------cCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD---------VQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~---------r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++|||++++++|+++|++|++++         |+.++.+...+++........+|++|.++++++++++
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            5799999999999999999999999999999974         4555565555444211112358999999999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      .++++++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++.++||++||.++..+.+++..|
T Consensus        87 ~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y  164 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY  164 (319)
T ss_dssp             HHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHH
Confidence            9999999999999998764  46777899999999999999999999999999987778999999999998888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||++++.|++.+++|++++||+||+|+||++ |++..... .+..            ....+|+|+|++++|++++. 
T Consensus       165 ~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~-~~~~------------~~~~~p~dvA~~~~~l~s~~-  229 (319)
T 1gz6_A          165 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM-PEDL------------VEALKPEYVAPLVLWLCHES-  229 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS-CHHH------------HHHSCGGGTHHHHHHHTSTT-
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC-Chhh------------hccCCHHHHHHHHHHHhCch-
Confidence            999999999999999999999999999999998 77654321 1111            11458999999999999874 


Q ss_pred             CCccccEEeeCCCcccCCCC---------ccccCCCccceeeccCCccccchh
Q 044670          232 SDVTGLNLVVDGGFSVANPS---------LMKFASPFHLIKAIGDGCRSFLGI  275 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~g~  275 (302)
                      .+++|++|.+|||+......         ..+...++....++|+.+.++++.
T Consensus       230 ~~~tG~~~~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lw~~~~~~~~~  282 (319)
T 1gz6_A          230 CEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDFSNA  282 (319)
T ss_dssp             CCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCCTTC
T ss_pred             hhcCCCEEEECCCeEEEEeeeeccceeccCCCCCCCHHHHHHHHHHhhccccc
Confidence            57899999999998742111         124456778889999999999886

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-42  Score=294.27  Aligned_cols=229  Identities=22%  Similarity=0.289  Sum_probs=193.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+    .++ ...++ +|+  .++++++++++    .++|+
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~-~~~~~-~D~--~~~~~~~~~~~----~~iD~   84 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSG-HRYVV-CDL--RKDLDLLFEKV----KEVDI   84 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTC-SEEEE-CCT--TTCHHHHHHHS----CCCSE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hhC-CeEEE-eeH--HHHHHHHHHHh----cCCCE
Confidence            57999999999999999999999999999999999874332    233 56777 999  45666666544    37999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.++..+.++...|++||++++.
T Consensus        85 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~  162 (249)
T 1o5i_A           85 LVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG  162 (249)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHH
Confidence            9999997654  46778899999999999999999999999999987778999999999999998999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH-HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE-AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +++.++.|++++||+||+|+||++.|++.....  +.... .+...  .+.+++.+|+|+|+++++++++...+++|+++
T Consensus       163 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~--~p~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~  238 (249)
T 1o5i_A          163 FLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQ--IPMRRMAKPEEIASVVAFLCSEKASYLTGQTI  238 (249)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTT--STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhc--CCCCCCcCHHHHHHHHHHHcCccccCCCCCEE
Confidence            999999999999999999999999999864321  12222 22222  23378999999999999999988889999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       239 ~vdgG~~~  246 (249)
T 1o5i_A          239 VVDGGLSK  246 (249)
T ss_dssp             EESTTCCC
T ss_pred             EECCCccc
Confidence            99999754

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-41  Score=287.72  Aligned_cols=231  Identities=22%  Similarity=0.297  Sum_probs=206.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      ++|++|||||+||||++++++|+++|+       +|++++|+.+..+.+.+.+   +.++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999       9999999987777665554   457889999999999999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      .++++++|+||||||....  .++.+.+.++|++.+++|+.+++++++.++|.|.+++.++||++||.++..+.++...|
T Consensus        81 ~~~~g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHHTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHhCCCCCEEEEcCCcCCc--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchh
Confidence            9999999999999998754  46777889999999999999999999999999987778999999999999998999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||++++.+++.++.|+.++||++++|+||+++|++....... .       .     .++.+|+|+|++++++++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-------~-----~~~~~~~dva~~~~~l~~~~~  225 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-M-------Q-----ALMMMPEDIAAPVVQAYLQPS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-T-------G-----GGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcccc-c-------c-----ccCCCHHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999999987643211 0       0     247899999999999999989


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                      .+++|+++..+++..+
T Consensus       226 ~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          226 RTVVEEIILRPTSGDI  241 (244)
T ss_dssp             TEEEEEEEEEETTCCC
T ss_pred             cccchheEEecccccc
Confidence            9999999999998654

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=4.2e-41  Score=294.38  Aligned_cols=239  Identities=23%  Similarity=0.290  Sum_probs=202.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|++|||||+||||++++++|+++|++|++++|+.+..+++.+..+.++.++.+|++|+++++++++++.++++++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            36899999999999999999999999999999999999888888777788999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.|++++++.++|.|++++.++||++||..+..+.++...|++||++++.
T Consensus        83 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (281)
T 3m1a_A           83 LVNNAGRTQV--GAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQ  160 (281)
T ss_dssp             EEECCCCEEE--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHH
Confidence            9999998654  57778899999999999999999999999999988778999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHHHHH---H-hccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILEAFL---S-EMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~---~-~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +++.++.|++++||+||+|+||+|.|++.....     ..+.......   . ....+.+++.+|+|+|++++++++.+.
T Consensus       161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~~  240 (281)
T 3m1a_A          161 LSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALDTEK  240 (281)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHHSSS
T ss_pred             HHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHhCCC
Confidence            999999999999999999999999999865321     1111111111   1 111233778999999999999997654


Q ss_pred             CCccccEEeeCCC
Q 044670          232 SDVTGLNLVVDGG  244 (302)
Q Consensus       232 ~~~~G~~~~~~gG  244 (302)
                         .+..+++.++
T Consensus       241 ---~~~~~~l~s~  250 (281)
T 3m1a_A          241 ---TPLRLALGGD  250 (281)
T ss_dssp             ---CCSEEEESHH
T ss_pred             ---CCeEEecCch
Confidence               3666666554

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=3.7e-41  Score=297.11  Aligned_cols=243  Identities=22%  Similarity=0.224  Sum_probs=195.9

Q ss_pred             CCCCEEEEeCCC--ChHHHHHHHHHHHcCCEEEEEecCccH-----------HHHHHHHhC-C----CeEEEEec-----
Q 044670            1 LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQDNL-----------GQALACKLG-E----DVCYIHCD-----   57 (302)
Q Consensus         1 l~gk~vlVTGas--~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~-~----~~~~~~~D-----   57 (302)
                      |+||++|||||+  +|||++++++|+++|++|++++|++..           .+++ +.+. .    ....+.+|     
T Consensus         6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   84 (297)
T 1d7o_A            6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDN   84 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCS
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccc
Confidence            579999999999  999999999999999999999875321           1111 1111 0    12344443     


Q ss_pred             ---CC------------CHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH
Q 044670           58 ---VT------------SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA  122 (302)
Q Consensus        58 ---l~------------~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  122 (302)
                         ++            |+++++++++++.++++++|+||||||+......++.+.+.++|++++++|+.++++++++++
T Consensus        85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~  164 (297)
T 1d7o_A           85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL  164 (297)
T ss_dssp             GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred             hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence               32            267899999999999999999999999754222577788999999999999999999999999


Q ss_pred             HhhccCCCCEEEEEcCcccccCCCCC-hhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCCCHHHHH
Q 044670          123 RVMIPQHKGCILFTASACTEIAGIGS-PAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSINPAILE  200 (302)
Q Consensus       123 ~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~~~~~~~  200 (302)
                      |+|.+  .++||++||.++..+.+++ ..|++||++++.|++.++.|+++ +||+||+|+||+|.|++.......+....
T Consensus       165 ~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~  242 (297)
T 1d7o_A          165 PIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIE  242 (297)
T ss_dssp             GGEEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHH
T ss_pred             HHhcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHHHH
Confidence            99965  4899999999998888887 69999999999999999999985 89999999999999998765321122222


Q ss_pred             HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          201 AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       201 ~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .+... . +.+++.+|+|+|++++||+++...+++|+.+.+|||+.+.
T Consensus       243 ~~~~~-~-p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~~  288 (297)
T 1d7o_A          243 YSYNN-A-PIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSM  288 (297)
T ss_dssp             HHHHH-S-SSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             Hhhcc-C-CCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCceee
Confidence            22222 2 3378899999999999999988899999999999998764

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-41  Score=291.92  Aligned_cols=239  Identities=26%  Similarity=0.393  Sum_probs=204.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |++|++|||||+||||++++++|+++|++|++++| +.+..+.+.+.+   +.++.++.+|++|+++++++++++.++++
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999 665555544433   56788999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||....  .++.+.+.++|++.+++|+.+++++++++++.|. ++ ++||++||.++. .+.++...|++||
T Consensus        99 ~~d~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~~~~~~~~~Y~~sK  174 (274)
T 1ja9_A           99 GLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVMTGIPNHALYAGSK  174 (274)
T ss_dssp             CEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhccCCCCCCchHHHHH
Confidence            99999999998653  4667788999999999999999999999999997 33 899999999888 7778899999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----------CCC-HHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----------SIN-PAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----------~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      ++++.+++.++.|++++||++++|+||++.|++....          ... ++....+...  .+.+++.+++|+|++++
T Consensus       175 ~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~i~  252 (274)
T 1ja9_A          175 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM--NPLKRIGYPADIGRAVS  252 (274)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT--STTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc--CCCCCccCHHHHHHHHH
Confidence            9999999999999999999999999999999876520          112 2222222222  22377999999999999


Q ss_pred             HhccCCCCCccccEEeeCCCc
Q 044670          225 YLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      ++++++..+++|+++++|||+
T Consensus       253 ~l~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          253 ALCQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhCcccccccCcEEEecCCc
Confidence            999887788999999999995

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.9e-41  Score=288.10  Aligned_cols=224  Identities=16%  Similarity=0.211  Sum_probs=187.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||++|||++++++|+++|++|++++|+++..+++.+.++.++.++.+|++|+++++++++++.+   ..|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv~   78 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDS---IPSTVVH   78 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSS---CCSEEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhh---cCCEEEE
Confidence            6899999999999999999999999999999999998888888777889999999999999998886643   3499999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++ ++||++||..+..+.++...|++||++++.|++
T Consensus        79 ~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~  155 (230)
T 3guy_A           79 SAGSGYF--GLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIE  155 (230)
T ss_dssp             CCCCCCC--SCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred             eCCcCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHHHH
Confidence            9998764  5778889999999999999999999999999997764 499999999999999999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc-CCCCCccccEEeeC
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT-DEASDVTGLNLVVD  242 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s-~~~~~~~G~~~~~~  242 (302)
                      .++.|++++||+||+|+||+|.|++.......            .+.+++.+|+|+|++++++++ +...+++|+.+..+
T Consensus       156 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------------~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          156 SVRLELKGKPMKIIAVYPGGMATEFWETSGKS------------LDTSSFMSAEDAALMIHGALANIGNGYVSDITVNRE  223 (230)
T ss_dssp             HHHHHTTTSSCEEEEEEECCC----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC-
T ss_pred             HHHHHHHhcCeEEEEEECCcccChHHHhcCCC------------CCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCC
Confidence            99999999999999999999999987543210            112678999999999999987 67789999999887


Q ss_pred             CCc
Q 044670          243 GGF  245 (302)
Q Consensus       243 gG~  245 (302)
                      ...
T Consensus       224 ~~~  226 (230)
T 3guy_A          224 GHH  226 (230)
T ss_dssp             ---
T ss_pred             CCC
Confidence            653

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=4e-41  Score=299.33  Aligned_cols=244  Identities=21%  Similarity=0.215  Sum_probs=194.7

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCcc-----------HHHHHHHHhC--C---CeEEEEecC----
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDN-----------LGQALACKLG--E---DVCYIHCDV----   58 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~-----------~~~~~~~~~~--~---~~~~~~~Dl----   58 (302)
                      |+||++|||||  ++|||++++++|+++|++|++++|++.           ..++. +.+.  .   ...++.+|+    
T Consensus         7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~   85 (315)
T 2o2s_A            7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAFDK   85 (315)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTCSS
T ss_pred             CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccccc
Confidence            57899999999  899999999999999999999987531           11122 1221  1   024444443    


Q ss_pred             --------C--------CHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHH
Q 044670           59 --------T--------SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA  122 (302)
Q Consensus        59 --------~--------~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~  122 (302)
                              +        |+++++++++++.+++|++|+||||||+......++.+.+.++|++++++|+.++++++++++
T Consensus        86 ~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  165 (315)
T 2o2s_A           86 PEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFG  165 (315)
T ss_dssp             TTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHS
T ss_pred             cchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHH
Confidence                    3        366899999999999999999999999763212577788999999999999999999999999


Q ss_pred             HhhccCCCCEEEEEcCcccccCCCCC-hhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCCCC--CHHH
Q 044670          123 RVMIPQHKGCILFTASACTEIAGIGS-PAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRNSI--NPAI  198 (302)
Q Consensus       123 ~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~~~--~~~~  198 (302)
                      |+|.+  .|+||++||.++..+.+++ ..|++||++++.|++.++.|+++ +||+||+|+||+|.|++......  .+..
T Consensus       166 ~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~  243 (315)
T 2o2s_A          166 PIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF  243 (315)
T ss_dssp             TTEEE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred             HHHhc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence            99965  3899999999998888887 58999999999999999999985 89999999999999997543211  1111


Q ss_pred             HH---HHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          199 LE---AFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       199 ~~---~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      ..   ....... +.+++.+|+|+|++++||+++...+++|+++.+|||+.+.
T Consensus       244 ~~~~~~~~~~~~-p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  295 (315)
T 2o2s_A          244 IDYAIDYSYNNA-PLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHAM  295 (315)
T ss_dssp             HHHHHHHHHHHS-SSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHHhccC-CCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeeee
Confidence            11   1112222 3478999999999999999998899999999999998753

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=1.7e-41  Score=290.47  Aligned_cols=222  Identities=14%  Similarity=0.104  Sum_probs=194.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      ++|++|||||++|||++++++|+++|++|++++|+.+...       ....++.+|++|+++++++++++.+++  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            6899999999999999999999999999999999876532       245678899999999999999999999  7999


Q ss_pred             EEEEcccCCCCCCCCC-CCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASV-LDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      +||||||....  .++ .+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|++||+++
T Consensus        79 ~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~  154 (241)
T 1dhr_A           79 AILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAV  154 (241)
T ss_dssp             EEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             EEEEcccccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHH
Confidence            99999998653  455 67788999999999999999999999999965  48999999999999999999999999999


Q ss_pred             HHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          159 IALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       159 ~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.+++.++.|++  ++||+||+|+||++.|++.......           .. ..+..+++|+|+++++++++...+++|
T Consensus       155 ~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~-----------~~-~~~~~~~~~vA~~v~~l~~~~~~~~~G  222 (241)
T 1dhr_A          155 HQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE-----------AD-FSSWTPLEFLVETFHDWITGNKRPNSG  222 (241)
T ss_dssp             HHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT-----------SC-GGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred             HHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc-----------hh-hccCCCHHHHHHHHHHHhcCCCcCccc
Confidence            999999999998  8999999999999999875421100           00 123567999999999999998899999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      +.+.+|||..
T Consensus       223 ~~~~v~g~~~  232 (241)
T 1dhr_A          223 SLIQVVTTDG  232 (241)
T ss_dssp             CEEEEEEETT
T ss_pred             eEEEEeCCCC
Confidence            9999999854

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-40  Score=288.88  Aligned_cols=237  Identities=26%  Similarity=0.386  Sum_probs=197.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..++..+.+     +.++.++.+|++|+++++++++++.+++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            47899999999999999999999999999999999987766655544     2358899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|+||||||...          .++|++.+++|+.+++.+++.+++.|.+++   .++||++||.++..+.++...|+
T Consensus        85 g~id~lv~~Ag~~~----------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 GRLDILVNNAGVNN----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             SCCCEEEECCCCCC----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCC----------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            99999999999642          246899999999999999999999997653   68999999999998888999999


Q ss_pred             HHHHHHHHHHHHH--HHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH-------HHHHHHhccccCCCCCCHHHHHHHH
Q 044670          153 VSKYGIIALVKIL--AAELRQYGLRVNCVSPYGLVSGISSRNSINPAI-------LEAFLSEMGNLRGQVLNAEGIANAA  223 (302)
Q Consensus       153 ~sK~a~~~~~~~l--a~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~dva~~~  223 (302)
                      +||++++.+++.+  +.|++++||+||+|+||++.|++..... ....       ........  +..++++|+|+|+++
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dvA~~v  231 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE-KEENMGQYIEYKDHIKDMI--KYYGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG-CHHHHGGGGGGHHHHHHHH--HHHCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccc-cccccchhhhHHHHHHHHh--ccccCCCHHHHHHHH
Confidence            9999999999995  6889999999999999999999764321 1111       11111111  113478999999999


Q ss_pred             HHhccCCCCCccccEEeeCCCcccCCCCc
Q 044670          224 LYLATDEASDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       224 ~~l~s~~~~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      ++++++.  .++|+++.++||......++
T Consensus       232 ~~l~s~~--~~~G~~~~v~gg~~~~~~~~  258 (267)
T 2gdz_A          232 ITLIEDD--ALNGAIMKITTSKGIHFQDY  258 (267)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTEEEECCC
T ss_pred             HHHhcCc--CCCCcEEEecCCCcccccCc
Confidence            9999865  48999999999977554443

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.1e-39  Score=277.74  Aligned_cols=225  Identities=27%  Similarity=0.368  Sum_probs=191.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+|++|||||+||||++++++|+++|++|++++|+.+..+.+.+.+. ++.++.+|++|+++++++++++.+.++++|+|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE-GALPLPGDVREEGDWARAVAAMEEAFGELSAL   82 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-hceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            46899999999999999999999999999999999887777766654 67889999999999999999999999999999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |||||....  .++.+.+.++|++.+++|+.+++++++.+++.|.+++.++||++||..+..+.++...|++||++++.+
T Consensus        83 i~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  160 (234)
T 2ehd_A           83 VNNAGVGVM--KPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGL  160 (234)
T ss_dssp             EECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHH
Confidence            999998653  467778999999999999999999999999999887789999999999988888999999999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEee
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~  241 (302)
                      ++.++.|+.++||++++|+||++.|++....   +.   .+        . ..+|+|+|++++++++++..+++|+++..
T Consensus       161 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~---~~--------~-~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          161 AGAAMLDLREANVRVVNVLPGSVDTGFAGNT---PG---QA--------W-KLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             HHHHHHHHGGGTEEEEEEECC-------------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             HHHHHHHHhhcCcEEEEEEeCCCcCCccccc---cc---cc--------C-CCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence            9999999999999999999999999876431   10   00        1 46999999999999998888999998766


Q ss_pred             CCC
Q 044670          242 DGG  244 (302)
Q Consensus       242 ~gG  244 (302)
                      ++.
T Consensus       226 ~~~  228 (234)
T 2ehd_A          226 PTR  228 (234)
T ss_dssp             C--
T ss_pred             ecC
Confidence            554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-41  Score=288.70  Aligned_cols=223  Identities=17%  Similarity=0.186  Sum_probs=193.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+...       ....++.+|++|+++++++++++.+++  +++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i   73 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   73 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999999999999876532       235678899999999999999999999  799


Q ss_pred             cEEEEcccCCCCCCCCC-CCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASV-LDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |+||||||....  .++ .+.+.++|++++++|+.++++++++++|.|.+  .++||++||.++..+.++...|++||++
T Consensus        74 d~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a  149 (236)
T 1ooe_A           74 DGVFCVAGGWAG--GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAA  149 (236)
T ss_dssp             EEEEECCCCCCC--BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             CEEEECCcccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHH
Confidence            999999998654  455 67788999999999999999999999999964  5899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH-HhccCCCCCc
Q 044670          158 IIALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL-YLATDEASDV  234 (302)
Q Consensus       158 ~~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~  234 (302)
                      ++.+++.++.|++  ++||+||+|+||+++|++.......           .. ..+..+++|+|++++ +++++...++
T Consensus       150 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-----------~~-~~~~~~~~dvA~~i~~~l~s~~~~~~  217 (236)
T 1ooe_A          150 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN-----------AD-HSSWTPLSFISEHLLKWTTETSSRPS  217 (236)
T ss_dssp             HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT-----------CC-GGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred             HHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC-----------cc-ccccCCHHHHHHHHHHHHcCCCcccc
Confidence            9999999999998  8999999999999999875321100           00 134678999999998 5558888899


Q ss_pred             cccEEeeCCCcc
Q 044670          235 TGLNLVVDGGFS  246 (302)
Q Consensus       235 ~G~~~~~~gG~~  246 (302)
                      +|+.+.+|||..
T Consensus       218 ~G~~~~v~gg~~  229 (236)
T 1ooe_A          218 SGALLKITTENG  229 (236)
T ss_dssp             TTCEEEEEEETT
T ss_pred             cccEEEEecCCC
Confidence            999999999964

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.1e-40  Score=291.75  Aligned_cols=226  Identities=28%  Similarity=0.435  Sum_probs=191.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.+..+++.+.+   +.++.++.+|++|+++++++++++.+.+++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999999999999998877766554   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      +|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.+++ .++||++||.++..+.++...|++||+
T Consensus       109 id~lvnnAg~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  186 (301)
T 3tjr_A          109 VDVVFSNAGIVVA--GPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKY  186 (301)
T ss_dssp             CSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCcCCC--CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHH
Confidence            9999999998764  5778889999999999999999999999999998765 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHH-----HHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAIL-----EAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~-----~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +++.+++.++.|++++||+|++|+||+|.|++......  .....     ....... +....+++|+|+|++++.++..
T Consensus       187 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pedvA~~i~~~l~~  265 (301)
T 3tjr_A          187 GVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPL-PTQDESVSADDVARLTADAILA  265 (301)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhcccc-ccccCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998653210  00000     0000011 1114578999999999998854

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=7.7e-41  Score=320.35  Aligned_cols=227  Identities=28%  Similarity=0.427  Sum_probs=195.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc---------cHHHHHHHHh---CCCeEEEEecCCCHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD---------NLGQALACKL---GEDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---------~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.         +.++++.+++   +..   ..+|++|.+++++++
T Consensus         6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---~~~d~~d~~~~~~~v   82 (604)
T 2et6_A            6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---AVADYNNVLDGDKIV   82 (604)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---EEEECCCTTCHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---EEEEcCCHHHHHHHH
Confidence            4799999999999999999999999999999998764         5555554444   222   236999998899999


Q ss_pred             HHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC
Q 044670           69 DTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS  148 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~  148 (302)
                      +++.+++|++|+||||||+...  .++.+.+.++|+++|++|+.|+++++++++|+|++++.|+||++||.++..+.++.
T Consensus        83 ~~~~~~~G~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~  160 (604)
T 2et6_A           83 ETAVKNFGTVHVIINNAGILRD--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQ  160 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTB
T ss_pred             HHHHHHcCCCCEEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCc
Confidence            9999999999999999998754  57888999999999999999999999999999988778999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||+|+.+|+++++.|++++||+||+|+|| +.|++..... .++.            ....+|+|+|.+++||++
T Consensus       161 ~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~-~~~~------------~~~~~pe~vA~~v~~L~s  226 (604)
T 2et6_A          161 ANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM-PPPM------------LEKLGPEKVAPLVLYLSS  226 (604)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS-CHHH------------HTTCSHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC-Chhh------------hccCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999997 6787654321 1111            124689999999999999


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +. .++||+++.+|||+..
T Consensus       227 ~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          227 AE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             SS-CCCCSCEEEEETTEEE
T ss_pred             Cc-ccCCCCEEEECCCeEE
Confidence            88 8999999999999763

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-39  Score=278.85  Aligned_cols=230  Identities=30%  Similarity=0.384  Sum_probs=195.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+|++|||||++|||++++++|+++|++|++++|+.+ .        .++.++.+|++|+++++++++++ ++++++|++
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~--------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~l   70 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G--------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFAV   70 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S--------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c--------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceEE
Confidence            3789999999999999999999999999999999876 1        34588999999999999999999 888999999


Q ss_pred             EEcccCCCCCCCCCCCC----CHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---C---CEEEEEcCcccccCCCCChhH
Q 044670           82 YNNAGIVDRGFASVLDT----PKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---K---GCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      |||||....  .++.+.    +.++|++++++|+.+++++++++.+.|.+++   .   ++||++||..+..+.++...|
T Consensus        71 i~~ag~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y  148 (242)
T 1uay_A           71 VSAAGVGLA--EKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  148 (242)
T ss_dssp             EECCCCCCC--CCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             EEcccccCc--ccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence            999998653  233333    3459999999999999999999999997654   3   499999999999888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||++++.+++.++.|++++||++++|+||+++|++....  .+.....+.... +..+++.+++|+|+++++++++  
T Consensus       149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~dva~~~~~l~~~--  223 (242)
T 1uay_A          149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQV-PFPPRLGRPEEYAALVLHILEN--  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTC-CSSCSCCCHHHHHHHHHHHHHC--
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhC-CCcccCCCHHHHHHHHHHHhcC--
Confidence            99999999999999999999999999999999999987643  233333332222 2216789999999999999976  


Q ss_pred             CCccccEEeeCCCcccC
Q 044670          232 SDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~  248 (302)
                      .+++|+.+.+|||+.+.
T Consensus       224 ~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCCCCcEEEEcCCeecC
Confidence            67899999999998754

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-40  Score=282.25  Aligned_cols=225  Identities=16%  Similarity=0.213  Sum_probs=191.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--   76 (302)
                      |++|++|||||++|||++++++|+++|  ++|++++|+.+..+.+.+..+.++.++.+|++|+++++++++++.++++  
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999  9999999998776655332245789999999999999999999999998  


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------C-----CCEEEEEcCcccccCC
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------H-----KGCILFTASACTEIAG  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~~sS~~~~~~~  145 (302)
                      ++|+||||||.... ..++.+.+.+++++.+++|+.+++++++++++.|.++      +     .++||++||..+..+.
T Consensus        81 ~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  159 (250)
T 1yo6_A           81 GLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence            89999999998751 2567788899999999999999999999999998765      4     7899999999887765


Q ss_pred             -------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHH
Q 044670          146 -------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEG  218 (302)
Q Consensus       146 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (302)
                             ++...|++||++++.+++.++.|+.++||++++|+||+|.|++...                   ..+.+++|
T Consensus       160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~~~~  220 (250)
T 1yo6_A          160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-------------------NAALTVEQ  220 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HH
T ss_pred             cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------------CCCCCHHH
Confidence                   5778999999999999999999999999999999999999998642                   12568999


Q ss_pred             HHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          219 IANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       219 va~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +|+.+++++++...+++|+.+.+|||.
T Consensus       221 ~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          221 STAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHhcccccCCCeEEEECCcC
Confidence            999999999887778999999999984

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=4e-41  Score=299.83  Aligned_cols=245  Identities=23%  Similarity=0.243  Sum_probs=167.4

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCc-----------cHHHH-----------HHHHhCC------C
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQD-----------NLGQA-----------LACKLGE------D   50 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~-----------~~~~~-----------~~~~~~~------~   50 (302)
                      |+||++|||||  ++|||++++++|+++|++|++++|++           ++.++           +.+++..      .
T Consensus         7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (319)
T 2ptg_A            7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVF   86 (319)
T ss_dssp             CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CC
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccc
Confidence            47899999999  89999999999999999999998752           11111           1111110      0


Q ss_pred             eEEEEec------------CCC--------HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHH
Q 044670           51 VCYIHCD------------VTS--------EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVN  110 (302)
Q Consensus        51 ~~~~~~D------------l~~--------~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n  110 (302)
                      ..++.+|            ++|        +++++++++++.++++++|+||||||+......++.+.+.++|++++++|
T Consensus        87 ~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN  166 (319)
T 2ptg_A           87 DKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSS  166 (319)
T ss_dssp             SEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHh
Confidence            2444444            232        45899999999999999999999999753112577888999999999999


Q ss_pred             hhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC-hhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCc
Q 044670          111 TTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-PAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGI  188 (302)
Q Consensus       111 ~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~  188 (302)
                      +.++++++++++|+|.+  .|+||++||.++..+.+++ ..|++||++++.|++.++.|+++ +||+||+|+||+|.|++
T Consensus       167 ~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~  244 (319)
T 2ptg_A          167 SYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA  244 (319)
T ss_dssp             THHHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred             hHHHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence            99999999999999965  3899999999998888887 68999999999999999999985 89999999999999998


Q ss_pred             ccCCCCC--HHHHHHH---HHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          189 SSRNSIN--PAILEAF---LSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       189 ~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      .......  +......   .... .+.+++.+|+|+|++++||+++...+++|+++.+|||+.+.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~~  308 (319)
T 2ptg_A          245 ASAIGKAGDKTFIDLAIDYSEAN-APLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHAM  308 (319)
T ss_dssp             -----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTTC
T ss_pred             hhhcccccchhhHHHHHHHHhcc-CCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCceee
Confidence            6543210  1111111   1111 23378999999999999999998899999999999997653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.1e-40  Score=316.15  Aligned_cols=228  Identities=29%  Similarity=0.436  Sum_probs=192.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||++|||++++++|+++|++|++.+|... ...+.....+.++..+.+|++  ++++++++++.+++|++|
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iD  397 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKYGTID  397 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHHSCCC
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999986432 222222233556666777773  556788999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||+...  .++.+.+.++|+++|++|+.|+++++++++|+|++++.|+||++||.++..+.++...|++||+|+.
T Consensus       398 iLVnNAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~  475 (604)
T 2et6_A          398 ILVNNAGILRD--RSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGIL  475 (604)
T ss_dssp             EEEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHH
Confidence            99999998754  5788899999999999999999999999999998877899999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      +|+++++.|++++||+||+|+||. .|++.....  +.       .    ..+..+|+|+|++++||+++... +||++|
T Consensus       476 ~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~--~~-------~----~~~~~~pe~vA~~v~~L~s~~~~-itG~~~  540 (604)
T 2et6_A          476 GLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIM--RE-------Q----DKNLYHADQVAPLLVYLGTDDVP-VTGETF  540 (604)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECC-CCCC----------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCEE
T ss_pred             HHHHHHHHHhCccCeEEEEEcCCC-CCccccccC--ch-------h----hccCCCHHHHHHHHHHHhCCccC-CCCcEE
Confidence            999999999999999999999995 888764321  00       0    02356999999999999998888 999999


Q ss_pred             eeCCCccc
Q 044670          240 VVDGGFSV  247 (302)
Q Consensus       240 ~~~gG~~~  247 (302)
                      .+|||+..
T Consensus       541 ~vdGG~~~  548 (604)
T 2et6_A          541 EIGGGWIG  548 (604)
T ss_dssp             EEETTEEE
T ss_pred             EECCCeeE
Confidence            99999764

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.6e-39  Score=289.33  Aligned_cols=228  Identities=24%  Similarity=0.368  Sum_probs=185.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CC--CeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GE--DVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++||++|||||+||||++++++|+++|++|++++|+.++.+++.+.+   +.  ++.++.+|++|+++++++++++.+.+
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            46899999999999999999999999999999999998877766554   22  78999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEcCcccccCCCCCh
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTASACTEIAGIGSP  149 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~sS~~~~~~~~~~~  149 (302)
                      +++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|.|.++      +.|+||++||.++..+.+++.
T Consensus        86 g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~  163 (319)
T 3ioy_A           86 GPVSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPG  163 (319)
T ss_dssp             CCEEEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSH
T ss_pred             CCCCEEEECCCcCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCH
Confidence            999999999998764  578888999999999999999999999999999754      578999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH--------HHhccccCCCCCCHHHHHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF--------LSEMGNLRGQVLNAEGIAN  221 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~dva~  221 (302)
                      .|++||+|++.|++.++.|+.++||+|++|+||+|.|++.......+......        ...........++|+++|+
T Consensus       164 ~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~  243 (319)
T 3ioy_A          164 IYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGA  243 (319)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHHHH
Confidence            99999999999999999999999999999999999999876543222211111        1111111112379999999


Q ss_pred             HHHHhccCC
Q 044670          222 AALYLATDE  230 (302)
Q Consensus       222 ~~~~l~s~~  230 (302)
                      .++.++...
T Consensus       244 ~~~~al~~~  252 (319)
T 3ioy_A          244 RVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHHcC
Confidence            999988653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=5.6e-40  Score=294.52  Aligned_cols=241  Identities=16%  Similarity=0.099  Sum_probs=199.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHH---------------HHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLG---------------QALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      .+|++|||||++|||++++++|++ +|++|++++|+.+..               .+..+..+..+..+.+|++|+++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            489999999999999999999999 999999998865431               2223344677889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCC-----------CCCCC---------------------CCCCHHHHHHHHHHHhhH
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDR-----------GFASV---------------------LDTPKSDLDRVLAVNTTG  113 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~~  113 (302)
                      ++++++.+++|++|+||||||....           ...++                     .+.+.++|++++++|..+
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~  205 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE  205 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence            9999999999999999999997410           12344                     678999999999999999


Q ss_pred             HH-HHHHHHHHh-hccCCCCEEEEEcCcccccCCCCC--hhHHHHHHHHHHHHHHHHHHHCCC-CcEEEEEeCCcccCCc
Q 044670          114 GF-LGAKHAARV-MIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGIIALVKILAAELRQY-GLRVNCVSPYGLVSGI  188 (302)
Q Consensus       114 ~~-~l~~~~~~~-l~~~~~~~iv~~sS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~-gi~v~~v~PG~v~t~~  188 (302)
                      .| ++++++.+. |.+ +.|+||++||.++..+.+.+  .+|++||++++.++|+++.||+++ |||||+|+||.|.|++
T Consensus       206 ~~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          206 DWQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             HHHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            98 788887754 443 46899999999999988887  999999999999999999999999 9999999999999998


Q ss_pred             ccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCC
Q 044670          189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANP  250 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~  250 (302)
                      .......+.......+    ++++..++|||++++.||+++   +++|+.+.+|++..+...
T Consensus       285 s~~ip~~p~y~~~l~~----~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~d  339 (405)
T 3zu3_A          285 SSAIPMMPLYLSLLFK----VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRAD  339 (405)
T ss_dssp             HHTSTTHHHHHHHHHH----HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEECC
T ss_pred             hhcCCCCcHHHHHHHH----HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCCc
Confidence            7655433322222222    237789999999999999987   567888889998665543

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4.5e-39  Score=281.26  Aligned_cols=237  Identities=24%  Similarity=0.327  Sum_probs=197.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.+..+.+.+.+     +.++.++.+|++|+++++++++++.+.+
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999987776655543     2457889999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCC--CEEEEEcCcccc--cCCCCChhH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHK--GCILFTASACTE--IAGIGSPAY  151 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~iv~~sS~~~~--~~~~~~~~Y  151 (302)
                      +++|+||||||....  .++.+.+.++|++.+++|+.+++++++.+++.|.+++.  ++||++||..+.  .+.++...|
T Consensus       110 g~iD~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y  187 (279)
T 1xg5_A          110 SGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  187 (279)
T ss_dssp             CCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             CCCCEEEECCCCCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchh
Confidence            999999999998654  46777889999999999999999999999999987653  899999999887  566777899


Q ss_pred             HHHHHHHHHHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          152 TVSKYGIIALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ++||++++.+++.++.|+.  +.||++++|+||+|.|++..... ..+..   ..... +. .++.+++|+|++++++++
T Consensus       188 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~-~~-~~~~~~~dvA~~i~~l~~  262 (279)
T 1xg5_A          188 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK---AAATY-EQ-MKCLKPEDVAEAVIYVLS  262 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH---HHHHH-C----CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhH---Hhhhc-cc-ccCCCHHHHHHHHHHHhc
Confidence            9999999999999999998  88999999999999999853211 11211   11111 22 568899999999999999


Q ss_pred             CCCCCccccEEeeCCC
Q 044670          229 DEASDVTGLNLVVDGG  244 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG  244 (302)
                      ++..+.+|++...++|
T Consensus       263 ~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          263 TPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             SCTTEEEEEEEEEETT
T ss_pred             CCcceEeeeEEEccCC
Confidence            8777777866554443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.2e-40  Score=284.30  Aligned_cols=220  Identities=18%  Similarity=0.212  Sum_probs=193.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|++|||||++|||++++++|+++|++|++++|+.+...         ...+.+|++|+++++++++++.++++++|+||
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~---------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li   92 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA---------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV   92 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            789999999999999999999999999999999877532         24578999999999999999999999999999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV  162 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (302)
                      ||||+.... .+..+.+.++|++++++|+.+++++++++++.|.+  .++||++||.++..+.++...|++||++++.++
T Consensus        93 ~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~  169 (251)
T 3orf_A           93 CAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHHII  169 (251)
T ss_dssp             ECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHH
T ss_pred             ECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHHHH
Confidence            999987542 23667788999999999999999999999999965  589999999999999999999999999999999


Q ss_pred             HHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC-CCCCccccEE
Q 044670          163 KILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD-EASDVTGLNL  239 (302)
Q Consensus       163 ~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-~~~~~~G~~~  239 (302)
                      +.++.|++  ++||+||+|+||+|.|++.....          ..  .+.+++.+|+|+|+++++++++ ...+++|+.+
T Consensus       170 ~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~----------~~--~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i  237 (251)
T 3orf_A          170 KDLASENGGLPAGSTSLGILPVTLDTPTNRKYM----------SD--ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSLV  237 (251)
T ss_dssp             HHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC----------TT--SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHhcccCCCcEEEEEecCcCcCcchhhhc----------cc--ccccccCCHHHHHHHHHHHhcCccccCCcceEE
Confidence            99999987  88999999999999998753211          11  1226688999999999999998 8889999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+++|..
T Consensus       238 ~v~~g~~  244 (251)
T 3orf_A          238 KFETKSK  244 (251)
T ss_dssp             EEEEETT
T ss_pred             EEecCCc
Confidence            9988754

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=5.4e-40  Score=283.25  Aligned_cols=228  Identities=20%  Similarity=0.195  Sum_probs=190.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCcc--HHHHHHHHh-CCCeEEEEecCCCH-HHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDN--LGQALACKL-GEDVCYIHCDVTSE-DEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   75 (302)
                      |+||+++||||++|||++++++|+++|++ |++++|+.+  ..+++.+.. +.++.++.+|++|+ ++++++++++.+++
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc
Confidence            57999999999999999999999999996 999999874  333443333 34688999999998 99999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|+||||||..          +.++|++++++|+.++++++++++|.|.+++   .++||++||.++..+.++...|+
T Consensus        83 g~id~lv~~Ag~~----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  152 (254)
T 1sby_A           83 KTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             SCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             CCCCEEEECCccC----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHH
Confidence            9999999999963          2357899999999999999999999997653   58999999999999989999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +||++++.+++.++.++.++||+||+|+||+|.|++.......   ..........     ..+.+|+|+|++++++++ 
T Consensus       153 ~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dvA~~i~~~~~-  226 (254)
T 1sby_A          153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS-----HPTQTSEQCGQNFVKAIE-  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT-----SCCEEHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc-----CCCCCHHHHHHHHHHHHH-
Confidence            9999999999999999987899999999999999986542110   1112222211     124589999999999985 


Q ss_pred             CCCCccccEEeeCCCcc
Q 044670          230 EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~  246 (302)
                        .+.+|+++.+|||..
T Consensus       227 --~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          227 --ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             --HCCTTCEEEEETTEE
T ss_pred             --cCCCCCEEEEeCCce
Confidence              467899999999963

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=1.3e-40  Score=301.29  Aligned_cols=244  Identities=15%  Similarity=0.061  Sum_probs=196.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHH---------------HHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLG---------------QALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      .+|++|||||++|||++++++|++ +|++|++++|+.+..               .+..+..+.++..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            489999999999999999999999 999999999875432               1233444677889999999999999


Q ss_pred             HHHHHHHHHc-CCccEEEEcccCCC-----------CCCCCC---------------------CCCCHHHHHHHHHHHhh
Q 044670           66 NLVDTAVAKY-GKLDIMYNNAGIVD-----------RGFASV---------------------LDTPKSDLDRVLAVNTT  112 (302)
Q Consensus        66 ~~~~~~~~~~-~~id~lv~~Ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~~  112 (302)
                      ++++++.+++ |++|+||||||...           ....++                     .+.+.++|++++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 99999999999720           011233                     36789999999999999


Q ss_pred             HHH-HHHHHHHHhhccCCCCEEEEEcCcccccCCCCC--hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc
Q 044670          113 GGF-LGAKHAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS  189 (302)
Q Consensus       113 ~~~-~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  189 (302)
                      +.| .+++++.+.+..++.|+||++||.++..+.+.+  .+|++||+++++|+++++.|++++|||||+|+||+|.|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            987 788888765433346899999999998877766  89999999999999999999999999999999999999998


Q ss_pred             cCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc-ccEEeeCCCcccCCC
Q 044670          190 SRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT-GLNLVVDGGFSVANP  250 (302)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~-G~~~~~~gG~~~~~~  250 (302)
                      ......+........    ++++.+.||||++++.||+++.- |.+ |+...+|++..++..
T Consensus       300 ~~ip~~~~~~~~~~~----~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~d  356 (422)
T 3s8m_A          300 AAIPVMPLYISMVYK----IMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRLD  356 (422)
T ss_dssp             GGSTHHHHHHHHHHH----HHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEESC
T ss_pred             hcCCCChHHHHHHHh----hhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCccc
Confidence            654322222222211    23779999999999999998743 554 776668888766433

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=6.3e-40  Score=315.10  Aligned_cols=231  Identities=27%  Similarity=0.396  Sum_probs=183.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec---------CccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV---------QDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|         +.+..+.+.+++........+|++|.++++++++++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999987         555555555544211112347999999999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      .++++++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|
T Consensus        97 ~~~~g~iDiLVnnAGi~~~--~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y  174 (613)
T 3oml_A           97 IKAFGRVDILVNNAGILRD--RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNY  174 (613)
T ss_dssp             --------CEECCCCCCCC--CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHCCCCcEEEECCCCCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHH
Confidence            9999999999999998765  57888999999999999999999999999999998888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||+|++.|++.++.|++++||+||+|+||.+ |++..... .+..            .+..+|+|+|++++||+++. 
T Consensus       175 ~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~-~~~~------------~~~~~pedvA~~v~~L~s~~-  239 (613)
T 3oml_A          175 TAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL-PDIL------------FNELKPKLIAPVVAYLCHES-  239 (613)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC-CHHH------------HTTCCGGGTHHHHHHTTSTT-
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc-chhh------------hhcCCHHHHHHHHHHhcCCC-
Confidence            999999999999999999999999999999975 56554332 1111            23568999999999999987 


Q ss_pred             CCccccEEeeCCCcccC
Q 044670          232 SDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~  248 (302)
                      .+++|+++.+|||+...
T Consensus       240 ~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          240 CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             CCCCSCEEEEETTEEEE
T ss_pred             cCCCceEEEECCCeEEE
Confidence            88999999999998853

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-38  Score=284.30  Aligned_cols=228  Identities=18%  Similarity=0.229  Sum_probs=179.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-----cHHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-----NLGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |++|++|||||++|||++++++|+++|++|++++|+.     +..+.+.+   ..+.++.++.+|++|+++++++++++.
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999988762     33333332   235789999999999999999999999


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-CCCChhH
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-GIGSPAY  151 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-~~~~~~Y  151 (302)
                      +++|++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++... .++...|
T Consensus        83 ~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  160 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHMVF--GPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPY  160 (324)
T ss_dssp             HHHSCCSEEEECCCCCBC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHH
T ss_pred             HHcCCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhH
Confidence            999999999999998754  5788899999999999999999999999999998888899999999988744 4667899


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--C--CCHHHHHHH------------HHhccccCCCCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--S--INPAILEAF------------LSEMGNLRGQVLN  215 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~--~~~~~~~~~------------~~~~~~~~~~~~~  215 (302)
                      ++||++++.++++++.|++++||+|++|+||++.|++....  .  ........+            ......+.....+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD  240 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999999999999999999998764321  1  111111111            1111111123467


Q ss_pred             HHHHHHHHHHhccCC
Q 044670          216 AEGIANAALYLATDE  230 (302)
Q Consensus       216 ~~dva~~~~~l~s~~  230 (302)
                      |+++|++++.++..+
T Consensus       241 p~~vA~aiv~~~~~~  255 (324)
T 3u9l_A          241 VSLVADAIVRVVGTA  255 (324)
T ss_dssp             THHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHhcCC
Confidence            888888888887543

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=7e-40  Score=282.80  Aligned_cols=221  Identities=22%  Similarity=0.268  Sum_probs=173.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||++|||++++++|+++|++|++++|+++..+.         . +.+|++|+++++++++++   ++++|+|||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv~   68 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------D-LSTAEGRKQAIADVLAKC---SKGMDGLVL   68 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------C-TTSHHHHHHHHHHHHTTC---TTCCSEEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------c-cccCCCCHHHHHHHHHHh---CCCCCEEEE
Confidence            689999999999999999999999999999998764321         1 678999999988877633   378999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc---------------------
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE---------------------  142 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~---------------------  142 (302)
                      |||....    .     +.|++++++|+.++++++++++|.|.+++.++||++||.++.                     
T Consensus        69 ~Ag~~~~----~-----~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (257)
T 1fjh_A           69 CAGLGPQ----T-----KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKA  139 (257)
T ss_dssp             CCCCCTT----C-----SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHH
T ss_pred             CCCCCCC----c-----ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhh
Confidence            9997541    1     138999999999999999999999988778999999999887                     


Q ss_pred             -------cCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCC
Q 044670          143 -------IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLN  215 (302)
Q Consensus       143 -------~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (302)
                             .+.++...|++||++++.+++.++.|++++||+||+|+||+|.|++...... .............+.+++.+
T Consensus       140 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  218 (257)
T 1fjh_A          140 RAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFVPPMGRRAE  218 (257)
T ss_dssp             HHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCSTTSCCC
T ss_pred             hhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc-chhHHHHHHhcccccCCCCC
Confidence                   3444677999999999999999999999999999999999999998754311 11112222221223377999


Q ss_pred             HHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |+|+|++++++++++..+++|+.+.+|||..+
T Consensus       219 ~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          219 PSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             THHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            99999999999998888999999999999764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=4.8e-38  Score=272.79  Aligned_cols=225  Identities=19%  Similarity=0.198  Sum_probs=196.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC---CEEEEEecCccHHHHHHH--HhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG---AKVVIADVQDNLGQALAC--KLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+.+  ..+.++.++.+|++|+++++++++++.+.+
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            478999999999999999999999999   999999998765443322  124678999999999999999999999999


Q ss_pred             C--CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------C-----CCEEEEEcCcccc
Q 044670           76 G--KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------H-----KGCILFTASACTE  142 (302)
Q Consensus        76 ~--~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~iv~~sS~~~~  142 (302)
                      +  ++|+||||||.... ..++.+.+.+++++++++|+.+++++++++++.|.++      +     .++||++||..+.
T Consensus        99 g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~  177 (267)
T 1sny_A           99 KDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS  177 (267)
T ss_dssp             GGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred             CCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence            8  89999999998652 1467778899999999999999999999999998754      3     5899999999887


Q ss_pred             cCCC---CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHH
Q 044670          143 IAGI---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGI  219 (302)
Q Consensus       143 ~~~~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  219 (302)
                      .+.+   +...|++||++++.+++.++.|+.++||++++|+||+|.|++...                   ....+|+++
T Consensus       178 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------------------~~~~~~~~~  238 (267)
T 1sny_A          178 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------------SAPLDVPTS  238 (267)
T ss_dssp             STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------------TCSBCHHHH
T ss_pred             ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------------CCCCCHHHH
Confidence            7653   678999999999999999999999999999999999999998642                   125689999


Q ss_pred             HHHHHHhccCCCCCccccEEeeCCCc
Q 044670          220 ANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       220 a~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      |+.++++++.....++|+.+.+||+.
T Consensus       239 a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          239 TGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            99999999877778899999999975

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=6.2e-38  Score=277.50  Aligned_cols=217  Identities=25%  Similarity=0.303  Sum_probs=183.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCH-HHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSE-DEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   75 (302)
                      +++|++|||||++|||++++++|+++|++|++++|+.++.++..+++    +.++.++.+|++|+ ++++++++.+.+++
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999999998877666554    35789999999998 99999999999999


Q ss_pred             CCccEEEEcccCCCC----------------------------CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc
Q 044670           76 GKLDIMYNNAGIVDR----------------------------GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP  127 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~----------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~  127 (302)
                      +++|+||||||+...                            ...++.+.+.+++++++++|+.|+++++++++|.|.+
T Consensus        90 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~  169 (311)
T 3o26_A           90 GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQL  169 (311)
T ss_dssp             SSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhcc
Confidence            999999999998642                            1124456788999999999999999999999999988


Q ss_pred             CCCCEEEEEcCcccccCC-------------------------------------------CCChhHHHHHHHHHHHHHH
Q 044670          128 QHKGCILFTASACTEIAG-------------------------------------------IGSPAYTVSKYGIIALVKI  164 (302)
Q Consensus       128 ~~~~~iv~~sS~~~~~~~-------------------------------------------~~~~~Y~~sK~a~~~~~~~  164 (302)
                      ++.++||++||.++..+.                                           ++...|++||++++++++.
T Consensus       170 ~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~  249 (311)
T 3o26_A          170 SDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV  249 (311)
T ss_dssp             SSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence            888999999998876543                                           3557899999999999999


Q ss_pred             HHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       165 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      ++.|+.+  |+||+|+||+|.|++....                   ...+++++++.+++++..+....+|..
T Consensus       250 la~e~~~--i~v~~v~PG~v~T~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~g~~  302 (311)
T 3o26_A          250 LANKIPK--FQVNCVCPGLVKTEMNYGI-------------------GNYTAEEGAEHVVRIALFPDDGPSGFF  302 (311)
T ss_dssp             HHHHCTT--SEEEEECCCSBCSGGGTTC-------------------CSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred             HHhhcCC--ceEEEecCCceecCCcCCC-------------------CCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence            9999864  9999999999999986542                   135899999999999865444334433

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=4e-39  Score=287.70  Aligned_cols=233  Identities=18%  Similarity=0.152  Sum_probs=182.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH---HHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG---QALACKL------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      ++|++|||||++|||++++++|+++|++|++++|+....   ....+..      +.++.++.+|++|+++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            589999999999999999999999999998887754332   2222222      3578999999999999999999873


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                        ++++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++||++||.++..+.++...|+
T Consensus        81 --~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  156 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYC  156 (327)
T ss_dssp             --TSCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cCCCCEEEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHH
Confidence              5789999999998653  467788999999999999999999999999999877789999999999999889999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH---------HH---HHHHHHhccccCCCC-CCHHHH
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP---------AI---LEAFLSEMGNLRGQV-LNAEGI  219 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~---------~~---~~~~~~~~~~~~~~~-~~~~dv  219 (302)
                      +||++++.|++.++.|++++||+||+|+||+|.|++........         ..   ...+......+.+++ .+|+|+
T Consensus       157 aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedv  236 (327)
T 1jtv_A          157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEV  236 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHH
Confidence            99999999999999999999999999999999999875432211         10   111111100111233 589999


Q ss_pred             HHHHHHhccCC---CCCccccE
Q 044670          220 ANAALYLATDE---ASDVTGLN  238 (302)
Q Consensus       220 a~~~~~l~s~~---~~~~~G~~  238 (302)
                      |++++++++..   ..+++|+.
T Consensus       237 A~~i~~l~~~~~~~~~~~tg~~  258 (327)
T 1jtv_A          237 AEVFLTALRAPKPTLRYFTTER  258 (327)
T ss_dssp             HHHHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHHHcCCCCCeEEEeCch
Confidence            99999998743   34555543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-38  Score=273.53  Aligned_cols=214  Identities=25%  Similarity=0.371  Sum_probs=188.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|++|||||+||||++++++|+++|++|++++|+.+..+++.+++   +.++.++.+|++|+++++++++++.+.+++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            57899999999999999999999999999999999987776655444   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.+++++++.+++.|.+++.++||++||.++..+.++...|++||++
T Consensus       109 iD~li~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  186 (272)
T 1yb1_A          109 VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA  186 (272)
T ss_dssp             CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHH
T ss_pred             CcEEEECCCcCCC--cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHH
Confidence            9999999998654  46667788999999999999999999999999987778999999999988877788899999999


Q ss_pred             HHHHHHHHHHHHC---CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          158 IIALVKILAAELR---QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       158 ~~~~~~~la~e~~---~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++.+++.++.|+.   +.||+|++|+||++.|++....   .          .+ .+++.+|+|+|+++++++...
T Consensus       187 ~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~---~----------~~-~~~~~~~~dva~~i~~~~~~~  248 (272)
T 1yb1_A          187 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP---S----------TS-LGPTLEPEEVVNRLMHGILTE  248 (272)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT---H----------HH-HCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc---c----------cc-ccCCCCHHHHHHHHHHHHHcC
Confidence            9999999999996   6799999999999999985421   0          01 156889999999999998654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=5.6e-39  Score=275.48  Aligned_cols=223  Identities=19%  Similarity=0.180  Sum_probs=161.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|++ |++|++++|+.+..+.+.+  ..++.++.+|+++.++ .+.+.+..+.++++|+
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~id~   78 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE--IEGVEPIESDIVKEVL-EEGGVDKLKNLDHVDT   78 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT--STTEEEEECCHHHHHH-TSSSCGGGTTCSCCSE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh--hcCCcceecccchHHH-HHHHHHHHHhcCCCCE
Confidence            5799999999999999999999988 9999999999887776654  2468899999999877 4445555667789999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.++|.|.+++ ++||++||.++..+.++...|++||++++.
T Consensus        79 lv~~Ag~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~  155 (245)
T 3e9n_A           79 LVHAAAVARD--TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRG  155 (245)
T ss_dssp             EEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHH
T ss_pred             EEECCCcCCC--CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHH
Confidence            9999998764  5677788999999999999999999999999997654 899999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|++++||+||+|+||+|.|++.......      .....  +.+++.+|+|+|++++++++...   ++++++
T Consensus       156 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~------~~~~~--~~~~~~~p~dvA~~i~~l~~~~~---~~~~~~  224 (245)
T 3e9n_A          156 LADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS------QGTNF--RPEIYIEPKEIANAIRFVIDAGE---TTQITN  224 (245)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECCC------------------------CCGGGSCHHHHHHHHHHHHTSCT---TEEEEE
T ss_pred             HHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh------hhccc--ccccCCCHHHHHHHHHHHHcCCC---ccceee
Confidence            99999999999999999999999999987643211      11111  12568899999999999997654   355554


Q ss_pred             e
Q 044670          241 V  241 (302)
Q Consensus       241 ~  241 (302)
                      +
T Consensus       225 i  225 (245)
T 3e9n_A          225 V  225 (245)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.1e-37  Score=266.89  Aligned_cols=219  Identities=26%  Similarity=0.307  Sum_probs=186.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|++|||||+||||++++++|++ +|++|++++|+.+..+...+.+   +.++.++.+|++|+++++++++++.++++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 9999999999987766655544   46789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCC-HHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTP-KSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------  144 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------  144 (302)
                      ++|+||||||....   .....+ .+++++++++|+.+++++++.+++.|.+  .++||++||..+..+           
T Consensus        82 ~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~  156 (276)
T 1wma_A           82 GLDVLVNNAGIAFK---VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQK  156 (276)
T ss_dssp             SEEEEEECCCCCCC---TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             CCCEEEECCccccc---CCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhh
Confidence            99999999998653   222334 5899999999999999999999999864  479999999876532           


Q ss_pred             ------------------------------CCCChhHHHHHHHHHHHHHHHHHHHCC----CCcEEEEEeCCcccCCccc
Q 044670          145 ------------------------------GIGSPAYTVSKYGIIALVKILAAELRQ----YGLRVNCVSPYGLVSGISS  190 (302)
Q Consensus       145 ------------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~PG~v~t~~~~  190 (302)
                                                    ..+...|++||++++.+++.++.++.+    +||+|++|+||+|.|++..
T Consensus       157 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~  236 (276)
T 1wma_A          157 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  236 (276)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             ccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCC
Confidence                                          012378999999999999999999987    7999999999999999864


Q ss_pred             CCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC--CCCccccEEeeCCC
Q 044670          191 RNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE--ASDVTGLNLVVDGG  244 (302)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~--~~~~~G~~~~~~gG  244 (302)
                      .                   .++.+|+|+|++++++++.+  ..+++|+++. +++
T Consensus       237 ~-------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          237 P-------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             T-------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             c-------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence            2                   23679999999999999844  3588999886 443

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=4.4e-38  Score=286.87  Aligned_cols=243  Identities=13%  Similarity=0.058  Sum_probs=198.4

Q ss_pred             CCCEEEEeCCCChHHHH--HHHHHHHcCCEEEEEecCccH---------------HHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            2 EGKVAIITGGASGIGAA--AAKLFHENGAKVVIADVQDNL---------------GQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~--ia~~l~~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      .||++|||||++|||++  ++++|+++|++|++++|+...               ..+..+..+.++.++.+|++|++++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            58999999999999999  999999999999999986432               2223344467789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCCC-----------CCCCC---------------------CCCCHHHHHHHHHHHhh
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVDR-----------GFASV---------------------LDTPKSDLDRVLAVNTT  112 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~  112 (302)
                      +++++++.+++|++|+||||||....           ...++                     .+.+.++|++++++|..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~  218 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG  218 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence            99999999999999999999997410           01233                     45689999999999999


Q ss_pred             HHH-HHHHHHHHhhccCCCCEEEEEcCcccccCCCCC--hhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCc
Q 044670          113 GGF-LGAKHAARVMIPQHKGCILFTASACTEIAGIGS--PAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGI  188 (302)
Q Consensus       113 ~~~-~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~--~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~  188 (302)
                      +.+ .+++.+.+.+...+.++||++||.++..+.+.+  ..|++||+|++.++++|+.|+++ +||+||+|+||+|.|++
T Consensus       219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~  298 (418)
T 4eue_A          219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKA  298 (418)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHH
T ss_pred             HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChh
Confidence            988 778888876544457899999999999988888  99999999999999999999999 99999999999999998


Q ss_pred             ccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCC
Q 044670          189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANP  250 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~  250 (302)
                      .......+.........    .++..++|++++.+.+|+++  ...+|+.+.+|||..+...
T Consensus       299 s~~ip~~p~y~~~~~~~----mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~d  354 (418)
T 4eue_A          299 SAYIPTFPLYAAILYKV----MKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRMD  354 (418)
T ss_dssp             HHTSTTHHHHHHHHHHH----HHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEESC
T ss_pred             hhcCCCCcHHHHHHHHH----HhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeCC
Confidence            77654333222222221    25578999999999999986  4568999899987665433

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=9.8e-36  Score=261.02  Aligned_cols=213  Identities=18%  Similarity=0.186  Sum_probs=182.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||+||||++++++|+++|++|++++|+.+..+.+.+.+   + .++.++.+|++|+++++++++++.+.++
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            46899999999999999999999999999999999988776655443   3 3688999999999999999999999999


Q ss_pred             CccEEEEc-ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNN-AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~-Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+|||| ||...   .+..+.+.+++++++++|+.|+++++++++|.|.++ .++||++||.++..+.++...|++||
T Consensus       106 ~iD~li~naag~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  181 (286)
T 1xu9_A          106 GLDMLILNHITNTS---LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASK  181 (286)
T ss_dssp             SCSEEEECCCCCCC---CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCccCCC---CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHH
Confidence            99999999 56543   244556899999999999999999999999998654 58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH--CCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          156 YGIIALVKILAAEL--RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       156 ~a~~~~~~~la~e~--~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++++.+++.++.|+  ...||++++|+||++.|++......          ....  ....+++|+|+.++..+..
T Consensus       182 ~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~----------~~~~--~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          182 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------GIVH--MQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------GGGG--GGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc----------cccc--CCCCCHHHHHHHHHHHHhc
Confidence            99999999999999  5779999999999999987532110          0001  2367999999999988854

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=4.7e-35  Score=243.55  Aligned_cols=201  Identities=18%  Similarity=0.190  Sum_probs=174.1

Q ss_pred             CCC-EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGK-VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk-~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++| ++|||||+||||++++++|+ +|++|++++|+.+              ++.+|++|+++++++++++    +++|+
T Consensus         1 ~~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------~~~~D~~~~~~~~~~~~~~----~~~d~   61 (202)
T 3d7l_A            1 SNAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------DVTVDITNIDSIKKMYEQV----GKVDA   61 (202)
T ss_dssp             CCSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------SEECCTTCHHHHHHHHHHH----CCEEE
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------ceeeecCCHHHHHHHHHHh----CCCCE
Confidence            356 89999999999999999999 9999999999865              4789999999988888764    78999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++.+++|+.+++++++++.+.|.+  .++||++||..+..+.++...|+.||++++.
T Consensus        62 vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  137 (202)
T 3d7l_A           62 IVSATGSATF--SPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTA  137 (202)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEECCCCCCC--CChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHH
Confidence            9999997653  46777889999999999999999999999999854  3899999999998888899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      +++.++.|+ ++||++++|+||+++|++...            ... .+.+++++++|+|++++++++   .+++|+.++
T Consensus       138 ~~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~------------~~~-~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~  200 (202)
T 3d7l_A          138 FAKSAAIEM-PRGIRINTVSPNVLEESWDKL------------EPF-FEGFLPVPAAKVARAFEKSVF---GAQTGESYQ  200 (202)
T ss_dssp             HHHHHTTSC-STTCEEEEEEECCBGGGHHHH------------GGG-STTCCCBCHHHHHHHHHHHHH---SCCCSCEEE
T ss_pred             HHHHHHHHc-cCCeEEEEEecCccCCchhhh------------hhh-ccccCCCCHHHHHHHHHHhhh---ccccCceEe
Confidence            999999998 779999999999999986421            111 122668999999999988873   457899998


Q ss_pred             eC
Q 044670          241 VD  242 (302)
Q Consensus       241 ~~  242 (302)
                      +|
T Consensus       201 vd  202 (202)
T 3d7l_A          201 VY  202 (202)
T ss_dssp             EC
T ss_pred             cC
Confidence            87

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=4.6e-36  Score=258.01  Aligned_cols=222  Identities=24%  Similarity=0.257  Sum_probs=179.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||+||||++++++|+++|++|++++|+.+..+.          .+.+|++|+++++++++++   .+++|+|||
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi~   68 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------DLSTPGGRETAVAAVLDRC---GGVLDGLVC   68 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------CTTSHHHHHHHHHHHHHHH---TTCCSEEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------cccCCcccHHHHHHHHHHc---CCCccEEEE
Confidence            689999999999999999999999999999998764221          1578999999988887754   368999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------------
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------------  145 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------------  145 (302)
                      |||....         .+++++.+++|+.+++++++++.+.|.+++.++||++||..+..+.                  
T Consensus        69 ~Ag~~~~---------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  139 (255)
T 2dkn_A           69 CAGVGVT---------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARA  139 (255)
T ss_dssp             CCCCCTT---------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHH
T ss_pred             CCCCCCc---------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhh
Confidence            9997531         1247899999999999999999999987777999999999887654                  


Q ss_pred             --------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHH
Q 044670          146 --------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAE  217 (302)
Q Consensus       146 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (302)
                              ++...|+.||++++.+++.++.++.++||++++++||+++|++....... ............+.+++.+++
T Consensus       140 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  218 (255)
T 2dkn_A          140 IELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKAD-PRYGESTRRFVAPLGRGSEPR  218 (255)
T ss_dssp             HHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHC-TTTHHHHHSCCCTTSSCBCHH
T ss_pred             hhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccc-hhhHHHHHHHHHHhcCCCCHH
Confidence                    46678999999999999999999988899999999999999875432000 001111221110336799999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      |+|++++++++++..+++|+.++++||..+.
T Consensus       219 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~  249 (255)
T 2dkn_A          219 EVAEAIAFLLGPQASFIHGSVLFVDGGMDAL  249 (255)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTHHHH
T ss_pred             HHHHHHHHHhCCCcccceeeEEEecCCeEee
Confidence            9999999999877678899999999997654

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.7e-34  Score=240.92  Aligned_cols=200  Identities=23%  Similarity=0.260  Sum_probs=170.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |++|||||+||||++++++|+++  +|++++|+.+..+.+.+.++.  .++.+|++|++++++++++    ++++|+|||
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~--~~~~~D~~~~~~~~~~~~~----~~~id~vi~   72 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA--RALPADLADELEAKALLEE----AGPLDLLVH   72 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC--EECCCCTTSHHHHHHHHHH----HCSEEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC--cEEEeeCCCHHHHHHHHHh----cCCCCEEEE
Confidence            68999999999999999999999  999999998887777666644  8889999999999988876    679999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      |||....  .++.+.+.+++++.+++|+.+++++++++    .+++.++||++||..+..+.++...|++||++++.+++
T Consensus        73 ~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           73 AVGKAGR--ASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             CCCCCCC--BCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             CCCcCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            9998653  46677788899999999999999999988    23456899999999999888999999999999999999


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      .++.|++++||++++++||++.|++....              ..+.+++++++|+|++++++++.+.
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~~--------------~~~~~~~~~~~dva~~~~~~~~~~~  200 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAPL--------------GGPPKGALSPEEAARKVLEGLFREP  200 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGGG--------------TSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCcccc--------------CCCCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999874321              1122678999999999999997654

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=3.1e-35  Score=302.61  Aligned_cols=236  Identities=20%  Similarity=0.231  Sum_probs=193.7

Q ss_pred             CCCCEEEEeCCCCh-HHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASG-IGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++| ||++++++|+++|++|+++ .|+.+..++..+.+       +.++.++.+|++|.++++++++++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999998 9999999999999999998 57666655443332       457889999999999999999999


Q ss_pred             HHH-----cC-CccEEEEcccCCCCCCC-CCCCCC--HHHHHHHHHHHhhHHHHHHHHH--HHhhccCCCCEEEEEcCcc
Q 044670           72 VAK-----YG-KLDIMYNNAGIVDRGFA-SVLDTP--KSDLDRVLAVNTTGGFLGAKHA--ARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        72 ~~~-----~~-~id~lv~~Ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~~sS~~  140 (302)
                      .++     +| ++|+||||||+...  . ++.+.+  .++|+++|++|+.+++.+++.+  ++.|.+++.++||++||.+
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~a  830 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  830 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCCCC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCT
T ss_pred             HHhccccccCCCCeEEEECCCcCCC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChH
Confidence            988     66 99999999998654  4 677777  8999999999999999999988  6888776678999999998


Q ss_pred             cccCCCCChhHHHHHHHHHHH-HHHHHHHHCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCCCCCHHH
Q 044670          141 TEIAGIGSPAYTVSKYGIIAL-VKILAAELRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEG  218 (302)
Q Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (302)
                      +..+  +...|++||++++.| ++.++.+++++ |+||+|+||+|. |++......    ........ +  .+..+|+|
T Consensus       831 g~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~~~----~~~~~~~~-p--lr~~sPEE  900 (1887)
T 2uv8_A          831 GTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNI----IAEGIEKM-G--VRTFSQKE  900 (1887)
T ss_dssp             TCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----CCT----THHHHHTT-S--CCCEEHHH
T ss_pred             hccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccchh----HHHHHHhc-C--CCCCCHHH
Confidence            8776  678999999999999 89999999887 999999999999 777653211    11222222 1  25669999


Q ss_pred             HHHHHHHhccCC-CCCccccEEeeC--CCcccC
Q 044670          219 IANAALYLATDE-ASDVTGLNLVVD--GGFSVA  248 (302)
Q Consensus       219 va~~~~~l~s~~-~~~~~G~~~~~~--gG~~~~  248 (302)
                      +|.+++||+++. ..+++|+.+.+|  ||+...
T Consensus       901 VA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~  933 (1887)
T 2uv8_A          901 MAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  933 (1887)
T ss_dssp             HHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTS
T ss_pred             HHHHHHHHhCCCccccccCcEEEEECCCCeecc
Confidence            999999999987 678999999874  997654

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=4.1e-34  Score=293.74  Aligned_cols=236  Identities=17%  Similarity=0.205  Sum_probs=194.0

Q ss_pred             CCCCEEEEeCCCCh-HHHHHHHHHHHcCCEEEEEe-cCccHHHHHH----HHh---CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASG-IGAAAAKLFHENGAKVVIAD-VQDNLGQALA----CKL---GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~----~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++| ||++++++|+++|++|++++ |+.+...+..    +.+   +.++.++.+|++|.++++++++++
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            57899999999999 99999999999999999985 5555544332    333   457889999999999999999999


Q ss_pred             HHH---cC-CccEEEEcccCCCCCCC-CCCCCC--HHHHHHHHHHHhhHHHHHHHH--HHHhhccCCCCEEEEEcCcccc
Q 044670           72 VAK---YG-KLDIMYNNAGIVDRGFA-SVLDTP--KSDLDRVLAVNTTGGFLGAKH--AARVMIPQHKGCILFTASACTE  142 (302)
Q Consensus        72 ~~~---~~-~id~lv~~Ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~iv~~sS~~~~  142 (302)
                      .++   +| ++|+||||||+...  . ++.+.+  .++|+++|++|+.+++++++.  +++.|.+++.++||++||.++.
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~~~--~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~  807 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIPEN--GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT  807 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCCCT--TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS
T ss_pred             HHhhcccCCCCcEEEeCcccccC--CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc
Confidence            988   88 99999999998654  3 677888  899999999999999999987  7788877667899999999887


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHH-HHCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHH
Q 044670          143 IAGIGSPAYTVSKYGIIALVKILAA-ELRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA  220 (302)
Q Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~la~-e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (302)
                      .+  +...|++||++++.|++.++. +++++ |+||+|+||++. |++...    ........... +  -+..+|+|+|
T Consensus       808 ~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~-p--lr~~sPeEVA  877 (1878)
T 2uv9_A          808 FG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA----NNLVAEGVEKL-G--VRTFSQQEMA  877 (1878)
T ss_dssp             SS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH----HHHTHHHHHTT-T--CCCBCHHHHH
T ss_pred             cC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc----chhhHHHHHhc-C--CCCCCHHHHH
Confidence            76  467899999999999987665 47776 999999999999 988643    11222223322 1  1466999999


Q ss_pred             HHHHHhccCCC-CCccccEEee--CCCcccC
Q 044670          221 NAALYLATDEA-SDVTGLNLVV--DGGFSVA  248 (302)
Q Consensus       221 ~~~~~l~s~~~-~~~~G~~~~~--~gG~~~~  248 (302)
                      ++++||+++.. .+++|+.+.+  |||+...
T Consensus       878 ~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~  908 (1878)
T 2uv9_A          878 FNLLGLMAPAIVNLCQSDPVFADLNGGLQFI  908 (1878)
T ss_dssp             HHHHHHHSHHHHHHHTTSCEEEEESCSGGGC
T ss_pred             HHHHHHhCCcccccccCcEEEEEcCCCcccc
Confidence            99999999876 7899999886  5997654

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.7e-36  Score=298.29  Aligned_cols=236  Identities=20%  Similarity=0.217  Sum_probs=194.7

Q ss_pred             CCCCEEEEeCCCCh-HHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASG-IGAAAAKLFHENGAKVVIA-DVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++| ||++++++|+++|++|+++ +|+.+..++..+++       +.++.++.+|++|+++++++++++
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            57899999999998 9999999999999999998 57665554444443       356889999999999999999999


Q ss_pred             HHH-----cC-CccEEEEcccCCCCCCC-CCCCCC--HHHHHHHHHHHhhHHHHHHHHH--HHhhccCCCCEEEEEcCcc
Q 044670           72 VAK-----YG-KLDIMYNNAGIVDRGFA-SVLDTP--KSDLDRVLAVNTTGGFLGAKHA--ARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        72 ~~~-----~~-~id~lv~~Ag~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~iv~~sS~~  140 (302)
                      .+.     +| ++|+||||||+...  . ++.+.+  .++|++++++|+.+++.+++.+  .+.|.+++.++||++||.+
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiA  631 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIPEQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNH  631 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCCCC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCT
T ss_pred             HHhccccccCCCCeEEEECCCcCCC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChH
Confidence            988     77 89999999998654  4 677777  8999999999999999999999  7888777678999999998


Q ss_pred             cccCCCCChhHHHHHHHHHHH-HHHHHHHHCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCCCCCHHH
Q 044670          141 TEIAGIGSPAYTVSKYGIIAL-VKILAAELRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEG  218 (302)
Q Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~-~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (302)
                      +..+  +...|++||++++.| ++.++.+++++ |+||+|+||+|. |++........    ......  + .+..+|+|
T Consensus       632 G~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~e~~~----~~l~~i--p-lR~~sPEE  701 (1688)
T 2pff_A          632 GTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSANNIIA----EGIEKM--G-VRTFSQKE  701 (1688)
T ss_dssp             TTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTTTTCS----TTTSSS--S-CCCCCCCT
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCchHHH----HHHHhC--C-CCCCCHHH
Confidence            8776  678999999999999 78888888886 999999999999 67654311000    111111  1 24669999


Q ss_pred             HHHHHHHhccCC-CCCccccEEeeC--CCcccC
Q 044670          219 IANAALYLATDE-ASDVTGLNLVVD--GGFSVA  248 (302)
Q Consensus       219 va~~~~~l~s~~-~~~~~G~~~~~~--gG~~~~  248 (302)
                      +|++++||+++. ..+++|+.+.+|  ||+...
T Consensus       702 VA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~  734 (1688)
T 2pff_A          702 MAFNLLGLLTPEVVELCQKSPVMADLNGGLQFV  734 (1688)
T ss_dssp             THHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGS
T ss_pred             HHHHHHHHhCCCccccccCcEEEEEcCCCeeec
Confidence            999999999987 678999999875  997654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.98  E-value=1.5e-31  Score=252.04  Aligned_cols=215  Identities=18%  Similarity=0.184  Sum_probs=176.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEE-ecCc-------------cHHHHHHH---HhCCCeEEEEecCCCHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIA-DVQD-------------NLGQALAC---KLGEDVCYIHCDVTSEDE   63 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~-~r~~-------------~~~~~~~~---~~~~~~~~~~~Dl~~~~~   63 (302)
                      +++++|||||+||||++++++|+++|++ |+++ +|+.             +..+++.+   ..+.++.++.||++|+++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5799999999999999999999999998 6777 8873             33333333   336789999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccc
Q 044670           64 ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTE  142 (302)
Q Consensus        64 v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~  142 (302)
                      ++++++++. +++++|+||||||+...  .++.+.+.++|+++|++|+.|++++.+.+.+.+.+++ .++||++||.++.
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            999999998 78999999999999765  5788899999999999999999999999999987765 7899999999999


Q ss_pred             cCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          143 IAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       143 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      .+.++...|++||++++.|+    .+++.+||++++|+||++.|+|....    .. ...+....   ...+++++++++
T Consensus       407 ~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~~-~~~~~~~g---~~~l~pee~a~~  474 (525)
T 3qp9_A          407 WGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----AT-GERLRRLG---LRPLAPATALTA  474 (525)
T ss_dssp             TCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----HH-HHHHHHTT---BCCBCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----hh-HHHHHhcC---CCCCCHHHHHHH
Confidence            99999999999999888874    55667899999999999999887432    11 12222211   236799999999


Q ss_pred             HHHhccCCC
Q 044670          223 ALYLATDEA  231 (302)
Q Consensus       223 ~~~l~s~~~  231 (302)
                      +.++++...
T Consensus       475 l~~~l~~~~  483 (525)
T 3qp9_A          475 LDTALGHGD  483 (525)
T ss_dssp             HHHHHHHTC
T ss_pred             HHHHHhCCC
Confidence            999997543

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.96  E-value=4.5e-29  Score=232.91  Aligned_cols=211  Identities=20%  Similarity=0.286  Sum_probs=169.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCcc---HHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDN---LGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~---~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++++|||||+||||++++++|+++|+ +|++++|+..   ..+++.+   ..+.++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 7889998642   2333333   34678999999999999999999988766 


Q ss_pred             CCccEEEEcccCC-CCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           76 GKLDIMYNNAGIV-DRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        76 ~~id~lv~~Ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      +++|+||||||+. ..  .++.+.+.++|+++|++|+.|++++.+.+.+.    ..++||++||.++..+.++...|++|
T Consensus       318 g~ld~vVh~AGv~~~~--~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS~a~~~g~~g~~~YaAa  391 (496)
T 3mje_A          318 APLTAVFHSAGVAHDD--APVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSSGAAVWGSGGQPGYAAA  391 (496)
T ss_dssp             SCEEEEEECCCCCCSC--CCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEEHHHHTTCTTCHHHHHH
T ss_pred             CCCeEEEECCcccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeChHhcCCCCCcHHHHHH
Confidence            6899999999987 43  57888999999999999999999998877764    46799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      |++++.|++.++    .+||++++|+||++.+++....   ......+ ....   -..++|+++++++.+++....
T Consensus       392 Ka~ldala~~~~----~~Gi~v~sV~pG~w~~~gm~~~---~~~~~~l-~~~g---~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          392 NAYLDALAEHRR----SLGLTASSVAWGTWGEVGMATD---PEVHDRL-VRQG---VLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECEESSSCC---------CHHH-HHTT---EEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCcccCCccccC---hHHHHHH-HhcC---CCCCCHHHHHHHHHHHHcCCC
Confidence            999998887654    4699999999999987655332   1111112 1111   124689999999999886543

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.96  E-value=5.2e-29  Score=216.05  Aligned_cols=196  Identities=15%  Similarity=0.146  Sum_probs=159.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+||||||+||||++++++|+++|++|++++|++.+..      +.++.++.+|++|+++++++++       ++|+
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   67 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------GPNEECVQCDLADANAVNAMVA-------GCDG   67 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------CTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------CCCCEEEEcCCCCHHHHHHHHc-------CCCE
Confidence            67899999999999999999999999999999999876543      4578999999999999988887       7999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc------------cCCCCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE------------IAGIGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~------------~~~~~~  148 (302)
                      ||||||...          .++|++++++|+.|++++++++.+    .+.++||++||..+.            .+..+.
T Consensus        68 vi~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~  133 (267)
T 3rft_A           68 IVHLGGISV----------EKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPARPD  133 (267)
T ss_dssp             EEECCSCCS----------CCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCC
T ss_pred             EEECCCCcC----------cCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCC
Confidence            999999732          235789999999999999999966    457899999998776            233456


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|+.||++++.+++.++.++   |+++++|+||.+.++.....     ..           ..+++++|+++.+..++.
T Consensus       134 ~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~~-----~~-----------~~~~~~~d~a~~~~~~~~  194 (267)
T 3rft_A          134 GLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNYR-----ML-----------STWFSHDDFVSLIEAVFR  194 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCSTT-----HH-----------HHBCCHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCCC-----ce-----------eeEEcHHHHHHHHHHHHh
Confidence            789999999999999999884   79999999999998754321     11           226789999999998886


Q ss_pred             CCCCCccccEEeeCCC
Q 044670          229 DEASDVTGLNLVVDGG  244 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG  244 (302)
                      .+..  .+.++++.++
T Consensus       195 ~~~~--~~~~~~~~s~  208 (267)
T 3rft_A          195 APVL--GCPVVWGASA  208 (267)
T ss_dssp             CSCC--CSCEEEECCC
T ss_pred             CCCC--CceEEEEeCC
Confidence            5432  2345555444

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=8.7e-30  Score=273.48  Aligned_cols=236  Identities=19%  Similarity=0.157  Sum_probs=177.9

Q ss_pred             CCCCEEEEeCCCCh-HHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASG-IGAAAAKLFHENGAKVVIADVQDNL-----GQALACKL---GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++| ||++++++|+++|++|++++|+.+.     .+++.+++   +.++..+.+|++|+++++++++++
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            57999999999999 9999999999999999999998776     55555555   346788999999999999999999


Q ss_pred             HH----HcCCccEEEEcccCC----CCCCCCCCCCCHH----HHHHHHHHHhhHHHHHHHHHHHhhccCCCC----EEEE
Q 044670           72 VA----KYGKLDIMYNNAGIV----DRGFASVLDTPKS----DLDRVLAVNTTGGFLGAKHAARVMIPQHKG----CILF  135 (302)
Q Consensus        72 ~~----~~~~id~lv~~Ag~~----~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~----~iv~  135 (302)
                      .+    ++|++|+||||||+.    .. ..+..+.+.+    .++..+++|+.+++.+++.+.+.|..++.+    .|+.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~-a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQTPTLLFPF-AAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCCCSEEEEC-CCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HhhhhhhcCCCCEEEECCCcccccCcc-cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            98    899999999999971    11 0122222333    345569999999999999999999765432    2333


Q ss_pred             EcCcccccCCCCChhHHHHHHHHHHHHHHHHHH--HCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCC
Q 044670          136 TASACTEIAGIGSPAYTVSKYGIIALVKILAAE--LRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQ  212 (302)
Q Consensus       136 ~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e--~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (302)
                      .|+..+.  .++..+|++||+|+++|++.++.|  +++ +|+||+++||+|. |++......    ........+   .+
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~~~----~~~~~~~~~---~r 2362 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQNDA----IVSAVEEAG---VT 2362 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTTTT----THHHHGGGS---CB
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccchh----HHHHHHhcC---CC
Confidence            3443332  234568999999999999999999  775 6999999999999 555433211    112222221   23


Q ss_pred             CCCHHHHHHHHHHhccCCCCC-ccccEEeeC--CCccc
Q 044670          213 VLNAEGIANAALYLATDEASD-VTGLNLVVD--GGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~-~~G~~~~~~--gG~~~  247 (302)
                      ..+|+|+|.+++||+|+...+ .+|+.+.+|  ||+..
T Consensus      2363 ~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~ 2400 (3089)
T 3zen_D         2363 TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGD 2400 (3089)
T ss_dssp             CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSS
T ss_pred             CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCc
Confidence            459999999999999987554 455666655  99864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=2.1e-29  Score=214.38  Aligned_cols=202  Identities=14%  Similarity=0.146  Sum_probs=160.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCe-EEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDV-CYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||||+||++++++|+++|++|++++|+.++...+..   ..+ .++.+|++  +++       .+.++++|
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~---~~~~~~~~~Dl~--~~~-------~~~~~~~D   86 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE---RGASDIVVANLE--EDF-------SHAFASID   86 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH---TTCSEEEECCTT--SCC-------GGGGTTCS
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh---CCCceEEEcccH--HHH-------HHHHcCCC
Confidence            579999999999999999999999999999999999988776654   367 89999998  333       33345899


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC---CCChhHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG---IGSPAYTVSKY  156 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~---~~~~~Y~~sK~  156 (302)
                      +||||||....          +++++.+++|+.+++++++++.+.    +.++||++||.++..+.   .+...|+.+|+
T Consensus        87 ~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~  152 (236)
T 3e8x_A           87 AVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEKR----GIKRFIMVSSVGTVDPDQGPMNMRHYLVAKR  152 (236)
T ss_dssp             EEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHHH----TCCEEEEECCTTCSCGGGSCGGGHHHHHHHH
T ss_pred             EEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHHc----CCCEEEEEecCCCCCCCCChhhhhhHHHHHH
Confidence            99999996431          357899999999999999999663    46899999998776654   46789999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++       ..|+++++++||+++|+..........       . ......+++++|+|++++++++.+.  ..|
T Consensus       153 ~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~~~~-------~-~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  215 (236)
T 3e8x_A          153 LADDELK-------RSSLDYTIVRPGPLSNEESTGKVTVSP-------H-FSEITRSITRHDVAKVIAELVDQQH--TIG  215 (236)
T ss_dssp             HHHHHHH-------HSSSEEEEEEECSEECSCCCSEEEEES-------S-CSCCCCCEEHHHHHHHHHHHTTCGG--GTT
T ss_pred             HHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEEecc-------C-CCcccCcEeHHHHHHHHHHHhcCcc--ccC
Confidence            9998876       368999999999999986543211000       0 1112568899999999999997653  579


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      +++++++|.
T Consensus       216 ~~~~v~~~~  224 (236)
T 3e8x_A          216 KTFEVLNGD  224 (236)
T ss_dssp             EEEEEEECS
T ss_pred             CeEEEeCCC
Confidence            999998873

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.96  E-value=5.7e-29  Score=222.74  Aligned_cols=229  Identities=15%  Similarity=0.100  Sum_probs=169.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH----HhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC----KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .+|+||||||+||||++++++|+++|++|++++|+.+......+    ..+..+.++.+|++|++++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            46899999999999999999999999999999997654333322    2356789999999999998888875     37


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------C
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------I  146 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~  146 (302)
                      +|+||||||....      ....+..++.+++|+.+++++++++..    .+.++||++||.+.+...           .
T Consensus        79 ~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~  148 (341)
T 3enk_A           79 ITAAIHFAALKAV------GESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPLS  148 (341)
T ss_dssp             CCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCCB
T ss_pred             CcEEEECcccccc------CccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCCC
Confidence            9999999996532      112344568899999999998887665    456899999997665321           2


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC------CH---HHHHHHHHhc-cc--------
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI------NP---AILEAFLSEM-GN--------  208 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~---~~~~~~~~~~-~~--------  208 (302)
                      +...|+.||++++.+++.++.++.  ++++++++|+.+++|.......      ..   ..+....... .+        
T Consensus       149 ~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  226 (341)
T 3enk_A          149 ATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDY  226 (341)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCcc
Confidence            346899999999999999998853  5999999999999985421100      01   1222222211 11        


Q ss_pred             ------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 ------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 ------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                            ..+.+++++|+|+++++++........|+++++++|..+
T Consensus       227 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          227 PTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                  113478899999999998864222346899999998764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.96  E-value=1.6e-28  Score=219.35  Aligned_cols=224  Identities=16%  Similarity=0.078  Sum_probs=168.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCcc--HHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDN--LGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++++||||||+|+||++++++|+++|  ++|++++|+..  ..+.+ ..+  ..++.++.+|++|++++++++.     
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   74 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLEDDPRYTFVKGDVADYELVKELVR-----   74 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHH-----
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhccCCceEEEEcCCCCHHHHHHHhh-----
Confidence            678899999999999999999999997  89999998642  11111 111  3468899999999999888773     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------  143 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------  143 (302)
                        ++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+.           
T Consensus        75 --~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~  143 (336)
T 2hun_A           75 --KVDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEND  143 (336)
T ss_dssp             --TCSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTB
T ss_pred             --CCCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCC
Confidence              79999999996431      1234567889999999999999999986   2247999999976432           


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-------cCCCCCCH
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-------LRGQVLNA  216 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  216 (302)
                      +..+...|+.||++++.+++.++.+   .|+++++++||+++||........+.+........+.       ..+.++++
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          144 RLMPSSPYSATKAASDMLVLGWTRT---YNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEH
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEH
Confidence            2345678999999999999999987   4899999999999999864322123333333332111       11357899


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|++++++++..   .+|+++++++|..+
T Consensus       221 ~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          221 EDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            99999999998643   36999999998753

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.96  E-value=2.1e-28  Score=217.25  Aligned_cols=219  Identities=17%  Similarity=0.132  Sum_probs=169.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +.+++|||||+|+||++++++|+++|++|++++|+... ..    +  ++.++.+|++|+++++++++.     +++|+|
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l--~~~~~~~Dl~d~~~~~~~~~~-----~~~d~v   78 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P--NVEMISLDIMDSQRVKKVISD-----IKPDYI   78 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T--TEEEEECCTTCHHHHHHHHHH-----HCCSEE
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c--eeeEEECCCCCHHHHHHHHHh-----cCCCEE
Confidence            35789999999999999999999999999999998664 21    2  678899999999999888875     269999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------------CCC
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------------IGS  148 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------------~~~  148 (302)
                      ||+||....      ..+.+++++.+++|+.++.++++++ +.+  .+.++||++||.+.+...             .+.
T Consensus        79 ih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~  149 (321)
T 2pk3_A           79 FHLAAKSSV------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQLRPM  149 (321)
T ss_dssp             EECCSCCCH------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC
T ss_pred             EEcCcccch------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC
Confidence            999996431      1122357899999999999999999 544  246899999998765432             356


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH---h--cc--c-----cCCCCCCH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS---E--MG--N-----LRGQVLNA  216 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~---~--~~--~-----~~~~~~~~  216 (302)
                      ..|+.||++++.+++.++.+   +|+++++++||+++||........+.+......   .  .+  .     ..+.++++
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v  226 (321)
T 2pk3_A          150 SPYGVSKASVGMLARQYVKA---YGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV  226 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred             CccHHHHHHHHHHHHHHHHH---cCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence            78999999999999999987   389999999999999987543222334444333   2  01  1     11347899


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|++++++++..   .+|+++++++|..+
T Consensus       227 ~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          227 RDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             HHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            99999999998754   36899999998763

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.4e-28  Score=242.12  Aligned_cols=213  Identities=16%  Similarity=0.214  Sum_probs=172.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HcCC-EEEEEecC---ccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFH-ENGA-KVVIADVQ---DNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~-~~G~-~V~~~~r~---~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      .+|++|||||++|||+++++.|+ ++|+ +|++++|+   .+..+++.+++   +.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            48999999999999999999999 7999 59999998   34444444443   67899999999999999999999887


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      .+ ++|+||||||+...  .++.+.+.++|++++++|+.|++++.+++.+.|      +||++||.++..+.+++..|++
T Consensus       609 ~~-~id~lVnnAGv~~~--~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaA  679 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD--GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAA  679 (795)
T ss_dssp             TS-CEEEEEECCCCCCC--CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHH
T ss_pred             hC-CCEEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHH
Confidence            76 89999999999875  588899999999999999999999999997766      7999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      ||+    |++.|+++++++||++|+|+||++.|++.....  .+.....+....   ...++++++...+..++.....
T Consensus       680 aka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~--~~~~~~~~~~~g---~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          680 ANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTL--REAEQDRLARSG---LLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             HHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHH--HHHHHHHHHHTT---BCCCCHHHHHHHHHHHHTSSCS
T ss_pred             HHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccc--cHHHHHHHHhcC---CCCCCHHHHHHHHHHHHhCCCc
Confidence            995    666677777778999999999999987643210  111112222211   2356888888888777754433

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.96  E-value=5.1e-28  Score=217.37  Aligned_cols=219  Identities=12%  Similarity=0.084  Sum_probs=173.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CC-EEEEEecCccHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-GA-KVVIADVQDNLGQALACKLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+||||||||+||++++++|+++ |+ +|++++|++.+...+...+. .++.++.+|++|.++++++++       +
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------~   91 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------G   91 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------T
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------c
Confidence            57899999999999999999999999 97 99999999887776665553 578999999999999888776       7


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+|||+||....   +   .....+.+.+++|+.|+.++++++.+.    +.++||++||..+..   +...|+.||++
T Consensus        92 ~D~Vih~Aa~~~~---~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~~~~---p~~~Y~~sK~~  158 (344)
T 2gn4_A           92 VDICIHAAALKHV---P---IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDKAAN---PINLYGATKLC  158 (344)
T ss_dssp             CSEEEECCCCCCH---H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSS---CCSHHHHHHHH
T ss_pred             CCEEEECCCCCCC---C---chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCccCC---CccHHHHHHHH
Confidence            9999999996431   1   122345789999999999999999984    468999999977654   35789999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc-c-c-----cCCCCCCHHHHHHHHHHhccCC
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM-G-N-----LRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~-~-----~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ++.+++.++.++.+.|+++++++||+|+|+...   ..+.+........ + +     ..+.+++++|+|+++++++...
T Consensus       159 ~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~---~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~  235 (344)
T 2gn4_A          159 SDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS---VVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRM  235 (344)
T ss_dssp             HHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS---HHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC---HHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhc
Confidence            999999999888888999999999999998632   1233333333322 1 1     1133689999999999998653


Q ss_pred             CCCccccEEeeCCCc
Q 044670          231 ASDVTGLNLVVDGGF  245 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~  245 (302)
                      .   .|++++++++.
T Consensus       236 ~---~g~~~~~~~~~  247 (344)
T 2gn4_A          236 H---GGEIFVPKIPS  247 (344)
T ss_dssp             C---SSCEEEECCCE
T ss_pred             c---CCCEEecCCCc
Confidence            2   58899888764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.96  E-value=3.5e-28  Score=217.36  Aligned_cols=223  Identities=14%  Similarity=0.077  Sum_probs=170.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEE-EecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYI-HCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~-~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++|+||||||+|+||++++++|+++|++|++++|+.+....+...+    +.+++++ .+|++|.++++++++      
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   82 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc------
Confidence            46899999999999999999999999999999999877665544332    3568888 799999998777765      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-C---------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-G---------  145 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-~---------  145 (302)
                       ++|+|||+||....     .    +++++.+++|+.++.++++++.+.   .+.++||++||.+.+.. .         
T Consensus        83 -~~d~vih~A~~~~~-----~----~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~~~  149 (342)
T 1y1p_A           83 -GAAGVAHIASVVSF-----S----NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             -TCSEEEECCCCCSC-----C----SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             -CCCEEEEeCCCCCC-----C----CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCcccC
Confidence             79999999996532     1    246789999999999999998862   34689999999876531 1         


Q ss_pred             ---------------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHH
Q 044670          146 ---------------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEA  201 (302)
Q Consensus       146 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~  201 (302)
                                           .+...|+.||++++.+++.++.++.. ++++++++||+++||+......   ...++..
T Consensus       150 E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~  228 (342)
T 1y1p_A          150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS  228 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred             ccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHHHHHH
Confidence                                 12357999999999999999999876 8999999999999998754321   1233333


Q ss_pred             HHHhccc------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          202 FLSEMGN------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       202 ~~~~~~~------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      .....+.      ..+.+++++|+|++++.++...  ..+|+.+..+|+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~--~~~g~~~~~~g~~  276 (342)
T 1y1p_A          229 LFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTAGT  276 (342)
T ss_dssp             HHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECCEE
T ss_pred             HHcCCCccccccCCcCCEeEHHHHHHHHHHHHcCc--ccCCceEEEeCCC
Confidence            3222110      1245789999999999988643  3468777777654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.96  E-value=2.8e-27  Score=212.08  Aligned_cols=224  Identities=16%  Similarity=0.124  Sum_probs=168.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||||||||+||++++++|+++|++|++++|+. +........+  ..++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5899999999999999999999999999999853 2222222222  245889999999999998888752     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------------
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------------  144 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------  144 (302)
                      |||+||....      +.+.+++++.+++|+.++.++++++.+.+.   .++||++||.+.+..                
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~  147 (347)
T 1orr_A           77 CFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV  147 (347)
T ss_dssp             EEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             EEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence            9999996421      123456788999999999999999998752   268999999765431                


Q ss_pred             -----------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhc----
Q 044670          145 -----------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEM----  206 (302)
Q Consensus       145 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~----  206 (302)
                                 ..+...|+.||++++.+++.++.++   |+++++++||+|+||+......   .+.++.......    
T Consensus       148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (347)
T 1orr_A          148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  224 (347)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence                       2356789999999999999999885   8999999999999997643211   123333333322    


Q ss_pred             -cc-cC------CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          207 -GN-LR------GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       207 -~~-~~------~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                       +. ..      ..+++++|+|++++++++. ....+|+++++++|.
T Consensus       225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          225 KPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence             11 11      2377999999999999863 134579999999985

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.96  E-value=1.3e-27  Score=215.51  Aligned_cols=230  Identities=16%  Similarity=0.058  Sum_probs=173.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++++||||||+|+||++++++|+++|++|++++|+.+....+...+  ..++.++.+|++|++++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            36899999999999999999999999999999999876544333322  356889999999999998888765     69


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------CCC
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------AGI  146 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------~~~  146 (302)
                      |+|||+||...      ...+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+.            +..
T Consensus        82 d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~  152 (357)
T 1rkx_A           82 EIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMG  152 (357)
T ss_dssp             SEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred             CEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence            99999999522      12235567899999999999999999874   2367999999986432            223


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHC------CCCcEEEEEeCCcccCCcccCCC-CCHHHHHHHHHhcccc------CCCC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELR------QYGLRVNCVSPYGLVSGISSRNS-INPAILEAFLSEMGNL------RGQV  213 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~------~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~------~~~~  213 (302)
                      +...|+.||++++.+++.++.++.      +.|+++++++||+++||...... ..+.++.......+..      ...+
T Consensus       153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  232 (357)
T 1rkx_A          153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPW  232 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECC
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeecc
Confidence            467899999999999999999874      34899999999999999753211 1223333333322211      1357


Q ss_pred             CCHHHHHHHHHHhccCC--CCCccccEEeeCCC
Q 044670          214 LNAEGIANAALYLATDE--ASDVTGLNLVVDGG  244 (302)
Q Consensus       214 ~~~~dva~~~~~l~s~~--~~~~~G~~~~~~gG  244 (302)
                      ++++|+|++++.++...  .....|+++++.+|
T Consensus       233 v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          233 QHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             EETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             EeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            89999999999887531  11235788998874

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.95  E-value=5.2e-28  Score=218.14  Aligned_cols=225  Identities=19%  Similarity=0.127  Sum_probs=170.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCcc--HHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDN--LGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~--~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +||||||+|+||++++++|+++ |++|++++|+..  ..+.+ ..+  ..++.++.+|++|++++.+++++.     ++|
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDISESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCC
Confidence            6999999999999999999998 799999998642  22221 111  346889999999999988888753     799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-----CCEEEEEcCccccc-----------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-----KGCILFTASACTEI-----------  143 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~iv~~sS~~~~~-----------  143 (302)
                      +||||||....      +.+.+++++.+++|+.+++++++++.+.|..-+     .++||++||.+.+.           
T Consensus        76 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           76 AVMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999996431      123456788999999999999999999864211     25999999975432           


Q ss_pred             ----------CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----
Q 044670          144 ----------AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----  208 (302)
Q Consensus       144 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----  208 (302)
                                +..+...|+.||++++.+++.++.++   |+++++++||+|+||........+.++.......+.     
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGK  226 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETT
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCC
Confidence                      12346789999999999999999885   799999999999999864322123344444332211     


Q ss_pred             --cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 --LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                        ..+.+++++|+|++++++++..   .+|+++++++|..+
T Consensus       227 ~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          227 GDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             SCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             CceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence              1134789999999999998653   37999999998753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.95  E-value=3.8e-27  Score=212.01  Aligned_cols=226  Identities=18%  Similarity=0.108  Sum_probs=172.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----HHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----LGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |++++||||||||+||++++++|+++|++|++++|+..    ....+.+.+    ..++.++.+|++|.++++++++   
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---  101 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---  101 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc---
Confidence            36789999999999999999999999999999999764    233333222    2578899999999999888776   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------  146 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------  146 (302)
                          ++|+|||+||....      ..+.+++++.+++|+.++.++++++.+.    +.+++|++||.+.+...+      
T Consensus       102 ----~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~E  167 (352)
T 1sb8_A          102 ----GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVE  167 (352)
T ss_dssp             ----TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----CCCEEEECCcccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCCCCCC
Confidence                79999999996431      0134567899999999999999999873    568999999987765432      


Q ss_pred             -----CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHhccc--c-----C
Q 044670          147 -----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSEMGN--L-----R  210 (302)
Q Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~--~-----~  210 (302)
                           +...|+.||++++.+++.++.++   |+++++++||+++||......    ..+.+........+.  +     .
T Consensus       168 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  244 (352)
T 1sb8_A          168 DTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETS  244 (352)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCce
Confidence                 35689999999999999999874   799999999999999765431    112333333333221  1     1


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++++|+|+++++++... ....|+++++++|..+
T Consensus       245 ~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          245 RDFCYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             ECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EeeEEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            35789999999999888642 2346899999988653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=1.5e-27  Score=223.05  Aligned_cols=210  Identities=15%  Similarity=0.179  Sum_probs=166.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCcc---HHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDN---LGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~---~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .++++|||||+||||++++++|+++|++ |++++|+..   ..+++.+   ..+.++.++.+|++|+++++++++++ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5789999999999999999999999995 999999864   2333333   33567899999999999999999988 55


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+...  .++.+.+.+++++++++|+.|++++.+.+.+    .+.++||++||.++..+.++...|+++
T Consensus       304 ~g~ld~VIh~AG~~~~--~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~a~~~g~~g~~~Yaaa  377 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPG  377 (486)
T ss_dssp             TSCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cCCCcEEEECCccCCC--CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcChHhcCCCCCCHHHHHH
Confidence            6899999999998764  5777889999999999999999999987755    356899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++++.|++.++    .+|+++++|+||++.++.....    .. .   ..........++++|+++++..++...
T Consensus       378 ka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~----~~-~---~~~~~~g~~~i~~e~~a~~l~~~l~~~  441 (486)
T 2fr1_A          378 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEG----PV-A---DRFRRHGVIEMPPETACRALQNALDRA  441 (486)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC--------------------CTTTTEECBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccch----hH-H---HHHHhcCCCCCCHHHHHHHHHHHHhCC
Confidence            999998877654    4599999999999988632211    00 0   111111123679999999999998654

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.95  E-value=2e-27  Score=212.08  Aligned_cols=216  Identities=16%  Similarity=0.096  Sum_probs=163.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++++||||||+|+||++++++|+++|++|++++|+.....+..+.+ .++.++.+|++|+++++++++++     ++|+
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~~~~~~~~~~~-----~~D~   91 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDAGLLERAFDSF-----KPTH   91 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCHHHHHHHHhhc-----CCCE
Confidence            57899999999999999999999999999999999654322111112 46889999999999998888765     7999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----C------CCh
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----I------GSP  149 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----~------~~~  149 (302)
                      ||||||....   .    +.++++  +++|+.+++++++++...    +.++||++||.+.+...     +      +..
T Consensus        92 vih~A~~~~~---~----~~~~~~--~~~N~~~~~~l~~a~~~~----~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~  158 (330)
T 2pzm_A           92 VVHSAAAYKD---P----DDWAED--AATNVQGSINVAKAASKA----GVKRLLNFQTALCYGRPATVPIPIDSPTAPFT  158 (330)
T ss_dssp             EEECCCCCSC---T----TCHHHH--HHHHTHHHHHHHHHHHHH----TCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCS
T ss_pred             EEECCccCCC---c----cccChh--HHHHHHHHHHHHHHHHHc----CCCEEEEecCHHHhCCCccCCCCcCCCCCCCC
Confidence            9999996532   1    345565  999999999999999863    46899999998775443     2      567


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc----CCCCCCHHHHHH-HHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL----RGQVLNAEGIAN-AAL  224 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~-~~~  224 (302)
                      .|+.||++++.+++.+       +++...|+|+.+++|.. .......+...........    .+.+++++|+|+ +++
T Consensus       159 ~Y~~sK~~~e~~~~~~-------~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~  230 (330)
T 2pzm_A          159 SYGISKTAGEAFLMMS-------DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADL  230 (330)
T ss_dssp             HHHHHHHHHHHHHHTC-------SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHc-------CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHH
Confidence            8999999999998876       57888899999998875 1111122233322211110    245789999999 999


Q ss_pred             HhccCCCCCccccEEeeCCCccc
Q 044670          225 YLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++++...    |+++++++|..+
T Consensus       231 ~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          231 SLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             HTSTTCC----CEEEEESCSCCE
T ss_pred             HHhhcCC----CCEEEeCCCCCC
Confidence            9987532    899999998763

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.95  E-value=4.8e-27  Score=211.11  Aligned_cols=226  Identities=16%  Similarity=0.111  Sum_probs=173.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C----CCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G----EDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~----~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +++|+||||||||+||++++++|+++|++|++++|+..........+    .    .++.++.+|++|++++.++++   
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   99 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK---   99 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT---
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc---
Confidence            36899999999999999999999999999999999765332222221    1    578999999999999888776   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------  146 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------  146 (302)
                          ++|+|||+||....      ..+.+++...+++|+.++.++++++.+.    +.+++|++||.+.+...+      
T Consensus       100 ----~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E  165 (351)
T 3ruf_A          100 ----GVDHVLHQAALGSV------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPALPKVE  165 (351)
T ss_dssp             ----TCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCT
T ss_pred             ----CCCEEEECCccCCc------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCCCCCcc
Confidence                79999999996431      1234567789999999999999998773    467999999987654332      


Q ss_pred             -----CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC----CHHHHHHHHHhcccc-------C
Q 044670          147 -----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMGNL-------R  210 (302)
Q Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~-------~  210 (302)
                           +...|+.||.+.+.+++.++.+.   |+++++++|+++++|.......    .+.++.......+..       .
T Consensus       166 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  242 (351)
T 3ruf_A          166 ENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETS  242 (351)
T ss_dssp             TCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCE
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeE
Confidence                 24689999999999999999874   8999999999999997654321    234444444432211       1


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ..+++++|+|++++.++... ....|++|++.+|..+
T Consensus       243 ~~~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          243 RDFCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             ECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EeeEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            35789999999999888642 2346899999988764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=2.7e-28  Score=208.08  Aligned_cols=199  Identities=16%  Similarity=0.132  Sum_probs=151.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|++|||||+||||++++++|+++|+  +|++++|+++......   ...+.++.+|++|+++++++++       ++
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~---~~~~~~~~~D~~d~~~~~~~~~-------~~   85 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA---YKNVNQEVVDFEKLDDYASAFQ-------GH   85 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG---GGGCEEEECCGGGGGGGGGGGS-------SC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc---cCCceEEecCcCCHHHHHHHhc-------CC
Confidence            3689999999999999999999999999  9999999876433221   1357889999999998877765       79


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |+||||||....         .+++++.+++|+.++.++++++.+    .+.++||++||.++..  ++...|+.||+++
T Consensus        86 d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~  150 (242)
T 2bka_A           86 DVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK--SSNFLYLQVKGEV  150 (242)
T ss_dssp             SEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHH
T ss_pred             CEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC--CCcchHHHHHHHH
Confidence            999999996321         245788999999999999888765    4568999999987764  3456899999999


Q ss_pred             HHHHHHHHHHHCCCCc-EEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHhccCCCC
Q 044670          159 IALVKILAAELRQYGL-RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +.+++.+       ++ ++++|+||+++|++..... ............+.  ..+++++++|+|++++++++++..
T Consensus       151 e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          151 EAKVEEL-------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHTT-------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHhc-------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            9988754       46 7999999999999754311 11122222222221  125688999999999999986553

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.95  E-value=4.7e-27  Score=210.88  Aligned_cols=219  Identities=16%  Similarity=0.144  Sum_probs=166.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccH-HHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNL-GQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~-~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||||||+|+||++++++|+++  |++|++++|+... .......+ ..++.++.+|++|+++++++++       .+|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            78999999999999999999999  8999999986521 11111122 2578899999999999888776       679


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc----------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI----------------  143 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~----------------  143 (302)
                      +|||+||....      +.+.+++++.+++|+.++.++++++.+.    +. +||++||.+.+.                
T Consensus        78 ~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~  146 (348)
T 1oc2_A           78 AIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----DI-RFHHVSTDEVYGDLPLREDLPGHGEGPG  146 (348)
T ss_dssp             EEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred             EEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----CC-eEEEecccceeCCCcccccccccccccC
Confidence            99999996431      1233567789999999999999999985    23 999999976432                


Q ss_pred             -------CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-------c
Q 044670          144 -------AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-------L  209 (302)
Q Consensus       144 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~  209 (302)
                             +..+...|+.||++++.+++.++.++   |+++++++||.++||........+.++.......+.       .
T Consensus       147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (348)
T 1oc2_A          147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKN  223 (348)
T ss_dssp             SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCc
Confidence                   12345789999999999999999875   799999999999999864322123334444332211       1


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      .+.+++++|+|++++++++..   .+|+++++++|..
T Consensus       224 ~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          224 VRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             EEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             eEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence            135789999999999998643   3699999999875

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=2e-26  Score=216.33  Aligned_cols=206  Identities=22%  Similarity=0.287  Sum_probs=166.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCcc---HHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDN---LGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~---~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .++++|||||+||||++++++|+++|+ +|++++|+..   ..+++.+++   +.++.++.||++|++++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            478999999999999999999999999 6999999863   233333333   56789999999999999888876    


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                       +++|+||||||+...  .++.+.+.+++++++++|+.|++++.+.+.+.   .+.++||++||.++..+.++...|++|
T Consensus       334 -~~ld~VVh~AGv~~~--~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~Yaaa  407 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD--AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAA  407 (511)
T ss_dssp             -SCCSEEEECCCCCCC--BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHH
T ss_pred             -CCCcEEEECCcccCC--cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHH
Confidence             689999999998764  46778899999999999999999998776432   146899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcc-cCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGL-VSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++++.+++.++    .+|+++++|+||++ .|+|....     .... +....   ...++++++++++..++...
T Consensus       408 Ka~ld~la~~~~----~~gi~v~sv~pG~~~~tgm~~~~-----~~~~-~~~~g---~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          408 NAALDALAERRR----AAGLPATSVAWGLWGGGGMAAGA-----GEES-LSRRG---LRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHH----TTTCCCEEEEECCBCSTTCCCCH-----HHHH-HHHHT---BCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH----HcCCcEEEEECCcccCCcccccc-----cHHH-HHhcC---CCCCCHHHHHHHHHHHHhCC
Confidence            999999988654    46999999999999 66665421     1111 11111   23689999999999988643

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.95  E-value=3.4e-26  Score=209.33  Aligned_cols=226  Identities=11%  Similarity=-0.015  Sum_probs=165.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH--------------------HHHHHHhCCCeEEEEecCCCH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG--------------------QALACKLGEDVCYIHCDVTSE   61 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~--------------------~~~~~~~~~~~~~~~~Dl~~~   61 (302)
                      ++++||||||+|+||++++++|+++|++|++++|.....                    .......+.++.++.+|++|+
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            578999999999999999999999999999998864321                    111112245788999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc
Q 044670           62 DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT  141 (302)
Q Consensus        62 ~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~  141 (302)
                      +++.++++..     ++|+|||+||....   .....+++.+...+++|+.|+.++++++.+..   ...+||++||.+.
T Consensus        90 ~~~~~~~~~~-----~~D~Vih~A~~~~~---~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS~~v  158 (404)
T 1i24_A           90 EFLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMGE  158 (404)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGG
T ss_pred             HHHHHHHhcc-----CCCEEEECCCCCCc---cchhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCcHHH
Confidence            9998888754     69999999996532   11122556677899999999999999998742   1259999999765


Q ss_pred             cc------------------------CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-----
Q 044670          142 EI------------------------AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-----  192 (302)
Q Consensus       142 ~~------------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----  192 (302)
                      +.                        +..+...|+.||++++.+++.++.++   |+++++++||.|+||.....     
T Consensus       159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~~~~  235 (404)
T 1i24_A          159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEMHEE  235 (404)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGGSGG
T ss_pred             hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCccccccc
Confidence            42                        22345689999999999999998875   89999999999999975321     


Q ss_pred             ------------CCCHHHHHHHHHhccc-c------CCCCCCHHHHHHHHHHhccCCCCCccc--cEEeeCC
Q 044670          193 ------------SINPAILEAFLSEMGN-L------RGQVLNAEGIANAALYLATDEASDVTG--LNLVVDG  243 (302)
Q Consensus       193 ------------~~~~~~~~~~~~~~~~-~------~~~~~~~~dva~~~~~l~s~~~~~~~G--~~~~~~g  243 (302)
                                  .....++.......+. .      .+.+++++|+|++++.++.....  .|  +++++.+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~--~g~~~~yni~~  305 (404)
T 1i24_A          236 LRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK--AGEFRVFNQFT  305 (404)
T ss_dssp             GCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC--TTCEEEEEECS
T ss_pred             cccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc--CCCceEEEECC
Confidence                        1123344444333221 1      13468999999999998864332  35  6888866

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.95  E-value=8.9e-27  Score=206.04  Aligned_cols=217  Identities=13%  Similarity=0.097  Sum_probs=163.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ++|||||+|+||++++++|+++|++|++++|......   ..+...+.++.+|++|++++++++++.     ++|+|||+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   73 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVPKGVPFFRVDLRDKEGVERAFREF-----RPTHVSHQ   73 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcccCeEEEECCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            7999999999999999999999999999988543211   112235678899999999988887653     68999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------------CCChhH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------------IGSPAY  151 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------------~~~~~Y  151 (302)
                      |+....      ..+.+++++.+++|+.+++++++++.+    .+.++||++||.++.++.             .+...|
T Consensus        74 a~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y  143 (311)
T 2p5y_A           74 AAQASV------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPY  143 (311)
T ss_dssp             CSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHH
T ss_pred             ccccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChH
Confidence            996431      123456788999999999999999876    346799999998322211             245689


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhccc------------cCCCCCCH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEMGN------------LRGQVLNA  216 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~~~  216 (302)
                      +.||++++.+++.++.++   |+++++++||.++||.......   .+.+........+.            ..+.++++
T Consensus       144 ~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v  220 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYV  220 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEH
T ss_pred             HHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEH
Confidence            999999999999999874   7999999999999997654321   12233333332210            11356789


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|++++++++.+     |+++++++|..+
T Consensus       221 ~Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          221 GDVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             HHHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            99999999988642     789999988763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.95  E-value=1.1e-26  Score=208.38  Aligned_cols=226  Identities=11%  Similarity=0.034  Sum_probs=166.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccH--HHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNL--GQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~--~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +++++||||||||+||++++++|+++|  ++|++.+|....  ...+.... ..++.++.+|++|++++.++++..    
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   97 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER----   97 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc----
Confidence            357899999999999999999999999  677777775421  11111111 247899999999999998888753    


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC---------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI---------  146 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------  146 (302)
                       ++|+|||+|+....      ....+++++.+++|+.++.++++++.+.    +.+++|++||.+.+...+         
T Consensus        98 -~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~~~E~~  166 (346)
T 4egb_A           98 -DVQVIVNFAAESHV------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGRFTEET  166 (346)
T ss_dssp             -TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCCBCTTS
T ss_pred             -CCCEEEECCcccch------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCCcCCCC
Confidence             69999999997532      2244677889999999999999998873    567899999986654331         


Q ss_pred             ---CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc-------CCCCCCH
Q 044670          147 ---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-------RGQVLNA  216 (302)
Q Consensus       147 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  216 (302)
                         +...|+.||.+.|.+++.++.+.   |+++++++||++++|........+.++.......+..       ...++++
T Consensus       167 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  243 (346)
T 4egb_A          167 PLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHV  243 (346)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEH
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEH
Confidence               24689999999999999999874   8999999999999997754332334444444332111       1246789


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|+++++++....   .|+++++.+|..+
T Consensus       244 ~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          244 TDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             HHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             HHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            999999999987544   6899999998763

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1e-26  Score=208.08  Aligned_cols=212  Identities=15%  Similarity=0.093  Sum_probs=160.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++||||||+|+||++++++|+++|++|++++|+.+..+.+.   ..+++++.+|++|++++.++++       ++|+|||
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~---~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vih   83 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA---YLEPECRVAEMLDHAGLERALR-------GLDGVIF   83 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG---GGCCEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc---cCCeEEEEecCCCHHHHHHHHc-------CCCEEEE
Confidence            47999999999999999999999999999999876543321   1267889999999999887776       6999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC----------------
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG----------------  147 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~----------------  147 (302)
                      +||...        ...+++++.+++|+.++.++++++.+.    +.+++|++||.+.+...+.                
T Consensus        84 ~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~  151 (342)
T 2x4g_A           84 SAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG  151 (342)
T ss_dssp             C--------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTT
T ss_pred             CCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccc
Confidence            999542        124567889999999999999999884    4578999999877654443                


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc----cCCCCCCHHHHHHHH
Q 044670          148 SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN----LRGQVLNAEGIANAA  223 (302)
Q Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~  223 (302)
                      ...|+.||.+.+.+++.++.   + |+++++++||+++||...... ...+..........    ....+++++|+|+++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence            67899999999999999885   3 899999999999999762211 33444444333221    112377999999999


Q ss_pred             HHhccCCCCCccccEEeeCCCc
Q 044670          224 LYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       224 ~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      +++++...   .|+++++++|.
T Consensus       227 ~~~~~~~~---~g~~~~v~~~~  245 (342)
T 2x4g_A          227 LMALERGR---IGERYLLTGHN  245 (342)
T ss_dssp             HHHHHHSC---TTCEEEECCEE
T ss_pred             HHHHhCCC---CCceEEEcCCc
Confidence            99987543   28999999987

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.94  E-value=3.6e-27  Score=198.32  Aligned_cols=192  Identities=13%  Similarity=0.122  Sum_probs=156.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +|+||||+|+||++++++|+++|++|++++|+.+.....     .++.++.+|++| ++++.++++       ++|+|||
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi~   69 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-----NNVKAVHFDVDWTPEEMAKQLH-------GMDAIIN   69 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-----TTEEEEECCTTSCHHHHHTTTT-------TCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-----CCceEEEecccCCHHHHHHHHc-------CCCEEEE
Confidence            799999999999999999999999999999988754332     478999999999 999887776       7999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC-------ChhHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG-------SPAYTVSKY  156 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~-------~~~Y~~sK~  156 (302)
                      |||....              +.+++|+.++.++++++..    .+.+++|++||..+..+.+.       ...|+.+|.
T Consensus        70 ~ag~~~~--------------~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A           70 VSGSGGK--------------SLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             CCCCTTS--------------SCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHH
T ss_pred             CCcCCCC--------------CcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHHHH
Confidence            9996531              2677899999999988865    45679999999887766555       779999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++.+++      ...|+++++++||+++++........           ......+++++|+|++++++++.+.  ..|
T Consensus       132 ~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~~-----------~~~~~~~i~~~Dva~~i~~~l~~~~--~~g  192 (219)
T 3dqp_A          132 FADLYLT------KETNLDYTIIQPGALTEEEATGLIDI-----------NDEVSASNTIGDVADTIKELVMTDH--SIG  192 (219)
T ss_dssp             HHHHHHH------HSCCCEEEEEEECSEECSCCCSEEEE-----------SSSCCCCEEHHHHHHHHHHHHTCGG--GTT
T ss_pred             HHHHHHH------hccCCcEEEEeCceEecCCCCCcccc-----------CCCcCCcccHHHHHHHHHHHHhCcc--ccC
Confidence            9998887      34699999999999999865432110           1222668999999999999997643  358


Q ss_pred             cEEeeCCCc
Q 044670          237 LNLVVDGGF  245 (302)
Q Consensus       237 ~~~~~~gG~  245 (302)
                      +++++++|.
T Consensus       193 ~~~~i~~g~  201 (219)
T 3dqp_A          193 KVISMHNGK  201 (219)
T ss_dssp             EEEEEEECS
T ss_pred             cEEEeCCCC
Confidence            999997774

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=3e-26  Score=192.94  Aligned_cols=193  Identities=10%  Similarity=0.007  Sum_probs=146.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHH-HcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFH-ENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|+++||||+||||++++++|+ ++|++|++++|+++ +.+.+. ....++.++.+|++|+++++++++       ++|+
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~-------~~d~   76 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVT-------NAEV   76 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHc-------CCCE
Confidence            3689999999999999999999 89999999999977 655543 234678999999999999888886       7899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCCh----------h
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP----------A  150 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~----------~  150 (302)
                      ||||||..                     |+.     ++.+++.|.+.+.++||++||..+..+.+...          .
T Consensus        77 vv~~ag~~---------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~  130 (221)
T 3r6d_A           77 VFVGAMES---------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPIS  130 (221)
T ss_dssp             EEESCCCC---------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHH
T ss_pred             EEEcCCCC---------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccH
Confidence            99999841                     222     66777777767788999999998876655433          8


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc--c
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA--T  228 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s  228 (302)
                      |+.+|.+++.+++.       .||++++|+||++.++.........       ....+..+.+++++|+|+++++++  +
T Consensus       131 y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~dvA~~~~~l~~~~  196 (221)
T 3r6d_A          131 YVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYELI-------PEGAQFNDAQVSREAVVKAIFDILHAA  196 (221)
T ss_dssp             HHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCEEE-------CTTSCCCCCEEEHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCcceeec-------cCCccCCCceeeHHHHHHHHHHHHHhc
Confidence            99999999987753       5899999999999988322211000       000122244789999999999999  8


Q ss_pred             CCCCCccccEEeeCCC
Q 044670          229 DEASDVTGLNLVVDGG  244 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG  244 (302)
                      ++..++++ .+.+++.
T Consensus       197 ~~~~~~~~-~~~i~~~  211 (221)
T 3r6d_A          197 DETPFHRT-SIGVGEP  211 (221)
T ss_dssp             CCGGGTTE-EEEEECT
T ss_pred             Chhhhhcc-eeeecCC
Confidence            77666544 5555443

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.94  E-value=3.1e-27  Score=208.95  Aligned_cols=218  Identities=17%  Similarity=0.092  Sum_probs=166.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |+||||||||+||++++++|+++|++|++++|+.+......   ...+.++.+|++|.+ +.++++       . |+|||
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vih   68 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV---NPSAELHVRDLKDYS-WGAGIK-------G-DVVFH   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS---CTTSEEECCCTTSTT-TTTTCC-------C-SEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc---CCCceEEECccccHH-HHhhcC-------C-CEEEE
Confidence            57999999999999999999999999999999765433221   356789999999987 665554       4 99999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  152 (302)
                      +|+...      ...+.++++..+++|+.++.++++++...    +.++||++||.+.+..           ..+...|+
T Consensus        69 ~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           69 FAANPE------VRLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             CCSSCS------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCCC------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            999532      23445567899999999999999998763    4679999999876532           23467899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--------cCCCCCCHHHHHHHHH
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--------LRGQVLNAEGIANAAL  224 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~  224 (302)
                      .||++.+.+++.++.++   |+++++++||+++||...... ...++........+        ....+++++|+|++++
T Consensus       139 ~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  214 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHGV-IYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATL  214 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSSH-HHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCCh-HHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHH
Confidence            99999999999999885   899999999999999765321 22344443332111        1134778999999999


Q ss_pred             HhccC-CCCCccccEEeeCCCccc
Q 044670          225 YLATD-EASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       225 ~l~s~-~~~~~~G~~~~~~gG~~~  247 (302)
                      +++.. ......|+++++.+|..+
T Consensus       215 ~~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          215 AAWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHHhccccCCCCcEEEEcCCCce
Confidence            99865 112346899999988764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.94  E-value=1.7e-26  Score=204.39  Aligned_cols=215  Identities=13%  Similarity=0.156  Sum_probs=162.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |+||||||||+||++++++|+++|+.|++..|+....+.    ....+.++.+|+++ +++.++++       ++|+|||
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~----~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vih   69 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF----VNEAARLVKADLAA-DDIKDYLK-------GAEEVWH   69 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG----SCTTEEEECCCTTT-SCCHHHHT-------TCSEEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh----cCCCcEEEECcCCh-HHHHHHhc-------CCCEEEE
Confidence            579999999999999999999999655555554433221    23578899999999 88877776       7999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------CCCCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------AGIGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------~~~~~~~Y~  152 (302)
                      +|+...      ...+.+++++.+++|+.++.++++++...    +.+++|++||.+.+.           +..+...|+
T Consensus        70 ~a~~~~------~~~~~~~~~~~~~~nv~~~~~l~~~~~~~----~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           70 IAANPD------VRIGAENPDEIYRNNVLATYRLLEAMRKA----GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             CCCCCC------CC-CCCCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             CCCCCC------hhhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            999532      23445578899999999999999987663    467999999987653           233567899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--------cCCCCCCHHHHHHHHH
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--------LRGQVLNAEGIANAAL  224 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~dva~~~~  224 (302)
                      .||.+.+.+++.++.++   |+++++++|+.+++|..... ....++........+        ....+++++|+|++++
T Consensus       140 ~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~  215 (313)
T 3ehe_A          140 ASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAML  215 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHH
Confidence            99999999999999884   89999999999999876532 123344443332111        1135889999999999


Q ss_pred             HhccCCCCCccccEEeeCCCccc
Q 044670          225 YLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++...   ..|+++++.+|..+
T Consensus       216 ~~~~~~---~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          216 FGLRGD---ERVNIFNIGSEDQI  235 (313)
T ss_dssp             HHTTCC---SSEEEEECCCSCCE
T ss_pred             HHhccC---CCCceEEECCCCCe
Confidence            999732   35899999998764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.94  E-value=1.9e-26  Score=206.31  Aligned_cols=225  Identities=17%  Similarity=0.058  Sum_probs=158.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH-HHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ-ALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |++|+||||||+|+||++++++|+++|++|++++|+.+... ...+.+  ..++.++.+|++|++++.++++..     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            67999999999999999999999999999999999876432 112222  236889999999999998888765     7


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------CCC
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------AGI  146 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------~~~  146 (302)
                      +|+||||||....      +.+.+++++.+++|+.++.++++++.+.   ...++||++||.+.+.           +..
T Consensus        76 ~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           76 PDEVYNLAAQSFV------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             CSEEEECCCCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CCEEEECCCCcch------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            8999999996431      1123467899999999999999999863   1137999999986432           234


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhcc-c-------cCCCCCC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMG-N-------LRGQVLN  215 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~-~-------~~~~~~~  215 (302)
                      +...|+.||++++.+++.++.++.   +++..+.|..+++|........   ............ .       ..+.+++
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~---~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYN---MFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGY  223 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHC---CCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhC---CceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEE
Confidence            567899999999999999998863   4444444444544433221111   111112111111 0       1134889


Q ss_pred             HHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          216 AEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      ++|+|++++++++...    ++.+++.+|..
T Consensus       224 v~Dva~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          224 APEYVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             HHHHHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             HHHHHHHHHHHHhCCC----CceEEEeCCCC
Confidence            9999999999997543    36778877765

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.94  E-value=4.1e-26  Score=203.86  Aligned_cols=215  Identities=16%  Similarity=0.124  Sum_probs=159.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++++||||||+|+||++++++|+++|++|++++|+.....+....+ .++.++.+|++|+++++++++..     ++|+
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~D~   92 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH-PNLTFVEGSIADHALVNQLIGDL-----QPDA   92 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC-TTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc-CCceEEEEeCCCHHHHHHHHhcc-----CCcE
Confidence            46889999999999999999999999999999999754321111111 36789999999999988888742     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc----CC--------CCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI----AG--------IGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~----~~--------~~~  148 (302)
                      ||||||....   .    +.++++  +++|+.++.++++++.+    .+.++||++||.+.+.    ..        .+.
T Consensus        93 vih~A~~~~~---~----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~  159 (333)
T 2q1w_A           93 VVHTAASYKD---P----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPA  159 (333)
T ss_dssp             EEECCCCCSC---T----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCT
T ss_pred             EEECceecCC---C----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCC
Confidence            9999997542   1    334555  99999999999999988    3568999999977654    21        234


Q ss_pred             -hhHHHHHHHHHHHHHH-HHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc----ccCCCCCCHHHHHHH
Q 044670          149 -PAYTVSKYGIIALVKI-LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG----NLRGQVLNAEGIANA  222 (302)
Q Consensus       149 -~~Y~~sK~a~~~~~~~-la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dva~~  222 (302)
                       ..|+.||++++.+++. ++        +++.++|+.+++|... ....+.++........    .....+++++|+|++
T Consensus       160 ~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a  230 (333)
T 2q1w_A          160 NSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV-SGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARA  230 (333)
T ss_dssp             TCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC-SSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc-CcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHH
Confidence             7899999999999887 54        6789999999998721 1112333333322211    112457899999999


Q ss_pred             HHHhccCCCCCccccEEeeCCCccc
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++++++.+.    |+++++++|..+
T Consensus       231 i~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          231 TVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHhcCC----CCEEEeCCCCCc
Confidence            999997543    899999998763

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.94  E-value=3.5e-26  Score=204.41  Aligned_cols=219  Identities=18%  Similarity=0.165  Sum_probs=155.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH--HhC---CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC--KLG---EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++|+||||||+|+||++++++|+++|++|+++.|+.+.......  .+.   .+++++.+|++|+++++++++       
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   76 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-------   76 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-------
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-------
Confidence            57999999999999999999999999999999998764322211  121   257889999999999887776       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      .+|+|||+|+...     ..  ..+..++.+++|+.|+.++++++.+..   ..++||++||.++..+.           
T Consensus        77 ~~d~Vih~A~~~~-----~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~  146 (337)
T 2c29_D           77 GCTGVFHVATPMD-----FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESC  146 (337)
T ss_dssp             TCSEEEECCCCCC-----SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTC
T ss_pred             CCCEEEEeccccC-----CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCccc
Confidence            6899999998531     11  122345789999999999999998853   25799999998754321           


Q ss_pred             -----------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH--HHHhccc----
Q 044670          146 -----------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA--FLSEMGN----  208 (302)
Q Consensus       146 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~~----  208 (302)
                                 ++...|+.||++.|.+++.++.+   +|+++++++||+|+||...... .......  .......    
T Consensus       147 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~-~~~~~~~~~~~~g~~~~~~~  222 (337)
T 2c29_D          147 WSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSM-PPSLITALSPITGNEAHYSI  222 (337)
T ss_dssp             CCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSC-CHHHHHHTHHHHTCGGGHHH
T ss_pred             CCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCC-CchHHHHHHHHcCCCccccc
Confidence                       12346999999999999888765   4899999999999999764331 2211111  0111000    


Q ss_pred             -cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCC
Q 044670          209 -LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       209 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                       ...++++++|+|++++++++..  ...|.+ ++.++
T Consensus       223 ~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~-~~~~~  256 (337)
T 2c29_D          223 IRQGQFVHLDDLCNAHIYLFENP--KAEGRY-ICSSH  256 (337)
T ss_dssp             HTEEEEEEHHHHHHHHHHHHHCT--TCCEEE-EECCE
T ss_pred             cCCCCEEEHHHHHHHHHHHhcCc--ccCceE-EEeCC
Confidence             1134889999999999998643  234654 44333

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.94  E-value=5.8e-27  Score=200.60  Aligned_cols=217  Identities=12%  Similarity=-0.007  Sum_probs=159.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|+++||||+|+||++++++|+++  |++|++++|++++...+    +.++.++.+|++|+++++++++       .+
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~-------~~   70 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI----GGEADVFIGDITDADSINPAFQ-------GI   70 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT----TCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc----CCCeeEEEecCCCHHHHHHHHc-------CC
Confidence            46899999999999999999999999  89999999987655433    4567789999999999888876       68


Q ss_pred             cEEEEcccCCCCCCC-------CCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCCh--
Q 044670           79 DIMYNNAGIVDRGFA-------SVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSP--  149 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~--  149 (302)
                      |+||||||.......       ...+...+.+++.+++|+.++.++++++.+.    +.++||++||..+..+..+..  
T Consensus        71 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~~~~~~~~~  146 (253)
T 1xq6_A           71 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTNPDHPLNKL  146 (253)
T ss_dssp             SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTCTTCGGGGG
T ss_pred             CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCCCCCccccc
Confidence            999999997532100       0011223345578899999999999988764    457999999987765444333  


Q ss_pred             ---hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          150 ---AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       150 ---~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                         .|+.+|.+++.+++.       .|+++++++||+++++.............    .......++++++|+|++++++
T Consensus       147 ~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dva~~~~~~  215 (253)
T 1xq6_A          147 GNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRELLVGKDD----ELLQTDTKTVPRADVAEVCIQA  215 (253)
T ss_dssp             GGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSCEEEESTT----GGGGSSCCEEEHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhhhhccCCc----CCcCCCCcEEcHHHHHHHHHHH
Confidence               366699999888753       58999999999999986432110000000    0001114578999999999999


Q ss_pred             ccCCCCCccccEEeeCCCc
Q 044670          227 ATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~  245 (302)
                      ++.+.  ..|++++++++.
T Consensus       216 ~~~~~--~~g~~~~i~~~~  232 (253)
T 1xq6_A          216 LLFEE--AKNKAFDLGSKP  232 (253)
T ss_dssp             TTCGG--GTTEEEEEEECC
T ss_pred             HcCcc--ccCCEEEecCCC
Confidence            97543  368999998863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.94  E-value=3.6e-26  Score=205.13  Aligned_cols=214  Identities=12%  Similarity=0.076  Sum_probs=162.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++|+||||||||+||++++++|+++|++|++++|+.+.         .++.++.+|++|.+++.++++       ++|+|
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------TGGEEVVGSLEDGQALSDAIM-------GVSAV   81 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------SCCSEEESCTTCHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------CCccEEecCcCCHHHHHHHHh-------CCCEE
Confidence            57899999999999999999999999999999998765         367789999999999888776       79999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-------------CCCC
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-------------GIGS  148 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-------------~~~~  148 (302)
                      ||+|+....        +.+.++..+++|+.++.++++++.+    .+.++||++||.+.+..             ..+.
T Consensus        82 ih~A~~~~~--------~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~  149 (347)
T 4id9_A           82 LHLGAFMSW--------APADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN  149 (347)
T ss_dssp             EECCCCCCS--------SGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC
T ss_pred             EECCcccCc--------chhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC
Confidence            999996532        2344589999999999999999877    45679999999765432             2355


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCccc-------------CCcccCCCC-------CHHHHHHHHHhccc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV-------------SGISSRNSI-------NPAILEAFLSEMGN  208 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~-------------t~~~~~~~~-------~~~~~~~~~~~~~~  208 (302)
                      ..|+.||.+.|.+++.++.+   .|+++++++|++++             +|.......       ....+..+......
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (347)
T 4id9_A          150 SPYGLTKLLGEELVRFHQRS---GAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDI  226 (347)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---SSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCC
T ss_pred             ChHHHHHHHHHHHHHHHHHh---cCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHc
Confidence            78999999999999999877   58999999999999             554321000       01222222221110


Q ss_pred             -----------cCCCC----CCHHHHHHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          209 -----------LRGQV----LNAEGIANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       209 -----------~~~~~----~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                                 ..+.+    ++++|+|++++.++..+.  ..|+++++.+|..++
T Consensus       227 ~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~s  279 (347)
T 4id9_A          227 GEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPAD  279 (347)
T ss_dssp             SSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCEE
T ss_pred             CCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCccc
Confidence                       01335    889999999999997543  358999999887643

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.94  E-value=2.9e-26  Score=204.87  Aligned_cols=219  Identities=14%  Similarity=0.146  Sum_probs=164.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc---C---CEEEEEecCccH--HHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHEN---G---AKVVIADVQDNL--GQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~---G---~~V~~~~r~~~~--~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  ...+ ..+  +.++.++.+|++|++++++++.     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   75 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLARELR-----   75 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHhc-----
Confidence            6999999999999999999997   8   999999986421  1111 111  2568899999999998877763     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc-----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI-----------  143 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~-----------  143 (302)
                        ++|+|||+||....      +.+.+++++.+++|+.++.++++++.+.    +.++||++||.+.+.           
T Consensus        76 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           76 --GVDAIVHFAAESHV------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             --TCCEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             --CCCEEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence              89999999996431      1223456789999999999999999885    357999999976543           


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc-------CCCCCCH
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-------RGQVLNA  216 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  216 (302)
                      +..+...|+.||++.+.+++.++.++   |+++++++||+++||........+.+........+..       ...++++
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHT  220 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEH
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeH
Confidence            22346789999999999999999874   7999999999999998643221233333333321111       1346789


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|+++++++...   .+|+++++++|..+
T Consensus       221 ~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          221 DDHCRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            99999999988643   26899999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.94  E-value=6.2e-26  Score=206.28  Aligned_cols=220  Identities=14%  Similarity=0.090  Sum_probs=166.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++||||||+|+||++++++|+++|++|++++|+.......   ...++.++.+|++|.+++.++++       ++|+|
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~v~~~~~Dl~d~~~~~~~~~-------~~d~V   97 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE---DMFCDEFHLVDLRVMENCLKVTE-------GVDHV   97 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG---GGTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh---ccCCceEEECCCCCHHHHHHHhC-------CCCEE
Confidence            468999999999999999999999999999999986543211   12467889999999999888775       79999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc------------------
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI------------------  143 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~------------------  143 (302)
                      ||+|+....  ..   .+.+++++.+++|+.++.++++++.+    .+.++||++||.+.+.                  
T Consensus        98 ih~A~~~~~--~~---~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~  168 (379)
T 2c5a_A           98 FNLAADMGG--MG---FIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLKESDAW  168 (379)
T ss_dssp             EECCCCCCC--HH---HHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             EECceecCc--cc---ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence            999996431  00   11235788999999999999999876    3467999999976543                  


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHhcc--c------cCC
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSEMG--N------LRG  211 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~--~------~~~  211 (302)
                      +..+...|+.||++++.+++.++.++   |+++++++||++++|......    ....++.......+  .      ...
T Consensus       169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (379)
T 2c5a_A          169 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  245 (379)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeE
Confidence            22345689999999999999998774   799999999999999764321    12334444333211  1      113


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      .+++++|+|++++.++..+    .|+.+++.+|..+
T Consensus       246 ~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          246 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            5788999999999998654    4778899888663

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.94  E-value=2.7e-26  Score=202.98  Aligned_cols=211  Identities=14%  Similarity=0.117  Sum_probs=161.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++||||||||+||++++++|+++|++|++++|++.... +     .++.++.+|++ ++++.++++       ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-----~~~~~~~~Dl~-~~~~~~~~~-------~~d~Vi   67 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-----NDYEYRVSDYT-LEDLINQLN-------DVDAVV   67 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------CCEEEECCCC-HHHHHHHTT-------TCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-----CceEEEEcccc-HHHHHHhhc-------CCCEEE
Confidence            478999999999999999999999999999999854433 2     16789999999 988887776       799999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAY  151 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y  151 (302)
                      |+|+....   .       ++++.+++|+.++.++++++..    .+.+++|++||.+.+...           .+...|
T Consensus        68 h~a~~~~~---~-------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           68 HLAATRGS---Q-------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             ECCCCCCS---S-------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EccccCCC---C-------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            99997543   1       3456789999999999999876    346789999997654321           235689


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc-------CCCCCCHHHHHHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-------RGQVLNAEGIANAAL  224 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~  224 (302)
                      +.||.+.|.+++.++.+   .|+++++++|+.+++|........+.+........+..       ...+++++|+|++++
T Consensus       134 ~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~  210 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVI  210 (311)
T ss_dssp             HHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHH
Confidence            99999999999999876   58999999999999997754322234444433322111       124789999999999


Q ss_pred             HhccCCCCCccccEEeeCCCccc
Q 044670          225 YLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      .++..+.   .|+++++.+|..+
T Consensus       211 ~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          211 YALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHhcCC---CCCeEEeCCCCcc
Confidence            9997544   6899999988764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.94  E-value=2.1e-25  Score=200.05  Aligned_cols=228  Identities=15%  Similarity=0.109  Sum_probs=164.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----------HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----------LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +|+||||||+|+||++++++|+++|++|++++|+..          ..+.+....+.++.++.+|++|++++++++++. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            589999999999999999999999999999987532          222232223457889999999999988877652 


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--------
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--------  144 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--------  144 (302)
                          ++|+|||+||....      ..+.+++++.+++|+.++.++++++..    .+.++||++||.+.+..        
T Consensus        81 ----~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~E  146 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPLDE  146 (348)
T ss_dssp             ----CEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ----CCCEEEECCCCcCc------cchhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCcCC
Confidence                79999999996431      013456788999999999999988765    35679999999766532        


Q ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC------CCCCHHHH---HHHHH-hccc--
Q 044670          145 ----GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR------NSINPAIL---EAFLS-EMGN--  208 (302)
Q Consensus       145 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~~---~~~~~-~~~~--  208 (302)
                          .+....|+.||++++.+++.++.+ . .++++++++|+.+++|....      ......+.   ..... ...+  
T Consensus       147 ~~~~~p~~~~Y~~sK~~~e~~~~~~~~~-~-~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (348)
T 1ek6_A          147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA-D-KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALN  224 (348)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH-C-TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEE
T ss_pred             CCCCCCCCCchHHHHHHHHHHHHHHHhc-C-CCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeE
Confidence                122678999999999999999987 3 36999999999999984211      00001111   12221 1110  


Q ss_pred             ------------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 ------------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 ------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                                  ....+++++|+|++++.++........++++++.+|..+
T Consensus       225 ~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~  275 (348)
T 1ek6_A          225 VFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (348)
T ss_dssp             EECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCc
Confidence                        112478999999999988864321122489999887653

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=5e-27  Score=198.29  Aligned_cols=206  Identities=11%  Similarity=-0.039  Sum_probs=158.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++||||||||+||++++++|+++|++|++++|+.+....+    ...+.++.+|++|++++.++++       ++|+|||
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi~   73 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE----NEHLKVKKADVSSLDEVCEVCK-------GADAVIS   73 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC----CTTEEEECCCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc----cCceEEEEecCCCHHHHHHHhc-------CCCEEEE
Confidence            7899999999999999999999999999999987754322    2578999999999999888877       6899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------CChhHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------GSPAYTV  153 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~  153 (302)
                      +||....            ..+.+++|+.++.++++++.+    .+.+++|++||.+...+.+          +...|+.
T Consensus        74 ~a~~~~~------------~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           74 AFNPGWN------------NPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             CCCC------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             eCcCCCC------------ChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            9985321            123788899999999998877    3467999999987655432          3678999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc---ccCCCCCCHHHHHHHHHHhccCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG---NLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +|++.+.+.+.++.   ..|+++++++||++++|..........      ...+   .....+++++|+|++++.++..+
T Consensus       138 sK~~~e~~~~~~~~---~~~~~~~ilrp~~v~g~~~~~~~~~~~------~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~  208 (227)
T 3dhn_A          138 VKALGEFYLNFLMK---EKEIDWVFFSPAADMRPGVRTGRYRLG------KDDMIVDIVGNSHISVEDYAAAMIDELEHP  208 (227)
T ss_dssp             HHHHHHHHHHTGGG---CCSSEEEEEECCSEEESCCCCCCCEEE------SSBCCCCTTSCCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHhh---ccCccEEEEeCCcccCCCccccceeec------CCCcccCCCCCcEEeHHHHHHHHHHHHhCc
Confidence            99999998888875   368999999999999986543211100      0000   00134789999999999999765


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      .  ..|+++.+.+....
T Consensus       209 ~--~~g~~~~~~~~~~~  223 (227)
T 3dhn_A          209 K--HHQERFTIGYLEHH  223 (227)
T ss_dssp             C--CCSEEEEEECCSCC
T ss_pred             c--ccCcEEEEEeehhc
Confidence            4  47999998886543

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.94  E-value=6.8e-26  Score=201.05  Aligned_cols=214  Identities=17%  Similarity=0.137  Sum_probs=150.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec-CccH---HHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNL---GQALACKLG---EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r-~~~~---~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ||+||||||+|+||++++++|+++|++|+++.| +.+.   ...+ ..+.   .++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-HhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 5422   1111 1111   246788999999999888776      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCH-HHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC--------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPK-SDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI--------  146 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--------  146 (302)
                       .+|+|||+|+..        .... +.+++.+++|+.|++++++++.+..   +.++||++||.++..+.+        
T Consensus        74 -~~d~vih~A~~~--------~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e  141 (322)
T 2p4h_X           74 -GCVGIFHTASPI--------DFAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDE  141 (322)
T ss_dssp             -TCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEcCCcc--------cCCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCC
Confidence             689999999732        1111 2245699999999999999988741   467999999987543221        


Q ss_pred             --------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhcccc
Q 044670          147 --------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEMGNL  209 (302)
Q Consensus       147 --------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~  209 (302)
                                    ....|+.||++.+.+++.++.+   +|+++++++||+|+||+..... .. .....   .......
T Consensus       142 ~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~-~~-~~~~~~~~~~g~~~~  216 (322)
T 2p4h_X          142 SDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKL-PD-SIEKALVLVLGKKEQ  216 (322)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSC-CH-HHHHHTHHHHSCGGG
T ss_pred             ccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCC-Cc-hHHHHHHHHhCCCcc
Confidence                          1126999999998888877754   5899999999999999765321 11 11111   1111110


Q ss_pred             CC----CCCCHHHHHHHHHHhccCCCCCccccEEeeCC
Q 044670          210 RG----QVLNAEGIANAALYLATDEASDVTGLNLVVDG  243 (302)
Q Consensus       210 ~~----~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~g  243 (302)
                      .+    .+++++|+|++++++++...  .+|+ +++.+
T Consensus       217 ~~~~~~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          217 IGVTRFHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             CCEEEEEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             CcCCCcCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence            11    37899999999999986532  4676 55544

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.94  E-value=3.5e-26  Score=206.57  Aligned_cols=219  Identities=16%  Similarity=0.116  Sum_probs=162.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH--cCCEEEEEecCccHHH----------HHHHHhCCCeEEEEecCCCHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE--NGAKVVIADVQDNLGQ----------ALACKLGEDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~----------~~~~~~~~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      |++|+||||||+|+||++++++|++  +|++|++++|+.....          ......+..+.++.+|++|+++++++ 
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-   86 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL-   86 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH-
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh-
Confidence            4689999999999999999999999  9999999999765211          01111234678999999999998776 


Q ss_pred             HHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC--
Q 044670           69 DTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI--  146 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~--  146 (302)
                           ...++|+|||+||....        +.+++++.+++|+.++.++++++...    + .+||++||.+.+....  
T Consensus        87 -----~~~~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~~~V~~SS~~vyg~~~~~  148 (362)
T 3sxp_A           87 -----EKLHFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIARSK----K-AKVIYASSAGVYGNTKAP  148 (362)
T ss_dssp             -----TTSCCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEEEEGGGGCSCCSS
T ss_pred             -----hccCCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEeCcHHHhCCCCCC
Confidence                 22489999999995421        23467899999999999999999662    3 4599999965543221  


Q ss_pred             --------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHhcccc-----
Q 044670          147 --------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSEMGNL-----  209 (302)
Q Consensus       147 --------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~~-----  209 (302)
                              +...|+.||++++.+++.++.+     ++++.++|+.+++|......    ..+.+........+..     
T Consensus       149 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  223 (362)
T 3sxp_A          149 NVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFG  223 (362)
T ss_dssp             BCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGG
T ss_pred             CCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCC
Confidence                    3456999999999999988744     88999999999999765431    1223333333322111     


Q ss_pred             --CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          210 --RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 --~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                        ...+++++|+|++++++++.+.   +| ++++++|...
T Consensus       224 ~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          224 EQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             CCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             CeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence              1347789999999999997653   58 9999888764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.94  E-value=5.3e-26  Score=205.99  Aligned_cols=222  Identities=16%  Similarity=0.125  Sum_probs=169.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVT-SEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|+||||||||+||++++++|+++ |++|++++|+.+....+..  ..+++++.+|++ |.++++++++       ++
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~v~~~~~Dl~~d~~~~~~~~~-------~~   92 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK--HERMHFFEGDITINKEWVEYHVK-------KC   92 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG--STTEEEEECCTTTCHHHHHHHHH-------HC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc--CCCeEEEeCccCCCHHHHHHHhc-------cC
Confidence            46789999999999999999999998 9999999998766544322  257899999999 9999888887       68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------------
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------------  145 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------------  145 (302)
                      |+|||+|+....      ....++.++.+++|+.++.++++++...    + +++|++||.+.+...             
T Consensus        93 d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~  161 (372)
T 3slg_A           93 DVILPLVAIATP------ATYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDASALT  161 (372)
T ss_dssp             SEEEECBCCCCH------HHHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTTCCEE
T ss_pred             CEEEEcCccccH------HHHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCccccccc
Confidence            999999996532      1123456789999999999999998774    3 789999997554321             


Q ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHHHHHHHHhccc-c--
Q 044670          146 -----IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAILEAFLSEMGN-L--  209 (302)
Q Consensus       146 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~-~--  209 (302)
                           .+...|+.||.+.|.+++.++.+    |+++++++|+.+++|......        ....++.......+. .  
T Consensus       162 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (372)
T 3slg_A          162 YGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVD  237 (372)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGG
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeC
Confidence                 23347999999999999998854    899999999999999865311        112333333333211 1  


Q ss_pred             ----CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCC-Ccc
Q 044670          210 ----RGQVLNAEGIANAALYLATDEASDVTGLNLVVDG-GFS  246 (302)
Q Consensus       210 ----~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~g-G~~  246 (302)
                          ...+++++|+|++++.++........|+++++.+ |..
T Consensus       238 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          238 GGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             GGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             CCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence                1247899999999999997654335799999999 544

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.94  E-value=3.9e-25  Score=183.51  Aligned_cols=200  Identities=13%  Similarity=0.067  Sum_probs=152.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||||||+||++++++|+++|++|++++|+++.....   ...+++++.+|++|++++.++++       .+|+
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc---cCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            5678999999999999999999999999999999987654321   13568899999999999888776       6899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----CChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----GSPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----~~~~Y~~sK~  156 (302)
                      |||+||....     .+.        .++|+.++.++++++.+.    +.+++|++||.......+    +...|+.+|.
T Consensus        71 vi~~a~~~~~-----~~~--------~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~  133 (206)
T 1hdo_A           71 VIVLLGTRND-----LSP--------TTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (206)
T ss_dssp             EEECCCCTTC-----CSC--------CCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEECccCCCC-----CCc--------cchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcccccccchhHHHHHH
Confidence            9999996432     111        137888888888888763    467999999987665444    5678999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCccc-CCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLV-SGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++.+++.       .++++++++||++. ++......  ...     ... +. +.+++++|+|++++++++.+.  .+
T Consensus       134 ~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~--~~~-----~~~-~~-~~~i~~~Dva~~~~~~~~~~~--~~  195 (206)
T 1hdo_A          134 RMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYT--VTL-----DGR-GP-SRVISKHDLGHFMLRCLTTDE--YD  195 (206)
T ss_dssp             HHHHHHHH-------TCSEEEEECCSEEECCCCCSCCE--EES-----SSC-SS-CSEEEHHHHHHHHHHTTSCST--TT
T ss_pred             HHHHHHHh-------CCCCEEEEeCCcccCCCCCcceE--ecc-----cCC-CC-CCccCHHHHHHHHHHHhcCcc--cc
Confidence            99988742       58999999999983 33221110  000     111 11 468899999999999997643  58


Q ss_pred             ccEEeeCCCc
Q 044670          236 GLNLVVDGGF  245 (302)
Q Consensus       236 G~~~~~~gG~  245 (302)
                      |++++++||.
T Consensus       196 g~~~~i~~g~  205 (206)
T 1hdo_A          196 GHSTYPSHQY  205 (206)
T ss_dssp             TCEEEEECCC
T ss_pred             ccceeeeccc
Confidence            9999999985

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.93  E-value=4.6e-26  Score=206.97  Aligned_cols=221  Identities=15%  Similarity=0.117  Sum_probs=163.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++++||||||+|+||++++++|+++| ++|++++|+......... ...++.++.+|++|+++++++++       ++|
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~-~~~~v~~~~~Dl~d~~~l~~~~~-------~~d  101 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP-DHPAVRFSETSITDDALLASLQD-------EYD  101 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC-CCTTEEEECSCTTCHHHHHHCCS-------CCS
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc-CCCceEEEECCCCCHHHHHHHhh-------CCC
Confidence            357899999999999999999999999 999999997653211110 13568899999999998777665       799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCccccc---------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEI---------------  143 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~---------------  143 (302)
                      +|||+||....      ..+.+++++.+++|+.++.++++++.+    . +.+++|++||.+.+.               
T Consensus       102 ~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~  171 (377)
T 2q1s_A          102 YVFHLATYHGN------QSSIHDPLADHENNTLTTLKLYERLKH----FKRLKKVVYSAAGCSIAEKTFDDAKATEETDI  171 (377)
T ss_dssp             EEEECCCCSCH------HHHHHCHHHHHHHHTHHHHHHHHHHTT----CSSCCEEEEEEEC--------------CCCCC
T ss_pred             EEEECCCccCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCCHHHcCCCCCCCcCccccccc
Confidence            99999996431      122356788999999999999988854    3 467999999976431               


Q ss_pred             -CC-CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc---------cC----CCCCHHHHHHHHHhccc
Q 044670          144 -AG-IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS---------SR----NSINPAILEAFLSEMGN  208 (302)
Q Consensus       144 -~~-~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~---------~~----~~~~~~~~~~~~~~~~~  208 (302)
                       +. .+...|+.||++++.+++.++.++   |+++++++||++++|..         ..    ....+.++.......+.
T Consensus       172 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  248 (377)
T 2q1s_A          172 VSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPL  248 (377)
T ss_dssp             CCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCC
T ss_pred             ccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCe
Confidence             11 345789999999999999998774   89999999999999976         21    11122333333332211


Q ss_pred             -------cCCCCCCHHHHHHH-HHHhccCCCCCccccEEeeCCCcc
Q 044670          209 -------LRGQVLNAEGIANA-ALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       209 -------~~~~~~~~~dva~~-~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                             ....+++++|+|++ ++.++..+.   +| ++++.+|..
T Consensus       249 ~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~  290 (377)
T 2q1s_A          249 PLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKE  290 (377)
T ss_dssp             CCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence                   11347789999999 998886543   68 999998865

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.93  E-value=7.3e-25  Score=200.09  Aligned_cols=171  Identities=17%  Similarity=0.160  Sum_probs=136.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HcCCEEEEEecCccH---------HHHHH---HHhC-----CC---eEEEEecCCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFH-ENGAKVVIADVQDNL---------GQALA---CKLG-----ED---VCYIHCDVTS   60 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~---------~~~~~---~~~~-----~~---~~~~~~Dl~~   60 (302)
                      ++++||||||+|+||++++++|+ ++|++|++++|+...         .+.+.   +.+.     .+   +.++.+|++|
T Consensus         1 s~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   80 (397)
T 1gy8_A            1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (397)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence            46799999999999999999999 999999999987543         23332   2221     24   8899999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           61 EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        61 ~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      ++++++++++    ++++|+||||||....      ..+.+++++.+++|+.+++++++++..    .+.++||++||.+
T Consensus        81 ~~~~~~~~~~----~~~~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~  146 (397)
T 1gy8_A           81 EDFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGG
T ss_pred             HHHHHHHHHh----cCCCCEEEECCCccCc------CcchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHH
Confidence            9998777653    4569999999996432      013456788999999999999998766    3567999999976


Q ss_pred             cccCCC------------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcc
Q 044670          141 TEIAGI------------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGIS  189 (302)
Q Consensus       141 ~~~~~~------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~  189 (302)
                      .+....                  +...|+.||++++.+++.++.++   |+++++++|+++++|..
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~~  210 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCCc
Confidence            543222                  25789999999999999999886   89999999999999864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.93  E-value=1.8e-25  Score=206.40  Aligned_cols=220  Identities=16%  Similarity=0.102  Sum_probs=162.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH---HHHHH------------HhCCCeEEEEecCCCHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG---QALAC------------KLGEDVCYIHCDVTSEDEITN   66 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~------------~~~~~~~~~~~Dl~~~~~v~~   66 (302)
                      ++|+||||||||+||++++++|+++|++|++++|+.+..   ..+.+            ....++.++.+|++|++++. 
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            467999999999999999999999999999999988732   22211            12367899999999988876 


Q ss_pred             HHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--
Q 044670           67 LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--  144 (302)
Q Consensus        67 ~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--  144 (302)
                             ..+++|+||||||...         ..+++++.+++|+.++.++++++.+     +.+++|++||... ..  
T Consensus       147 -------~~~~~d~Vih~A~~~~---------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~-G~~~  204 (427)
T 4f6c_A          147 -------LPENMDTIIHAGARTD---------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTYF  204 (427)
T ss_dssp             -------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG-GSEE
T ss_pred             -------CcCCCCEEEECCcccC---------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh-CCCc
Confidence                   3458999999999643         1246788999999999999999988     3578999999876 11  


Q ss_pred             -----------------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-------HHHHH
Q 044670          145 -----------------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-------PAILE  200 (302)
Q Consensus       145 -----------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------~~~~~  200 (302)
                                       ..+...|+.||.+.|.+++.++.    .|+++++++||+|+++........       ..++.
T Consensus       205 ~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~  280 (427)
T 4f6c_A          205 DIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMN  280 (427)
T ss_dssp             CSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHH
T ss_pred             cCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHH
Confidence                             22567899999999999998763    589999999999999976543211       12333


Q ss_pred             HHHHhccc------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC
Q 044670          201 AFLSEMGN------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       201 ~~~~~~~~------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      ........      ....+++++|+|+++++++....   .|++|++++|..+...+
T Consensus       281 ~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~s~~e  334 (427)
T 4f6c_A          281 DLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  334 (427)
T ss_dssp             HHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCEEHHH
T ss_pred             HHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCCcHHH
Confidence            33222111      11448899999999999987544   78999999987755444

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.93  E-value=2.4e-25  Score=199.24  Aligned_cols=219  Identities=11%  Similarity=0.069  Sum_probs=163.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++||||||||+||++++++|+++ |++|++++|+.+....+..  ..++.++.+|++|. +.++++++       ++|+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~-------~~d~v   71 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KCDVV   71 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH-------HCSEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc--CCCeEEEeccccCcHHHHHhhcc-------CCCEE
Confidence            47999999999999999999998 8999999998765433211  24688999999984 56666665       58999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC---------------
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI---------------  146 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~---------------  146 (302)
                      ||+||....      ....+++++.+++|+.++.++++++.+    .+ +++|++||.+.+....               
T Consensus        72 ih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           72 LPLVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             EECBCCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             EEcccccCc------cchhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            999996431      011345678999999999999998876    33 7999999976543221               


Q ss_pred             ---CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC--------CCHHHHHHHHHhccc-------
Q 044670          147 ---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS--------INPAILEAFLSEMGN-------  208 (302)
Q Consensus       147 ---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~~~~~~-------  208 (302)
                         +...|+.||++++.+++.++.+.   |+++++++||.+++|......        ....++.......+.       
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  217 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGK  217 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCC
Confidence               12379999999999999998774   899999999999999764311        012333333332211       


Q ss_pred             cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          209 LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       209 ~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      ....+++++|+|++++.++........|+++++.+|.
T Consensus       218 ~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          218 QKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             CEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            1124889999999999998754433578999999884

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.93  E-value=1.1e-24  Score=197.02  Aligned_cols=225  Identities=12%  Similarity=0.076  Sum_probs=161.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH-----HHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG-----QALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +|++|||||+|+||++++++|+++|++|++++|+.+..     ..+.+.   .+.++.++.+|++|++++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            47899999999999999999999999999999976532     111111   1246888999999999998888765   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC---------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG---------  145 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~---------  145 (302)
                        ++|+||||||....      ..+.++++..+++|+.++.++++++.+...+ +.++||++||.+.+...         
T Consensus        78 --~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~  148 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETT  148 (372)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccC
Confidence              68999999996432      1234467889999999999999999886532 24799999997655331         


Q ss_pred             --CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhccc--c------CCC
Q 044670          146 --IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMGN--L------RGQ  212 (302)
Q Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~--~------~~~  212 (302)
                        .+...|+.||++++.+++.++.++   ++.+..++|+.+++|........   ..++........+  .      ...
T Consensus       149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  225 (372)
T 1db3_A          149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (372)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceee
Confidence              236789999999999999999874   68888899988888865432111   1122222222111  1      134


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++++|+|++++.++..+.    ++++++.+|..
T Consensus       226 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          226 WGHAKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             CEEHHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             eeEHHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence            7899999999998886432    46788877765

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.93  E-value=3.9e-25  Score=196.91  Aligned_cols=223  Identities=13%  Similarity=0.121  Sum_probs=163.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |+||||||+|+||++++++|+++|++|++++|+.....   +.+..+++++.+|++|++++++++++     .++|+|||
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vih   73 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVMH   73 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCTTSEEEECCTTCHHHHHHHHHH-----SCEEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcCCCcEEEECCCCCHHHHHHHHhh-----cCCCEEEE
Confidence            68999999999999999999999999999998754322   12233678899999999998887765     37999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~  152 (302)
                      +||....      ..+.+++++.+++|+.++.++++++..    .+.+++|++||.+.+...           .+...|+
T Consensus        74 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           74 FAADSLV------GVSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             CCCCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             CCcccCc------cccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            9996431      113456788999999999999998866    356799999997665321           2357899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHHHHHH----hccc--------------c
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILEAFLS----EMGN--------------L  209 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~----~~~~--------------~  209 (302)
                      .||++++.+++.++.+   .|+++++++||.+++|......     ....+...+..    ....              .
T Consensus       144 ~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~  220 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQA---SNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTC  220 (330)
T ss_dssp             HHHHHHHHHHHHHHHT---SSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSC
T ss_pred             HHHHHHHHHHHHHHHH---hCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCce
Confidence            9999999999999876   4899999999999998632110     01112222211    1110              0


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ...+++++|+|++++.++........++++++.+|..+
T Consensus       221 ~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          221 IRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             EECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             eEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence            12467899999999988854322223688999877653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.93  E-value=2.1e-25  Score=189.83  Aligned_cols=192  Identities=15%  Similarity=0.133  Sum_probs=138.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ..|++|||||+|+||++++++|+++| ++|++++|+++....+   ....+.++.+|++|+++++++++       .+|+
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~-------~~D~   91 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP---YPTNSQIIMGDVLNHAALKQAMQ-------GQDI   91 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS---CCTTEEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc---ccCCcEEEEecCCCHHHHHHHhc-------CCCE
Confidence            45789999999999999999999999 8999999988764332   23478999999999999888887       7899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC------------
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS------------  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~------------  148 (302)
                      ||||||...             +           ...++.+++.+.+.+.++||++||...+.+.++.            
T Consensus        92 vv~~a~~~~-------------~-----------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~  147 (236)
T 3qvo_A           92 VYANLTGED-------------L-----------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEP  147 (236)
T ss_dssp             EEEECCSTT-------------H-----------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGG
T ss_pred             EEEcCCCCc-------------h-----------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccch
Confidence            999998411             1           1224566777766778899999998876554432            


Q ss_pred             -hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          149 -PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       149 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                       ..|..+|           ..+.+.||++++|+||++.++........        ....+..+++++++|+|+++++++
T Consensus       148 ~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~~~~~~--------~~~~~~~~~~i~~~DvA~~i~~ll  208 (236)
T 3qvo_A          148 LKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDIIDYELT--------SRNEPFKGTIVSRKSVAALITDII  208 (236)
T ss_dssp             GHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCCCCEEE--------CTTSCCSCSEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCcceEEe--------ccCCCCCCcEECHHHHHHHHHHHH
Confidence             2333333           22235799999999999998754322100        001122256789999999999999


Q ss_pred             cCCCCCccccEEeeCCCccc
Q 044670          228 TDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++..++ |+.+.++++...
T Consensus       209 ~~~~~~~-g~~~~i~~~~~~  227 (236)
T 3qvo_A          209 DKPEKHI-GENIGINQPGTD  227 (236)
T ss_dssp             HSTTTTT-TEEEEEECSSCC
T ss_pred             cCccccc-CeeEEecCCCCC
Confidence            8876554 889999888654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.93  E-value=1.5e-25  Score=196.40  Aligned_cols=197  Identities=17%  Similarity=0.116  Sum_probs=151.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .++||||||||+||++++++|+++|++|++++|+                  .+|++|+++++++++..     ++|+||
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~Dl~d~~~~~~~~~~~-----~~d~vi   68 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------DLDITNVLAVNKFFNEK-----KPNVVI   68 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------TCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------cCCCCCHHHHHHHHHhc-----CCCEEE
Confidence            5789999999999999999999999999999986                  37999999988888755     799999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAY  151 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y  151 (302)
                      |+||....      +.+.+++++.+++|+.++.++++++.+.    +. ++|++||.+.+.+..           +...|
T Consensus        69 h~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y  137 (292)
T 1vl0_A           69 NCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV----GA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAY  137 (292)
T ss_dssp             ECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred             ECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEechHHeECCCCCCCCCCCCCCCCccHH
Confidence            99996431      1234578899999999999999999884    34 999999986654322           35689


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHh
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAALYL  226 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l  226 (302)
                      +.||++++.+++.++.       +++.++|+.+++| .. . ..+.+........+.     ....+++++|+|++++++
T Consensus       138 ~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  207 (292)
T 1vl0_A          138 GKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GN-N-FVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV  207 (292)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SS-C-HHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-Cc-C-hHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHH
Confidence            9999999999988752       4789999999988 22 1 112233332222111     114578999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++.+    .|+++++++|..+
T Consensus       208 ~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          208 IDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHT----CCEEEECCCBSCE
T ss_pred             HhcC----CCcEEEecCCCCc
Confidence            8754    5889999998653

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.93  E-value=8.9e-25  Score=194.99  Aligned_cols=224  Identities=15%  Similarity=0.035  Sum_probs=163.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH-HHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ-ALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .+++||||||+|+||++++++|+++|++|++++|+.+... ...+.+  ..++.++.+|++|+++++++++..     ++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            3689999999999999999999999999999999765311 111222  246889999999999998888765     68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCC-----------
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGI-----------  146 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~-----------  146 (302)
                      |+|||+||....      ..+.+++++.+++|+.++.++++++.+.    + .+++|++||.+.+....           
T Consensus        88 d~Vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           88 QEVYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             SEEEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CEEEECccccch------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            999999996431      1112356789999999999999999874    3 37999999976654322           


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhccc--c------CCCCCC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMGN--L------RGQVLN  215 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~--~------~~~~~~  215 (302)
                      +...|+.||++++.+++.++.++   ++++++++|+.+++|........   ..++........+  .      ...+++
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence            24689999999999999998774   78999999999999875432211   1122222222111  1      124789


Q ss_pred             HHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          216 AEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       216 ~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++|+|++++.++..+.    ++++++.+|..+
T Consensus       235 v~Dva~a~~~~~~~~~----~~~~ni~~~~~~  262 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQDK----ADDYVVATGVTT  262 (335)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCEE
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEEeCCCCc
Confidence            9999999999986543    467888877653

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.7e-24  Score=196.26  Aligned_cols=224  Identities=13%  Similarity=0.030  Sum_probs=164.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     .+.+...    ...++.++.+|++|++++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997542     1111110    1246888999999999998888765   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------  144 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------  144 (302)
                        ++|+|||+||....      ..+.+++++.+++|+.++.++++++.+... .+.++||++||.+.+..          
T Consensus       102 --~~d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~~  172 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKETT  172 (375)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred             --CCCEEEECCCcccc------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCccC
Confidence              68999999996431      113456788999999999999999988653 22379999999876542          


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhccc--c------CCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMGN--L------RGQ  212 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~--~------~~~  212 (302)
                       ..+...|+.||++++.+++.++.++   ++++.+++|+.+++|........   ..++........+  .      ...
T Consensus       173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  249 (375)
T 1t2a_A          173 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRD  249 (375)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEEC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceee
Confidence             1245689999999999999999774   78999999999998865432211   1222222222111  1      134


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++++|+|++++.++..+.    ++++++.+|..
T Consensus       250 ~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          250 WGHAKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             CEEHHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             eEEHHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence            7899999999999886543    36778877765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.92  E-value=9e-25  Score=193.42  Aligned_cols=211  Identities=14%  Similarity=0.095  Sum_probs=133.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|+||||||||+||++++++|+++|++|++++|+.+.         .+  ++.+|++|++++.++++..     ++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~--~~~~Dl~d~~~~~~~~~~~-----~~d~vi   65 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------PK--FEQVNLLDSNAVHHIIHDF-----QPHVIV   65 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------CHHHHHHH-----CCSEEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------CC--eEEecCCCHHHHHHHHHhh-----CCCEEE
Confidence            6899999999999999999999999999999986543         11  6789999999988888754     699999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------CCCChhHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------GIGSPAYT  152 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------~~~~~~Y~  152 (302)
                      |+||....      ..+.+++++.+++|+.++.++++++.+.    + +++|++||.+.+.+          ..+...|+
T Consensus        66 h~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           66 HCAAERRP------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             ECC-------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             ECCcccCh------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            99996432      2245678899999999999999999874    2 48999999876544          34567899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC-CCCHHHHHHHH-Hhcc-----ccCCCCCCHHHHHHHHHH
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN-SINPAILEAFL-SEMG-----NLRGQVLNAEGIANAALY  225 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~dva~~~~~  225 (302)
                      .||++++.+++.++       +++..++|+.|+++..... .....+..... ....     ...+.+++++|+|+++++
T Consensus       135 ~sK~~~e~~~~~~~-------~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~  207 (315)
T 2ydy_A          135 KTKLDGEKAVLENN-------LGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQ  207 (315)
T ss_dssp             HHHHHHHHHHHHHC-------TTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-------CCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHH
Confidence            99999999998874       3457889999998765411 11233333332 2111     122568899999999999


Q ss_pred             hccCC-CCCccccEEeeCCCccc
Q 044670          226 LATDE-ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       226 l~s~~-~~~~~G~~~~~~gG~~~  247 (302)
                      +++.. .....|+++++++|..+
T Consensus       208 ~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          208 LAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHhhccccCCCCeEEEcCCCcc
Confidence            98643 12246889999998764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.92  E-value=4.8e-24  Score=190.53  Aligned_cols=225  Identities=15%  Similarity=0.146  Sum_probs=157.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|||||+|+||++++++|+++|++|++++|...    ....+....+.++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            7999999999999999999999999999876432    222222222456788999999999988877642     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------C-CCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------G-IGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~-~~~  148 (302)
                      ||||||....      ....+++++.+++|+.+++++++++...    +.++||++||.+.+..           . ++.
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  146 (338)
T 1udb_A           77 VIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCccCcc------ccchhcHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence            9999996431      0123456788999999999999877653    4679999999765421           1 236


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC------CCCCHHHHH---HHHH-hccc----------
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR------NSINPAILE---AFLS-EMGN----------  208 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~~~---~~~~-~~~~----------  208 (302)
                      ..|+.||++++.+++.++.+.  .++++++++|+.++++....      ......+..   .... ....          
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  224 (338)
T 1udb_A          147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSS
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccC
Confidence            789999999999999999873  27999999999998873210      000111111   1111 1110          


Q ss_pred             ----cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          209 ----LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       209 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                          ..+.+++++|+|++++.++........++++++.+|..
T Consensus       225 ~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~  266 (338)
T 1udb_A          225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             SSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCC
T ss_pred             CCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCc
Confidence                01246789999999988875321111347889887764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.92  E-value=1.9e-25  Score=201.35  Aligned_cols=220  Identities=14%  Similarity=0.174  Sum_probs=160.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|+||||||+|+||++++++|+++| ++|++++|+.+...  ...+. .+. +.+|++|+++++++++.  ..++++|+
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~-~~~-~~~d~~~~~~~~~~~~~--~~~~~~d~  118 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV-DLN-IADYMDKEDFLIQIMAG--EEFGDVEA  118 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT-TSC-CSEEEEHHHHHHHHHTT--CCCSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc-Cce-EeeecCcHHHHHHHHhh--cccCCCCE
Confidence            57899999999999999999999999 99999998765421  11111 223 67899999987777653  12457999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CCh
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSP  149 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~  149 (302)
                      |||+||....        +.+++++.+++|+.++.++++++.+.    +. ++|++||.+.+....           +..
T Consensus       119 Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~  185 (357)
T 2x6t_A          119 IFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLN  185 (357)
T ss_dssp             EEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSS
T ss_pred             EEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCCCCCC
Confidence            9999996431        22356889999999999999999883    34 899999987654332           256


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHhccc-------c-CCCCCCHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSEMGN-------L-RGQVLNAE  217 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~~~-------~-~~~~~~~~  217 (302)
                      .|+.||++++.+++.++.+   .|+++++++||++++|......    ....+........+.       . ...+++++
T Consensus       186 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  262 (357)
T 2x6t_A          186 VFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  262 (357)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence            8999999999999998865   5899999999999998754211    112233333322111       1 23578999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |+|+++++++....    |+++++++|..+
T Consensus       263 Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          263 DVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             HHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            99999999986543    789999888653

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.92  E-value=6.3e-25  Score=190.11  Aligned_cols=195  Identities=15%  Similarity=0.117  Sum_probs=151.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .|++|||||+|+||++++++|+++|++|++++|+....      ....+.++.+|++|++++.++++       ++|+||
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   68 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGA------AEAHEEIVACDLADAQAVHDLVK-------DCDGII   68 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCC------CCTTEEECCCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccc------cCCCccEEEccCCCHHHHHHHHc-------CCCEEE
Confidence            36899999999999999999999999999999987532      11357889999999999888776       699999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------------CChh
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------GSPA  150 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------------~~~~  150 (302)
                      ||||...          .+++++.+++|+.++.++++++.+    .+.++||++||...+...+            +...
T Consensus        69 ~~a~~~~----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~  134 (267)
T 3ay3_A           69 HLGGVSV----------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSL  134 (267)
T ss_dssp             ECCSCCS----------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSH
T ss_pred             ECCcCCC----------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCCh
Confidence            9999642          124678999999999999999886    3567999999987654322            3578


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |+.||++++.+++.++.+   +|+++++++||+++....     ....           ...+++++|+|++++.++..+
T Consensus       135 Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~-----~~~~-----------~~~~~~~~dva~~~~~~~~~~  195 (267)
T 3ay3_A          135 YGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK-----DARM-----------MATWLSVDDFMRLMKRAFVAP  195 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC-----SHHH-----------HHHBCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC-----CCCe-----------eeccccHHHHHHHHHHHHhCC
Confidence            999999999999988743   689999999999862210     1111           033789999999999988654


Q ss_pred             CCCccccEEeeCCCc
Q 044670          231 ASDVTGLNLVVDGGF  245 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~  245 (302)
                      ..  .+.++++.++.
T Consensus       196 ~~--~~~~~~~~~~~  208 (267)
T 3ay3_A          196 KL--GCTVVYGASAN  208 (267)
T ss_dssp             CC--CEEEEEECCSC
T ss_pred             CC--CceeEecCCCc
Confidence            32  24555555443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.92  E-value=3e-24  Score=195.08  Aligned_cols=226  Identities=15%  Similarity=0.015  Sum_probs=166.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHHh---CC-CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALACKL---GE-DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~---~~-~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||||||+|+||++++++|+++|++|++++|+.+.     .+.+....   +. ++.++.+|++|.+++.++++..   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997653     22111111   12 6889999999999998888765   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccC---------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIA---------  144 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~---------  144 (302)
                        ++|+|||+||....      ..+.++++..+++|+.++.++++++.+...++ +.++||++||.+.+..         
T Consensus       106 --~~d~Vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccCc------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              68999999996431      12345688999999999999999999976432 2469999999875432         


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHHHHhccc--------cCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAFLSEMGN--------LRGQ  212 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~~~~~~~--------~~~~  212 (302)
                       ..+...|+.||++++.+++.++.++   ++.+..+.|+.+++|........   ..++.........        ..+.
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~  254 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  254 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceee
Confidence             2356789999999999999999874   67888888888888765332111   1122222222111        1134


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++++|+|+++++++..+.    ++++++.+|..+
T Consensus       255 ~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~~  285 (381)
T 1n7h_A          255 WGFAGDYVEAMWLMLQQEK----PDDYVVATEEGH  285 (381)
T ss_dssp             CEEHHHHHHHHHHHHTSSS----CCEEEECCSCEE
T ss_pred             eEEHHHHHHHHHHHHhCCC----CCeEEeeCCCCC
Confidence            7899999999999987543    478899888653

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.92  E-value=7.9e-25  Score=193.34  Aligned_cols=217  Identities=13%  Similarity=0.135  Sum_probs=160.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +|++|||||+|+||++++++|+++  |++|++++|+..... ..    .++.++.+|++|++++++++++.     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   71 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV----NSGPFEVVNALDFNQIEHLVEVH-----KITD   71 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH----HSSCEEECCTTCHHHHHHHHHHT-----TCCE
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc----CCCceEEecCCCHHHHHHHHhhc-----CCCE
Confidence            578999999999999999999999  899999999766532 21    24578899999999988887654     6899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------CCC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------IGS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------~~~  148 (302)
                      |||+||....       ...+++++.+++|+.++.++++++.+    .+.+++|++||.+.+...            .+.
T Consensus        72 vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           72 IYLMAALLSA-------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             EEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             EEECCccCCC-------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            9999996421       12356788999999999999998876    346799999998765432            235


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC----HHHHHHHHH-hcccc------CCCCCCHH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN----PAILEAFLS-EMGNL------RGQVLNAE  217 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~-~~~~~------~~~~~~~~  217 (302)
                      ..|+.||++.+.+++.++.++   |+++++++||.++++........    ...+..... .....      ...+++++
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  217 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMD  217 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHH
T ss_pred             chhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHH
Confidence            689999999999999998774   89999999999999764322111    111112222 11111      12367899


Q ss_pred             HHHHHHHHhccCCCCCc-cccEEeeCC
Q 044670          218 GIANAALYLATDEASDV-TGLNLVVDG  243 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~-~G~~~~~~g  243 (302)
                      |+|++++.++..+.... .|+++++.+
T Consensus       218 Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          218 DAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHHhCcccccccCceEEeCC
Confidence            99999999886543222 258888875

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.92  E-value=1e-25  Score=201.44  Aligned_cols=217  Identities=16%  Similarity=0.133  Sum_probs=148.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH---HHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG---QALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +|+||||||+|+||++++++|+++|++|+++.|+.+..   ..+... ...++.++.+|++|++++.++++       .+
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            68999999999999999999999999999988875432   111111 12468889999999998877776       68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----C--------
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----G--------  145 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----~--------  145 (302)
                      |+|||+|+...     .  ...+..++.+++|+.|++++++++.+..   +.++||++||.++..+     .        
T Consensus        82 D~Vih~A~~~~-----~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~  151 (338)
T 2rh8_A           82 DFVFHVATPVH-----F--ASEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKN  151 (338)
T ss_dssp             SEEEEESSCCC-----C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTT
T ss_pred             CEEEEeCCccC-----C--CCCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhh
Confidence            99999998532     1  1112234589999999999999998742   2579999999763211     0        


Q ss_pred             --------C---CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhc----c
Q 044670          146 --------I---GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEM----G  207 (302)
Q Consensus       146 --------~---~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~----~  207 (302)
                              +   ....|+.||++.|.+++.++.+   +|+++++++||.|+||...... .. .....   ....    .
T Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~-~~-~~~~~~~~~~g~~~~~~  226 (338)
T 2rh8_A          152 WTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDV-PS-SIGLAMSLITGNEFLIN  226 (338)
T ss_dssp             TTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSC-CH-HHHHHHHHHHTCHHHHH
T ss_pred             ccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCC-Cc-hHHHHHHHHcCCccccc
Confidence                    0   1115999999999999888765   4899999999999999765431 11 11111   0000    0


Q ss_pred             --------ccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCC
Q 044670          208 --------NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       208 --------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                              .....+++++|+|++++++++...  ..|.+ ++.++
T Consensus       227 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~-~~~~~  268 (338)
T 2rh8_A          227 GMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES--ASGRY-ICCAA  268 (338)
T ss_dssp             HHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT--CCEEE-EECSE
T ss_pred             cccccccccCcccEEEHHHHHHHHHHHHcCCC--cCCcE-EEecC
Confidence                    000148899999999999886432  34554 44333

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.92  E-value=2.9e-24  Score=208.58  Aligned_cols=221  Identities=12%  Similarity=0.083  Sum_probs=165.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHH-HHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE-ITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~~id   79 (302)
                      ++++||||||+|+||++++++|+++ |++|++++|+.+....+..  ..++.++.+|++|.++ ++++++       ++|
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~--~~~v~~v~~Dl~d~~~~~~~~~~-------~~D  384 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK-------KCD  384 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT--CTTEEEEECCTTTCHHHHHHHHH-------HCS
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc--CCceEEEECCCCCcHHHHHHhhc-------CCC
Confidence            6789999999999999999999998 8999999998765432211  2468899999999765 555554       589


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--------------  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--------------  145 (302)
                      +|||+||....      ....+++++.+++|+.++.++++++.+.    + +++|++||.+.+...              
T Consensus       385 ~Vih~Aa~~~~------~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T 1z7e_A          385 VVLPLVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  453 (660)
T ss_dssp             EEEECCCCCCT------HHHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTCCEEE
T ss_pred             EEEECceecCc------cccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCcccccc
Confidence            99999996431      0123457789999999999999998873    3 799999997664321              


Q ss_pred             ----CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC--------CCCCHHHHHHHHHhccc-----
Q 044670          146 ----IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR--------NSINPAILEAFLSEMGN-----  208 (302)
Q Consensus       146 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~~~~~~~-----  208 (302)
                          .+...|+.||.+.|.+++.++.++   |+++++++||+++||....        ......+........+.     
T Consensus       454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  530 (660)
T 1z7e_A          454 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  530 (660)
T ss_dssp             CCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGG
T ss_pred             CcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCC
Confidence                123479999999999999998774   8999999999999997642        11112333444333221     


Q ss_pred             --cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCc
Q 044670          209 --LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       209 --~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                        ....+++++|+|++++++++.......|+++++++|.
T Consensus       531 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence              1124788999999999998765444578999999985

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.92  E-value=5.3e-24  Score=188.83  Aligned_cols=212  Identities=16%  Similarity=0.193  Sum_probs=158.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |.++++|||||+|+||++++++|+++|++|+++.|+.                 .+|++|.+++.+++++.     ++|+
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            5788999999999999999999999999999987752                 26999999988887754     7999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-------------C-
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-------------I-  146 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-------------~-  146 (302)
                      |||+|+....     .....+++++.+++|+.++.++++++.+    .+.+++|++||.+.+...             + 
T Consensus        59 vih~a~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  129 (321)
T 1e6u_A           59 VYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  129 (321)
T ss_dssp             EEECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEEcCeecCC-----cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence            9999996421     1112345678999999999999999887    345799999998765321             1 


Q ss_pred             -C-ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC----CCHHHHHHHHHh-----cc-c-c----
Q 044670          147 -G-SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS----INPAILEAFLSE-----MG-N-L----  209 (302)
Q Consensus       147 -~-~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~-----~~-~-~----  209 (302)
                       + ...|+.||.+.|.+++.++.++   |+++++++||++++|......    ..+.++......     .+ . +    
T Consensus       130 ~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~  206 (321)
T 1e6u_A          130 EPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGT  206 (321)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSC
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCC
Confidence             1 3589999999999999998764   899999999999998765321    113344433321     11 1 1    


Q ss_pred             -CCCCCCHHHHHHHHHHhccCCCCC------ccccEEeeCCCcc
Q 044670          210 -RGQVLNAEGIANAALYLATDEASD------VTGLNLVVDGGFS  246 (302)
Q Consensus       210 -~~~~~~~~dva~~~~~l~s~~~~~------~~G~~~~~~gG~~  246 (302)
                       ...+++++|+|++++.++......      ..|+++++.+|..
T Consensus       207 ~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          207 PMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             CEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             EEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence             124679999999999988643210      1368899987765

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.91  E-value=4.9e-24  Score=190.82  Aligned_cols=224  Identities=17%  Similarity=0.087  Sum_probs=158.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC-------CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG-------AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |++++||||||+|+||++++++|+++|       ++|++++|+.+....   ....++.++.+|++|+++++++++    
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~~----   84 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---GFSGAVDARAADLSAPGEAEKLVE----   84 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---ccCCceeEEEcCCCCHHHHHHHHh----
Confidence            478899999999999999999999999       899999997643221   123568889999999999887775    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCC-C-----
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAG-I-----  146 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~-~-----  146 (302)
                        +++|+|||+||...       ..+.+++++.+++|+.++.++++++.+...+. +.++||++||.+.+... +     
T Consensus        85 --~~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E  155 (342)
T 2hrz_A           85 --ARPDVIFHLAAIVS-------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPD  155 (342)
T ss_dssp             --TCCSEEEECCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCT
T ss_pred             --cCCCEEEECCccCc-------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCC
Confidence              37999999999642       12346788999999999999999998754211 25799999998765442 2     


Q ss_pred             -----CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccC-CcccCCCC---CHHHHHHHHHhccc--cCC----
Q 044670          147 -----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVS-GISSRNSI---NPAILEAFLSEMGN--LRG----  211 (302)
Q Consensus       147 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t-~~~~~~~~---~~~~~~~~~~~~~~--~~~----  211 (302)
                           +...|+.||++++.+++.++.+   .++....++|..+.+ |.......   ...++.......+.  +..    
T Consensus       156 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (342)
T 2hrz_A          156 EFHTTPLTSYGTQKAICELLLSDYSRR---GFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR  232 (342)
T ss_dssp             TCCCCCSSHHHHHHHHHHHHHHHHHHT---TSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHh---cCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence                 5678999999999999998865   356666676666665 33211100   11222222222211  111    


Q ss_pred             -CCCCHHHHHHHHHHhccCCCC-CccccEEeeCC
Q 044670          212 -QVLNAEGIANAALYLATDEAS-DVTGLNLVVDG  243 (302)
Q Consensus       212 -~~~~~~dva~~~~~l~s~~~~-~~~G~~~~~~g  243 (302)
                       .+++++|+|++++.++..... ...++++++.|
T Consensus       233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             eeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence             156899999999988854321 01367888854

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.91  E-value=1.3e-23  Score=176.31  Aligned_cols=206  Identities=15%  Similarity=0.093  Sum_probs=135.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++||||||||+||++++++|+++|++|++++|++++...+.    ..+.++.+|++|+++  +.+       .++|+|||
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~----~~~~~~~~D~~d~~~--~~~-------~~~d~vi~   67 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH----KDINILQKDIFDLTL--SDL-------SDQNVVVD   67 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC----SSSEEEECCGGGCCH--HHH-------TTCSEEEE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc----CCCeEEeccccChhh--hhh-------cCCCEEEE
Confidence            36999999999999999999999999999999987765543    578999999999887  222       37999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------------CChhH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------GSPAY  151 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------------~~~~Y  151 (302)
                      |||....               ...+|+.++    +.+++.+.+.+.+++|++||.++..+.+            +...|
T Consensus        68 ~ag~~~~---------------~~~~~~~~~----~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y  128 (221)
T 3ew7_A           68 AYGISPD---------------EAEKHVTSL----DHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYY  128 (221)
T ss_dssp             CCCSSTT---------------TTTSHHHHH----HHHHHHHCSCCSSEEEEECCCC-------------------CCCS
T ss_pred             CCcCCcc---------------ccchHHHHH----HHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHH
Confidence            9996321               123355554    4455556556678999999987765433            23569


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +.+|.+.+.+. .+..  ...|+++++++||+++++.......  ......... ......+++++|+|++++.++..+.
T Consensus       129 ~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~~~~--~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~l~~~~  202 (221)
T 3ew7_A          129 PTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERTGDY--QIGKDHLLF-GSDGNSFISMEDYAIAVLDEIERPN  202 (221)
T ss_dssp             CCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCccCce--Eecccccee-cCCCCceEeHHHHHHHHHHHHhCcc
Confidence            99999998862 2321  1569999999999999983211100  000000000 0111348899999999999997654


Q ss_pred             CCccccEEeeCCCcccCC
Q 044670          232 SDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~~~  249 (302)
                        ..|++|++.+-.....
T Consensus       203 --~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          203 --HLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             --CTTSEEECCC------
T ss_pred             --ccCCEEEECCCCcccc
Confidence              3699999888655443

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.91  E-value=1.4e-24  Score=182.71  Aligned_cols=200  Identities=13%  Similarity=0.054  Sum_probs=142.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +||||||||+||++++++|+++|++|++++|+.+....+   ....++++.+|++|+++  +.       ++++|+||||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~~~D~~d~~~--~~-------~~~~d~vi~~   69 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---LGATVATLVKEPLVLTE--AD-------LDSVDAVVDA   69 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---TCTTSEEEECCGGGCCH--HH-------HTTCSEEEEC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc---cCCCceEEecccccccH--hh-------cccCCEEEEC
Confidence            699999999999999999999999999999988766543   23578999999999887  22       2379999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC--------------Chh
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG--------------SPA  150 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~--------------~~~  150 (302)
                      ||....   +.          ..++|+.++.+    +++.+.+.+ +++|++||.++....+.              ...
T Consensus        70 ag~~~~---~~----------~~~~n~~~~~~----l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
T 3h2s_A           70 LSVPWG---SG----------RGYLHLDFATH----LVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPW  131 (224)
T ss_dssp             CCCCTT---SS----------CTHHHHHHHHH----HHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTT
T ss_pred             CccCCC---cc----------hhhHHHHHHHH----HHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchh
Confidence            997521   10          12457666544    555555566 99999999877655443              678


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |+.+|.+.+.+ +.+   ....|+++++++||+++|+.........   .... ........+++++|+|++++.++..+
T Consensus       132 y~~sK~~~e~~-~~~---~~~~~i~~~ivrp~~v~g~~~~~~~~~~---~~~~-~~~~~~~~~i~~~DvA~~~~~~l~~~  203 (224)
T 3h2s_A          132 YDGALYQYYEY-QFL---QMNANVNWIGISPSEAFPSGPATSYVAG---KDTL-LVGEDGQSHITTGNMALAILDQLEHP  203 (224)
T ss_dssp             HHHHHHHHHHH-HHH---TTCTTSCEEEEEECSBCCCCCCCCEEEE---SSBC-CCCTTSCCBCCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHH-HHH---HhcCCCcEEEEcCccccCCCcccCceec---cccc-ccCCCCCceEeHHHHHHHHHHHhcCc
Confidence            99999988844 222   2457999999999999998432210000   0000 00111145899999999999999765


Q ss_pred             CCCccccEEeeCCC
Q 044670          231 ASDVTGLNLVVDGG  244 (302)
Q Consensus       231 ~~~~~G~~~~~~gG  244 (302)
                      .  ..|++|++.+-
T Consensus       204 ~--~~g~~~~~~~~  215 (224)
T 3h2s_A          204 T--AIRDRIVVRDA  215 (224)
T ss_dssp             C--CTTSEEEEEEC
T ss_pred             c--ccCCEEEEecC
Confidence            4  36888887664

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.91  E-value=9.1e-24  Score=189.28  Aligned_cols=217  Identities=16%  Similarity=0.079  Sum_probs=156.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++++||||||+|+||++++++|+++|++|++++|+..........+  ..++.++.+|+.+..            +.++
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~~   92 (343)
T 2b69_A           25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YIEV   92 (343)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CCCC
T ss_pred             cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hcCC
Confidence            46789999999999999999999999999999998643211111111  246889999998753            3479


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc---------------
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI---------------  143 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~---------------  143 (302)
                      |+|||+|+....   ..   ..+++++.+++|+.++.++++++.+.    + .++|++||.+.+.               
T Consensus        93 d~vih~A~~~~~---~~---~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~  161 (343)
T 2b69_A           93 DQIYHLASPASP---PN---YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHV  161 (343)
T ss_dssp             SEEEECCSCCSH---HH---HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBC
T ss_pred             CEEEECccccCc---hh---hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccccC
Confidence            999999996431   00   01245688999999999999998874    2 3899999976542               


Q ss_pred             -CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccc--c-----CCCC
Q 044670          144 -AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGN--L-----RGQV  213 (302)
Q Consensus       144 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~--~-----~~~~  213 (302)
                       +..+...|+.||++++.+++.++.+.   |+++++++||++++|.......  ...++.......+.  +     ...+
T Consensus       162 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (343)
T 2b69_A          162 NPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAF  238 (343)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEEC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEee
Confidence             22245679999999999999998773   8999999999999997543211  12333333332211  0     1347


Q ss_pred             CCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          214 LNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       214 ~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++++|+|++++.++..+    .++.+++.+|..+
T Consensus       239 v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~~  268 (343)
T 2b69_A          239 QYVSDLVNGLVALMNSN----VSSPVNLGNPEEH  268 (343)
T ss_dssp             EEHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             EeHHHHHHHHHHHHhcC----CCCeEEecCCCCC
Confidence            79999999999988643    2678888887653

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.91  E-value=1.2e-23  Score=186.19  Aligned_cols=213  Identities=16%  Similarity=0.182  Sum_probs=156.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +||||||+|+||++++++|+++  |++|++++|+.....        .+.++.+|++|++++.+++++.     ++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--------~~~~~~~D~~d~~~~~~~~~~~-----~~d~vi   67 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG--------GIKFITLDVSNRDEIDRAVEKY-----SIDAIF   67 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT--------TCCEEECCTTCHHHHHHHHHHT-----TCCEEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc--------CceEEEecCCCHHHHHHHHhhc-----CCcEEE
Confidence            4899999999999999999999  899999988765421        3567899999999988877642     699999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------------CChh
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------GSPA  150 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------------~~~~  150 (302)
                      |+|+....       ...++++..+++|+.++.++++++.+    .+.+++|++||.+.+....            +...
T Consensus        68 h~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           68 HLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             ECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             ECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            99996421       12346788999999999999999876    3467999999987654321            3578


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHH---HHHHHHhcc-c-c-----CCCCCCHHHH
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAI---LEAFLSEMG-N-L-----RGQVLNAEGI  219 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~---~~~~~~~~~-~-~-----~~~~~~~~dv  219 (302)
                      |+.||++.+.+++.++.+   +|+++++++|+.++++....... ....   +........ . +     ...+++++|+
T Consensus       137 Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  213 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEK---FGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDA  213 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---cCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHH
Confidence            999999999999998876   48999999998998875432211 1111   112121111 0 0     1235689999


Q ss_pred             HHHHHHhccCCCC-CccccEEeeCCC
Q 044670          220 ANAALYLATDEAS-DVTGLNLVVDGG  244 (302)
Q Consensus       220 a~~~~~l~s~~~~-~~~G~~~~~~gG  244 (302)
                      |++++.++..+.. ..+|+++++.|+
T Consensus       214 a~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          214 LKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHhCCccccccCceEecCCc
Confidence            9999888854332 235688999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=9.7e-24  Score=186.06  Aligned_cols=217  Identities=14%  Similarity=0.158  Sum_probs=156.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHH-HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQ-ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ++|||||||+||++++++|+++| ++|++++|+..... ....    .+. +.+|++|.++++++++...  ++++|+||
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~----~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~vi   73 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DLN-IADYMDKEDFLIQIMAGEE--FGDVEAIF   73 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TSC-CSEEEEHHHHHHHHHTTCC--CSSCCEEE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC----cce-eccccccHHHHHHHHhccc--cCCCcEEE
Confidence            48999999999999999999999 99999998765421 1111    122 6789999988777665110  12599999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAY  151 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y  151 (302)
                      |+|+....        ..+++++.+++|+.++.++++++.+.    +. ++|++||.+.+....           +...|
T Consensus        74 ~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y  140 (310)
T 1eq2_A           74 HEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (310)
T ss_dssp             ECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             ECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChh
Confidence            99996431        22356789999999999999999874    34 899999986543322           25689


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC----CCCHHHHHHHHHhcc-------cc-CCCCCCHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN----SINPAILEAFLSEMG-------NL-RGQVLNAEGI  219 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~~-------~~-~~~~~~~~dv  219 (302)
                      +.||.+.+.+++.++.+   +|+++++++||++++|.....    ...+.++.......+       .. ...+++++|+
T Consensus       141 ~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv  217 (310)
T 1eq2_A          141 GYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV  217 (310)
T ss_dssp             HHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred             HHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence            99999999999998855   589999999999999875421    111223222222111       01 2356889999


Q ss_pred             HHHHHHhccCCCCCccccEEeeCCCcccC
Q 044670          220 ANAALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       220 a~~~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      |++++.++..+.    |+++++.+|..++
T Consensus       218 a~~~~~~~~~~~----~~~~~i~~~~~~s  242 (310)
T 1eq2_A          218 ADVNLWFLENGV----SGIFNLGTGRAES  242 (310)
T ss_dssp             HHHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHHHhcCC----CCeEEEeCCCccC
Confidence            999999986543    7899998886643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.90  E-value=1.2e-24  Score=190.24  Aligned_cols=249  Identities=11%  Similarity=0.011  Sum_probs=170.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++++||||| +|+||++++++|+++|++|++++|+.+..       ...+.++.+|++|++++.++++      +++|+
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            6788999999 59999999999999999999999987652       3578899999999998877665      25999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CCh
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSP  149 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~  149 (302)
                      |||+|+..           ..+++..+++|+.++.++++++..    .+.+++|++||.+.+....           +..
T Consensus        67 vih~a~~~-----------~~~~~~~~~~n~~~~~~ll~a~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (286)
T 3gpi_A           67 LVYCVAAS-----------EYSDEHYRLSYVEGLRNTLSALEG----APLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKD  131 (286)
T ss_dssp             EEECHHHH-----------HHC-----CCSHHHHHHHHHHTTT----SCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCS
T ss_pred             EEEeCCCC-----------CCCHHHHHHHHHHHHHHHHHHHhh----CCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCC
Confidence            99999852           234577889999999998887763    4568999999986543322           356


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc----cccCCCCCCHHHHHHHHHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM----GNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~dva~~~~~  225 (302)
                      .|+.||.+.|.+ +..        +++++++|+++++|...      .++..+....    ......+++++|+|+++++
T Consensus       132 ~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~  196 (286)
T 3gpi_A          132 FSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAY  196 (286)
T ss_dssp             HHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHH
T ss_pred             hhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHH
Confidence            899999999888 542        88999999999998753      2222222210    1112457899999999999


Q ss_pred             hccCCCCCccccEEeeCCCcccCCC------------Ccc-ccC-CCccceeeccCCccccchhHHH--HHHHHHHhhhh
Q 044670          226 LATDEASDVTGLNLVVDGGFSVANP------------SLM-KFA-SPFHLIKAIGDGCRSFLGISFI--AMMCLIHKIQK  289 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG~~~~~~------------~~~-~~~-~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~  289 (302)
                      ++........|+++++.+|..++..            ... ... .+.......-++. +.+|+.+.  .+++++.++.+
T Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~d~~k~-~~lG~~p~~~~l~e~l~~~~~  275 (286)
T 3gpi_A          197 LIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPVQGNKKLSNARL-LASGYQLIYPDYVSGYGALLA  275 (286)
T ss_dssp             HHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCCCBCSSCEECCHHH-HHTTCCCSSCSHHHHHHHHHH
T ss_pred             HHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCcccCCCeEeeHHHH-HHcCCCCcCCcHHHHHHHHHH
Confidence            9975322346899999988753211            100 000 0111111111222 25677665  48888888887


Q ss_pred             ccccc
Q 044670          290 VIPVV  294 (302)
Q Consensus       290 ~~~~~  294 (302)
                      +...-
T Consensus       276 ~~~~~  280 (286)
T 3gpi_A          276 AMREG  280 (286)
T ss_dssp             HHTC-
T ss_pred             HHhcc
Confidence            76543

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.90  E-value=3.9e-23  Score=182.29  Aligned_cols=215  Identities=16%  Similarity=0.094  Sum_probs=154.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++++||||||||+||++++++|+++|+      +....        ...+.++.+|++|++++.++++..     ++|+
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~-----~~d~   64 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED--------WVFVSSKDADLTDTAQTRALFEKV-----QPTH   64 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE--------EEECCTTTCCTTSHHHHHHHHHHS-----CCSE
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc--------ccccCceecccCCHHHHHHHHhhc-----CCCE
Confidence            5789999999999999999999999998      11100        012233478999999988888743     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------------
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------------  144 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------  144 (302)
                      |||+|+....     ...+.+++++.+++|+.++.++++++...    +.+++|++||.+.+..                
T Consensus        65 Vih~A~~~~~-----~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  135 (319)
T 4b8w_A           65 VIHLAAMVGG-----LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCIFPDKTTYPIDETMIHNGPP  135 (319)
T ss_dssp             EEECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSCSSCCSSBCGGGGGBSCC
T ss_pred             EEECceeccc-----ccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhhcCCCCCCCccccccccCCC
Confidence            9999996431     01122345788999999999999998773    4679999999865432                


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC----CHHHHHH----HHHhccc-c------
Q 044670          145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPAILEA----FLSEMGN-L------  209 (302)
Q Consensus       145 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~----~~~~~~~-~------  209 (302)
                      .+....|+.||.+.|.+++.++.+.   |+++++++|+.+++|.......    .+.++..    .....+. .      
T Consensus       136 ~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (319)
T 4b8w_A          136 HNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNP  212 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCC
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCe
Confidence            1222369999999999999998774   7999999999999997653211    1233444    2222111 1      


Q ss_pred             CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          210 RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 ~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ...+++++|+|++++.++..... ..|+++++.+|..+
T Consensus       213 ~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          213 RRQFIYSLDLAQLFIWVLREYNE-VEPIILSVGEEDEV  249 (319)
T ss_dssp             EECEEEHHHHHHHHHHHHHHCCC-SSCEEECCCGGGCE
T ss_pred             eEEEEeHHHHHHHHHHHHhcccc-CCceEEEecCCCce
Confidence            12468999999999999865322 35778888877663

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.90  E-value=1e-22  Score=190.54  Aligned_cols=221  Identities=13%  Similarity=0.049  Sum_probs=159.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc---CCEEEEEecCccHHHHHHH------------------HhCCCeEEEEecCC-
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN---GAKVVIADVQDNLGQALAC------------------KLGEDVCYIHCDVT-   59 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~------------------~~~~~~~~~~~Dl~-   59 (302)
                      ++|+||||||||+||++++++|+++   |++|++++|+.+.......                  ....++.++.+|++ 
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~  151 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE  151 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence            6899999999999999999999999   9999999998765432211                  12358999999998 


Q ss_pred             -----CHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEE
Q 044670           60 -----SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCIL  134 (302)
Q Consensus        60 -----~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv  134 (302)
                           |.++++++++       ++|+||||||....          +.+++.+++|+.++.++++++..    .+.+++|
T Consensus       152 ~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~~~V  210 (478)
T 4dqv_A          152 PDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIALT----TKLKPFT  210 (478)
T ss_dssp             GGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHTS----SSCCCEE
T ss_pred             cccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHHh----CCCCeEE
Confidence                 6667666665       68999999997532          23457889999999999888765    3456899


Q ss_pred             EEcCcccccCCCC----------------------ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC
Q 044670          135 FTASACTEIAGIG----------------------SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN  192 (302)
Q Consensus       135 ~~sS~~~~~~~~~----------------------~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~  192 (302)
                      ++||.+.+.....                      ...|+.||.+.|.+++.++.+.   |+++++++||+|+++.....
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~~~~g  287 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADTSYAG  287 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCSSSSS
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCCccCC
Confidence            9999765432111                      1339999999999999998763   89999999999999854221


Q ss_pred             -CCCHHHHHHHHHh-----ccc-c-------------CCCCCCHHHHHHHHHHhccCC--CCCccccEEeeCCCcc
Q 044670          193 -SINPAILEAFLSE-----MGN-L-------------RGQVLNAEGIANAALYLATDE--ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       193 -~~~~~~~~~~~~~-----~~~-~-------------~~~~~~~~dva~~~~~l~s~~--~~~~~G~~~~~~gG~~  246 (302)
                       .....++..+...     ..+ .             ...+++++|+|++++.++...  .....|++|++.++..
T Consensus       288 ~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          288 QLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             CCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             cCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence             1122222222211     111 0             124589999999999887531  1223588999988765

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=1.3e-24  Score=181.82  Aligned_cols=198  Identities=13%  Similarity=0.030  Sum_probs=149.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      .+|+++||||+|+||++++++|+++|+  +|++++|++..       ...++.++.+|++|++++.+++         +|
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------~~~~~~~~~~D~~~~~~~~~~~---------~d   67 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRLDNPVGPLAELLPQLDGS---------ID   67 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTEECCBSCHHHHGGGCCSC---------CS
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------cCCCceEEeccccCHHHHHHhh---------hc
Confidence            368999999999999999999999998  99999998765       1246788899999887765543         89


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||....        ..+++++.+++|+.++.++++++.+    .+.+++|++||......  +...|+.+|.+++
T Consensus        68 ~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e  133 (215)
T 2a35_A           68 TAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADAK--SSIFYNRVKGELE  133 (215)
T ss_dssp             EEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             EEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cCCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence            99999996421        1345788999999999999999877    34678999999876543  4568999999999


Q ss_pred             HHHHHHHHHHCCCCcE-EEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc---CCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          160 ALVKILAAELRQYGLR-VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL---RGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~-v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      .+++.       .|++ +++++||+++++...... ....    .....+.   ...+++++|+|++++.++..+.    
T Consensus       134 ~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~-~~~~----~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----  197 (215)
T 2a35_A          134 QALQE-------QGWPQLTIARPSLLFGPREEFRL-AEIL----AAPIARILPGKYHGIEACDLARALWRLALEEG----  197 (215)
T ss_dssp             HHHTT-------SCCSEEEEEECCSEESTTSCEEG-GGGT----TCCCC----CHHHHHHHHHHHHHHHHHHTCCC----
T ss_pred             HHHHH-------cCCCeEEEEeCceeeCCCCcchH-HHHH----HHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----
Confidence            88765       3898 999999999998653110 0000    0000000   1236789999999999996543    


Q ss_pred             ccEEeeCCCc
Q 044670          236 GLNLVVDGGF  245 (302)
Q Consensus       236 G~~~~~~gG~  245 (302)
                      ++.+++.++.
T Consensus       198 ~~~~~i~~~~  207 (215)
T 2a35_A          198 KGVRFVESDE  207 (215)
T ss_dssp             SEEEEEEHHH
T ss_pred             CCceEEcHHH
Confidence            6677776654

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.89  E-value=1.2e-23  Score=184.66  Aligned_cols=204  Identities=12%  Similarity=0.038  Sum_probs=151.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +++|||||||+||++++++|+ +|++|++++|+..              ++.+|++|++++.++++..     ++|+|||
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~--------------~~~~D~~d~~~~~~~~~~~-----~~d~vih   60 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK--------------EFCGDFSNPKGVAETVRKL-----RPDVIVN   60 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS--------------SSCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc--------------cccccCCCHHHHHHHHHhc-----CCCEEEE
Confidence            379999999999999999999 8999999998762              3578999999988888754     6999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~  152 (302)
                      +||....      ....+++++.+++|+.++.++++++.+    .+ .++|++||.+.+.+..           +...|+
T Consensus        61 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~  129 (299)
T 1n2s_A           61 AAAHTAV------DKAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVYG  129 (299)
T ss_dssp             CCCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHH
T ss_pred             CcccCCH------hhhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHHH
Confidence            9996431      011235678899999999999998865    23 3899999986654322           256899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-c----CCCCCCHHHHHHHHHHhc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-L----RGQVLNAEGIANAALYLA  227 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~dva~~~~~l~  227 (302)
                      .||.+.|.+++.++       .++++++|+++++|.....  .+.+........+. .    ...+++++|+|++++.++
T Consensus       130 ~sK~~~E~~~~~~~-------~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~  200 (299)
T 1n2s_A          130 KTKLAGEKALQDNC-------PKHLIFRTSWVYAGKGNNF--AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAI  200 (299)
T ss_dssp             HHHHHHHHHHHHHC-------SSEEEEEECSEECSSSCCH--HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC-------CCeEEEeeeeecCCCcCcH--HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHH
Confidence            99999999998765       2789999999999875311  22333333322111 1    134678999999999998


Q ss_pred             cCCCCCc-cccEEeeCCCccc
Q 044670          228 TDEASDV-TGLNLVVDGGFSV  247 (302)
Q Consensus       228 s~~~~~~-~G~~~~~~gG~~~  247 (302)
                      ....... .|+++++.+|..+
T Consensus       201 ~~~~~~~~~~~~~~i~~~~~~  221 (299)
T 1n2s_A          201 RVALNKPEVAGLYHLVAGGTT  221 (299)
T ss_dssp             HHHHHCGGGCEEEECCCBSCE
T ss_pred             HHhccccccCceEEEeCCCCC
Confidence            6532122 4789999988653

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.89  E-value=2.4e-23  Score=181.85  Aligned_cols=196  Identities=15%  Similarity=0.086  Sum_probs=149.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ++|||||||+||++++++|+++|++|++++|.                  .+|++|.+++.++++..     ++|+|||+
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------~~D~~d~~~~~~~~~~~-----~~d~vi~~   63 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------LLDITNISQVQQVVQEI-----RPHIIIHC   63 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------TSCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------ccCCCCHHHHHHHHHhc-----CCCEEEEC
Confidence            89999999999999999999999999999982                  37999999998888865     79999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYTV  153 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  153 (302)
                      |+....      ....+++++.+++|+.++.++++++.+.    + .++|++||...+.+.           .+...|+.
T Consensus        64 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  132 (287)
T 3sc6_A           64 AAYTKV------DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGA  132 (287)
T ss_dssp             CCCCCH------HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHH
T ss_pred             CcccCh------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHH
Confidence            997532      1112457889999999999999999874    2 379999998665332           23568999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHhcc
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s  228 (302)
                      +|.+.|.+++.++.       ++++++|+.+++|.....  .+.+........+.     ....+++++|+|+++++++.
T Consensus       133 sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  203 (287)
T 3sc6_A          133 SKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNF--VKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIH  203 (287)
T ss_dssp             HHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH--HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcH--HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHh
Confidence            99999999987752       468999999999864321  12222222211111     11347789999999999997


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      .+.    ++++++.+|..+
T Consensus       204 ~~~----~~~~~i~~~~~~  218 (287)
T 3sc6_A          204 TSL----YGTYHVSNTGSC  218 (287)
T ss_dssp             SCC----CEEEECCCBSCE
T ss_pred             CCC----CCeEEEcCCCcc
Confidence            643    568999888753

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.89  E-value=6.9e-23  Score=178.80  Aligned_cols=197  Identities=11%  Similarity=-0.000  Sum_probs=150.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      |++|||||||+||++++++|+++  |++|++++|+.+....+..   ..++++.+|++|++++.++++       ++|+|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~---~~~~~~~~D~~d~~~l~~~~~-------~~d~v   70 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD---QGVEVRHGDYNQPESLQKAFA-------GVSKL   70 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh---cCCeEEEeccCCHHHHHHHHh-------cCCEE
Confidence            57999999999999999999999  9999999998776554432   467889999999999887776       68999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      ||+|+...         . +      ++|+.++.++++++..    .+.+++|++||.....   ....|+.+|.+.|.+
T Consensus        71 i~~a~~~~---------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           71 LFISGPHY---------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAEE---SIIPLAHVHLATEYA  127 (287)
T ss_dssp             EECCCCCS---------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGGG---CCSTHHHHHHHHHHH
T ss_pred             EEcCCCCc---------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCCC---CCCchHHHHHHHHHH
Confidence            99998421         1 1      5789999998888866    3567999999987642   234799999999988


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH-hcc-----ccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS-EMG-----NLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++.       .|+++++++||++.++....      .+..... ...     .....+++++|+|++++.++..+.  ..
T Consensus       128 ~~~-------~~~~~~ilrp~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~  192 (287)
T 2jl1_A          128 IRT-------TNIPYTFLRNALYTDFFVNE------GLRASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HE  192 (287)
T ss_dssp             HHH-------TTCCEEEEEECCBHHHHSSG------GGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CT
T ss_pred             HHH-------cCCCeEEEECCEeccccchh------hHHHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CC
Confidence            753       58999999999988765211      1111111 111     111458899999999999986543  36


Q ss_pred             ccEEeeCCCcccC
Q 044670          236 GLNLVVDGGFSVA  248 (302)
Q Consensus       236 G~~~~~~gG~~~~  248 (302)
                      |++++++++..++
T Consensus       193 g~~~~i~~~~~~s  205 (287)
T 2jl1_A          193 NKTYNLVSNQPWT  205 (287)
T ss_dssp             TEEEEECCSSCBC
T ss_pred             CcEEEecCCCcCC
Confidence            8999999986654

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.89  E-value=5.1e-22  Score=176.61  Aligned_cols=220  Identities=16%  Similarity=0.096  Sum_probs=163.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHH-HcCCEEEEEecCccH---------------HHHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFH-ENGAKVVIADVQDNL---------------GQALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~---------------~~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      .+|++||||||+|||++++.+|+ +.|+.|+++.+..+.               ..+..+..+.....+.||++|+++++
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            47999999999999999999999 789999998875431               12334455788999999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCCCC-----------CCC---------------------CCCCCHHHHHHHHHHHhh-
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVDRG-----------FAS---------------------VLDTPKSDLDRVLAVNTT-  112 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~~~-----------~~~---------------------~~~~~~~~~~~~~~~n~~-  112 (302)
                      ++++++.+++|++|+||||++.....           .+|                     +...+.++++.+..+.-. 
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s  208 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGE  208 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred             HHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhh
Confidence            99999999999999999999975210           011                     123456666666555443 


Q ss_pred             --HHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC--ChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCc
Q 044670          113 --GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG--SPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGI  188 (302)
Q Consensus       113 --~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~--~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  188 (302)
                        +.+...+...+.|.  .+++++..|+.++....|.  ...|+.+|++++..++.|+.++++  ++++++.||.+.|..
T Consensus       209 ~~s~w~~al~~a~lla--~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~~a~vT~A  284 (401)
T 4ggo_A          209 DWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS--IRAFVSVNKGLVTRA  284 (401)
T ss_dssp             HHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCCCCCTT
T ss_pred             HHHHHHHHHHhhhccc--CCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEcCccccch
Confidence              44444555555553  4689999999888665553  347999999999999999999975  899999999999987


Q ss_pred             ccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          189 SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ...-...+-.+...++-+    +..++-|.+.+.+..|..+
T Consensus       285 ssaIP~~ply~~~l~kvm----k~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          285 SAVIPVIPLYLASLFKVM----KEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             GGGSSSHHHHHHHHHHHH----HHHTCCCCHHHHHHHHHHH
T ss_pred             hhcCCCchHHHHHHHHHH----HhcCCCCchHHHHHHHHHH
Confidence            766544443333333322    2345667788888888754

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.89  E-value=5.2e-24  Score=188.60  Aligned_cols=211  Identities=15%  Similarity=0.100  Sum_probs=150.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH----HHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL----GQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .+++||||||||+||++++++|+++|++|++++|+...    ...+.... ...+.++.+|++                 
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----------------   68 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-----------------   68 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-----------------
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-----------------
Confidence            37899999999999999999999999999999997651    11111000 123344445544                 


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------  145 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------  145 (302)
                      ++|+|||+|+.....  ..    .++....++ |+.++.++++++...    +.+++|++||...+...           
T Consensus        69 ~~d~vi~~a~~~~~~--~~----~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~~~  137 (321)
T 3vps_A           69 DVRLVYHLASHKSVP--RS----FKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDSPL  137 (321)
T ss_dssp             TEEEEEECCCCCCHH--HH----TTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             cCCEEEECCccCChH--HH----HhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCCCC
Confidence            689999999965420  00    112234566 999999999998874    35799999998765432           


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCc-EEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-------cCCCCCCHH
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGL-RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-------LRGQVLNAE  217 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~  217 (302)
                      .+...|+.||.+.|.+++.++.+   +|+ ++++++|+.+++|........+.+........+.       ....+++++
T Consensus       138 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          138 SPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence            23578999999999999999865   589 9999999999999866533234444444443221       113467999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |+|++++.++..+..   | ++++.+|..+
T Consensus       215 Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          215 DVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             HHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             HHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            999999999976543   7 9999988754

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.89  E-value=2.6e-22  Score=196.07  Aligned_cols=230  Identities=15%  Similarity=0.116  Sum_probs=161.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH----HHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+||||||+|+||++++++|+++|++|++++|+....    ..+......++.++.+|++|++++++++++.     
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-----   83 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----   83 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-----
Confidence            3689999999999999999999999999999999875431    2222122456788999999999988877643     


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC------------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA------------  144 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~------------  144 (302)
                      ++|+|||+||....      ....+..++.+++|+.++.++++++...    +.++||++||.+.+..            
T Consensus        84 ~~D~Vih~A~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~iV~~SS~~vyg~~~~~~~~~~~~E  153 (699)
T 1z45_A           84 KIDSVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIPE  153 (699)
T ss_dssp             CCCEEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBCT
T ss_pred             CCCEEEECCcccCc------CccccCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECcHHHhCCCccccccCCccc
Confidence            69999999996431      0112334678999999999998877663    4679999999765421            


Q ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC------CH---HHHHHHHHh---cccc
Q 044670          145 ---GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI------NP---AILEAFLSE---MGNL  209 (302)
Q Consensus       145 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~---~~~~~~~~~---~~~~  209 (302)
                         ..+...|+.||++++.+++.++.+. ..++++++++|+.++++.......      ..   ..+......   ....
T Consensus       154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          154 ECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             cCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence               1134689999999999999998775 358999999999999875321100      01   122222211   0011


Q ss_pred             ------------CCCCCCHHHHHHHHHHhccCC----CCCccccEEeeCCCcc
Q 044670          210 ------------RGQVLNAEGIANAALYLATDE----ASDVTGLNLVVDGGFS  246 (302)
Q Consensus       210 ------------~~~~~~~~dva~~~~~l~s~~----~~~~~G~~~~~~gG~~  246 (302)
                                  ...+++++|+|++++.++...    ...-.|+++++.+|..
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~  285 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG  285 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC
Confidence                        124678999999998887521    1112467899988765

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.89  E-value=1.3e-22  Score=175.69  Aligned_cols=197  Identities=14%  Similarity=0.135  Sum_probs=147.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +++||||+|+||++++++|+ +|++|++++|+.+..        ..   +.+|++|+++++++++..     ++|+||||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~--------~~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~~   64 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ--------GG---YKLDLTDFPRLEDFIIKK-----RPDVIINA   64 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT--------TC---EECCTTSHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC--------CC---ceeccCCHHHHHHHHHhc-----CCCEEEEC
Confidence            69999999999999999999 599999999987531        12   789999999998888765     69999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------CChhHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------GSPAYTVS  154 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------~~~~Y~~s  154 (302)
                      ||....      ..+.+++++.+++|+.++.++++++.+    .+ +++|++||...+.+.+          +...|+.|
T Consensus        65 a~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~s  133 (273)
T 2ggs_A           65 AAMTDV------DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLS  133 (273)
T ss_dssp             CCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHH
T ss_pred             CcccCh------hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHH
Confidence            996431      123467889999999999999999976    23 4999999987765433          35789999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc----CCCCCCHHHHHHHHHHhccCC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL----RGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++++.+++.         +....++|+.++++    ......+...........    ..++++++|+|++++++++..
T Consensus       134 K~~~e~~~~~---------~~~~~iR~~~v~G~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          134 KLLGETFALQ---------DDSLIIRTSGIFRN----KGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHHCC---------TTCEEEEECCCBSS----SSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhC---------CCeEEEeccccccc----cHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence            9999999877         34577888888852    111112222222211100    246899999999999999754


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      .   +| ++++++ ..+
T Consensus       201 ~---~g-~~~i~~-~~~  212 (273)
T 2ggs_A          201 K---TG-IIHVAG-ERI  212 (273)
T ss_dssp             C---CE-EEECCC-CCE
T ss_pred             c---CC-eEEECC-Ccc
Confidence            2   45 888888 553

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.88  E-value=1.2e-22  Score=218.96  Aligned_cols=175  Identities=17%  Similarity=0.160  Sum_probs=137.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHH---HHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLG---QALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~---~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .+|++|||||++|||+++++.|+++|++ |++++|+..+.   .+..++   .+.++.++.+|++|+++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            5799999999999999999999999997 78888886432   222222   35678899999999999999999987 4


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++|+||||||+...  .++.+.+.++|++++++|+.|++++.+.+.+.|.+  .++||++||.++..+.++...|++|
T Consensus      1962 ~g~id~lVnnAgv~~~--~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aa 2037 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD--AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFA 2037 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHH
T ss_pred             cCCCcEEEECCCcCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHH
Confidence            7899999999998764  57888999999999999999999999999998854  4899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCccc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLV  185 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~  185 (302)
                      |++++.|++..+.+    |++..++..|.+.
T Consensus      2038 Kaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2038 NSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            99999999987755    7888888876653

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.88  E-value=5.2e-22  Score=187.13  Aligned_cols=220  Identities=16%  Similarity=0.094  Sum_probs=160.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH---HH------------HHHhCCCeEEEEecCCCHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ---AL------------ACKLGEDVCYIHCDVTSEDEITNL   67 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~------------~~~~~~~~~~~~~Dl~~~~~v~~~   67 (302)
                      .++||||||||+||++++++|.++|++|++++|+.+...   .+            ......++.++.+|+++++++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            478999999999999999999999999999999887322   11            1122468999999999988766  


Q ss_pred             HHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc--ccC-
Q 044670           68 VDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT--EIA-  144 (302)
Q Consensus        68 ~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~--~~~-  144 (302)
                            ...++|+|||+|+....         ..+++..+++|+.++.++++++.+     +.+++|++||.+.  ... 
T Consensus       228 ------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~  287 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDI  287 (508)
T ss_dssp             ------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECT
T ss_pred             ------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCcc
Confidence                  33489999999996431         235678899999999999998876     3578999999776  100 


Q ss_pred             ---------------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhc
Q 044670          145 ---------------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEM  206 (302)
Q Consensus       145 ---------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~  206 (302)
                                     ..+...|+.||.+.|.+++.++.    .|+++++++||.|+++.......   ....+..+....
T Consensus       288 ~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~  363 (508)
T 4f6l_B          288 DTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  363 (508)
T ss_dssp             TCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHH
T ss_pred             CCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHH
Confidence                           11457899999999999998763    59999999999999987654311   111222222211


Q ss_pred             c----cc------CCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC
Q 044670          207 G----NL------RGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       207 ~----~~------~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      .    .+      ...+++++|+|+++++++..+.   .|++|++.++..+...+
T Consensus       364 ~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~s~~e  415 (508)
T 4f6l_B          364 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKMPVKS  415 (508)
T ss_dssp             TTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEEEHHH
T ss_pred             HHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCCCHHH
Confidence            1    11      1237789999999999997544   68999999987765444

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.87  E-value=2.3e-21  Score=168.89  Aligned_cols=193  Identities=12%  Similarity=0.048  Sum_probs=142.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++||||||+||++++++|+++  |++|++++|+++....+..   ..+.++.+|++|++++.++++       .+|+||
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~-------~~d~vi   70 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA---QGITVRQADYGDEAALTSALQ-------GVEKLL   70 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH---TTCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc---CCCeEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            4899999999999999999999  9999999998776554432   357889999999999887776       689999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALV  162 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~  162 (302)
                      |+|+...                  ..|+.++.++++++...    +.+++|++||....   .....|+.+|.++|.++
T Consensus        71 ~~a~~~~------------------~~~~~~~~~l~~a~~~~----~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           71 LISSSEV------------------GQRAPQHRNVINAAKAA----GVKFIAYTSLLHAD---TSPLGLADEHIETEKML  125 (286)
T ss_dssp             ECC--------------------------CHHHHHHHHHHHH----TCCEEEEEEETTTT---TCCSTTHHHHHHHHHHH
T ss_pred             EeCCCCc------------------hHHHHHHHHHHHHHHHc----CCCEEEEECCCCCC---CCcchhHHHHHHHHHHH
Confidence            9998410                  13677788877777663    46799999998765   22357999999999888


Q ss_pred             HHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH-h-cc----ccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS-E-MG----NLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       163 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~-~~----~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +.       .|+++++++||++.++...       .+..... . ..    .....+++++|+|++++++++.+.  .+|
T Consensus       126 ~~-------~~~~~~ilrp~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  189 (286)
T 2zcu_A          126 AD-------SGIVYTLLRNGWYSENYLA-------SAPAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEG  189 (286)
T ss_dssp             HH-------HCSEEEEEEECCBHHHHHT-------THHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTT
T ss_pred             HH-------cCCCeEEEeChHHhhhhHH-------HhHHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCC
Confidence            64       3899999999988765421       1111111 1 11    111457899999999999987543  379


Q ss_pred             cEEeeCCCcccC
Q 044670          237 LNLVVDGGFSVA  248 (302)
Q Consensus       237 ~~~~~~gG~~~~  248 (302)
                      ++++++|+..++
T Consensus       190 ~~~~i~~~~~~s  201 (286)
T 2zcu_A          190 KVYELAGDSAWT  201 (286)
T ss_dssp             CEEEECCSSCBC
T ss_pred             ceEEEeCCCcCC
Confidence            999999986543

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.84  E-value=6.1e-21  Score=167.62  Aligned_cols=206  Identities=13%  Similarity=0.076  Sum_probs=142.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHH-HHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQA-LACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|+++||||||+||++++++|+++| ++|++++|+.+.... ...  ...++++.+|++|++++.++++       .+|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~--~~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR--LQGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH--HTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH--HCCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            5899999999999999999999999 999999998765421 111  1457889999999999888776       6899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--CCCChhHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGSPAYTVSKYGI  158 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~  158 (302)
                      |||+++....       .       ..+.|+.++.++++++..    .+.++||++||......  ......|+.+|.++
T Consensus        76 vi~~a~~~~~-------~-------~~~~~~~~~~~~~~aa~~----~gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~  137 (299)
T 2wm3_A           76 TFIVTNYWES-------C-------SQEQEVKQGKLLADLARR----LGLHYVVYSGLENIKKLTAGRLAAAHFDGKGEV  137 (299)
T ss_dssp             EEECCCHHHH-------T-------CHHHHHHHHHHHHHHHHH----HTCSEEEECCCCCHHHHTTTSCCCHHHHHHHHH
T ss_pred             EEEeCCCCcc-------c-------cchHHHHHHHHHHHHHHH----cCCCEEEEEcCccccccCCCcccCchhhHHHHH
Confidence            9999984211       0       123456666666666554    45689999666543321  12246799999999


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH-H-HHhcc--ccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA-F-LSEMG--NLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~-~~~~~--~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +.+++.       .|+++++++||+++++....... ...... . .-..+  .....+++++|+|++++.++..+. ..
T Consensus       138 e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~  208 (299)
T 2wm3_A          138 EEYFRD-------IGVPMTSVRLPCYFENLLSHFLP-QKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KY  208 (299)
T ss_dssp             HHHHHH-------HTCCEEEEECCEEGGGGGTTTCC-EECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HH
T ss_pred             HHHHHH-------CCCCEEEEeecHHhhhchhhcCC-cccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hh
Confidence            988764       37999999999999986532110 000000 0 00000  001246799999999999986532 13


Q ss_pred             cccEEeeCCC
Q 044670          235 TGLNLVVDGG  244 (302)
Q Consensus       235 ~G~~~~~~gG  244 (302)
                      .|++++++|.
T Consensus       209 ~g~~~~~~g~  218 (299)
T 2wm3_A          209 VGQNIGLSTC  218 (299)
T ss_dssp             TTCEEECCSE
T ss_pred             CCeEEEeeec
Confidence            6889998864

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.83  E-value=2.4e-20  Score=162.66  Aligned_cols=196  Identities=8%  Similarity=-0.075  Sum_probs=139.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++|||||| |+||++++++|+++|++|++++|+.+....+..   ..++++.+|++|.+            ..++|+|||
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~D~~d~~------------~~~~d~vi~   69 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA---SGAEPLLWPGEEPS------------LDGVTHLLI   69 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH---TTEEEEESSSSCCC------------CTTCCEEEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh---CCCeEEEecccccc------------cCCCCEEEE
Confidence            68999998 999999999999999999999999887765543   46899999999933            347999999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~  152 (302)
                      +|+.....       .  ..          +.++++++...  ..+.+++|++||.+.+....           +...|+
T Consensus        70 ~a~~~~~~-------~--~~----------~~~l~~a~~~~--~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           70 STAPDSGG-------D--PV----------LAALGDQIAAR--AAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             CCCCBTTB-------C--HH----------HHHHHHHHHHT--GGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             CCCccccc-------c--HH----------HHHHHHHHHhh--cCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            99964321       1  11          12333333331  13467999999976543221           345799


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc--ccCCCCCCHHHHHHHHHHhccCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .+|.+.|.+++.+      .|+++++++|++++++........   .........  .....+++++|+|++++.++...
T Consensus       129 ~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~  199 (286)
T 3ius_A          129 RWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKL---GKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARP  199 (286)
T ss_dssp             HHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTS---SSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHH---hcCCccccCCCCcccceEEHHHHHHHHHHHHhCC
Confidence            9999999988877      589999999999999875432110   000000000  01145789999999999999765


Q ss_pred             CCCccccEEeeCCCcccC
Q 044670          231 ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~~  248 (302)
                      .   .|+++++.+|..++
T Consensus       200 ~---~g~~~~i~~~~~~s  214 (286)
T 3ius_A          200 D---PGAVYNVCDDEPVP  214 (286)
T ss_dssp             C---TTCEEEECCSCCBC
T ss_pred             C---CCCEEEEeCCCCcc
Confidence            4   58899999887643

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.83  E-value=9.7e-21  Score=171.30  Aligned_cols=197  Identities=16%  Similarity=0.045  Sum_probs=147.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ++||||||||+||++++++|+++|+ +|+..+|+                      +|+++++++++       ++|+||
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------~d~~~l~~~~~-------~~d~Vi   51 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------TKEEELESALL-------KADFIV   51 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------CCHHHHHHHHH-------HCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------CCHHHHHHHhc-------cCCEEE
Confidence            3799999999999999999999998 66665543                      78888888777       589999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcCcccccCCCCChhHHHHHHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIAL  161 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~  161 (302)
                      |+||....          ++++..+++|+.++.++++++.+    .+.. ++|++||.....    ...|+.||.+.|.+
T Consensus        52 h~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~  113 (369)
T 3st7_A           52 HLAGVNRP----------EHDKEFSLGNVSYLDHVLDILTR----NTKKPAILLSSSIQATQ----DNPYGESKLQGEQL  113 (369)
T ss_dssp             ECCCSBCT----------TCSTTCSSSCCBHHHHHHHHHTT----CSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHH
T ss_pred             ECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEeCchhhcC----CCCchHHHHHHHHH
Confidence            99996542          12345678899999998888755    3444 899999987654    57899999999999


Q ss_pred             HHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhccccC------CCCCCHHHHHHHHHHhccCCCCC
Q 044670          162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNLR------GQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       162 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ++.++++.   |+++++++|++++++.......  .+.+........+...      ..+++++|+|++++.++..+.. 
T Consensus       114 ~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-  189 (369)
T 3st7_A          114 LREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-  189 (369)
T ss_dssp             HHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-
T ss_pred             HHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-
Confidence            99999873   7899999999999987654321  1233333333222111      2367899999999999975432 


Q ss_pred             ccccEEeeCCCcccCCCC
Q 044670          234 VTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~~~  251 (302)
                      ..|+++++.+|..++..+
T Consensus       190 ~~~~~~~i~~~~~~s~~e  207 (369)
T 3st7_A          190 IENGVPTVPNVFKVTLGE  207 (369)
T ss_dssp             EETTEECCSCCEEEEHHH
T ss_pred             cCCceEEeCCCCceeHHH
Confidence            238899998887655443

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.83  E-value=2.1e-20  Score=168.13  Aligned_cols=204  Identities=13%  Similarity=0.043  Sum_probs=140.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH--HHHHHhCCCeEEEEec-CCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ--ALACKLGEDVCYIHCD-VTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~D-l~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++|+++||||||+||++++++|+++|++|++++|+.+...  .+..  ...++++.+| ++|++++.++++       .+
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~--~~~v~~v~~D~l~d~~~l~~~~~-------~~   74 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA--IPNVTLFQGPLLNNVPLMDTLFE-------GA   74 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT--STTEEEEESCCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh--cCCcEEEECCccCCHHHHHHHHh-------cC
Confidence            4789999999999999999999999999999999877542  2211  1368889999 999999888776       68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcc-cccCCCCChhHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASAC-TEIAGIGSPAYTVSKY  156 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~-~~~~~~~~~~Y~~sK~  156 (302)
                      |+||||++....                 +.|..+ .++++++..    .+ .+++|++||.. ...+......|+.||+
T Consensus        75 d~Vi~~a~~~~~-----------------~~~~~~-~~l~~aa~~----~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~  132 (352)
T 1xgk_A           75 HLAFINTTSQAG-----------------DEIAIG-KDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKF  132 (352)
T ss_dssp             SEEEECCCSTTS-----------------CHHHHH-HHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHH
T ss_pred             CEEEEcCCCCCc-----------------HHHHHH-HHHHHHHHH----cCCccEEEEeCCccccccCCCCCccHHHHHH
Confidence            999999974210                 125544 555665554    34 67999999986 3444445578999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH-HHHhcc----c----cCCCCCCH-HHHHHHHHHh
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA-FLSEMG----N----LRGQVLNA-EGIANAALYL  226 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~-~~~~~~----~----~~~~~~~~-~dva~~~~~l  226 (302)
                      +++.+++.       .|+++++++||++ ++....... +-+... ......    +    ....++++ +|+|++++.+
T Consensus       133 ~~E~~~~~-------~gi~~~ivrpg~~-g~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~  203 (352)
T 1xgk_A          133 TVENYVRQ-------LGLPSTFVYAGIY-NNNFTSLPY-PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQI  203 (352)
T ss_dssp             HHHHHHHT-------SSSCEEEEEECEE-GGGCBSSSC-SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------cCCCEEEEeccee-cCCchhccc-ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHH
Confidence            99988875       2899999999865 443321100 000000 000000    0    01236788 8999999999


Q ss_pred             ccCCCCCccccEEeeCCCc
Q 044670          227 ATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~  245 (302)
                      +..+.....|+++++.++.
T Consensus       204 l~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          204 FKDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHHCHHHHTTCEEEECSEE
T ss_pred             HhCCchhhCCeEEEEecCC
Confidence            8654223468999998754

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.83  E-value=1.2e-19  Score=163.30  Aligned_cols=215  Identities=13%  Similarity=0.050  Sum_probs=148.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC-----CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG-----AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|+||||||||+||++++++|+++|     ++|++++|+.....    ....+++++.+|++|++++.++++..    ++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~~   72 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----HEDNPINYVQCDISDPDDSQAKLSPL----TD   72 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----CCSSCCEEEECCTTSHHHHHHHHTTC----TT
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----cccCceEEEEeecCCHHHHHHHHhcC----CC
Confidence            5789999999999999999999999     99999999865432    11246789999999999887776522    23


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEE-------EEcCcccccCC-----
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCIL-------FTASACTEIAG-----  145 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv-------~~sS~~~~~~~-----  145 (302)
                      +|+|||+|+...           +++++.+++|+.++.++++++.+..  .+..++|       ++||.+.+...     
T Consensus        73 ~d~vih~a~~~~-----------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           73 VTHVFYVTWANR-----------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             CCEEEECCCCCC-----------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             CCEEEECCCCCc-----------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccCCC
Confidence            999999999542           1357889999999999999988742  1356776       67876543221     


Q ss_pred             ---------CCChhHHHHHHHHHHHHHHHHHHHCCCC-cEEEEEeCCcccCCcccCCCC--CHH-HHHHHH--Hhcccc-
Q 044670          146 ---------IGSPAYTVSKYGIIALVKILAAELRQYG-LRVNCVSPYGLVSGISSRNSI--NPA-ILEAFL--SEMGNL-  209 (302)
Q Consensus       146 ---------~~~~~Y~~sK~a~~~~~~~la~e~~~~g-i~v~~v~PG~v~t~~~~~~~~--~~~-~~~~~~--~~~~~~-  209 (302)
                               +....|    .+.|.+++.++.   .++ +++++++|+.+++|.......  .+. +.....  ...+.. 
T Consensus       140 ~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  212 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRF  212 (364)
T ss_dssp             SBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCC
T ss_pred             CCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceec
Confidence                     113356    235566655552   345 999999999999987653211  111 122221  221111 


Q ss_pred             CC---------CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          210 RG---------QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 ~~---------~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      .+         .+.+++|+|++++.++..+.  ..|+++++.++..+
T Consensus       213 ~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~--~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          213 TGCKAAWDGYSDCSDADLIAEHHIWAAVDPY--AKNEAFNVSNGDVF  257 (364)
T ss_dssp             CSCHHHHHSCBCCEEHHHHHHHHHHHHHCGG--GTTEEEEECCSCCB
T ss_pred             CCCcccccccCCCCcHHHHHHHHHHHHhCCC--CCCceEEecCCCcC
Confidence            11         24456999999998886432  36889999888653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.83  E-value=1.1e-19  Score=158.82  Aligned_cols=195  Identities=12%  Similarity=0.092  Sum_probs=136.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +||||||||+||++++++|+++ |++|++++|+.++...+   ....++++.+|++|++++.++++       ++|+|||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~---~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi~   71 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD---WRGKVSVRQLDYFNQESMVEAFK-------GMDTVVF   71 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG---GBTTBEEEECCTTCHHHHHHHTT-------TCSEEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh---hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEEE
Confidence            6999999999999999999998 99999999988764432   13578999999999999888776       7899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVK  163 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  163 (302)
                      +|+....         .       ..|+.++.++++++..    .+.++||++||.+.....+    |..++...     
T Consensus        72 ~a~~~~~---------~-------~~~~~~~~~l~~aa~~----~gv~~iv~~Ss~~~~~~~~----~~~~~~~~-----  122 (289)
T 3e48_A           72 IPSIIHP---------S-------FKRIPEVENLVYAAKQ----SGVAHIIFIGYYADQHNNP----FHMSPYFG-----  122 (289)
T ss_dssp             CCCCCCS---------H-------HHHHHHHHHHHHHHHH----TTCCEEEEEEESCCSTTCC----STTHHHHH-----
T ss_pred             eCCCCcc---------c-------hhhHHHHHHHHHHHHH----cCCCEEEEEcccCCCCCCC----CccchhHH-----
Confidence            9985431         1       1256666666666655    5678999999975433222    33333211     


Q ss_pred             HHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc--ccCCC----CCCHHHHHHHHHHhccCCCCCcccc
Q 044670          164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLRGQ----VLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       164 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      .+...+...|+++++++||+++++..       ...........  .+.+.    +++++|+|++++.+++.+..  .|+
T Consensus       123 ~~e~~~~~~g~~~~ilrp~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~--~g~  193 (289)
T 3e48_A          123 YASRLLSTSGIDYTYVRMAMYMDPLK-------PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDT--WGK  193 (289)
T ss_dssp             HHHHHHHHHCCEEEEEEECEESTTHH-------HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGG--TTC
T ss_pred             HHHHHHHHcCCCEEEEeccccccccH-------HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCc--CCc
Confidence            11222233589999999999998743       12222222211  11122    78999999999999976543  289


Q ss_pred             EEeeCCCcccC
Q 044670          238 NLVVDGGFSVA  248 (302)
Q Consensus       238 ~~~~~gG~~~~  248 (302)
                      +++++ |..++
T Consensus       194 ~~~~~-~~~~s  203 (289)
T 3e48_A          194 RYLLS-GYSYD  203 (289)
T ss_dssp             EEEEC-CEEEE
T ss_pred             eEEeC-CCcCC
Confidence            99999 77654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.82  E-value=1.6e-19  Score=161.97  Aligned_cols=207  Identities=11%  Similarity=0.038  Sum_probs=141.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc----cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+.++||||||||+||++++++|+++|++|++++|+.    .+...+.......+.++.+|++|.+++.+++++.     
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            3467899999999999999999999999999999987    2333222222357899999999999988887653     


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccccc----CCCCChhHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI----AGIGSPAYT  152 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~----~~~~~~~Y~  152 (302)
                      ++|+|||+|+.                     .|+.++.++++++...-   ...++|+ |+.+...    +..+...|+
T Consensus        83 ~~d~Vi~~a~~---------------------~n~~~~~~l~~aa~~~g---~v~~~v~-S~~g~~~~e~~~~~p~~~y~  137 (346)
T 3i6i_A           83 EIDIVVSTVGG---------------------ESILDQIALVKAMKAVG---TIKRFLP-SEFGHDVNRADPVEPGLNMY  137 (346)
T ss_dssp             TCCEEEECCCG---------------------GGGGGHHHHHHHHHHHC---CCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred             CCCEEEECCch---------------------hhHHHHHHHHHHHHHcC---CceEEee-cccCCCCCccCcCCCcchHH
Confidence            69999999984                     28888888888887741   1567775 4433221    123457899


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-----ccCCCCCCHHHHHHHHHHhc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-----NLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~  227 (302)
                      .+|.+++.+.+.       .|+++++++||++.+............. .......     .....+++++|+|++++.++
T Consensus       138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~-~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l  209 (346)
T 3i6i_A          138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVL-PPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTV  209 (346)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CC-CCSSCEEEETTSCCCEEEECHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH-------cCCCEEEEEecccccccCcccccccccc-CCCceEEEccCCCceEEecCHHHHHHHHHHHH
Confidence            999998887764       4899999999999886543221100000 0000000     01134789999999999999


Q ss_pred             cCCCCCccccEEeeCC-Cccc
Q 044670          228 TDEASDVTGLNLVVDG-GFSV  247 (302)
Q Consensus       228 s~~~~~~~G~~~~~~g-G~~~  247 (302)
                      ..+.  ..|+.+++.| |..+
T Consensus       210 ~~~~--~~~~~~~i~g~~~~~  228 (346)
T 3i6i_A          210 DDVR--TLNKSVHFRPSCNCL  228 (346)
T ss_dssp             TCGG--GTTEEEECCCGGGEE
T ss_pred             hCcc--ccCeEEEEeCCCCCC
Confidence            7643  2367777764 4443

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.80  E-value=4e-19  Score=156.39  Aligned_cols=199  Identities=10%  Similarity=0.065  Sum_probs=132.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-------cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-------NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++++|+||||||+||++++++|+++|++|++++|+.       ++.+.+.......++++.+|++|++++.++++     
T Consensus         1 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CCcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHh-----
Confidence            367899999999999999999999999999999986       33333221112467899999999999888776     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCccccc-----CCCCC
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEI-----AGIGS  148 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~-----~~~~~  148 (302)
                        .+|+|||+|+...                     +.++.++++++..    .+ .+++|. |+.+...     ..+..
T Consensus        76 --~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~  127 (307)
T 2gas_A           76 --QVDIVICAAGRLL---------------------IEDQVKIIKAIKE----AGNVKKFFP-SEFGLDVDRHDAVEPVR  127 (307)
T ss_dssp             --TCSEEEECSSSSC---------------------GGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCCTTHH
T ss_pred             --CCCEEEECCcccc---------------------cccHHHHHHHHHh----cCCceEEee-cccccCcccccCCCcch
Confidence              6999999998521                     3445566666554    34 567873 4332111     12224


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH-HH-HHHHHHhc--cccCCCCCCHHHHHHHHH
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP-AI-LEAFLSEM--GNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~~dva~~~~  224 (302)
                      ..| .+|.+++.+++.       .|+++++++||++.++......... .. ........  ......+++++|+|++++
T Consensus       128 ~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  199 (307)
T 2gas_A          128 QVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTI  199 (307)
T ss_dssp             HHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHH
T ss_pred             hHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHH
Confidence            578 999999887753       3799999999999886543211000 00 00000000  001134679999999999


Q ss_pred             HhccCCCCCccccEEeeCC
Q 044670          225 YLATDEASDVTGLNLVVDG  243 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~g  243 (302)
                      .++.++.  ..|+.+.+.|
T Consensus       200 ~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          200 RAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHTCGG--GTTEEEECCC
T ss_pred             HHHcCcc--ccCceEEEeC
Confidence            9997543  2477777765

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.79  E-value=4.2e-19  Score=156.65  Aligned_cols=203  Identities=10%  Similarity=0.039  Sum_probs=136.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-----HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-----LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .++|+||||||+||++++++|+++|++|++++|+..     +.+.+.......++++.+|++|++++.++++       +
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            578999999999999999999999999999999853     2322222224568899999999999888776       6


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC------CCCChh
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA------GIGSPA  150 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~------~~~~~~  150 (302)
                      +|+|||+++.....                 .|+.++.++++++..    .+ .+++|+ |+.+....      .+....
T Consensus        77 ~d~vi~~a~~~~~~-----------------~~~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~  134 (313)
T 1qyd_A           77 VDVVISALAGGVLS-----------------HHILEQLKLVEAIKE----AGNIKRFLP-SEFGMDPDIMEHALQPGSIT  134 (313)
T ss_dssp             CSEEEECCCCSSSS-----------------TTTTTHHHHHHHHHH----SCCCSEEEC-SCCSSCTTSCCCCCSSTTHH
T ss_pred             CCEEEECCccccch-----------------hhHHHHHHHHHHHHh----cCCCceEEe-cCCcCCccccccCCCCCcch
Confidence            99999999964320                 267777777777765    44 678875 44332111      133567


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH--H-HHHHHHHhc--cccCCCCCCHHHHHHHHHH
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP--A-ILEAFLSEM--GNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~--~-~~~~~~~~~--~~~~~~~~~~~dva~~~~~  225 (302)
                      | .+|.+++.+.+.       .|+++++++||++.++.........  . .........  ......+++++|+|++++.
T Consensus       135 y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~  206 (313)
T 1qyd_A          135 F-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIK  206 (313)
T ss_dssp             H-HHHHHHHHHHHH-------TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHH
Confidence            8 999998887752       4799999999999875432211000  0 000000000  0001346899999999999


Q ss_pred             hccCCCCCccccEEeeCCC
Q 044670          226 LATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG  244 (302)
                      ++..+..  .|+.+++.|.
T Consensus       207 ~l~~~~~--~~~~~~~~g~  223 (313)
T 1qyd_A          207 SIDDPQT--LNKTMYIRPP  223 (313)
T ss_dssp             HTTCGGG--SSSEEECCCG
T ss_pred             HHhCccc--CCceEEEeCC
Confidence            9875432  3777777653

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.78  E-value=9.3e-19  Score=165.19  Aligned_cols=207  Identities=13%  Similarity=0.038  Sum_probs=142.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++||||||||+||++++++|+++|++|++++|+....           ..+.+|+.+.  ..+       .+.++|+||
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------~~v~~d~~~~--~~~-------~l~~~D~Vi  206 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------GKRFWDPLNP--ASD-------LLDGADVLV  206 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------TCEECCTTSC--CTT-------TTTTCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------cceeecccch--hHH-------hcCCCCEEE
Confidence            67999999999999999999999999999999987642           1256787643  112       223799999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCChhH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSPAY  151 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y  151 (302)
                      |+|+....     ...+.+..+..+++|+.++.++++++..   ..+.+++|++||.+.+..           ..+...|
T Consensus       207 h~A~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          207 HLAGEPIF-----GRFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             ECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             ECCCCccc-----cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            99996432     1345567788999999999999997554   245679999999765431           1134578


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccC------CCCCCHHHHHHHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR------GQVLNAEGIANAALY  225 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~  225 (302)
                      +.+|...+.+.+.+    ...|+++++++||++++|...   ..+.+............      ..+++++|+|++++.
T Consensus       279 ~~~~~~~E~~~~~~----~~~gi~~~ilRp~~v~Gp~~~---~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~  351 (516)
T 3oh8_A          279 AEVCRDWEHATAPA----SDAGKRVAFIRTGVALSGRGG---MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYR  351 (516)
T ss_dssp             HHHHHHHHHTTHHH----HHTTCEEEEEEECEEEBTTBS---HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH----HhCCCCEEEEEeeEEECCCCC---hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHH
Confidence            98998877665433    235899999999999998631   01111111111111111      347789999999999


Q ss_pred             hccCCCCCccccEEeeCCCccc
Q 044670          226 LATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      ++....  ..| .+++.++..+
T Consensus       352 ~l~~~~--~~g-~~ni~~~~~~  370 (516)
T 3oh8_A          352 AIVDAQ--ISG-PINAVAPNPV  370 (516)
T ss_dssp             HHHCTT--CCE-EEEESCSCCE
T ss_pred             HHhCcc--cCC-cEEEECCCCC
Confidence            986543  234 6777776553

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.74  E-value=4.1e-18  Score=149.96  Aligned_cols=197  Identities=12%  Similarity=0.094  Sum_probs=130.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc------HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN------LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .++|+||||||+||++++++|+++|++|++++|+..      +.+.+.......++++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            678999999999999999999999999999999753      2222222123568899999999999888877       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC-----CCCChh
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA-----GIGSPA  150 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~-----~~~~~~  150 (302)
                      ++|+|||+|+...                     +.++.++++++..    .+ .+++|+ |+.+....     .+....
T Consensus        77 ~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  130 (308)
T 1qyc_A           77 NVDVVISTVGSLQ---------------------IESQVNIIKAIKE----VGTVKRFFP-SEFGNDVDNVHAVEPAKSV  130 (308)
T ss_dssp             TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCSEEEC-SCCSSCTTSCCCCTTHHHH
T ss_pred             CCCEEEECCcchh---------------------hhhHHHHHHHHHh----cCCCceEee-cccccCccccccCCcchhH
Confidence            6899999998421                     3345566666655    34 577874 44332211     122356


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc-----cccCCCCCCHHHHHHHHHH
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM-----GNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~  225 (302)
                      | .+|.+++.+.+.       .|++++.++||++.++............. .....     ......+++++|+|++++.
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~  201 (308)
T 1qyc_A          131 F-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAP-PRDKVVILGDGNARVVFVKEEDIGTFTIK  201 (308)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSC-CSSEEEEETTSCCEEEEECHHHHHHHHHT
T ss_pred             H-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCC-CCCceEEecCCCceEEEecHHHHHHHHHH
Confidence            8 999998887764       37899999999987754322110000000 00000     0011346799999999999


Q ss_pred             hccCCCCCccccEEeeCC
Q 044670          226 LATDEASDVTGLNLVVDG  243 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~g  243 (302)
                      ++..+.  ..|+.+++.|
T Consensus       202 ~l~~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          202 AVDDPR--TLNKTLYLRL  217 (308)
T ss_dssp             TSSCGG--GTTEEEECCC
T ss_pred             HHhCcc--ccCeEEEEeC
Confidence            987543  2367777765

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.74  E-value=2.1e-18  Score=152.89  Aligned_cols=199  Identities=13%  Similarity=-0.015  Sum_probs=131.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc------cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD------NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .++|+||||||+||++++++|+++|++|++++|+.      ++.+.+.......++++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            46899999999999999999999999999999986      22222221112468899999999999888876       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC--C---CCChh
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA--G---IGSPA  150 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~--~---~~~~~  150 (302)
                      .+|+|||+|+...                     +.++.++++++..    .+ .+++|. |+.+....  .   +....
T Consensus        77 ~~d~vi~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~  130 (321)
T 3c1o_A           77 QVDIVISALPFPM---------------------ISSQIHIINAIKA----AGNIKRFLP-SDFGCEEDRIKPLPPFESV  130 (321)
T ss_dssp             TCSEEEECCCGGG---------------------SGGGHHHHHHHHH----HCCCCEEEC-SCCSSCGGGCCCCHHHHHH
T ss_pred             CCCEEEECCCccc---------------------hhhHHHHHHHHHH----hCCccEEec-cccccCccccccCCCcchH
Confidence            6899999998421                     3445566666655    34 567873 33321111  1   11357


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC------CCCHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN------SINPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      | .+|.+++.+++.       .+++++.++||++.++.....      ........ .. ........+++++|+|++++
T Consensus       131 y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          131 L-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIV-IY-GTGETKFVLNYEEDIAKYTI  200 (321)
T ss_dssp             H-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEE-EE-TTSCCEEEEECHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceE-Ee-cCCCcceeEeeHHHHHHHHH
Confidence            9 999999888763       378899999999876532100      00000000 00 00001134789999999999


Q ss_pred             HhccCCCCCccccEEeeCC-Ccc
Q 044670          225 YLATDEASDVTGLNLVVDG-GFS  246 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~g-G~~  246 (302)
                      .++..+..  .|+.+++.| |..
T Consensus       201 ~~l~~~~~--~g~~~~~~g~~~~  221 (321)
T 3c1o_A          201 KVACDPRC--CNRIVIYRPPKNI  221 (321)
T ss_dssp             HHHHCGGG--TTEEEECCCGGGE
T ss_pred             HHHhCccc--cCeEEEEeCCCCc
Confidence            99875432  478888876 444

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.72  E-value=8e-17  Score=142.49  Aligned_cols=194  Identities=13%  Similarity=0.050  Sum_probs=128.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      |+++||||||+||++++++|+++|++|++++|+.+ ....+.+.....++++.+|++|++++.++++       .+|+||
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            47999999999999999999999999999999875 3322221112467899999999999888876       699999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccC--C---CCChhHHHHHH
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIA--G---IGSPAYTVSKY  156 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~--~---~~~~~Y~~sK~  156 (302)
                      |+++...                     +.++.++++++..    .+ .+++|+ |+.+....  .   +....| .+|.
T Consensus        85 ~~a~~~~---------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           85 SALAFPQ---------------------ILDQFKILEAIKV----AGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             ECCCGGG---------------------STTHHHHHHHHHH----HCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             ECCchhh---------------------hHHHHHHHHHHHh----cCCCCEEEe-eccccCcccccCCCCcchhH-HHHH
Confidence            9998421                     3344555665554    34 567874 43321111  1   113468 9999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH--hcc-----ccCCCCCCHHHHHHHHHHhccC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS--EMG-----NLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +++.+.+.       .|++++.++||++.+.....      +......  ...     .....+++++|+|++++.++..
T Consensus       138 ~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~  204 (318)
T 2r6j_A          138 MIRRAIEE-------ANIPYTYVSANCFASYFINY------LLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATD  204 (318)
T ss_dssp             HHHHHHHH-------TTCCBEEEECCEEHHHHHHH------HHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHh-------cCCCeEEEEcceehhhhhhh------hccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcC
Confidence            98877753       47899999999886542110      0000000  000     0013367999999999999875


Q ss_pred             CCCCccccEEeeCC-Ccc
Q 044670          230 EASDVTGLNLVVDG-GFS  246 (302)
Q Consensus       230 ~~~~~~G~~~~~~g-G~~  246 (302)
                      +..  .|+.+++.| |..
T Consensus       205 ~~~--~~~~~~~~g~~~~  220 (318)
T 2r6j_A          205 PRA--LNRVVIYRPSTNI  220 (318)
T ss_dssp             GGG--TTEEEECCCGGGE
T ss_pred             ccc--cCeEEEecCCCCc
Confidence            432  367777765 344

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.71  E-value=5.3e-16  Score=135.99  Aligned_cols=206  Identities=17%  Similarity=0.065  Sum_probs=134.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +||||||||+||++++++|+++||+|+++.|++...         .   +..|.    .       ..+....+|.+||.
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------~---~~~~~----~-------~~~~l~~~d~vihl   58 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------R---ITWDE----L-------AASGLPSCDAAVNL   58 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------E---EEHHH----H-------HHHCCCSCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------e---eecch----h-------hHhhccCCCEEEEe
Confidence            699999999999999999999999999999976531         1   12221    0       01223479999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------CChhHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------GSPAYTV  153 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------~~~~Y~~  153 (302)
                      |+....  .+....+....+..++.|+.++.++++++...-  .+..++|++||.+.+....           +...|+.
T Consensus        59 a~~~i~--~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~--~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           59 AGENIL--NPLRRWNETFQKEVLGSRLETTQLLAKAITKAP--QPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             CCCCSS--CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCS--SCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHH
T ss_pred             ccCccc--chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhC--CCceEEEEEeeeeeecCCCCCcccccCCccccchhHH
Confidence            985322  234445677778899999999999888777642  2345577777765543221           2234555


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc------CCCCCCHHHHHHHHHHhc
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL------RGQVLNAEGIANAALYLA  227 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~l~  227 (302)
                      +|...+..     ......++++..++||.|++|....   ...+...........      ...+++++|+++++.+++
T Consensus       135 ~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~---~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~  206 (298)
T 4b4o_A          135 LVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGA---MGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL  206 (298)
T ss_dssp             HHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHH---HHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCc---hhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence            55444332     2335678999999999999985311   112221111111111      134678999999999988


Q ss_pred             cCCCCCccccEEeeCCCcccC
Q 044670          228 TDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      ..+.  ..| .+++.++..++
T Consensus       207 ~~~~--~~g-~yn~~~~~~~t  224 (298)
T 4b4o_A          207 EANH--VHG-VLNGVAPSSAT  224 (298)
T ss_dssp             HCTT--CCE-EEEESCSCCCB
T ss_pred             hCCC--CCC-eEEEECCCccC
Confidence            6543  234 88888887654

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.45  E-value=4.7e-14  Score=125.37  Aligned_cols=165  Identities=11%  Similarity=0.047  Sum_probs=115.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCcc--HHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDN--LGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~--~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      .++|+||||+|+||.+++..|+++|+       .|++.++.+.  +.......+ ...+.++ .|+.+.++..++++   
T Consensus         4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~~---   79 (327)
T 1y7t_A            4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAFK---   79 (327)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHTT---
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHhC---
Confidence            35799999999999999999999996       7999988652  222211122 1111222 46665444444443   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc--------cc-
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT--------EI-  143 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~--------~~-  143 (302)
                          ..|+|||.||....   +  ..   ...+.+++|+.++.++++++..+-  ....+++++|+...        .. 
T Consensus        80 ----~~D~Vih~Ag~~~~---~--~~---~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           80 ----DADYALLVGAAPRK---A--GM---ERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             ----TCSEEEECCCCCCC---T--TC---CHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             ----CCCEEEECCCcCCC---C--CC---CHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence                68999999997532   1  12   245689999999999999998852  12457888776541        01 


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCc
Q 044670          144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGI  188 (302)
Q Consensus       144 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~  188 (302)
                      +.++...|+.||...+.+.+.++..+   |+++..++|++|++|.
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~h  187 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGNH  187 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBCS
T ss_pred             CCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcCC
Confidence            23455679999999999999998764   6788888888888874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.37  E-value=6e-14  Score=122.44  Aligned_cols=107  Identities=19%  Similarity=0.222  Sum_probs=79.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||+++||||+||||+++++.|+++|++|++++|+.++.+++.+.+.  ..+.++.+|++++++++++++       .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------hC
Confidence            478999999999999999999999999999999999887776665442  135678899999998877766       58


Q ss_pred             cEEEEcccCCCCCCCCCCCCCH-HHHHHHHHHHhhHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPK-SDLDRVLAVNTTGGF  115 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  115 (302)
                      |+||||||..... .+..+.+. +++...+++|+.+++
T Consensus       190 DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          190 HFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             SEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             CEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence            9999999864211 11111121 334456777777655

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.14  E-value=1.7e-10  Score=96.10  Aligned_cols=78  Identities=24%  Similarity=0.238  Sum_probs=61.2

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+||+||||||                ||+||+++|++|+++|++|++++++... .     ....+  -.+|+++.++ 
T Consensus         6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-----~~~g~--~~~dv~~~~~-   76 (226)
T 1u7z_A            6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-----TPPFV--KRVDVMTALE-   76 (226)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-----CCTTE--EEEECCSHHH-
T ss_pred             CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-----cCCCC--eEEccCcHHH-
Confidence            57999999999                6999999999999999999999876521 1     11222  2467877544 


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                        +++.+.+.++++|++|||||+..
T Consensus        77 --~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           77 --MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             --HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             --HHHHHHHhcCCCCEEEECCcccC
Confidence              56777788889999999999864

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.99  E-value=2e-09  Score=80.19  Aligned_cols=74  Identities=19%  Similarity=0.181  Sum_probs=63.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|++++.+.+.   ...+.++.+|+++.+++.++++       .+|+
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~~d~   72 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN---RMGVATKQVDAKDEAGLAKALG-------GFDA   72 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH---TTTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH---hCCCcEEEecCCCHHHHHHHHc-------CCCE
Confidence            3578999999 999999999999999 99999999988776654   2456788999999988777665       7899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +||+++
T Consensus        73 vi~~~~   78 (118)
T 3ic5_A           73 VISAAP   78 (118)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999986

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.94  E-value=2e-09  Score=89.81  Aligned_cols=79  Identities=11%  Similarity=0.254  Sum_probs=59.6

Q ss_pred             CCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHH
Q 044670            2 EGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         2 ~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~   65 (302)
                      +||+||||||                ||++|.++|++|+++|++|++++|......    ..+..+..  .|+.   ++.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----~~~~~~~~--~~v~---s~~   72 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----EPHPNLSI--REIT---NTK   72 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----CCCTTEEE--EECC---SHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----cCCCCeEE--EEHh---HHH
Confidence            5899999999                888999999999999999999998754210    00123333  3444   566


Q ss_pred             HHHHHHHHHcCCccEEEEcccCCC
Q 044670           66 NLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      ++++.+.+.++++|++||||++..
T Consensus        73 em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           73 DLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             HHHHHHHHhcCCCCEEEEcCcccc
Confidence            677777788889999999999764

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.77  E-value=2.6e-08  Score=90.75  Aligned_cols=78  Identities=21%  Similarity=0.259  Sum_probs=68.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC---CEEEEEecCccHHHHHHHHhC----CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG---AKVVIADVQDNLGQALACKLG----EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G---~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++++|+|| |+||+++++.|+++|   ..|++++|+.++++.+.+.++    .++..+.+|++|.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            57999999 899999999999999   489999999999888777663    35888999999999999988865     


Q ss_pred             CccEEEEcccC
Q 044670           77 KLDIMYNNAGI   87 (302)
Q Consensus        77 ~id~lv~~Ag~   87 (302)
                      ++|+|||+++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            68999999984

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.76  E-value=1.6e-08  Score=93.24  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=64.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|+++||| +|++|++++++|++.|++|++++|+.++.+.+.+.++ .+..+.+|++|.+++.++++       .+|+
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~-~~~~~~~Dv~d~~~l~~~l~-------~~Dv   71 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA-------KHDL   71 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT-TEEEEECCTTCHHHHHHHHT-------TSSE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC-CceEEEeecCCHHHHHHHHc-------CCcE
Confidence            6789999998 7999999999999999999999999877766554332 46788899999988877765       7999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |||+++.
T Consensus        72 VIn~a~~   78 (450)
T 1ff9_A           72 VISLIPY   78 (450)
T ss_dssp             EEECCC-
T ss_pred             EEECCcc
Confidence            9999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.76  E-value=9.2e-09  Score=81.23  Aligned_cols=75  Identities=20%  Similarity=0.278  Sum_probs=62.4

Q ss_pred             CChHHHHHHHHHHHcCCEEEEEecCccHH------HHHHHHhCCCeEEEEecCCCH--HHHHHHHHHHHHHcCCccEEEE
Q 044670           12 ASGIGAAAAKLFHENGAKVVIADVQDNLG------QALACKLGEDVCYIHCDVTSE--DEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus        12 s~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++.++.++++.|+++|++|++..|++...      .+..+..+.+...+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            34578899999999999999998865432      334445567788889999999  9999999999998999 99999


Q ss_pred             cccC
Q 044670           84 NAGI   87 (302)
Q Consensus        84 ~Ag~   87 (302)
                      |||.
T Consensus       104 nAgg  107 (157)
T 3gxh_A          104 CLAN  107 (157)
T ss_dssp             CSBS
T ss_pred             CCCC
Confidence            9995

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.65  E-value=5.5e-08  Score=86.19  Aligned_cols=79  Identities=20%  Similarity=0.337  Sum_probs=61.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++||||+||||..+++.+...|++|+++++++++.+.+ +.++..   ..+|.++.+++.+.+.++..  +++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~--~~~d~v  218 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD---AAFNYKTVNSLEEALKKASP--DGYDCY  218 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS---EEEETTSCSCHHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc---EEEecCCHHHHHHHHHHHhC--CCCeEE
Confidence            579999999999999999999999999999999988777666 555543   23587774445444544432  479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       219 i~~~g  223 (333)
T 1v3u_A          219 FDNVG  223 (333)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.65  E-value=5.3e-08  Score=79.63  Aligned_cols=103  Identities=18%  Similarity=0.266  Sum_probs=71.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++||||+||||.++++.+...|++|++++|++++.+.. ..++..   ...|.++.+..+.+.+...  .+++|++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  111 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVE---YVGDSRSVDFADEILELTD--GYGVDVV  111 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCS---EEEETTCSTHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCC---EEeeCCcHHHHHHHHHHhC--CCCCeEE
Confidence            578999999999999999999999999999999987766544 334432   2347777654433333221  1369999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      |+|+|.             +.               .+.+++.+.+  .|++|++++..
T Consensus       112 i~~~g~-------------~~---------------~~~~~~~l~~--~G~~v~~g~~~  140 (198)
T 1pqw_A          112 LNSLAG-------------EA---------------IQRGVQILAP--GGRFIELGKKD  140 (198)
T ss_dssp             EECCCT-------------HH---------------HHHHHHTEEE--EEEEEECSCGG
T ss_pred             EECCch-------------HH---------------HHHHHHHhcc--CCEEEEEcCCC
Confidence            999971             01               2345566643  58999998754

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.64  E-value=8.6e-08  Score=86.27  Aligned_cols=106  Identities=23%  Similarity=0.237  Sum_probs=76.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++++++|+|+ |+||+.+++.+...|++|++++|++++.+.+.+..+..   +.+|.++.+++.+++.       ..|+
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~---~~~~~~~~~~l~~~~~-------~~Dv  232 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGR---VITLTATEANIKKSVQ-------HADL  232 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTS---EEEEECCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCce---EEEecCCHHHHHHHHh-------CCCE
Confidence            36899999999 99999999999999999999999988777665555543   4567788888776664       5899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      +|++++....   .                  .+..+.+..++.|+  +.++||++++..
T Consensus       233 Vi~~~g~~~~---~------------------~~~li~~~~l~~mk--~gg~iV~v~~~~  269 (369)
T 2eez_A          233 LIGAVLVPGA---K------------------APKLVTRDMLSLMK--EGAVIVDVAVDQ  269 (369)
T ss_dssp             EEECCC----------------------------CCSCHHHHTTSC--TTCEEEECC---
T ss_pred             EEECCCCCcc---c------------------cchhHHHHHHHhhc--CCCEEEEEecCC
Confidence            9999985320   0                  01223455667774  468899999753

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.63  E-value=2.9e-08  Score=87.99  Aligned_cols=150  Identities=9%  Similarity=0.018  Sum_probs=98.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecC----ccHHHHHHHHhCCC-eEEEEecCCCHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQ----DNLGQALACKLGED-VCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~----~~~~~~~~~~~~~~-~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      .++|+||||+|++|.+++..|+.+|.       .|++.+++    +++.+.....+... ..+ ..|+....+..++++ 
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al~-   82 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAFK-   82 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHTT-
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHhC-
Confidence            46899999999999999999999885       79998888    44444322222111 111 124443333344444 


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc--------c
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT--------E  142 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~--------~  142 (302)
                            ..|++||.||....     ...+.   .+.+..|+..+..+++.+.++-  ...++++++|.-..        .
T Consensus        83 ------~aD~Vi~~ag~~~~-----~g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~  146 (329)
T 1b8p_A           83 ------DADVALLVGARPRG-----PGMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKS  146 (329)
T ss_dssp             ------TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHT
T ss_pred             ------CCCEEEEeCCCCCC-----CCCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHH
Confidence                  78999999996432     12233   4578899999888888888862  13568888886321        1


Q ss_pred             c-CCCCChhHHHHHHHHHHHHHHHHHHHC
Q 044670          143 I-AGIGSPAYTVSKYGIIALVKILAAELR  170 (302)
Q Consensus       143 ~-~~~~~~~Y~~sK~a~~~~~~~la~e~~  170 (302)
                      . +.|....|+.++.--..+...++.++.
T Consensus       147 ~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          147 APSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             CTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             cCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            1 234444588887777788888887764

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.56  E-value=1.7e-07  Score=86.63  Aligned_cols=78  Identities=19%  Similarity=0.179  Sum_probs=64.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++++|+|+|+ |++|+++++.|++. |++|++++|+.++++.+.+.  ..+..+.+|+.|.+++.++++       .+|
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~--~~~~~~~~D~~d~~~l~~~l~-------~~D   90 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP--SGSKAISLDVTDDSALDKVLA-------DND   90 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG--GTCEEEECCTTCHHHHHHHHH-------TSS
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh--cCCcEEEEecCCHHHHHHHHc-------CCC
Confidence            36789999998 99999999999998 78999999998888777654  245677899999988777765       789


Q ss_pred             EEEEcccCC
Q 044670           80 IMYNNAGIV   88 (302)
Q Consensus        80 ~lv~~Ag~~   88 (302)
                      +|||+++..
T Consensus        91 vVIn~tp~~   99 (467)
T 2axq_A           91 VVISLIPYT   99 (467)
T ss_dssp             EEEECSCGG
T ss_pred             EEEECCchh
Confidence            999999853

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.54  E-value=1.3e-08  Score=95.88  Aligned_cols=99  Identities=22%  Similarity=0.193  Sum_probs=65.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++|+++|||| ||+|++++.+|+++|++|+++.|+.++++++.+.++..+.    ++.|.   +++      ..+.+|+|
T Consensus       363 ~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~~~~----~~~dl---~~~------~~~~~Dil  428 (523)
T 2o7s_A          363 ASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKAL----SLTDL---DNY------HPEDGMVL  428 (523)
T ss_dssp             ---CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC-CE----ETTTT---TTC--------CCSEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCcee----eHHHh---hhc------cccCceEE
Confidence            5789999999 5999999999999999999999999888888777654322    22221   110      11358999


Q ss_pred             EEcccCCCCC---CCCCCCCCHHHHHHHHHHHhhHH
Q 044670           82 YNNAGIVDRG---FASVLDTPKSDLDRVLAVNTTGG  114 (302)
Q Consensus        82 v~~Ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  114 (302)
                      |||+|+....   ..++.+.+.+++..++++|+.+.
T Consensus       429 VN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          429 ANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             EECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            9999974321   12344445556666777777653

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.49  E-value=4e-07  Score=81.11  Aligned_cols=104  Identities=19%  Similarity=0.257  Sum_probs=75.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..+++.+...|++|++++|++++.+.+ +.++..   ...|.++.+++.+.+.++...  ++|++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~---~~~d~~~~~~~~~~~~~~~~~--~~D~v  242 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGE---VFIDFTKEKDIVGAVLKATDG--GAHGV  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCC---EEEETTTCSCHHHHHHHHHTS--CEEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCc---eEEecCccHhHHHHHHHHhCC--CCCEE
Confidence            578999999999999999999999999999999988877544 445433   234887655665556555433  69999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      |+|+|..            +               .++.+++.+.  ..|++|.+++..
T Consensus       243 i~~~g~~------------~---------------~~~~~~~~l~--~~G~iv~~g~~~  272 (347)
T 2hcy_A          243 INVSVSE------------A---------------AIEASTRYVR--ANGTTVLVGMPA  272 (347)
T ss_dssp             EECSSCH------------H---------------HHHHHTTSEE--EEEEEEECCCCT
T ss_pred             EECCCcH------------H---------------HHHHHHHHHh--cCCEEEEEeCCC
Confidence            9999820            0               2344555553  358999988754

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.44  E-value=8.4e-07  Score=68.28  Aligned_cols=74  Identities=18%  Similarity=0.169  Sum_probs=60.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++++|+|+ |.+|.++++.|.++|++|++++++++..+.+.+   ....++.+|.++++.++++      ...+.|++|
T Consensus         6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~------~~~~~d~vi   75 (141)
T 3llv_A            6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED---EGFDAVIADPTDESFYRSL------DLEGVSAVL   75 (141)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEECCTTCHHHHHHS------CCTTCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH---CCCcEEECCCCCHHHHHhC------CcccCCEEE
Confidence            567999998 889999999999999999999999888776654   2467888999999876543      123689999


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      .+.+
T Consensus        76 ~~~~   79 (141)
T 3llv_A           76 ITGS   79 (141)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            8665

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.43  E-value=3.1e-09  Score=97.67  Aligned_cols=43  Identities=23%  Similarity=0.506  Sum_probs=37.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      +.||+++|||++ +||+++++.|++.|++|+++++++.......
T Consensus       263 L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          263 IAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             ccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            579999999987 9999999999999999999999876655443

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.43  E-value=3.4e-07  Score=81.43  Aligned_cols=80  Identities=21%  Similarity=0.339  Sum_probs=60.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+.+.++...   ..|.++.+++.+.+.++..  +++|++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~d~v  229 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDD---AFNYKEESDLTAALKRCFP--NGIDIY  229 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSE---EEETTSCSCSHHHHHHHCT--TCEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCce---EEecCCHHHHHHHHHHHhC--CCCcEE
Confidence            57899999999999999999999999999999998887776654555432   2476665444444444322  479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       230 i~~~g  234 (345)
T 2j3h_A          230 FENVG  234 (345)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.41  E-value=5e-07  Score=79.76  Aligned_cols=104  Identities=16%  Similarity=0.195  Sum_probs=72.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++||||+|+||..+++.+...|++|++++|++++.+.+.+ ++...   ..|.++.+.++++.+...  ..++|++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~~---~~~~~~~~~~~~~~~~~~--~~~~D~v  213 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAWQ---VINYREEDLVERLKEITG--GKKVRVV  213 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCSE---EEETTTSCHHHHHHHHTT--TCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE---EEECCCccHHHHHHHHhC--CCCceEE
Confidence            47899999999999999999999999999999998777665543 54332   247766554444333221  1269999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT  141 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~  141 (302)
                      |+|+|. .                           .++.+++.+.  ..|+++.+++...
T Consensus       214 i~~~g~-~---------------------------~~~~~~~~l~--~~G~iv~~g~~~~  243 (327)
T 1qor_A          214 YDSVGR-D---------------------------TWERSLDCLQ--RRGLMVSFGNSSG  243 (327)
T ss_dssp             EECSCG-G---------------------------GHHHHHHTEE--EEEEEEECCCTTC
T ss_pred             EECCch-H---------------------------HHHHHHHHhc--CCCEEEEEecCCC
Confidence            999981 1                           0244555554  3689999987543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.40  E-value=2.5e-07  Score=71.12  Aligned_cols=75  Identities=20%  Similarity=0.291  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++++|+|+ |++|..+++.|.+.|++|++++|+++..+.+.+   ....++.+|.++++.+.++      ...+.|++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~---~~~~~~~~d~~~~~~l~~~------~~~~~d~v   74 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSL------GIRNFEYV   74 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT---TCSEEEECCTTCHHHHHTT------TGGGCSEE
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hCCEEEEeCCCCHHHHHhc------CCCCCCEE
Confidence            4678999998 999999999999999999999998766544322   2345678899987765443      12368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |++++
T Consensus        75 i~~~~   79 (144)
T 2hmt_A           75 IVAIG   79 (144)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.40  E-value=2.1e-06  Score=75.16  Aligned_cols=79  Identities=18%  Similarity=0.239  Sum_probs=61.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC---ccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ---DNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++++++.+.++.  ...+...++.+.+++.+.+.     
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----  225 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----  225 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence            47899999998 7999999999999998 89999999   7777777665531  23344567777766655554     


Q ss_pred             cCCccEEEEcccC
Q 044670           75 YGKLDIMYNNAGI   87 (302)
Q Consensus        75 ~~~id~lv~~Ag~   87 (302)
                        ..|+|||+...
T Consensus       226 --~aDiIINaTp~  236 (315)
T 3tnl_A          226 --ESVIFTNATGV  236 (315)
T ss_dssp             --TCSEEEECSST
T ss_pred             --CCCEEEECccC
Confidence              68999998764

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.39  E-value=6.5e-07  Score=79.26  Aligned_cols=79  Identities=19%  Similarity=0.281  Sum_probs=58.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++||||+|+||..+++.+...|++|++++|++++.+.+. .++...   ..|.++.+..+++.+...  ..++|++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~---~~d~~~~~~~~~i~~~~~--~~~~d~v  218 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHH---TINYSTQDFAEVVREITG--GKGVDVV  218 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHHHHT--TCCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEECCCHHHHHHHHHHhC--CCCCeEE
Confidence            5789999999999999999999999999999999887766554 354432   347766554433333221  1369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       219 i~~~g  223 (333)
T 1wly_A          219 YDSIG  223 (333)
T ss_dssp             EECSC
T ss_pred             EECCc
Confidence            99998

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.39  E-value=8.2e-08  Score=83.39  Aligned_cols=77  Identities=21%  Similarity=0.227  Sum_probs=56.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCC---eEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED---VCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++|||++ |+|++++++|+++| +|++++|+.++.+++.+.++..   ...+.+|+++.          .+.+++
T Consensus       126 l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~~  193 (287)
T 1nvt_A          126 VKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLDG  193 (287)
T ss_dssp             CCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCTT
T ss_pred             cCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhCC
Confidence            478999999997 99999999999999 9999999988777766554210   00112344431          233468


Q ss_pred             ccEEEEcccCCC
Q 044670           78 LDIMYNNAGIVD   89 (302)
Q Consensus        78 id~lv~~Ag~~~   89 (302)
                      +|+||||++...
T Consensus       194 ~DilVn~ag~~~  205 (287)
T 1nvt_A          194 VDIIINATPIGM  205 (287)
T ss_dssp             CCEEEECSCTTC
T ss_pred             CCEEEECCCCCC
Confidence            999999999754

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.38  E-value=2e-06  Score=67.17  Aligned_cols=78  Identities=14%  Similarity=0.178  Sum_probs=62.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~i   78 (302)
                      |..++++|.|+ |.+|+.+++.|.+.|++|++++++. +..+.+.+.....+.++.+|.++++.++++ ++       +.
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~-------~a   72 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGID-------RC   72 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTT-------TC
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChh-------hC
Confidence            56778999986 9999999999999999999999974 555555554545678899999999876554 33       68


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99988765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.37  E-value=3e-06  Score=78.06  Aligned_cols=109  Identities=21%  Similarity=0.305  Sum_probs=74.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEe--cCC---------CHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHC--DVT---------SEDEITNLVDT   70 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--Dl~---------~~~~v~~~~~~   70 (302)
                      .|++|||+||+|+||..++..+...|++|+++++++++.+.+ ++++....+-..  |+.         +.++.+++.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            478999999999999999999999999999999887776655 455543322211  221         23455555666


Q ss_pred             HHHHcC-CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc
Q 044670           71 AVAKYG-KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT  141 (302)
Q Consensus        71 ~~~~~~-~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~  141 (302)
                      +.+..+ ++|++|+++|.             +.               ++.+++.+.  ..|++|++++..+
T Consensus       299 v~~~~g~g~Dvvid~~G~-------------~~---------------~~~~~~~l~--~~G~iv~~G~~~~  340 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTGR-------------VT---------------FGLSVIVAR--RGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHSSCCSEEEECSCH-------------HH---------------HHHHHHHSC--TTCEEEESCCTTC
T ss_pred             HHHHhCCCceEEEECCCc-------------hH---------------HHHHHHHHh--cCCEEEEEecCCC
Confidence            666554 69999999982             01               133445553  4689999987643

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.36  E-value=8.9e-07  Score=79.13  Aligned_cols=79  Identities=23%  Similarity=0.280  Sum_probs=58.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++||||+|+||..+++.+...|++|++++|++++.+.+ +.++..   ..+|..+.+.++++.+...  .+++|++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~---~~~~~~~~~~~~~~~~~~~--~~~~d~v  235 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA---AGFNYKKEDFSEATLKFTK--GAGVNLI  235 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS---EEEETTTSCHHHHHHHHTT--TSCEEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc---EEEecCChHHHHHHHHHhc--CCCceEE
Confidence            578999999999999999999999999999999988777665 455543   2346666544333322111  1269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       236 i~~~G  240 (354)
T 2j8z_A          236 LDCIG  240 (354)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.35  E-value=8.6e-07  Score=79.26  Aligned_cols=102  Identities=18%  Similarity=0.251  Sum_probs=71.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++|||||+|+||..+++.+...|+ +|+++++++++.+.+.+.++..   ..+|..+.+..+. +.++..  +++|++|
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~---~~~d~~~~~~~~~-~~~~~~--~~~d~vi  235 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD---AAINYKKDNVAEQ-LRESCP--AGVDVYF  235 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS---EEEETTTSCHHHH-HHHHCT--TCEEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc---eEEecCchHHHHH-HHHhcC--CCCCEEE
Confidence            8999999999999999999999999 9999999887777665546543   2357766433222 222211  2699999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT  141 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~  141 (302)
                      +|+|.             +               .++.+++.+.  ..|++|.++....
T Consensus       236 ~~~G~-------------~---------------~~~~~~~~l~--~~G~iv~~G~~~~  264 (357)
T 2zb4_A          236 DNVGG-------------N---------------ISDTVISQMN--ENSHIILCGQISQ  264 (357)
T ss_dssp             ESCCH-------------H---------------HHHHHHHTEE--EEEEEEECCCGGG
T ss_pred             ECCCH-------------H---------------HHHHHHHHhc--cCcEEEEECCccc
Confidence            99981             0               1234555554  3689999886543

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.34  E-value=1.4e-06  Score=77.23  Aligned_cols=79  Identities=25%  Similarity=0.381  Sum_probs=59.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+.+.++...   ..|..+.+..+.+.+ +.  .+++|++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~~-~~--~~~~d~v  222 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDG---AIDYKNEDLAAGLKR-EC--PKGIDVF  222 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSE---EEETTTSCHHHHHHH-HC--TTCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCE---EEECCCHHHHHHHHH-hc--CCCceEE
Confidence            58999999999999999999999999999999999888777656665432   246666443333222 21  2369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       223 i~~~g  227 (336)
T 4b7c_A          223 FDNVG  227 (336)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.34  E-value=1.3e-06  Score=77.96  Aligned_cols=79  Identities=15%  Similarity=0.220  Sum_probs=57.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+||+|+||..+++.+...|++|++++|++++.+. .+.++..   ..+|..+.+..+++.+...  ..++|++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~---~~~d~~~~~~~~~~~~~~~--~~~~D~v  243 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAH---EVFNHREVNYIDKIKKYVG--EKGIDII  243 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCS---EEEETTSTTHHHHHHHHHC--TTCEEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHcCCC---EEEeCCCchHHHHHHHHcC--CCCcEEE
Confidence            47899999999999999999999999999999998877764 3455433   2347766544333322211  1269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+|+|
T Consensus       244 i~~~G  248 (351)
T 1yb5_A          244 IEMLA  248 (351)
T ss_dssp             EESCH
T ss_pred             EECCC
Confidence            99998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.33  E-value=7.8e-07  Score=76.51  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=56.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.++........|+   +++       .+  +..|+
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~---~~~-------~~--~~~Di  183 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM---DEL-------EG--HEFDL  183 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS---GGG-------TT--CCCSE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH---HHh-------cc--CCCCE
Confidence            46899999998 7999999999999999999999999888887776542101112332   221       11  48999


Q ss_pred             EEEcccCCC
Q 044670           81 MYNNAGIVD   89 (302)
Q Consensus        81 lv~~Ag~~~   89 (302)
                      |||+++...
T Consensus       184 vVn~t~~~~  192 (271)
T 1nyt_A          184 IINATSSGI  192 (271)
T ss_dssp             EEECCSCGG
T ss_pred             EEECCCCCC
Confidence            999998643

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.22  E-value=1.1e-05  Score=71.08  Aligned_cols=115  Identities=18%  Similarity=0.235  Sum_probs=73.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHH-HHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQAL-ACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      .++|+||||+|++|..++..|+.+|  ..|++.+++++..... .........+ .. +++..+.+++++       ..|
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v-~~-~~~t~d~~~al~-------gaD   78 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVV-RG-FLGQQQLEAALT-------GMD   78 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEE-EE-EESHHHHHHHHT-------TCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceE-EE-EeCCCCHHHHcC-------CCC
Confidence            3579999999999999999999999  7899998876522111 1111111111 11 223445444444       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                      ++||.||....   +  ..+.   .+.+..|+.++..+.+.+.++-    ...+|+++|
T Consensus        79 vVi~~ag~~~~---~--g~~r---~dl~~~N~~~~~~i~~~i~~~~----p~~~viv~S  125 (326)
T 1smk_A           79 LIIVPAGVPRK---P--GMTR---DDLFKINAGIVKTLCEGIAKCC----PRAIVNLIS  125 (326)
T ss_dssp             EEEECCCCCCC---S--SCCC---SHHHHHHHHHHHHHHHHHHHHC----TTSEEEECC
T ss_pred             EEEEcCCcCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHhhC----CCeEEEEEC
Confidence            99999996432   1  1122   2558899999888888888753    233555555

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.19  E-value=3.2e-05  Score=68.73  Aligned_cols=78  Identities=19%  Similarity=0.208  Sum_probs=56.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++++|+||+|+||...+..+...|++|+++++++++.+.+. +++...   ..|..+.+-.+.+.+.....  ++|++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~~~~~v~~~~~~~--g~D~vi  238 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAH---VLNEKAPDFEATLREVMKAE--QPRIFL  238 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSE---EEETTSTTHHHHHHHHHHHH--CCCEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEECCcHHHHHHHHHHhcCC--CCcEEE
Confidence            489999999999999999999999999999999888776554 455432   23555543333322222222  699999


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      +++|
T Consensus       239 d~~g  242 (349)
T 3pi7_A          239 DAVT  242 (349)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            9998

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.18  E-value=8.9e-06  Score=61.97  Aligned_cols=76  Identities=22%  Similarity=0.373  Sum_probs=57.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++++|+|+ |.+|..+++.|.+.|++|++++|+++..+.+.+..  .+.++..|.++++.+.+.      ...+.|++
T Consensus         3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~--~~~~~~~d~~~~~~l~~~------~~~~~d~v   73 (140)
T 1lss_A            3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDA------GIEDADMY   73 (140)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc--CcEEEEcCCCCHHHHHHc------CcccCCEE
Confidence            3578999987 99999999999999999999999887776665433  345678899887764332      12368999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |++.+
T Consensus        74 i~~~~   78 (140)
T 1lss_A           74 IAVTG   78 (140)
T ss_dssp             EECCS
T ss_pred             EEeeC
Confidence            99865

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.16  E-value=5.5e-06  Score=73.72  Aligned_cols=79  Identities=18%  Similarity=0.337  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|+++|||||+|+||..+++.+... |++|+++++++++.+.+ +.++...   ..|.++.+.+++ +.++... +++|+
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~---~~~~~~~~~~~~-~~~~~~~-~~~d~  243 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADY---VINASMQDPLAE-IRRITES-KGVDA  243 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSE---EEETTTSCHHHH-HHHHTTT-SCEEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCE---EecCCCccHHHH-HHHHhcC-CCceE
Confidence            5789999999999999999999999 99999999988776655 3455332   236665443222 2222111 47999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|+|+|
T Consensus       244 vi~~~g  249 (347)
T 1jvb_A          244 VIDLNN  249 (347)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999998

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.10  E-value=1.3e-05  Score=71.56  Aligned_cols=78  Identities=29%  Similarity=0.383  Sum_probs=58.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+. +++...   ..|..+.+..+.+.+ +.  .+++|++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~---~~~~~~~~~~~~~~~-~~--~~g~Dvv  239 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKR---GINYRSEDFAAVIKA-ET--GQGVDII  239 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCHHHHHHH-HH--SSCEEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCE---EEeCCchHHHHHHHH-Hh--CCCceEE
Confidence            4789999999999999999999999999999999888776554 455432   235555443333322 22  3479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+++|
T Consensus       240 id~~g  244 (353)
T 4dup_A          240 LDMIG  244 (353)
T ss_dssp             EESCC
T ss_pred             EECCC
Confidence            99998

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.09  E-value=7.7e-06  Score=73.32  Aligned_cols=98  Identities=15%  Similarity=0.229  Sum_probs=67.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc---cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD---NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +|++|+|+|| |+||..+++.+...|++|+++++++   ++.+. .+.++.  ..+  | .+ + +.+.+.+ ..  +++
T Consensus       180 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~ga--~~v--~-~~-~-~~~~~~~-~~--~~~  247 (366)
T 2cdc_A          180 NCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEETKT--NYY--N-SS-N-GYDKLKD-SV--GKF  247 (366)
T ss_dssp             TTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHHTC--EEE--E-CT-T-CSHHHHH-HH--CCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHhCC--cee--c-hH-H-HHHHHHH-hC--CCC
Confidence            4999999999 9999999999999999999999987   66543 345543  333  6 55 2 2222222 22  579


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHH-HHHHHhhccCCCCEEEEEcCcc
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA-KHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~-~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      |++|+++|...                           .+ +.+++.+.  ..|++|+++...
T Consensus       248 d~vid~~g~~~---------------------------~~~~~~~~~l~--~~G~iv~~g~~~  281 (366)
T 2cdc_A          248 DVIIDATGADV---------------------------NILGNVIPLLG--RNGVLGLFGFST  281 (366)
T ss_dssp             EEEEECCCCCT---------------------------HHHHHHGGGEE--EEEEEEECSCCC
T ss_pred             CEEEECCCChH---------------------------HHHHHHHHHHh--cCCEEEEEecCC
Confidence            99999998311                           12 44556663  358999988654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.08  E-value=7.9e-06  Score=72.24  Aligned_cols=77  Identities=18%  Similarity=0.326  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+. .++++...   ..|..+.+.    .+++.+..  .++|
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~ga~~---~~~~~~~~~----~~~~~~~~~~~g~D  219 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI-AKEYGAEY---LINASKEDI----LRQVLKFTNGKGVD  219 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE---EEETTTSCH----HHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcCCcE---EEeCCCchH----HHHHHHHhCCCCce
Confidence            57899999999999999999999999999999998877764 44555432   235555433    23333332  2699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|+++|
T Consensus       220 ~vid~~g  226 (334)
T 3qwb_A          220 ASFDSVG  226 (334)
T ss_dssp             EEEECCG
T ss_pred             EEEECCC
Confidence            9999998

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.07  E-value=2.3e-05  Score=68.42  Aligned_cols=80  Identities=19%  Similarity=0.292  Sum_probs=58.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC---ccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ---DNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~---~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++||+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++++++.+.++.  .......++.+.+...+.+.     
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----  219 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----  219 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----
Confidence            46899999998 8999999999999998 89999999   6667776665531  22334456666543333333     


Q ss_pred             cCCccEEEEcccCC
Q 044670           75 YGKLDIMYNNAGIV   88 (302)
Q Consensus        75 ~~~id~lv~~Ag~~   88 (302)
                        ..|+|||+....
T Consensus       220 --~~DiIINaTp~G  231 (312)
T 3t4e_A          220 --SADILTNGTKVG  231 (312)
T ss_dssp             --HCSEEEECSSTT
T ss_pred             --CceEEEECCcCC
Confidence              579999987653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.07  E-value=9.8e-06  Score=71.95  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+. .++...   ..|.++.+-    .+++.+..  .++|
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~---~~d~~~~~~----~~~~~~~~~~~~~d  237 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADE---TVNYTHPDW----PKEVRRLTGGKGAD  237 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE---EEETTSTTH----HHHHHHHTTTTCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE---EEcCCcccH----HHHHHHHhCCCCce
Confidence            4789999999999999999999999999999999887776554 455332   247766532    22233222  3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|+++|
T Consensus       238 ~vi~~~g  244 (343)
T 2eih_A          238 KVVDHTG  244 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.06  E-value=2.1e-06  Score=74.19  Aligned_cols=76  Identities=21%  Similarity=0.291  Sum_probs=56.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLG---EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.++   ..+.+...++.+.   .+.+.       
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l~-------  193 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVIA-------  193 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHHH-------
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHHh-------
Confidence            47899999998 8999999999999998 79999999998887766553   1223334454443   23333       


Q ss_pred             CccEEEEcccC
Q 044670           77 KLDIMYNNAGI   87 (302)
Q Consensus        77 ~id~lv~~Ag~   87 (302)
                      ..|+|||+...
T Consensus       194 ~~DiVInaTp~  204 (283)
T 3jyo_A          194 AADGVVNATPM  204 (283)
T ss_dssp             HSSEEEECSST
T ss_pred             cCCEEEECCCC
Confidence            47999998764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.02  E-value=1.1e-05  Score=70.95  Aligned_cols=77  Identities=21%  Similarity=0.307  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+. +++...   ..|..+.+.    .+++.+..  .++|
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~---~~~~~~~~~----~~~~~~~~~~~g~D  211 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWE---TIDYSHEDV----AKRVLELTDGKKCP  211 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSE---EEETTTSCH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE---EEeCCCccH----HHHHHHHhCCCCce
Confidence            4889999999999999999999999999999999888776554 455332   235555443    23333332  2699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|+++|
T Consensus       212 vvid~~g  218 (325)
T 3jyn_A          212 VVYDGVG  218 (325)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.00  E-value=5.3e-05  Score=66.39  Aligned_cols=142  Identities=15%  Similarity=0.127  Sum_probs=87.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEec--CccHHHH----HHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADV--QDNLGQA----LACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r--~~~~~~~----~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +|+||||+|++|.+++..|+.+|.  .+.+.++  ++++.+.    +....   +..+.+...|    +++.++++    
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~----   73 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIID----   73 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGT----
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhC----
Confidence            689999999999999999999885  5788887  5543332    11111   1122332211    11122233    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc---------cC
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE---------IA  144 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~---------~~  144 (302)
                         ..|++||.||....   +  ..+   ..+.+..|+..+..+++.+.++-     .++|+++|.-..         .+
T Consensus        74 ---gaD~Vi~~Ag~~~~---~--g~~---r~dl~~~N~~i~~~i~~~i~~~~-----~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           74 ---ESDVVIITSGVPRK---E--GMS---RMDLAKTNAKIVGKYAKKIAEIC-----DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             ---TCSEEEECCSCCCC---T--TCC---HHHHHHHHHHHHHHHHHHHHHHC-----CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             ---CCCEEEECCCCCCC---C--CCc---HHHHHHHHHHHHHHHHHHHHHhC-----CeEEEEecCcHHHHHHHHHHhhC
Confidence               78999999996432   1  223   24568999999999999888852     335555553221         12


Q ss_pred             CCCChhHHH-HHHHHHHHHHHHHHHHC
Q 044670          145 GIGSPAYTV-SKYGIIALVKILAAELR  170 (302)
Q Consensus       145 ~~~~~~Y~~-sK~a~~~~~~~la~e~~  170 (302)
                      .+....++. +.+--..+...++..+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            344445666 56556677777777763

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.00  E-value=6.8e-06  Score=70.61  Aligned_cols=73  Identities=15%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|+++|+|+ ||+|++++..|++.|++|++..|+.++.+++.+.++.  .+..  .|+   +++.       +  +..
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~-------~--~~~  181 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIP-------L--QTY  181 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCC-------C--SCC
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhc-------c--CCC
Confidence            46899999998 8999999999999999999999999888888776542  2222  333   1110       0  378


Q ss_pred             cEEEEcccCC
Q 044670           79 DIMYNNAGIV   88 (302)
Q Consensus        79 d~lv~~Ag~~   88 (302)
                      |+|||+++..
T Consensus       182 DivIn~t~~~  191 (272)
T 1p77_A          182 DLVINATSAG  191 (272)
T ss_dssp             SEEEECCCC-
T ss_pred             CEEEECCCCC
Confidence            9999999864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.99  E-value=1.2e-05  Score=70.04  Aligned_cols=77  Identities=18%  Similarity=0.200  Sum_probs=56.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|+++|+|+ ||+|++++..|++.|+ +|++..|+.++++++.+.++....    +..+.+++.       +.....|
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~----~~~~~~~~~-------~~~~~aD  206 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS----AYFSLAEAE-------TRLAEYD  206 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC----CEECHHHHH-------HTGGGCS
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC----ceeeHHHHH-------hhhccCC
Confidence            46899999998 8999999999999998 899999999988888877643210    111222222       2233689


Q ss_pred             EEEEcccCCC
Q 044670           80 IMYNNAGIVD   89 (302)
Q Consensus        80 ~lv~~Ag~~~   89 (302)
                      +||++.+...
T Consensus       207 ivIn~t~~~~  216 (297)
T 2egg_A          207 IIINTTSVGM  216 (297)
T ss_dssp             EEEECSCTTC
T ss_pred             EEEECCCCCC
Confidence            9999998643

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.98  E-value=1.6e-05  Score=70.38  Aligned_cols=77  Identities=17%  Similarity=0.180  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+.+ ++...   ..|..+.+.    .+++.+..  .++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~---~~~~~~~~~----~~~~~~~~~~~g~D  215 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAY---VIDTSTAPL----YETVMELTNGIGAD  215 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSE---EEETTTSCH----HHHHHHHTTTSCEE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcE---EEeCCcccH----HHHHHHHhCCCCCc
Confidence            58899999999999999999999999999999999887765543 55432   235555433    23333322  2699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|+++|
T Consensus       216 vvid~~g  222 (340)
T 3gms_A          216 AAIDSIG  222 (340)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.91  E-value=0.00019  Score=62.57  Aligned_cols=109  Identities=17%  Similarity=0.104  Sum_probs=69.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEec--CccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADV--QDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r--~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +|+||||+|++|.+++..|+.+|.  .+++.++  ++++.+.....+      ...+.+.. |  +.+    .++     
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~----a~~-----   69 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE----DTA-----   69 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG----GGT-----
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH----HhC-----
Confidence            689999999999999999999885  5888888  655443222111      12233322 2  222    133     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA  139 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~  139 (302)
                        ..|++||.||....   +  ..+.   .+.+..|+..+..+.+.+.++    ....+|+++|.
T Consensus        70 --~aDvVi~~ag~~~~---~--g~~r---~dl~~~N~~i~~~i~~~i~~~----~p~~~viv~SN  120 (303)
T 1o6z_A           70 --GSDVVVITAGIPRQ---P--GQTR---IDLAGDNAPIMEDIQSSLDEH----NDDYISLTTSN  120 (303)
T ss_dssp             --TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHTT----CSCCEEEECCS
T ss_pred             --CCCEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHH----CCCcEEEEeCC
Confidence              78999999996432   1  2233   356889988888887777764    23345555554

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.89  E-value=5e-05  Score=70.08  Aligned_cols=84  Identities=17%  Similarity=0.285  Sum_probs=62.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEE--ec--------CCCHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIH--CD--------VTSEDEITNLVDTA   71 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~D--------l~~~~~v~~~~~~~   71 (302)
                      .|++|+|+||+|+||...+..+...|++|+++++++++.+.+ +.++....+-.  .|        ..+.++.+++.+++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            478999999999999999999999999999999877776654 55654322211  11        24566677777777


Q ss_pred             HHHcC--CccEEEEccc
Q 044670           72 VAKYG--KLDIMYNNAG   86 (302)
Q Consensus        72 ~~~~~--~id~lv~~Ag   86 (302)
                      .+..+  ++|++|.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            77553  7999999988

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.88  E-value=5.2e-05  Score=67.80  Aligned_cols=76  Identities=25%  Similarity=0.274  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++++|+|+ |++|+.+++.+...|++|++++|+.++++.+.+.....+..   +..+.+++.+.+.       ..|++
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~DvV  234 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVEL---LYSNSAEIETAVA-------EADLL  234 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEE---EECCHHHHHHHHH-------TCSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCceeEe---eeCCHHHHHHHHc-------CCCEE
Confidence            5689999999 99999999999999999999999988887766544333222   2234455444333       68999


Q ss_pred             EEcccCC
Q 044670           82 YNNAGIV   88 (302)
Q Consensus        82 v~~Ag~~   88 (302)
                      |++++..
T Consensus       235 I~~~~~~  241 (361)
T 1pjc_A          235 IGAVLVP  241 (361)
T ss_dssp             EECCCCT
T ss_pred             EECCCcC
Confidence            9999853

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.88  E-value=5.4e-05  Score=68.13  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=59.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|++++|+|+ |+||+.+++.+...|++|++.+|+.++.+.+.+.++..+.   .|..+.+++.+.+.       ..|+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~---~~~~~~~~l~~~l~-------~aDv  234 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIH---TRYSSAYELEGAVK-------RADL  234 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSE---EEECCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeE---eccCCHHHHHHHHc-------CCCE
Confidence            46899999998 9999999999999999999999998887776655554432   24455666555443       5799


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|++++.
T Consensus       235 Vi~~~~~  241 (377)
T 2vhw_A          235 VIGAVLV  241 (377)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9998874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.88  E-value=3.8e-05  Score=68.78  Aligned_cols=71  Identities=18%  Similarity=0.245  Sum_probs=58.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++|+|.|| |++|+.+++.|++ .++|.+++|+.++++.+.    .....+.+|+.|.+++.++++       +.|+||+
T Consensus        17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~----~~~~~~~~d~~d~~~l~~~~~-------~~DvVi~   83 (365)
T 3abi_A           17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK----EFATPLKVDASNFDKLVEVMK-------EFELVIG   83 (365)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT----TTSEEEECCTTCHHHHHHHHT-------TCSEEEE
T ss_pred             cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh----ccCCcEEEecCCHHHHHHHHh-------CCCEEEE
Confidence            36999998 9999999998865 589999999887776553    456778899999999888776       7899999


Q ss_pred             cccC
Q 044670           84 NAGI   87 (302)
Q Consensus        84 ~Ag~   87 (302)
                      +++.
T Consensus        84 ~~p~   87 (365)
T 3abi_A           84 ALPG   87 (365)
T ss_dssp             CCCG
T ss_pred             ecCC
Confidence            8874

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.87  E-value=2.2e-05  Score=61.29  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=56.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .+++++|.|+ |.+|..+++.|.+.|++|++++|++++.+.+...  ....++..|.++++.+.++      .....|++
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~--~g~~~~~~d~~~~~~l~~~------~~~~ad~V   88 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE--FSGFTVVGDAAEFETLKEC------GMEKADMV   88 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT--CCSEEEESCTTSHHHHHTT------TGGGCSEE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc--CCCcEEEecCCCHHHHHHc------CcccCCEE
Confidence            4678999996 9999999999999999999999988776543211  2345677888887654332      11267999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.+.+
T Consensus        89 i~~~~   93 (155)
T 2g1u_A           89 FAFTN   93 (155)
T ss_dssp             EECSS
T ss_pred             EEEeC
Confidence            98776

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.86  E-value=4.6e-05  Score=67.60  Aligned_cols=76  Identities=22%  Similarity=0.416  Sum_probs=55.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~id   79 (302)
                      .|+++||+||+|+||..++..+...|++|+++++++++.+.+. .++... ++  |..  +++   .+++.+..+  ++|
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~-v~--~~~--~~~---~~~v~~~~~~~g~D  229 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADI-VL--PLE--EGW---AKAVREATGGAGVD  229 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE-EE--ESS--TTH---HHHHHHHTTTSCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE-Ee--cCc--hhH---HHHHHHHhCCCCce
Confidence            4889999999999999999999999999999999888776544 455432 22  333  222   333333332  599


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|+++|
T Consensus       230 vvid~~g  236 (342)
T 4eye_A          230 MVVDPIG  236 (342)
T ss_dssp             EEEESCC
T ss_pred             EEEECCc
Confidence            9999998

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.83  E-value=3e-05  Score=62.27  Aligned_cols=76  Identities=16%  Similarity=0.158  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .+++++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+.+ .  .+.++.+|.++++.+.++     ....+.|.
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-~--g~~~~~gd~~~~~~l~~~-----~~~~~ad~  108 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-E--GRNVISGDATDPDFWERI-----LDTGHVKL  108 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-T--TCCEEECCTTCHHHHHTB-----CSCCCCCE
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-C--CCCEEEcCCCCHHHHHhc-----cCCCCCCE
Confidence            3567889985 99999999999999 9999999999887766543 2  345677899998765433     01236899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.+.+
T Consensus       109 vi~~~~  114 (183)
T 3c85_A          109 VLLAMP  114 (183)
T ss_dssp             EEECCS
T ss_pred             EEEeCC
Confidence            998665

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.81  E-value=6.9e-05  Score=67.00  Aligned_cols=103  Identities=21%  Similarity=0.281  Sum_probs=69.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..+++.+...|++|+++++++++.+.+. .++... .  .|..+.+ +.+.+.+..  .+++|++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~-~--~~~~~~~-~~~~~~~~~--~~g~D~v  235 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDR-P--INYKTEP-VGTVLKQEY--PEGVDVV  235 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSE-E--EETTTSC-HHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcE-E--EecCChh-HHHHHHHhc--CCCCCEE
Confidence            4789999999999999999999999999999999877766554 455432 2  3444432 222232221  1369999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT  141 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~  141 (302)
                      |+++|.             +.               ++.+++.+.+  .|++|.+++...
T Consensus       236 id~~g~-------------~~---------------~~~~~~~l~~--~G~iv~~g~~~~  265 (362)
T 2c0c_A          236 YESVGG-------------AM---------------FDLAVDALAT--KGRLIVIGFISG  265 (362)
T ss_dssp             EECSCT-------------HH---------------HHHHHHHEEE--EEEEEECCCGGG
T ss_pred             EECCCH-------------HH---------------HHHHHHHHhc--CCEEEEEeCCCC
Confidence            999982             01               2344555543  589999987654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.80  E-value=2.1e-05  Score=68.47  Aligned_cols=88  Identities=16%  Similarity=0.232  Sum_probs=58.6

Q ss_pred             CCCE-EEEeCC-C-----------------ChHHHHHHHHHHHcCCEEEEEecCccHHH--------HHHHHh------C
Q 044670            2 EGKV-AIITGG-A-----------------SGIGAAAAKLFHENGAKVVIADVQDNLGQ--------ALACKL------G   48 (302)
Q Consensus         2 ~gk~-vlVTGa-s-----------------~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~------~   48 (302)
                      +||+ ||||+| |                 |-.|.++|++++++||.|+++.+......        ...+.+      +
T Consensus        35 ~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~  114 (313)
T 1p9o_A           35 QGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPAL  114 (313)
T ss_dssp             TTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-C
T ss_pred             cCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccc
Confidence            5777 999954 5                 55999999999999999999887533110        011110      1


Q ss_pred             CCeEEEEecCCCHHHHHHHHHHH------------------------------HHHcCCccEEEEcccCCC
Q 044670           49 EDVCYIHCDVTSEDEITNLVDTA------------------------------VAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        49 ~~~~~~~~Dl~~~~~v~~~~~~~------------------------------~~~~~~id~lv~~Ag~~~   89 (302)
                      .....+..|..+.+.+.+++.+.                              .+.++..|++|++|++..
T Consensus       115 ~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          115 SGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             cccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            23345666777666666655433                              233567899999999864

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.78  E-value=0.0001  Score=56.45  Aligned_cols=73  Identities=10%  Similarity=0.089  Sum_probs=58.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++++|.|+ |.+|..+++.|.+.|+.|++++++++..+.+.+   ..+.++.+|.++++.++++      ...+.|.+|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~---~g~~~i~gd~~~~~~l~~a------~i~~ad~vi~   77 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE---RGVRAVLGNAANEEIMQLA------HLECAKWLIL   77 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH---TTCEEEESCTTSHHHHHHT------TGGGCSEEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH---cCCCEEECCCCCHHHHHhc------CcccCCEEEE
Confidence            35788887 889999999999999999999999988877654   3567788999999875543      1125788888


Q ss_pred             ccc
Q 044670           84 NAG   86 (302)
Q Consensus        84 ~Ag   86 (302)
                      +.+
T Consensus        78 ~~~   80 (140)
T 3fwz_A           78 TIP   80 (140)
T ss_dssp             CCS
T ss_pred             ECC
Confidence            665

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.77  E-value=4.4e-05  Score=65.43  Aligned_cols=72  Identities=21%  Similarity=0.269  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCC-CeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGE-DVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      +++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.++. .+..+  ++.+.+   .         ...
T Consensus       118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~--~~~~l~---~---------~~~  182 (272)
T 3pwz_A          118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRIS--RYEALE---G---------QSF  182 (272)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEE--CSGGGT---T---------CCC
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEe--eHHHhc---c---------cCC
Confidence            46899999998 7999999999999996 899999999999888887753 23332  222211   0         268


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |+|||+...
T Consensus       183 DivInaTp~  191 (272)
T 3pwz_A          183 DIVVNATSA  191 (272)
T ss_dssp             SEEEECSSG
T ss_pred             CEEEECCCC
Confidence            999998754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.75  E-value=0.00049  Score=61.34  Aligned_cols=80  Identities=19%  Similarity=0.208  Sum_probs=58.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|++|||+|+ |++|...+......|++ |+++++++++.+.+.+. ...+..+..|-.+.+++.   +++.+..  .++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~---~~v~~~t~g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESA---KKIVESFGGIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHH---HHHHHHTSSCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHH---HHHHHHhCCCCC
Confidence            4789999998 99999999888889998 88898888877665544 444444455545555543   3444433  269


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |++|.++|
T Consensus       254 Dvvid~~g  261 (363)
T 3m6i_A          254 AVALECTG  261 (363)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999988

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.75  E-value=0.00011  Score=64.99  Aligned_cols=101  Identities=21%  Similarity=0.252  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+|| |+||..+++.+...|++|+++++++++.+.+. .++...   ..|..+.+ +.+.+.++.   +.+|++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~---~~d~~~~~-~~~~~~~~~---~~~d~v  234 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADL---VVNPLKED-AAKFMKEKV---GGVHAA  234 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSE---EECTTTSC-HHHHHHHHH---SSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCE---EecCCCcc-HHHHHHHHh---CCCCEE
Confidence            4789999999 88999999999999999999999888776553 455432   24666543 222222222   579999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      |+++|..            +               .++.+++.+.  ..|+++.+++..
T Consensus       235 id~~g~~------------~---------------~~~~~~~~l~--~~G~~v~~g~~~  264 (339)
T 1rjw_A          235 VVTAVSK------------P---------------AFQSAYNSIR--RGGACVLVGLPP  264 (339)
T ss_dssp             EESSCCH------------H---------------HHHHHHHHEE--EEEEEEECCCCS
T ss_pred             EECCCCH------------H---------------HHHHHHHHhh--cCCEEEEecccC
Confidence            9999831            1               2344555554  358999888654

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.73  E-value=3.6e-05  Score=66.28  Aligned_cols=71  Identities=14%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +++|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+.++.  .+....  +.+..             ..
T Consensus       124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~--~~~l~-------------~~  187 (281)
T 3o8q_A          124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA--FEQLK-------------QS  187 (281)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE--GGGCC-------------SC
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee--HHHhc-------------CC
Confidence            46899999998 7999999999999996 899999999988888777642  233332  21110             26


Q ss_pred             ccEEEEcccC
Q 044670           78 LDIMYNNAGI   87 (302)
Q Consensus        78 id~lv~~Ag~   87 (302)
                      .|+|||+...
T Consensus       188 aDiIInaTp~  197 (281)
T 3o8q_A          188 YDVIINSTSA  197 (281)
T ss_dssp             EEEEEECSCC
T ss_pred             CCEEEEcCcC
Confidence            8999998764

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.70  E-value=0.00018  Score=63.84  Aligned_cols=76  Identities=20%  Similarity=0.367  Sum_probs=55.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~   80 (302)
                      .|+++||+||+|+||...+..+...|++|+++++++++.+.+. +++... +  .|-.+  ++   .+++.+.. +.+|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-v--i~~~~--~~---~~~~~~~~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADI-V--LNHKE--SL---LNQFKTQGIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSE-E--ECTTS--CH---HHHHHHHTCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcE-E--EECCc--cH---HHHHHHhCCCCccE
Confidence            5899999999999999999999999999999999887766554 455432 2  24333  22   23333332 36999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +++++|
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999988

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.70  E-value=0.00014  Score=65.07  Aligned_cols=75  Identities=21%  Similarity=0.293  Sum_probs=57.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+|+ |+||..++..+...|++|+++++++++.+...+.++...   ..|..+.+.+.++       .+.+|++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~---v~~~~~~~~~~~~-------~~~~D~v  255 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADS---FLVSRDQEQMQAA-------AGTLDGI  255 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSE---EEETTCHHHHHHT-------TTCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCce---EEeccCHHHHHHh-------hCCCCEE
Confidence            5889999996 999999999999999999999999888776665665432   2366665443222       2479999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |+++|.
T Consensus       256 id~~g~  261 (366)
T 1yqd_A          256 IDTVSA  261 (366)
T ss_dssp             EECCSS
T ss_pred             EECCCc
Confidence            999984

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.70  E-value=0.00011  Score=63.90  Aligned_cols=72  Identities=18%  Similarity=0.295  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++++|+||+|++|..++..+...|++|+++++++++.+.+. .++...   ..|..+ .+-    .+++    +++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~---~~~~~~~~~~----~~~~----~~~d~  192 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEE---AATYAEVPER----AKAW----GGLDL  192 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSE---EEEGGGHHHH----HHHT----TSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE---EEECCcchhH----HHHh----cCceE
Confidence            4789999999999999999999999999999999887766553 454332   235544 322    2222    47999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|+ +|
T Consensus       193 vid-~g  197 (302)
T 1iz0_A          193 VLE-VR  197 (302)
T ss_dssp             EEE-CS
T ss_pred             EEE-CC
Confidence            999 87

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.66  E-value=8.6e-05  Score=65.82  Aligned_cols=76  Identities=24%  Similarity=0.419  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+||+|+||..++..+...|++|+++ +++++.+. .++++..  .  .| .+.+ +.+.+.+... ...+|++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~lGa~--~--i~-~~~~-~~~~~~~~~~-~~g~D~v  220 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDLGAT--P--ID-ASRE-PEDYAAEHTA-GQGFDLV  220 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHHTSE--E--EE-TTSC-HHHHHHHHHT-TSCEEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHcCCC--E--ec-cCCC-HHHHHHHHhc-CCCceEE
Confidence            47899999999999999999999999999998 66666554 4556543  2  34 3332 2222222221 1269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+++|
T Consensus       221 id~~g  225 (343)
T 3gaz_A          221 YDTLG  225 (343)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.65  E-value=0.00014  Score=60.11  Aligned_cols=73  Identities=23%  Similarity=0.243  Sum_probs=59.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +++|.|+ |.+|.++++.|.++|+.|++++++++..+.+.+..  ...++.+|.++++.++++      .....|++|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~--~~~~i~gd~~~~~~l~~a------~i~~ad~vi~~   72 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL--KATIIHGDGSHKEILRDA------EVSKNDVVVIL   72 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS--SSEEEESCTTSHHHHHHH------TCCTTCEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc--CCeEEEcCCCCHHHHHhc------CcccCCEEEEe
Confidence            5899997 99999999999999999999999998887766543  457889999998876543      12367999876


Q ss_pred             cc
Q 044670           85 AG   86 (302)
Q Consensus        85 Ag   86 (302)
                      .+
T Consensus        73 ~~   74 (218)
T 3l4b_C           73 TP   74 (218)
T ss_dssp             CS
T ss_pred             cC
Confidence            54

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.65  E-value=3.1e-05  Score=59.67  Aligned_cols=70  Identities=19%  Similarity=0.237  Sum_probs=54.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++++|.|+ |++|+.+++.|.+.|++|++.+|+.++.+.+.+.++.  ...  +..+.   .++++       ..|++|
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~--~~~--~~~~~---~~~~~-------~~Divi   85 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEY--EYV--LINDI---DSLIK-------NNDVII   85 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTC--EEE--ECSCH---HHHHH-------TCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCC--ceE--eecCH---HHHhc-------CCCEEE
Confidence            789999996 9999999999999999999999999988887777653  221  23333   23333       689999


Q ss_pred             EcccC
Q 044670           83 NNAGI   87 (302)
Q Consensus        83 ~~Ag~   87 (302)
                      ++.+.
T Consensus        86 ~at~~   90 (144)
T 3oj0_A           86 TATSS   90 (144)
T ss_dssp             ECSCC
T ss_pred             EeCCC
Confidence            98874

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.62  E-value=0.00035  Score=61.18  Aligned_cols=111  Identities=15%  Similarity=0.248  Sum_probs=70.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCC---HHHHHHHHHHHHHHcCCcc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTS---EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~v~~~~~~~~~~~~~id   79 (302)
                      +|.|+||+|++|..++..|+..|  ..|++.++++  .+.....+....  ...++..   ..+.+++++       ..|
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~--~~~~l~~~~~t~d~~~a~~-------~aD   70 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIE--TRATVKGYLGPEQLPDCLK-------GCD   70 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSS--SSCEEEEEESGGGHHHHHT-------TCS
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccC--cCceEEEecCCCCHHHHhC-------CCC
Confidence            68999999999999999999988  7899999987  222222332111  0011111   122333344       789


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ++|+.||....   +  ..+.   .+.+..|......+.+.+.++.   ..++++++|
T Consensus        71 vVvi~ag~~~~---~--g~~r---~dl~~~n~~i~~~i~~~i~~~~---p~a~viv~s  117 (314)
T 1mld_A           71 VVVIPAGVPRK---P--GMTR---DDLFNTNATIVATLTAACAQHC---PDAMICIIS  117 (314)
T ss_dssp             EEEECCSCCCC---T--TCCG---GGGHHHHHHHHHHHHHHHHHHC---TTSEEEECS
T ss_pred             EEEECCCcCCC---C--CCcH---HHHHHHHHHHHHHHHHHHHhhC---CCeEEEEEC
Confidence            99999997542   1  1222   2356778777777777777653   456788765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.57  E-value=0.00011  Score=64.96  Aligned_cols=118  Identities=13%  Similarity=0.068  Sum_probs=70.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++++|.|+|++|++|..++..++..|  .+|++.++++++++.....+.... +...++.-..+..+.++       ..
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~~~i~~t~d~~~al~-------dA   77 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEGLNLTFTSDIKEALT-------DA   77 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTTCCCEEESCHHHHHT-------TE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCCCceEEcCCHHHHhC-------CC
Confidence            567899999999999999999999999  479999998876654322221000 00001110011222233       68


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCE-EEEEc
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGC-ILFTA  137 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-iv~~s  137 (302)
                      |++|.+||....   +  ..   .-.+.+..|..-...+.+.+.++-   ..+. ++++|
T Consensus        78 DvVvitaG~p~k---p--G~---~R~dLl~~N~~I~~~i~~~i~~~~---p~a~~vlvvs  126 (343)
T 3fi9_A           78 KYIVSSGGAPRK---E--GM---TREDLLKGNAEIAAQLGKDIKSYC---PDCKHVIIIF  126 (343)
T ss_dssp             EEEEECCC---------------CHHHHHHHHHHHHHHHHHHHHHHC---TTCCEEEECS
T ss_pred             CEEEEccCCCCC---C--CC---CHHHHHHHHHHHHHHHHHHHHHhc---cCcEEEEEec
Confidence            999999996321   1  12   234667888776666666666652   3453 55554

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.53  E-value=0.00035  Score=62.64  Aligned_cols=75  Identities=24%  Similarity=0.355  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+||+|+||..++..+...|++|+++++ +++.+. .++++... .  .|..+.+-    .+++.+ .+++|++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lGa~~-v--~~~~~~~~----~~~~~~-~~g~D~v  252 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLGADD-V--IDYKSGSV----EEQLKS-LKPFDFI  252 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTTCSE-E--EETTSSCH----HHHHHT-SCCBSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcCCCE-E--EECCchHH----HHHHhh-cCCCCEE
Confidence            4789999999999999999998899999998884 444443 35565432 2  35554332    222222 2479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |+++|
T Consensus       253 id~~g  257 (375)
T 2vn8_A          253 LDNVG  257 (375)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99998

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.50  E-value=0.002  Score=57.13  Aligned_cols=79  Identities=16%  Similarity=0.203  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHH--HcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVA--KYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~--~~~~i   78 (302)
                      .|++|||+|+ |++|...+..+...|++|+++++++++.+.+ +.++.. ..  .|..+ .+..+++.+ ...  ..+++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~-~~--~~~~~~~~~~~~i~~-~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGAD-VT--LVVDPAKEEESSIIE-RIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCS-EE--EECCTTTSCHHHHHH-HHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCC-EE--EcCcccccHHHHHHH-HhccccCCCC
Confidence            4789999997 9999999998888999999999887776554 455543 22  34443 222222222 111  01369


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |++|+++|
T Consensus       242 D~vid~~g  249 (352)
T 1e3j_A          242 NVTIDCSG  249 (352)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999998

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.45  E-value=0.00052  Score=57.97  Aligned_cols=76  Identities=16%  Similarity=0.320  Sum_probs=54.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc-------------------cHHHHHHHHh---CC--CeEEEEe
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQD-------------------NLGQALACKL---GE--DVCYIHC   56 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~---~~--~~~~~~~   56 (302)
                      ++++|+|.|+ ||+|.++++.|++.|. ++++++++.                   ++.+.+.+.+   +.  ++..+..
T Consensus        30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  108 (249)
T 1jw9_B           30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA  108 (249)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence            4678999996 8999999999999996 899999886                   6666655444   33  3455555


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 044670           57 DVTSEDEITNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        57 Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      +++ .+.+.++++       ..|+||.+..
T Consensus       109 ~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          109 LLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             cCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            565 344444444       6899998764

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.44  E-value=0.0028  Score=54.41  Aligned_cols=43  Identities=16%  Similarity=0.050  Sum_probs=36.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      +-++|.|.|+ |.+|..++..|++.|++|++.+|+++..+...+
T Consensus         3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~   45 (283)
T 4e12_A            3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKK   45 (283)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence            4467888876 889999999999999999999999887665443

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.43  E-value=4.8e-05  Score=67.13  Aligned_cols=113  Identities=13%  Similarity=0.096  Sum_probs=69.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--E-----EEEEecCcc--HHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--K-----VVIADVQDN--LGQALACKL---G-EDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~-----V~~~~r~~~--~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      ++|.||||+|+||.+++..|+..|.  .     +++.++++.  +.+.....+   . ....-+.  .++  ...+.++ 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~~~~~-   78 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEEIAFK-   78 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHHHHTT-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcHHHhC-
Confidence            5799999999999999999998875  4     888888642  333222222   1 1111111  111  1112233 


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcC
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTAS  138 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS  138 (302)
                            ..|++|+.||....   +  ..+   -.+.++.|......++..+.++-   ..+ +++++|-
T Consensus        79 ------daDvVvitAg~prk---p--G~t---R~dll~~N~~i~~~i~~~i~~~~---~~~~~vivvsN  130 (333)
T 5mdh_A           79 ------DLDVAILVGSMPRR---D--GME---RKDLLKANVKIFKCQGAALDKYA---KKSVKVIVVGN  130 (333)
T ss_dssp             ------TCSEEEECCSCCCC---T--TCC---TTTTHHHHHHHHHHHHHHHHHHS---CTTCEEEECSS
T ss_pred             ------CCCEEEEeCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHhC---CCCeEEEEcCC
Confidence                  68999999986432   1  122   34667888888777777777752   234 4666663

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.43  E-value=0.0014  Score=58.54  Aligned_cols=78  Identities=18%  Similarity=0.345  Sum_probs=54.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+. .++.. .+  .|..+ .+++.+.+.++..  +.+|
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~-~v--i~~~~~~~~~~~~~~~~~~--~g~D  264 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGAT-DF--VNPNDHSEPISQVLSKMTN--GGVD  264 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCC-EE--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCc-eE--EeccccchhHHHHHHHHhC--CCCC
Confidence            4789999996 9999999998888999 7999998888776553 55542 22  34432 1223333333322  4799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       265 ~vid~~g  271 (374)
T 1cdo_A          265 FSLECVG  271 (374)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.42  E-value=0.00045  Score=62.62  Aligned_cols=72  Identities=21%  Similarity=0.377  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.+++.+.++..  .  .+..   ++.+.+.       ..|
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~--~--~~~~---~l~~~l~-------~aD  229 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--A--VRFD---ELVDHLA-------RSD  229 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--E--CCGG---GHHHHHH-------TCS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--e--ecHH---hHHHHhc-------CCC
Confidence            36899999998 9999999999999998 8999999988877777666542  2  2322   3333332       689


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +||.+.+.
T Consensus       230 vVi~at~~  237 (404)
T 1gpj_A          230 VVVSATAA  237 (404)
T ss_dssp             EEEECCSS
T ss_pred             EEEEccCC
Confidence            99999864

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.39  E-value=0.0012  Score=58.80  Aligned_cols=76  Identities=17%  Similarity=0.300  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   79 (302)
                      .|++|||+||+|++|...+..+.. .|++|+++++++++.+.+ ++++... +  .|-.+  ++   .+++.+.. +++|
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~-v--i~~~~--~~---~~~v~~~~~~g~D  241 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHH-V--IDHSK--PL---AAEVAALGLGAPA  241 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSE-E--ECTTS--CH---HHHHHTTCSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCE-E--EeCCC--CH---HHHHHHhcCCCce
Confidence            478999999999999887776655 589999999988776654 4465432 2  24433  22   23333322 3799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.++|
T Consensus       242 vvid~~g  248 (363)
T 4dvj_A          242 FVFSTTH  248 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999888

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.38  E-value=0.00026  Score=59.04  Aligned_cols=71  Identities=14%  Similarity=0.185  Sum_probs=56.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCccEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKLDIM   81 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~id~l   81 (302)
                      .++++|.|+ |.+|..+++.|.++|+ |++++++++..+.+.    ..+.++.+|.++++.++++ ++       ..|.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~-------~ad~v   75 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKANVR-------GARAV   75 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH----TTCEEEESCTTCHHHHHHTTCT-------TCSEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh----cCCeEEEcCCCCHHHHHhcCcc-------hhcEE
Confidence            357899998 8999999999999999 999999988776554    3478899999999876554 33       67988


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.+.+
T Consensus        76 i~~~~   80 (234)
T 2aef_A           76 IVDLE   80 (234)
T ss_dssp             EECCS
T ss_pred             EEcCC
Confidence            88654

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.36  E-value=0.0002  Score=58.72  Aligned_cols=42  Identities=19%  Similarity=0.344  Sum_probs=37.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK   46 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   46 (302)
                      +++|+||+|.+|.++++.|++.|++|++.+|++++.+.+.+.
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            688999999999999999999999999999998777665543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.32  E-value=0.00041  Score=61.48  Aligned_cols=101  Identities=19%  Similarity=0.281  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|+++||+|+ |+||..+++.+...|+ +|+++++++++.+.+ +.++... .  .|..+++ +   .+++.+..  ..+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~-~--~~~~~~~-~---~~~v~~~~~g~g~  237 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADY-V--INPFEED-V---VKEVMDITDGNGV  237 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSE-E--ECTTTSC-H---HHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCE-E--ECCCCcC-H---HHHHHHHcCCCCC
Confidence            4789999999 9999999999999999 899999987766554 3455322 2  3554433 2   23333322  259


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      |++|+++|.            .               ..++.+++.+.  ..|++|.+++..
T Consensus       238 D~vid~~g~------------~---------------~~~~~~~~~l~--~~G~iv~~g~~~  270 (348)
T 2d8a_A          238 DVFLEFSGA------------P---------------KALEQGLQAVT--PAGRVSLLGLYP  270 (348)
T ss_dssp             EEEEECSCC------------H---------------HHHHHHHHHEE--EEEEEEECCCCS
T ss_pred             CEEEECCCC------------H---------------HHHHHHHHHHh--cCCEEEEEccCC
Confidence            999999982            0               12344556664  368999988754

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.29  E-value=0.00081  Score=57.33  Aligned_cols=66  Identities=18%  Similarity=0.221  Sum_probs=52.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. .++  +...  ++.+.              ...|+||
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~--~~~~--~~~~l--------------~~~DiVI  177 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG--CDCF--MEPPK--------------SAFDLII  177 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT--CEEE--SSCCS--------------SCCSEEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC--CeEe--cHHHh--------------ccCCEEE
Confidence            789999997 99999999999999999999999999988887 665  2322  23221              1579999


Q ss_pred             EcccCC
Q 044670           83 NNAGIV   88 (302)
Q Consensus        83 ~~Ag~~   88 (302)
                      |+....
T Consensus       178 naTp~G  183 (269)
T 3phh_A          178 NATSAS  183 (269)
T ss_dssp             ECCTTC
T ss_pred             EcccCC
Confidence            987653

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.28  E-value=0.00027  Score=62.11  Aligned_cols=74  Identities=15%  Similarity=0.180  Sum_probs=50.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +++|+||+|++|...+..+...|++|+++++++++.+.+ ++++... .  .|..+.+  .+.+.++.  .+++|++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~-~--i~~~~~~--~~~~~~~~--~~~~d~vid~  223 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKE-V--LAREDVM--AERIRPLD--KQRWAAAVDP  223 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSE-E--EECC-----------CC--SCCEEEEEEC
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcE-E--EecCCcH--HHHHHHhc--CCcccEEEEC
Confidence            799999999999999999889999999999987776655 3455432 2  3544432  12222221  1369999999


Q ss_pred             cc
Q 044670           85 AG   86 (302)
Q Consensus        85 Ag   86 (302)
                      +|
T Consensus       224 ~g  225 (328)
T 1xa0_A          224 VG  225 (328)
T ss_dssp             ST
T ss_pred             Cc
Confidence            98

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.28  E-value=0.0008  Score=60.02  Aligned_cols=78  Identities=18%  Similarity=0.275  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+| +|++|...+..+...|++|+++++++++.+.+ +.++... +  .| .+.+++.+.+.++... .++|++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~-v--i~-~~~~~~~~~v~~~~~g-~g~D~v  261 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADH-G--IN-RLEEDWVERVYALTGD-RGADHI  261 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSE-E--EE-TTTSCHHHHHHHHHTT-CCEEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCE-E--Ec-CCcccHHHHHHHHhCC-CCceEE
Confidence            478999999 89999999999889999999999988776654 4555432 2  24 3333333333332211 269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.++|
T Consensus       262 id~~g  266 (363)
T 3uog_A          262 LEIAG  266 (363)
T ss_dssp             EEETT
T ss_pred             EECCC
Confidence            99998

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.27  E-value=0.00073  Score=60.13  Aligned_cols=75  Identities=19%  Similarity=0.275  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|+|+|+ |+||...+..+...|++|+++++++++.+.+.+.++... +  .|..+.+.+.+       ..+.+|++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~-v--i~~~~~~~~~~-------~~~g~D~v  248 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD-Y--VIGSDQAKMSE-------LADSLDYV  248 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC-E--EETTCHHHHHH-------STTTEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce-e--eccccHHHHHH-------hcCCCCEE
Confidence            5889999995 999999998888899999999998887766654565432 2  35555433222       22479999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |.++|.
T Consensus       249 id~~g~  254 (357)
T 2cf5_A          249 IDTVPV  254 (357)
T ss_dssp             EECCCS
T ss_pred             EECCCC
Confidence            999984

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.26  E-value=0.0011  Score=58.35  Aligned_cols=76  Identities=21%  Similarity=0.285  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+.+ ++++....   .|..+.+.    .+.+.+..+++|++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~~~----~~~~~~~~g~~d~v  236 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVA---VNARDTDP----AAWLQKEIGGAHGV  236 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEE---EETTTSCH----HHHHHHHHSSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCEE---EeCCCcCH----HHHHHHhCCCCCEE
Confidence            5789999997 8999999988888999999999988777654 45554322   35555333    23333344689999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.++|
T Consensus       237 id~~g  241 (340)
T 3s2e_A          237 LVTAV  241 (340)
T ss_dssp             EESSC
T ss_pred             EEeCC
Confidence            99887

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.17  E-value=9.1e-05  Score=63.61  Aligned_cols=69  Identities=14%  Similarity=0.159  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +||+++|+|+ ||.|++++..|++.|+ +|+++.|+.++.+++..    .+...     ..++..+.+       ...|+
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~----~~~~~-----~~~~~~~~~-------~~aDi  178 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL----NINKI-----NLSHAESHL-------DEFDI  178 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS----CCEEE-----CHHHHHHTG-------GGCSE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH----hcccc-----cHhhHHHHh-------cCCCE
Confidence            5889999997 8999999999999998 89999999887655432    22221     222322222       26799


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |||+...
T Consensus       179 VInaTp~  185 (277)
T 3don_A          179 IINTTPA  185 (277)
T ss_dssp             EEECCC-
T ss_pred             EEECccC
Confidence            9998754

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.15  E-value=0.0036  Score=55.55  Aligned_cols=77  Identities=21%  Similarity=0.318  Sum_probs=53.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCC--CHHHHHHHHHHHHHHc-CC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVT--SEDEITNLVDTAVAKY-GK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~~-~~   77 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++.. .+  .|..  +.++.   .+++.+.. ++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~-~v--i~~~~~~~~~~---~~~i~~~~~~g  242 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGAD-LV--LQISKESPQEI---ARKVEGQLGCK  242 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCS-EE--EECSSCCHHHH---HHHHHHHHTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC-EE--EcCcccccchH---HHHHHHHhCCC
Confidence            4789999996 9999999888888999 899999887766544 455543 22  3444  23332   23333222 46


Q ss_pred             ccEEEEccc
Q 044670           78 LDIMYNNAG   86 (302)
Q Consensus        78 id~lv~~Ag   86 (302)
                      +|++|.++|
T Consensus       243 ~D~vid~~g  251 (356)
T 1pl8_A          243 PEVTIECTG  251 (356)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999988

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.15  E-value=0.0019  Score=57.69  Aligned_cols=76  Identities=12%  Similarity=0.116  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~   80 (302)
                      .|++|||+||+|++|...+..+...|++|+.+. ++++.+ ..++++... +  .|..+.+-    .+++.+.. +++|+
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~-v--i~~~~~~~----~~~v~~~t~g~~d~  234 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEE-V--FDYRAPNL----AQTIRTYTKNNLRY  234 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSE-E--EETTSTTH----HHHHHHHTTTCCCE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcE-E--EECCCchH----HHHHHHHccCCccE
Confidence            478999999999999999999889999998886 555544 556666432 2  35554432    33333332 46999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      ++.++|
T Consensus       235 v~d~~g  240 (371)
T 3gqv_A          235 ALDCIT  240 (371)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999998

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0017  Score=57.74  Aligned_cols=76  Identities=24%  Similarity=0.326  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~id   79 (302)
                      .|++|||+|| |++|...+..+... |++|+++++++++.+.+ +.++... +  .|..++  +.+.+.++.  .+ ++|
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~--~~~~v~~~~--~g~g~D  256 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADH-V--VDARRD--PVKQVMELT--RGRGVN  256 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSE-E--EETTSC--HHHHHHHHT--TTCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCE-E--Eeccch--HHHHHHHHh--CCCCCc
Confidence            4789999999 89999988888888 99999999988776655 3565432 2  355543  333333322  13 699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       257 vvid~~G  263 (359)
T 1h2b_A          257 VAMDFVG  263 (359)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.13  E-value=0.0021  Score=57.48  Aligned_cols=74  Identities=27%  Similarity=0.390  Sum_probs=54.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|||+|+ |++|...+..+...|++|+++++++++.+.+. +++...   ..|..+.+.++    ++.   +++|++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~---vi~~~~~~~~~----~~~---~g~Dvv  261 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADE---VVNSRNADEMA----AHL---KSFDFI  261 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSE---EEETTCHHHHH----TTT---TCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcE---EeccccHHHHH----Hhh---cCCCEE
Confidence            4789999998 89999999888889999999999888776554 455432   23566654332    222   479999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |.++|.
T Consensus       262 id~~g~  267 (369)
T 1uuf_A          262 LNTVAA  267 (369)
T ss_dssp             EECCSS
T ss_pred             EECCCC
Confidence            999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.12  E-value=0.00063  Score=60.14  Aligned_cols=76  Identities=21%  Similarity=0.306  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|+++||+|| |++|..++..+...|+ +|+++++++++.+.+.+ + .. .  ..|..+. ++.+.+.++.  ..++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~-~--v~~~~~~-~~~~~~~~~~--~~g~D~  234 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-AD-R--LVNPLEE-DLLEVVRRVT--GSGVEV  234 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CS-E--EECTTTS-CHHHHHHHHH--SSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HH-h--ccCcCcc-CHHHHHHHhc--CCCCCE
Confidence            4789999999 9999999998888999 89999988776554322 2 21 1  2355443 2333333332  236999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.++|
T Consensus       235 vid~~g  240 (343)
T 2dq4_A          235 LLEFSG  240 (343)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999998

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.10  E-value=0.0016  Score=58.40  Aligned_cols=80  Identities=20%  Similarity=0.325  Sum_probs=55.0

Q ss_pred             CCCEEEEeC-CCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITG-GASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|.++||.| |+|++|...+..+...|++|+++++++++.+.+. +++....   .|-.+.+-.++ +.++... ..+|+
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~---~~~~~~~~~~~-v~~~t~~-~g~d~  243 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHV---CNAASPTFMQD-LTEALVS-TGATI  243 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCE---EETTSTTHHHH-HHHHHHH-HCCCE
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEE---EeCCChHHHHH-HHHHhcC-CCceE
Confidence            467899997 9999999999888889999999998887766554 4554322   24444332222 2222221 16999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.++|.
T Consensus       244 v~d~~g~  250 (379)
T 3iup_A          244 AFDATGG  250 (379)
T ss_dssp             EEESCEE
T ss_pred             EEECCCc
Confidence            9999984

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.10  E-value=0.00098  Score=59.32  Aligned_cols=74  Identities=23%  Similarity=0.282  Sum_probs=53.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCH-HHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE-DEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++|||+|+ |++|...+..+...|++|+++++++++.+.+. .++... +  .|..+. +.    .+++.   +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-v--~~~~~~~~~----~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADH-Y--IATLEEGDW----GEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSE-E--EEGGGTSCH----HHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCE-E--EcCcCchHH----HHHhh---cCCCE
Confidence            4789999999 99999999988889999999999888776554 455432 2  243332 21    22222   47999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.++|.
T Consensus       247 vid~~g~  253 (360)
T 1piw_A          247 IVVCASS  253 (360)
T ss_dssp             EEECCSC
T ss_pred             EEECCCC
Confidence            9999984

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.07  E-value=0.00085  Score=58.71  Aligned_cols=73  Identities=25%  Similarity=0.422  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|+||+|++|...+..+...|++|+.+++++ + .+..++++... .  .|..+.+.+.+.+       .++|++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~lGa~~-~--i~~~~~~~~~~~~-------~g~D~v  219 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKALGAEQ-C--INYHEEDFLLAIS-------TPVDAV  219 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHHTCSE-E--EETTTSCHHHHCC-------SCEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHcCCCE-E--EeCCCcchhhhhc-------cCCCEE
Confidence            578999999999999999999999999999887543 3 44555666442 2  3544443222212       479999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.++|
T Consensus       220 ~d~~g  224 (321)
T 3tqh_A          220 IDLVG  224 (321)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99988

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.07  E-value=0.0018  Score=57.58  Aligned_cols=82  Identities=18%  Similarity=0.152  Sum_probs=52.1

Q ss_pred             CC-CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH---HHHHHHHhCCCeEEEEecCCCH--HHHHHHHHHHHH-H
Q 044670            2 EG-KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSE--DEITNLVDTAVA-K   74 (302)
Q Consensus         2 ~g-k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~--~~v~~~~~~~~~-~   74 (302)
                      .| ++|||+||+|++|...+..+...|++|+++.++.++   ..+..+.++... ++  |-.+.  +++.+.+.++.. .
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~-vi--~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VI--TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EE--EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeE-EE--ecCccchHHHHHHHHHHhhcc
Confidence            36 899999999999999888888899999999876654   123335565432 22  22110  122222222220 1


Q ss_pred             cCCccEEEEccc
Q 044670           75 YGKLDIMYNNAG   86 (302)
Q Consensus        75 ~~~id~lv~~Ag   86 (302)
                      .+++|++|.++|
T Consensus       243 ~~g~Dvvid~~G  254 (364)
T 1gu7_A          243 GGEAKLALNCVG  254 (364)
T ss_dssp             TCCEEEEEESSC
T ss_pred             CCCceEEEECCC
Confidence            236999999988

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.05  E-value=0.0028  Score=56.87  Aligned_cols=78  Identities=19%  Similarity=0.255  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCC--CHHHHHHHHHHHHHHcC--
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVT--SEDEITNLVDTAVAKYG--   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~~~--   76 (302)
                      .|++|||+| +|++|...+..+...| ++|+++++++++.+.+. .++.. .++  |..  +.+++   .+++.+..+  
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~-~vi--~~~~~~~~~~---~~~v~~~~~g~  266 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGAD-LTL--NRRETSVEER---RKAIMDITHGR  266 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCS-EEE--ETTTSCHHHH---HHHHHHHTTTS
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCc-EEE--eccccCcchH---HHHHHHHhCCC
Confidence            478999999 8999999999888899 59999999887766554 55543 222  433  23343   333433332  


Q ss_pred             CccEEEEcccC
Q 044670           77 KLDIMYNNAGI   87 (302)
Q Consensus        77 ~id~lv~~Ag~   87 (302)
                      ++|++|.++|.
T Consensus       267 g~Dvvid~~g~  277 (380)
T 1vj0_A          267 GADFILEATGD  277 (380)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCcEEEECCCC
Confidence            59999999983

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.02  E-value=0.0019  Score=57.77  Aligned_cols=78  Identities=15%  Similarity=0.298  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++.. .+  .|..+ .+++.+.+.++..  +++|
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~-~v--i~~~~~~~~~~~~~~~~~~--~g~D  263 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGAT-EC--VNPQDYKKPIQEVLTEMSN--GGVD  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCS-EE--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCc-eE--ecccccchhHHHHHHHHhC--CCCc
Confidence            4789999995 9999999998888999 799999988877655 455543 22  24432 1223333333322  3799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       264 ~vid~~g  270 (374)
T 2jhf_A          264 FSFEVIG  270 (374)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.01  E-value=0.0067  Score=53.17  Aligned_cols=111  Identities=14%  Similarity=0.088  Sum_probs=71.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +.+++.|+|+ |.+|..++..|+..|.  .|++.++++++.+.....+.       ..+.....|   .+    .++   
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----a~~---   72 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----DCK---   72 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----GGT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----HhC---
Confidence            3568999996 9999999999999997  89999998877665322221       233433322   11    122   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                          ..|++|..||....   +  ..+.   .+.++.|..-...+.+.+.++   .+.+.++++|-
T Consensus        73 ----~aDvVvi~ag~p~k---p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtN  123 (326)
T 3pqe_A           73 ----DADIVCICAGANQK---P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATN  123 (326)
T ss_dssp             ----TCSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSS
T ss_pred             ----CCCEEEEecccCCC---C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCC
Confidence                68999999996431   1  2333   456777776666666666654   23566666663

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.99  E-value=0.0013  Score=58.22  Aligned_cols=69  Identities=22%  Similarity=0.310  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|||+|+ |+||...+..+...|++|+++++++++.+.+ ++++....+     ++++.+.+          ++|++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~-----~~~~~~~~----------~~D~v  238 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHFY-----TDPKQCKE----------ELDFI  238 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEEE-----SSGGGCCS----------CEEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCeec-----CCHHHHhc----------CCCEE
Confidence            5889999997 9999999988888999999999988887655 446544322     34433211          69999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |.++|.
T Consensus       239 id~~g~  244 (348)
T 3two_A          239 ISTIPT  244 (348)
T ss_dssp             EECCCS
T ss_pred             EECCCc
Confidence            999984

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.99  E-value=0.0025  Score=57.01  Aligned_cols=78  Identities=18%  Similarity=0.266  Sum_probs=53.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |+||...+..+...|+ +|+++++++++.+.+ ++++... +  .|..+ .+++.+.+.++..  +.+|
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~v~~~~~--~g~D  267 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATD-C--LNPRELDKPVQDVITELTA--GGVD  267 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHHT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCcE-E--EccccccchHHHHHHHHhC--CCcc
Confidence            4789999996 9999999988888999 799999888877655 4555432 2  24432 1223333333322  4799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       268 vvid~~G  274 (376)
T 1e3i_A          268 YSLDCAG  274 (376)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.98  E-value=0.0074  Score=51.53  Aligned_cols=162  Identities=14%  Similarity=0.067  Sum_probs=92.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHH-cCCEEE-EEecCccHH--H-----------------HHHHHhCCCeEEEEecCCCHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHE-NGAKVV-IADVQDNLG--Q-----------------ALACKLGEDVCYIHCDVTSED   62 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~-~G~~V~-~~~r~~~~~--~-----------------~~~~~~~~~~~~~~~Dl~~~~   62 (302)
                      .+|.|+|++|.+|+.+++.+.+ .|++++ +++++.+..  .                 .+.+.+ ..+. +..|++.++
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l-~~~D-vVIDft~p~   83 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVK-DDFD-VFIDFTRPE   83 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTT-TSCS-EEEECSCHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHh-cCCC-EEEEcCChH
Confidence            4799999999999999999885 577776 445543220  0                 011111 1223 345999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHH----------------HHhhHHHHHHHHHHHhhc
Q 044670           63 EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLA----------------VNTTGGFLGAKHAARVMI  126 (302)
Q Consensus        63 ~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~----------------~n~~~~~~l~~~~~~~l~  126 (302)
                      ...+.+....+.  ++++++-+.|.           +.++.+++.+                +|+  .+.+++.+.+.+.
T Consensus        84 ~~~~~~~~a~~~--G~~vVigTtG~-----------~~e~~~~L~~~a~~~~vv~a~N~siGvn~--~~~l~~~aa~~~~  148 (273)
T 1dih_A           84 GTLNHLAFCRQH--GKGMVIGTTGF-----------DEAGKQAIRDAAADIAIVFAANFSVGVNV--MLKLLEKAAKVMG  148 (273)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCC-----------CHHHHHHHHHHTTTSCEEECSCCCHHHHH--HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhC--CCCEEEECCCC-----------CHHHHHHHHHhcCCCCEEEEecCcHHHHH--HHHHHHHHHHhcC
Confidence            988888877776  67777766663           2222222222                121  2334444444442


Q ss_pred             cCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHH---------------CCCCcEEEEEeCCcccCC
Q 044670          127 PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL---------------RQYGLRVNCVSPYGLVSG  187 (302)
Q Consensus       127 ~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~---------------~~~gi~v~~v~PG~v~t~  187 (302)
                      ..  -.|=.+=   ......--++|+.++...+.+.+.+...+               .+.+|.+.+++-|.+.+.
T Consensus       149 ~~--~dieiiE---~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~  219 (273)
T 1dih_A          149 DY--TDIEIIE---AHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGE  219 (273)
T ss_dssp             TT--SEEEEEE---EECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEE
T ss_pred             CC--CCEEEEE---eecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCcc
Confidence            10  0111111   11122223568999977777766554321               135799999997777654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.96  E-value=0.0021  Score=57.41  Aligned_cols=78  Identities=18%  Similarity=0.289  Sum_probs=53.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+. .++... +  .|..+ .+++.+.+.++..  +.+|
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~-v--i~~~~~~~~~~~~v~~~~~--~g~D  262 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATE-C--INPQDFSKPIQEVLIEMTD--GGVD  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCce-E--eccccccccHHHHHHHHhC--CCCC
Confidence            4789999996 9999999988888999 7999998888776553 555432 2  24332 1223333333222  3799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       263 ~vid~~g  269 (373)
T 2fzw_A          263 YSFECIG  269 (373)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.95  E-value=0.0012  Score=59.17  Aligned_cols=78  Identities=21%  Similarity=0.332  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |+||...+..+...|+ +|+++++++++.+. .++++... +  .|..+ .+++.+.+.++..  +++|
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~-a~~lGa~~-v--i~~~~~~~~~~~~i~~~~~--gg~D  265 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYET-AKKFGVNE-F--VNPKDHDKPIQEVIVDLTD--GGVD  265 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHH-HHTTTCCE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH-HHHcCCcE-E--EccccCchhHHHHHHHhcC--CCCC
Confidence            4789999998 9999999988888999 79999988887764 45555432 2  24332 2233333333322  3799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       266 ~vid~~g  272 (378)
T 3uko_A          266 YSFECIG  272 (378)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999998

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.94  E-value=0.0058  Score=52.62  Aligned_cols=85  Identities=15%  Similarity=0.243  Sum_probs=56.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc------------------cHHHHHHHH---hC--CCeEEEEe
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQD------------------NLGQALACK---LG--EDVCYIHC   56 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~------------------~~~~~~~~~---~~--~~~~~~~~   56 (302)
                      |++++|+|.|+ ||+|.++++.|++.|. ++.+++.+.                  .+.+.+.+.   ++  .+++.+..
T Consensus        34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~  112 (292)
T 3h8v_A           34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY  112 (292)
T ss_dssp             GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred             HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence            35678999987 8999999999999994 688887654                  444444333   33  34556666


Q ss_pred             cCCCHHHHHHHHHHHHHH----cCCccEEEEccc
Q 044670           57 DVTSEDEITNLVDTAVAK----YGKLDIMYNNAG   86 (302)
Q Consensus        57 Dl~~~~~v~~~~~~~~~~----~~~id~lv~~Ag   86 (302)
                      ++++.+.++.+++.+...    ....|+||.+..
T Consensus       113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            777767766666543221    126788886543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.93  E-value=0.0063  Score=53.30  Aligned_cols=110  Identities=15%  Similarity=0.126  Sum_probs=62.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++++|.|+|+ |.+|.+++..|+..|.  .+++.++++++++.....+.      ..+.....|   .++    +     
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~~a----~-----   74 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---YSD----A-----   74 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---GGG----G-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---HHH----h-----
Confidence            5678999997 9999999999999987  89999998877664433331      122333221   111    2     


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                        ...|++|+.||....   |     -+.-.+.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        75 --~~aDiVvi~ag~~~k---p-----G~tR~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvt  125 (326)
T 3vku_A           75 --KDADLVVITAGAPQK---P-----GETRLDLVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             --TTCSEEEECCCCC------------------------CHHHHHHHHHTT---TCCSEEEECS
T ss_pred             --cCCCEEEECCCCCCC---C-----CchHHHHHHHHHHHHHHHHHHHHhc---CCceEEEEcc
Confidence              268999999996331   1     1223456677765555555555443   2356666665

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.93  E-value=0.0035  Score=56.66  Aligned_cols=46  Identities=20%  Similarity=0.221  Sum_probs=39.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE   49 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   49 (302)
                      .+++|+|+|+ |.+|..+++.+...|++|++++++..+.+.+ +.++.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa  216 (401)
T 1x13_A          171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGA  216 (401)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCC
Confidence            5789999997 9999999999999999999999998877665 34443

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.90  E-value=0.0016  Score=58.20  Aligned_cols=76  Identities=28%  Similarity=0.410  Sum_probs=53.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH---H-cC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVA---K-YG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~---~-~~   76 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+ +.+.++...   ..|..+.+-    .+.+.+   . .+
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~---vi~~~~~~~----~~~i~~~~~~~~g  252 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATA---TVDPSAGDV----VEAIAGPVGLVPG  252 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSE---EECTTSSCH----HHHHHSTTSSSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCE---EECCCCcCH----HHHHHhhhhccCC
Confidence            4789999998 9999999988888999 7888888777655 445565432   235554432    233332   1 23


Q ss_pred             CccEEEEccc
Q 044670           77 KLDIMYNNAG   86 (302)
Q Consensus        77 ~id~lv~~Ag   86 (302)
                      ++|++|.++|
T Consensus       253 g~Dvvid~~G  262 (370)
T 4ej6_A          253 GVDVVIECAG  262 (370)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.90  E-value=0.0021  Score=57.07  Aligned_cols=73  Identities=21%  Similarity=0.404  Sum_probs=51.6

Q ss_pred             CCEEEEeCCCChHHHHH-HHHH-HHcCCE-EEEEecCcc---HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            3 GKVAIITGGASGIGAAA-AKLF-HENGAK-VVIADVQDN---LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         3 gk~vlVTGas~gIG~~i-a~~l-~~~G~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +++|+|+|| |++|... +..+ ...|++ |++++++++   +.+.+ ++++.  ..+  |..+.+ +.+ +.++   .+
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa--~~v--~~~~~~-~~~-i~~~---~g  241 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDA--TYV--DSRQTP-VED-VPDV---YE  241 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTC--EEE--ETTTSC-GGG-HHHH---SC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCC--ccc--CCCccC-HHH-HHHh---CC
Confidence            489999999 9999988 7666 578997 999999887   66554 45553  333  555432 223 3333   24


Q ss_pred             CccEEEEccc
Q 044670           77 KLDIMYNNAG   86 (302)
Q Consensus        77 ~id~lv~~Ag   86 (302)
                      ++|++|.++|
T Consensus       242 g~Dvvid~~g  251 (357)
T 2b5w_A          242 QMDFIYEATG  251 (357)
T ss_dssp             CEEEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.86  E-value=0.0063  Score=53.64  Aligned_cols=76  Identities=14%  Similarity=0.196  Sum_probs=52.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |++|...+..+...  |++|+++++++++.+.+. .++... +  .|..+.   .+.++++.+ ..++|
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~-v--i~~~~~---~~~~~~~~~-g~g~D  240 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADY-V--SEMKDA---ESLINKLTD-GLGAS  240 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSE-E--ECHHHH---HHHHHHHHT-TCCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCE-E--eccccc---hHHHHHhhc-CCCcc
Confidence            4789999999 99999998888888  999999998877765543 455332 2  232220   122333322 12699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       241 ~vid~~g  247 (344)
T 2h6e_A          241 IAIDLVG  247 (344)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.83  E-value=0.0031  Score=56.34  Aligned_cols=78  Identities=18%  Similarity=0.258  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|++|||+|+ |+||...+..+...|+ +|+++++++++.+.+ ++++... +  .|..+ .+++.+.+.++..  +.+|
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~~~~~~i~~~t~--gg~D  263 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE-C--LNPKDYDKPIYEVICEKTN--GGVD  263 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE-E--ECGGGCSSCHHHHHHHHTT--SCBS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcE-E--EecccccchHHHHHHHHhC--CCCC
Confidence            4789999996 9999999888888998 799999888877654 4555432 2  24332 1223222332221  4799


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       264 vvid~~g  270 (373)
T 1p0f_A          264 YAVECAG  270 (373)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999988

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.83  E-value=0.0023  Score=58.12  Aligned_cols=72  Identities=21%  Similarity=0.246  Sum_probs=54.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~id~lv   82 (302)
                      ..|+|.|. |-+|..+++.|.++|+.|++++++++..+.+..   ..+.++.+|.++++.++++ ++       +.|+||
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~---~g~~vi~GDat~~~~L~~agi~-------~A~~vi   73 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK---FGMKVFYGDATRMDLLESAGAA-------KAEVLI   73 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH---TTCCCEESCTTCHHHHHHTTTT-------TCSEEE
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh---CCCeEEEcCCCCHHHHHhcCCC-------ccCEEE
Confidence            45889987 889999999999999999999999988776654   2345677888888765544 22       566666


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      .+.+
T Consensus        74 v~~~   77 (413)
T 3l9w_A           74 NAID   77 (413)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            6543

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.80  E-value=0.0038  Score=56.43  Aligned_cols=76  Identities=26%  Similarity=0.409  Sum_probs=53.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~i   78 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++... +  .|-.+.+-    .+++.+..+  ++
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~-v--i~~~~~~~----~~~i~~~t~g~g~  283 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADH-V--IDPTKENF----VEAVLDYTNGLGA  283 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSE-E--ECTTTSCH----HHHHHHHTTTCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCE-E--EcCCCCCH----HHHHHHHhCCCCC
Confidence            4789999998 9999999888888999 899988887766544 5565432 2  24444332    333333332  59


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |++|.++|
T Consensus       284 D~vid~~g  291 (404)
T 3ip1_A          284 KLFLEATG  291 (404)
T ss_dssp             SEEEECSS
T ss_pred             CEEEECCC
Confidence            99999998

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.79  E-value=0.021  Score=49.97  Aligned_cols=113  Identities=15%  Similarity=0.197  Sum_probs=69.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+.....+       +....+...  +|.+    .++   
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----a~~---   74 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----AIE---   74 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----GGT---
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----HHC---
Confidence            46678999998 9999999999999998 9999999988764322211       112222211  1222    132   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                          .-|++|..+|....   +  ..   .-.+.+..|..-...+.+.+.++   .+.+.++++|-
T Consensus        75 ----~aDiVIiaag~p~k---~--G~---~R~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtN  125 (324)
T 3gvi_A           75 ----GADVVIVTAGVPRK---P--GM---SRDDLLGINLKVMEQVGAGIKKY---APEAFVICITN  125 (324)
T ss_dssp             ----TCSEEEECCSCCCC-------------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCS
T ss_pred             ----CCCEEEEccCcCCC---C--CC---CHHHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCC
Confidence                67999999986432   1  11   22345666766555555555554   23566666663

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.78  E-value=0.00069  Score=58.06  Aligned_cols=70  Identities=21%  Similarity=0.324  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++++|.|+ |++|+++++.|.+.|++|++.+|+.++.+.+.+.++  +..  .+  +.   .+.++       ..|+|
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g--~~~--~~--~~---~~~~~-------~aDiV  190 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFP--LEV--VN--SP---EEVID-------KVQVI  190 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSC--EEE--CS--CG---GGTGG-------GCSEE
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcC--Cee--eh--hH---Hhhhc-------CCCEE
Confidence            5789999996 899999999999999999999999887776654432  221  11  21   11222       67999


Q ss_pred             EEcccCC
Q 044670           82 YNNAGIV   88 (302)
Q Consensus        82 v~~Ag~~   88 (302)
                      |++....
T Consensus       191 i~atp~~  197 (275)
T 2hk9_A          191 VNTTSVG  197 (275)
T ss_dssp             EECSSTT
T ss_pred             EEeCCCC
Confidence            9988753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.76  E-value=0.0007  Score=57.29  Aligned_cols=68  Identities=15%  Similarity=0.311  Sum_probs=49.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +| +++|.|+ ||.|++++..|++.|+ +|++..|+.++.+++.+.+    ...  +.   +++.+.++       ..|+
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~----~~~--~~---~~~~~~~~-------~aDi  169 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV----KIF--SL---DQLDEVVK-------KAKS  169 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC----EEE--EG---GGHHHHHH-------TCSE
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc----ccC--CH---HHHHhhhc-------CCCE
Confidence            56 7899987 9999999999999998 8999999988766654322    222  22   22333333       6899


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |||+...
T Consensus       170 VInatp~  176 (253)
T 3u62_A          170 LFNTTSV  176 (253)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9997754

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.75  E-value=0.0043  Score=53.75  Aligned_cols=70  Identities=21%  Similarity=0.306  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|++++|.|+ |.||+++++.|...|++|++.+|+.++.+.+.+ .+  ...+  +.   +++++++       ...|+
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-~g--~~~~--~~---~~l~~~l-------~~aDv  218 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE-MG--LVPF--HT---DELKEHV-------KDIDI  218 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TT--CEEE--EG---GGHHHHS-------TTCSE
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-CC--CeEE--ch---hhHHHHh-------hCCCE
Confidence            47899999996 999999999999999999999998876554433 32  2222  11   2233333       26899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      |+++..
T Consensus       219 Vi~~~p  224 (300)
T 2rir_A          219 CINTIP  224 (300)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999876

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.74  E-value=0.0067  Score=50.91  Aligned_cols=76  Identities=9%  Similarity=0.085  Sum_probs=56.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +|.|.|++|.+|+.+++.+.+. |+.++.+....+..+++.. .  ... +..|+++++.+.+.+....+.  ++++|+-
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~--~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~Vig   75 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-G--NTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVVG   75 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-T--TCC-EEEECSCTTTHHHHHHHHHHT--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-c--CCc-EEEEccChHHHHHHHHHHHHc--CCCEEEc
Confidence            6899999999999999999875 8998765443333333332 1  223 567999999998888877665  6888888


Q ss_pred             ccc
Q 044670           84 NAG   86 (302)
Q Consensus        84 ~Ag   86 (302)
                      ..|
T Consensus        76 TTG   78 (245)
T 1p9l_A           76 TTG   78 (245)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            776

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.71  E-value=0.025  Score=49.46  Aligned_cols=112  Identities=16%  Similarity=0.179  Sum_probs=71.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+.....+.       ....+...  .|.+    .++   
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----a~~---   72 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----DLE---   72 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGT---
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----HHC---
Confidence            56678999995 9999999999999988 99999999887654332221       12222211  1222    133   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                          ..|++|..+|....   +  ..+.   .+.+..|..-...+.+.+.++-   +.+.++++|
T Consensus        73 ----~aDvVIi~ag~p~k---~--G~~R---~dl~~~N~~i~~~i~~~i~~~~---p~a~vivvt  122 (321)
T 3p7m_A           73 ----NSDVVIVTAGVPRK---P--GMSR---DDLLGINIKVMQTVGEGIKHNC---PNAFVICIT  122 (321)
T ss_dssp             ----TCSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHHC---TTCEEEECC
T ss_pred             ----CCCEEEEcCCcCCC---C--CCCH---HHHHHHhHHHHHHHHHHHHHHC---CCcEEEEec
Confidence                68999999986432   1  2333   3456677666666666666652   356666665

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=96.71  E-value=0.0017  Score=56.76  Aligned_cols=73  Identities=21%  Similarity=0.313  Sum_probs=50.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      |+ +||+||+|++|...+..+...|++|+++++++++.+.+. +++....+   |-.+.+.    ++++  ..+++|++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi---~~~~~~~----~~~~--~~~~~d~v~  216 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRIL---SRDEFAE----SRPL--EKQLWAGAI  216 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEE---EGGGSSC----CCSS--CCCCEEEEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEE---ecCCHHH----HHhh--cCCCccEEE
Confidence            45 999999999999999999999999999999888776554 45543322   2222111    1111  113689999


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      .++|
T Consensus       217 d~~g  220 (324)
T 3nx4_A          217 DTVG  220 (324)
T ss_dssp             ESSC
T ss_pred             ECCC
Confidence            8877

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.70  E-value=0.0061  Score=54.74  Aligned_cols=46  Identities=22%  Similarity=0.231  Sum_probs=39.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE   49 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~   49 (302)
                      .+++++|+|+ |.+|+.+++.+...|++|++++|+..+.+...+ ++.
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~-~Ga  216 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES-LGG  216 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH-TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC
Confidence            5889999996 899999999999999999999999887766544 543

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.66  E-value=0.0017  Score=55.72  Aligned_cols=68  Identities=16%  Similarity=0.245  Sum_probs=51.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++|+++|.|+ ||.|++++..|.+.|+ +|+++.|+.++++++.+.+    ..+.     .++       +.+ . ..|
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~----~~~~-----~~~-------l~~-l-~~D  180 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF----KVIS-----YDE-------LSN-L-KGD  180 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS----EEEE-----HHH-------HTT-C-CCS
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc----Cccc-----HHH-------HHh-c-cCC
Confidence            36899999997 7999999999999998 8999999998877765432    2221     122       112 2 679


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +|||+...
T Consensus       181 ivInaTp~  188 (282)
T 3fbt_A          181 VIINCTPK  188 (282)
T ss_dssp             EEEECSST
T ss_pred             EEEECCcc
Confidence            99998854

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.64  E-value=0.0034  Score=55.44  Aligned_cols=115  Identities=13%  Similarity=0.095  Sum_probs=66.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-------EEEEEecCccH--HHHHHH---Hh--CCCeEEEEecCCCHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-------KVVIADVQDNL--GQALAC---KL--GEDVCYIHCDVTSEDEITN   66 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-------~V~~~~r~~~~--~~~~~~---~~--~~~~~~~~~Dl~~~~~v~~   66 (302)
                      |+.-+|.|+||+|+||..++..|+....       .+.+.+..+..  ++...-   ..  ......+..  ++..   +
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~---~   96 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR---V   96 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH---H
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH---H
Confidence            3455899999999999999999987543       68888876542  222221   11  111222222  2221   2


Q ss_pred             HHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           67 LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        67 ~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      .++       ..|++|-.||....   |  ..+.   ++.++.|..=.-.+.+.+.++-  .+...|+.+|
T Consensus        97 a~~-------~advVvi~aG~prk---p--GmtR---~DLl~~Na~I~~~~~~~i~~~a--~~~~~vlvvs  150 (345)
T 4h7p_A           97 AFD-------GVAIAIMCGAFPRK---A--GMER---KDLLEMNARIFKEQGEAIAAVA--ASDCRVVVVG  150 (345)
T ss_dssp             HTT-------TCSEEEECCCCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECS
T ss_pred             HhC-------CCCEEEECCCCCCC---C--CCCH---HHHHHHhHHHHHHHHHHHHhhc--cCceEEEEeC
Confidence            233       78999999997542   2  3444   4567778655444455444432  1233455554

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.62  E-value=0.02  Score=51.06  Aligned_cols=82  Identities=21%  Similarity=0.233  Sum_probs=56.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecC-----------CCHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDV-----------TSEDEITNLVDT   70 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-----------~~~~~v~~~~~~   70 (302)
                      .+++|+|+|+ |.+|..+++.+...|++|++.+|+..+.+.+.+ ++.  .++..|.           ...+....-.+.
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lGa--~~~~l~~~~~~~~gya~~~~~~~~~~~~~~  258 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VGA--QWLDLGIDAAGEGGYARELSEAERAQQQQA  258 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TTC--EECCCC-------------CHHHHHHHHHH
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCC--eEEeccccccccccchhhhhHHHHhhhHHH
Confidence            5789999999 899999999999999999999999988777654 433  3333221           001112222333


Q ss_pred             HHHHcCCccEEEEcccC
Q 044670           71 AVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~   87 (302)
                      +.+.....|++|.++..
T Consensus       259 l~e~l~~aDIVI~tv~i  275 (381)
T 3p2y_A          259 LEDAITKFDIVITTALV  275 (381)
T ss_dssp             HHHHHTTCSEEEECCCC
T ss_pred             HHHHHhcCCEEEECCCC
Confidence            44444589999998754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.61  E-value=0.0062  Score=52.54  Aligned_cols=70  Identities=20%  Similarity=0.323  Sum_probs=50.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.||+++|.|+ |.||+.+++.|...|++|++.+|+.++.+... ..+.  ..+  +.   +++++++       ...|+
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~--~~~--~~---~~l~~~l-------~~aDv  216 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGM--EPF--HI---SKAAQEL-------RDVDV  216 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTS--EEE--EG---GGHHHHT-------TTCSE
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCC--eec--Ch---hhHHHHh-------cCCCE
Confidence            47899999995 89999999999999999999999877654443 3332  222  21   2233333       26899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      |+++..
T Consensus       217 Vi~~~p  222 (293)
T 3d4o_A          217 CINTIP  222 (293)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999774

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.59  E-value=0.0068  Score=51.08  Aligned_cols=76  Identities=22%  Similarity=0.359  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc-------------------cHHHHHHHHh---CCC--eEEEEe
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQD-------------------NLGQALACKL---GED--VCYIHC   56 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~-------------------~~~~~~~~~~---~~~--~~~~~~   56 (302)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+   +..  +..+..
T Consensus        27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~  105 (251)
T 1zud_1           27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ  105 (251)
T ss_dssp             HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred             hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence            5688999998 7899999999999996 677775532                   4555444433   333  444444


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCccEEEEccc
Q 044670           57 DVTSEDEITNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        57 Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      +++ .+.+.++++       ..|+||.+..
T Consensus       106 ~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          106 RLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             CCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             cCC-HHHHHHHHh-------cCCEEEECCC
Confidence            454 345445444       5799988654

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.56  E-value=0.016  Score=52.16  Aligned_cols=43  Identities=21%  Similarity=0.207  Sum_probs=38.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      .+.+|+|+|+ |.+|..+++.+...|++|++.+++..+.+.+.+
T Consensus       189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            5678999999 899999999999999999999999988776654

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=96.51  E-value=0.0082  Score=53.51  Aligned_cols=76  Identities=16%  Similarity=0.224  Sum_probs=52.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   79 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++... +  .|..+.+-    .+++.+.. +++|
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-v--i~~~~~~~----~~~~~~~~~gg~D  260 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATH-V--INSKTQDP----VAAIKEITDGGVN  260 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSE-E--EETTTSCH----HHHHHHHTTSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCE-E--ecCCccCH----HHHHHHhcCCCCc
Confidence            4789999995 9999999888888999 688998887776554 4555432 2  24443322    22333322 3699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.++|
T Consensus       261 ~vid~~g  267 (371)
T 1f8f_A          261 FALESTG  267 (371)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999988

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.51  E-value=0.032  Score=48.60  Aligned_cols=112  Identities=21%  Similarity=0.250  Sum_probs=69.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC--ccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ--DNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~--~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+.+++.|+|+ |.+|..++..|+..|. .|++.+++  +++.+.....+       +....+...  ++.+        
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~~--------   74 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDYA--------   74 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG--------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCHH--------
Confidence            35678999997 9999999999999999 99999998  44433222111       111111111  1111        


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                         .+...|++|..+|....   |  ..+.   .+.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        75 ---a~~~aDvVIiaag~p~k---p--g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvs  127 (315)
T 3tl2_A           75 ---DTADSDVVVITAGIARK---P--GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLT  127 (315)
T ss_dssp             ---GGTTCSEEEECCSCCCC---T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             ---HhCCCCEEEEeCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECC
Confidence               12368999999996432   2  2333   456777776666666666664   2456676666

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.49  E-value=0.0035  Score=55.13  Aligned_cols=70  Identities=13%  Similarity=0.162  Sum_probs=57.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~id~lv   82 (302)
                      +.++|.|+ |.+|+.+++.|.++|+ |++++++++..+ +.+   ....++.+|.+|++.++++ ++       +.|.+|
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~---~~~~~i~gd~~~~~~L~~a~i~-------~a~~vi  182 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR---SGANFVHGDPTRVSDLEKANVR-------GARAVI  182 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH---TTCEEEESCTTSHHHHHHTCST-------TEEEEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh---CCcEEEEeCCCCHHHHHhcChh-------hccEEE
Confidence            47899997 8999999999999999 999999998877 443   4578899999999886654 33       678888


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      ...+
T Consensus       183 ~~~~  186 (336)
T 1lnq_A          183 VDLE  186 (336)
T ss_dssp             ECCS
T ss_pred             EcCC
Confidence            7553

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.49  E-value=0.0077  Score=54.23  Aligned_cols=77  Identities=19%  Similarity=0.237  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++.  ..  .|.++.+.+   .+++.+..  .++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~--i~~~~~~~~---~~~v~~~t~g~g~  255 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF--EI--ADLSLDTPL---HEQIAALLGEPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC--EE--EETTSSSCH---HHHHHHHHSSSCE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC--cE--EccCCcchH---HHHHHHHhCCCCC
Confidence            4789999995 9999988888888998 688888887776654 45654  32  355443322   22333322  269


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|.++|.
T Consensus       256 Dvvid~~G~  264 (398)
T 1kol_A          256 DCAVDAVGF  264 (398)
T ss_dssp             EEEEECCCT
T ss_pred             CEEEECCCC
Confidence            999999985

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.46  E-value=0.0048  Score=52.32  Aligned_cols=68  Identities=24%  Similarity=0.327  Sum_probs=51.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++| +++|.|+ |++|+++++.|.+.|++|.+.+|+.++.+.+.+..+..     .  .+.++   + +       ..|+
T Consensus       115 l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~-----~--~~~~~---~-~-------~~Di  174 (263)
T 2d5c_A          115 LKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR-----A--VPLEK---A-R-------EARL  174 (263)
T ss_dssp             CCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE-----E--CCGGG---G-G-------GCSE
T ss_pred             CCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc-----h--hhHhh---c-c-------CCCE
Confidence            357 8999997 88999999999999999999999988887777766542     1  22221   1 2       6899


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      ||++....
T Consensus       175 vi~~tp~~  182 (263)
T 2d5c_A          175 LVNATRVG  182 (263)
T ss_dssp             EEECSSTT
T ss_pred             EEEccCCC
Confidence            99988753

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.46  E-value=0.0048  Score=56.85  Aligned_cols=74  Identities=16%  Similarity=0.210  Sum_probs=59.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ..+++|.|+ |-+|+++|+.|.++|+.|++++++++..+.+.+.+  .+..+.+|.++++.++++=-      ...|.+|
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~--~~~~i~Gd~~~~~~L~~Agi------~~ad~~i   73 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY--DLRVVNGHASHPDVLHEAGA------QDADMLV   73 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS--SCEEEESCTTCHHHHHHHTT------TTCSEEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc--CcEEEEEcCCCHHHHHhcCC------CcCCEEE
Confidence            457888887 78999999999999999999999999988887665  45778999999988665421      2568777


Q ss_pred             Ecc
Q 044670           83 NNA   85 (302)
Q Consensus        83 ~~A   85 (302)
                      -..
T Consensus        74 a~t   76 (461)
T 4g65_A           74 AVT   76 (461)
T ss_dssp             ECC
T ss_pred             EEc
Confidence            644

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.46  E-value=0.018  Score=49.20  Aligned_cols=82  Identities=12%  Similarity=0.115  Sum_probs=59.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecCccHHHHHHHHhC-------------CCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA---KVVIADVQDNLGQALACKLG-------------EDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~v   64 (302)
                      |+.+++.|.|+ |-+|.++++.|++.|+   +|++.+|++++.+.+.+.++             .++.++..   .++.+
T Consensus         1 M~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~   76 (280)
T 3tri_A            1 MNTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQI   76 (280)
T ss_dssp             -CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGH
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHH
Confidence            45678888988 9999999999999998   89999999988877766432             22333322   45677


Q ss_pred             HHHHHHHHHH-cCCccEEEEccc
Q 044670           65 TNLVDTAVAK-YGKLDIMYNNAG   86 (302)
Q Consensus        65 ~~~~~~~~~~-~~~id~lv~~Ag   86 (302)
                      +++++++... ..+=.++|++++
T Consensus        77 ~~vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           77 KMVCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHHHhhccCCCeEEEEecC
Confidence            7888887765 433237787765

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.43  E-value=0.021  Score=50.02  Aligned_cols=112  Identities=10%  Similarity=0.063  Sum_probs=71.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ..+++.|+|+ |.+|..++..|+..|.  .+++.++++++++.....+.      .....+..  .|.++    ++    
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~----~~----   86 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV----TA----   86 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG----GT----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH----hC----
Confidence            4578999998 9999999999999997  89999998876665433321      11122222  22221    22    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                         ..|++|..||....     ...+.   .+.++.|..-...+.+.+.++   .+.+.++++|-
T Consensus        87 ---~aDiVvi~aG~~~k-----pG~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtN  137 (331)
T 4aj2_A           87 ---NSKLVIITAGARQQ-----EGESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSN  137 (331)
T ss_dssp             ---TEEEEEECCSCCCC-----TTCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             ---CCCEEEEccCCCCC-----CCccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecC
Confidence               68999999996432     12333   356777766555666666664   33566766663

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.41  E-value=0.012  Score=51.91  Aligned_cols=75  Identities=19%  Similarity=0.363  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~i   78 (302)
                      .|++++|+|+ |++|...+..+... |++|+++++++++.+.+ +.++... ++  |-.+ +.    .+++.+..+  ++
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~-~i--~~~~-~~----~~~v~~~t~g~g~  240 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADA-AV--KSGA-GA----ADAIRELTGGQGA  240 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSE-EE--ECST-TH----HHHHHHHHGGGCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCE-EE--cCCC-cH----HHHHHHHhCCCCC
Confidence            4789999998 99999888777667 78999999988776644 4555432 22  3222 22    233333222  69


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |+++.++|
T Consensus       241 d~v~d~~G  248 (345)
T 3jv7_A          241 TAVFDFVG  248 (345)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999998

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.38  E-value=0.0055  Score=55.23  Aligned_cols=79  Identities=20%  Similarity=0.244  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++|||+|+ |++|...+..+...|+ +|+++++++++.+.+ +.++.  ..  .|..+.+.+.+.+.++.. -..+|+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa--~~--i~~~~~~~~~~~~~~~~~-g~g~Dv  257 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAGF--ET--IDLRNSAPLRDQIDQILG-KPEVDC  257 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTTC--EE--EETTSSSCHHHHHHHHHS-SSCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCC--cE--EcCCCcchHHHHHHHHhC-CCCCCE
Confidence            4789999997 9999988888888999 899999988776554 45554  33  355443211111222211 115999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.++|.
T Consensus       258 vid~~g~  264 (398)
T 2dph_A          258 GVDAVGF  264 (398)
T ss_dssp             EEECSCT
T ss_pred             EEECCCC
Confidence            9999984

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.36  E-value=0.0046  Score=54.73  Aligned_cols=77  Identities=14%  Similarity=0.198  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~i   78 (302)
                      .|++|+|+|+ |+||...+..+...|+ +|+++++++++.+ ..++++... +  .|-.+.+    +.+++.+..+  ++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~lGa~~-v--i~~~~~~----~~~~v~~~t~g~g~  236 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD-IALEYGATD-I--INYKNGD----IVEQILKATDGKGV  236 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH-HHHHHTCCE-E--ECGGGSC----HHHHHHHHTTTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHhCCce-E--EcCCCcC----HHHHHHHHcCCCCC
Confidence            4789999985 9999999888888999 7999988777654 445565432 2  2433332    2334444332  59


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|.++|.
T Consensus       237 D~v~d~~g~  245 (352)
T 3fpc_A          237 DKVVIAGGD  245 (352)
T ss_dssp             EEEEECSSC
T ss_pred             CEEEECCCC
Confidence            999998883

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.36  E-value=0.0034  Score=55.74  Aligned_cols=80  Identities=15%  Similarity=0.139  Sum_probs=49.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH---HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL---GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|++|||+||+|++|...+..+...|++|+++.+..+.   ..+..+.++... ++  |-.+. ...+ +.++....+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~-vi--~~~~~-~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEH-VI--TEEEL-RRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSE-EE--EHHHH-HSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcE-EE--ecCcc-hHHH-HHHHHhCCCCc
Confidence            47899999999999999888888899998887765432   223445565432 22  21111 1111 11111112258


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |++|.++|
T Consensus       242 Dvvid~~g  249 (357)
T 1zsy_A          242 RLALNCVG  249 (357)
T ss_dssp             SEEEESSC
T ss_pred             eEEEECCC
Confidence            99999887

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=96.32  E-value=0.37  Score=40.88  Aligned_cols=79  Identities=15%  Similarity=0.182  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEE-EecCcc---------------------HHHHHHHHhCCCeEEEEecC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVI-ADVQDN---------------------LGQALACKLGEDVCYIHCDV   58 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~Dl   58 (302)
                      +-.+|.|+|++|.+|+.+++.+.++ +..++. ++|+.+                     ..+++...  .+   +..|+
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~--~D---VVIDf   80 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE--AD---YLIDF   80 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH--CS---EEEEC
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC--CC---EEEEc
Confidence            3457999999999999999999875 566665 455532                     22333332  22   35699


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcccC
Q 044670           59 TSEDEITNLVDTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        59 ~~~~~v~~~~~~~~~~~~~id~lv~~Ag~   87 (302)
                      +.++.+.+.+..+.++  ++++|+-+.|.
T Consensus        81 T~p~a~~~~~~~al~~--G~~vVigTTG~  107 (272)
T 4f3y_A           81 TLPEGTLVHLDAALRH--DVKLVIGTTGF  107 (272)
T ss_dssp             SCHHHHHHHHHHHHHH--TCEEEECCCCC
T ss_pred             CCHHHHHHHHHHHHHc--CCCEEEECCCC
Confidence            9999998888888776  67888877774

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.29  E-value=0.015  Score=50.00  Aligned_cols=37  Identities=30%  Similarity=0.461  Sum_probs=33.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||+++|.|+++-+|+.++..|+..|++|.++.|..
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            5799999999999999999999999999999987743

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.23  E-value=0.0026  Score=55.37  Aligned_cols=80  Identities=21%  Similarity=0.169  Sum_probs=53.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeE-EEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVC-YIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+++|.|++.-+|+.+++.|+..|++|+++.|+..+.......+....+ ......++++++.+.+.       .-|
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~AD  247 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------DSD  247 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------HCS
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------cCC
Confidence            4789999999988899999999999999999998874322211111111111 11112244566666666       569


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +||...|.
T Consensus       248 IVIsAtg~  255 (320)
T 1edz_A          248 VVITGVPS  255 (320)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998885

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=96.21  E-value=0.028  Score=50.98  Aligned_cols=39  Identities=28%  Similarity=0.510  Sum_probs=34.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG   40 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   40 (302)
                      +.||+++|.|. |.||+.+++.+...|++|+++++++...
T Consensus       245 L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a  283 (464)
T 3n58_A          245 MAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICA  283 (464)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             ccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchh
Confidence            57999999996 6799999999999999999999877544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.18  E-value=0.0096  Score=52.97  Aligned_cols=47  Identities=30%  Similarity=0.421  Sum_probs=41.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      ++||+++|+|. |.+|..+++.|.+.|++|++.+++.+++++..+.++
T Consensus       171 L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          171 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            57999999997 889999999999999999999998887777766654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=96.17  E-value=0.076  Score=46.16  Aligned_cols=108  Identities=20%  Similarity=0.225  Sum_probs=63.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++.|+|+ |.+|..++..|+..|.  .|++.++++++.+.....+       .....+...|  +.++    ++      
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~a----~~------   68 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYGP----TE------   68 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSGG----GT------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHHH----hC------
Confidence            6889997 9999999999999986  8999999987765332221       1223333222  1111    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ..|++|..||....   |  ..   .-.+.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        69 -~aDvVii~ag~~~k---p--G~---~R~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvt  118 (314)
T 3nep_X           69 -DSDVCIITAGLPRS---P--GM---SRDDLLAKNTEIVGGVTEQFVEG---SPDSTIIVVA  118 (314)
T ss_dssp             -TCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHHHTT---CTTCEEEECC
T ss_pred             -CCCEEEECCCCCCC---C--CC---CHHHHHHhhHHHHHHHHHHHHHh---CCCcEEEecC
Confidence             68999999996431   1  12   23456667755444444444442   2355666665

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.14  E-value=0.0073  Score=52.51  Aligned_cols=68  Identities=10%  Similarity=0.133  Sum_probs=47.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|+++||+|| |++|...+..+...|++|+.++ ++++.+.+ ++++.. .++  |  |.   ++    +   .+++|++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa~-~v~--~--d~---~~----v---~~g~Dvv  203 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGVR-HLY--R--EP---SQ----V---TQKYFAI  203 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTEE-EEE--S--SG---GG----C---CSCEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCCC-EEE--c--CH---HH----h---CCCccEE
Confidence            5889999999 9999999988888999999999 66666544 445532 222  3  21   11    1   3479999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      +.++|.
T Consensus       204 ~d~~g~  209 (315)
T 3goh_A          204 FDAVNS  209 (315)
T ss_dssp             ECC---
T ss_pred             EECCCc
Confidence            998883

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.14  E-value=0.045  Score=47.56  Aligned_cols=110  Identities=19%  Similarity=0.222  Sum_probs=68.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc-C--CEEEEEecCccHHHHHHHHh---CCCeEEEEe-cCCCHHHHHHHHHHHHHHcCC
Q 044670            5 VAIITGGASGIGAAAAKLFHEN-G--AKVVIADVQDNLGQALACKL---GEDVCYIHC-DVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~-G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~-Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|.|+||+|.+|..++..|+.+ +  ..+++.++++. .....-.+   ......... .-.+.++    ++       .
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~-~~G~a~Dl~~~~~~~~v~~~~~~~~~~~----~~-------~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGEDATPA----LE-------G   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTT-HHHHHHHHHTSCSSEEEEEECSSCCHHH----HT-------T
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCC-chhHHHHhhCCCCCceEEEecCCCcHHH----hC-------C
Confidence            6889999999999999999876 5  57899998762 22222122   122222211 1012222    33       6


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      .|++|..||....     ...+   -.+.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        70 aDivii~ag~~rk-----pG~~---R~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVARK-----PGMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSCC-----TTCC---HHHHHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCEEEEeCCCCCC-----CCCC---HHHHHHHHHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            8999999996431     1233   3567778877666666666665   2456677665

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.14  E-value=0.11  Score=44.77  Aligned_cols=108  Identities=14%  Similarity=0.082  Sum_probs=65.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHH----HH---hCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALA----CK---LGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~----~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.++++++.+...    ..   ++....+...  +|.++    ++      
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~~------   68 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----LK------   68 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----GT------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----hC------
Confidence            6889999 9999999999999998  8999999987764221    11   1122222221  12222    33      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       .-|++|..||....   +  ..+.   .+.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        69 -~aDiVViaag~~~k---p--G~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvs  118 (294)
T 1oju_A           69 -GSEIIVVTAGLARK---P--GMTR---LDLAHKNAGIIKDIAKKIVEN---APESKILVVT  118 (294)
T ss_dssp             -TCSEEEECCCCCCC---S--SCCH---HHHHHHHHHHHHHHHHHHHTT---STTCEEEECS
T ss_pred             -CCCEEEECCCCCCC---C--CCcH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence             67999999996432   1  2333   345666654444444444332   2345666666

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.14  E-value=0.0056  Score=53.59  Aligned_cols=74  Identities=18%  Similarity=0.277  Sum_probs=50.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ++||+||+|++|...+..+...|++|+++++++++.+.+. .++... .+  |..+.+  .+.+.++.  .+.+|++|++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~-v~--~~~~~~--~~~~~~~~--~~~~d~vid~  224 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASE-VI--SREDVY--DGTLKALS--KQQWQGAVDP  224 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSE-EE--EHHHHC--SSCCCSSC--CCCEEEEEES
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcE-EE--ECCCch--HHHHHHhh--cCCccEEEEC
Confidence            7999999999999999998899999999999887766553 455432 22  321110  00011111  1368999999


Q ss_pred             cc
Q 044670           85 AG   86 (302)
Q Consensus        85 Ag   86 (302)
                      +|
T Consensus       225 ~g  226 (330)
T 1tt7_A          225 VG  226 (330)
T ss_dssp             CC
T ss_pred             Cc
Confidence            88

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=95.99  E-value=0.019  Score=50.42  Aligned_cols=78  Identities=23%  Similarity=0.236  Sum_probs=50.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEE-EEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKV-VIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++++|+|+ |++|...+..+...|+.+ +++++++++. ++.++++.... +  |-.+.+. .+....+.+ ....|+
T Consensus       160 ~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~-~~a~~lGa~~~-i--~~~~~~~-~~~~~~~~~-~~g~d~  232 (346)
T 4a2c_A          160 ENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKL-ALAKSFGAMQT-F--NSSEMSA-PQMQSVLRE-LRFNQL  232 (346)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTTCSEE-E--ETTTSCH-HHHHHHHGG-GCSSEE
T ss_pred             CCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHH-HHHHHcCCeEE-E--eCCCCCH-HHHHHhhcc-cCCccc
Confidence            5789999987 899999998888899876 5566666654 44556664432 2  4333322 222333222 246899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      ++.++|
T Consensus       233 v~d~~G  238 (346)
T 4a2c_A          233 ILETAG  238 (346)
T ss_dssp             EEECSC
T ss_pred             cccccc
Confidence            999887

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.97  E-value=0.0099  Score=50.73  Aligned_cols=37  Identities=32%  Similarity=0.566  Sum_probs=33.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||+++|.|+++-+|+.++..|+.+|++|.++.+..
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            5799999999999999999999999999999987643

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.97  E-value=0.034  Score=48.81  Aligned_cols=34  Identities=15%  Similarity=0.325  Sum_probs=29.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      ++++|+|.|+ ||+|.++++.|+..|. ++++++++
T Consensus        33 ~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           33 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            5788999988 8999999999999995 57777664

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.92  E-value=0.09  Score=45.44  Aligned_cols=108  Identities=18%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCC------CeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGE------DVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|.|+|| |.+|..++..|+..|+  .|++.++++++.+.....+..      ...+..   .+.++    ++      
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~~a----~~------   66 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGHSE----LA------   66 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECGGG----GT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCHHH----hC------
Confidence            36889998 9999999999999998  999999998766544333321      122221   12221    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ..|++|..++....   +  ..+   -.+.+..|..-...+.+.+.++   ...+.++++|
T Consensus        67 -~aDvVIi~~~~~~~---~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~t  116 (304)
T 2v6b_A           67 -DAQVVILTAGANQK---P--GES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTS  116 (304)
T ss_dssp             -TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECS
T ss_pred             -CCCEEEEcCCCCCC---C--CCc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence             68999999985431   1  111   2234566665555556666654   2345555543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=95.92  E-value=0.042  Score=49.67  Aligned_cols=40  Identities=15%  Similarity=0.329  Sum_probs=35.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      +.||+++|.|. |.||+.+++.|...|++|+++++++.+..
T Consensus       218 L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~  257 (435)
T 3gvp_A          218 FGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICAL  257 (435)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             ecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhH
Confidence            47999999998 78999999999999999999998875443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.91  E-value=0.033  Score=47.59  Aligned_cols=42  Identities=17%  Similarity=0.296  Sum_probs=37.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      +++.|.|+||.+|.++++.|++.|++|++.+|+++..+.+.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            479999999999999999999999999999998877766543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.91  E-value=0.088  Score=45.82  Aligned_cols=110  Identities=14%  Similarity=0.159  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +..+|.|+|| |.+|..++..|+.+|  ..|++.++++++.+.....+       +..+.+.. |  +.++    ++   
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~~~a----~~---   73 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--EYSD----CH---   73 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--CGGG----GT---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--CHHH----hC---
Confidence            4568999999 999999999999988  48999998876555322221       12233332 2  2222    33   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                          ..|++|..+|....   +  ..+.+   +.+..|..-...+.+.+.++   ...+.++++|
T Consensus        74 ----~aDvVvi~ag~~~~---~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (317)
T 3d0o_A           74 ----DADLVVICAGAAQK---P--GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVAT  123 (317)
T ss_dssp             ----TCSEEEECCCCCCC---T--TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             ----CCCEEEECCCCCCC---C--CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEec
Confidence                68999999986432   1  23332   44566655545555555554   2356666644

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.87  E-value=0.069  Score=46.30  Aligned_cols=39  Identities=21%  Similarity=0.328  Sum_probs=34.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQAL   43 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~   43 (302)
                      ++|.|+|| |.+|..++..|+..|+ +|++.++++++++..
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~   42 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGK   42 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHH
Confidence            47899999 9999999999999996 899999988776543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.85  E-value=0.15  Score=44.22  Aligned_cols=108  Identities=19%  Similarity=0.185  Sum_probs=69.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|.|+|| |.+|..++..|+..+  ..+++.++++++++.....+.      ..+.+.. |  +.++    ++      
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~a----~~------   66 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYGD----LE------   66 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----GT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHHH----hC------
Confidence            36889998 999999999999987  689999998877665443332      1223332 2  2222    33      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ..|++|..+|....   +  ..+.+   +.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        67 -~aD~Vii~ag~~~~---~--g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  116 (310)
T 2xxj_A           67 -GARAVVLAAGVAQR---P--GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVAT  116 (310)
T ss_dssp             -TEEEEEECCCCCCC---T--TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             -CCCEEEECCCCCCC---C--CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEec
Confidence             68999999986432   2  23433   34666665555555555554   3456777764

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.85  E-value=0.017  Score=49.05  Aligned_cols=36  Identities=8%  Similarity=0.175  Sum_probs=33.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      ++||+++|.|+++-+|+.++..|+.+|++|+++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            579999999999999999999999999999998764

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.81  E-value=0.032  Score=47.02  Aligned_cols=84  Identities=15%  Similarity=0.215  Sum_probs=57.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCC-----------CeEEEEecCCCHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGE-----------DVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~-----------~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      ++++.|.|+ |.+|..+++.|++.|++ |.+.+|++++.+.+.+..+.           ...++.. ...+..+++++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~-av~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIV-SLKDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEE-CCCHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEE-ecCHHHHHHHHHH
Confidence            457889987 99999999999999998 88899998887776655321           1222221 2345566777777


Q ss_pred             HHHHcCCccEEEEcccCC
Q 044670           71 AVAKYGKLDIMYNNAGIV   88 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~   88 (302)
                      +.....+=.++|++.+..
T Consensus        88 l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHTTCCTTCEEEECCTTS
T ss_pred             HHhhcCCCcEEEECCCCC
Confidence            765443335778877643

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.74  E-value=0.031  Score=50.67  Aligned_cols=70  Identities=14%  Similarity=0.195  Sum_probs=53.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++.....   ....  ..+..|..|.+.+.++++       ++|+
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~---~~ad--~~~~~~~~d~~~l~~~a~-------~~D~   99 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG---AVAD--RHLRAAYDDEAALAELAG-------LCEA   99 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH---HHSS--EEECCCTTCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh---hhCC--EEEECCcCCHHHHHHHHh-------cCCE
Confidence            46899999986 679999999999999999998866543221   1112  456689999999888874       5898


Q ss_pred             EEE
Q 044670           81 MYN   83 (302)
Q Consensus        81 lv~   83 (302)
                      ++.
T Consensus       100 V~~  102 (419)
T 4e4t_A          100 VST  102 (419)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=95.73  E-value=0.098  Score=45.30  Aligned_cols=67  Identities=24%  Similarity=0.302  Sum_probs=48.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|+++.|.|. |.||+.+++.|...|++|++.+|+.+. . .....+  +..     .+   ++++++       ..|+
T Consensus       140 l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~-~~~~~g--~~~-----~~---l~ell~-------~aDv  199 (307)
T 1wwk_A          140 LEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-E-RAKEVN--GKF-----VD---LETLLK-------ESDV  199 (307)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-H-HHHHTT--CEE-----CC---HHHHHH-------HCSE
T ss_pred             cCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-h-hHhhcC--ccc-----cC---HHHHHh-------hCCE
Confidence            57899999975 999999999999999999999998876 2 223332  222     13   233444       4699


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      |+.+...
T Consensus       200 V~l~~p~  206 (307)
T 1wwk_A          200 VTIHVPL  206 (307)
T ss_dssp             EEECCCC
T ss_pred             EEEecCC
Confidence            9887754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.70  E-value=0.047  Score=46.67  Aligned_cols=82  Identities=15%  Similarity=0.055  Sum_probs=56.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----------CCCeEEEEecCCCHHHHHHHH---HH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----------GEDVCYIHCDVTSEDEITNLV---DT   70 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~~---~~   70 (302)
                      +++.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.-          -....++..=+.++..+++++   +.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            57888875 99999999999999999999999988766554320          011233334455677777777   66


Q ss_pred             HHHHcCCccEEEEccc
Q 044670           71 AVAKYGKLDIMYNNAG   86 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag   86 (302)
                      +.....+-.++|+..+
T Consensus        81 l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           81 VLEGIGEGRGYVDMST   96 (287)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HhhcCCCCCEEEeCCC
Confidence            6665544456777644

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.69  E-value=0.16  Score=44.28  Aligned_cols=109  Identities=15%  Similarity=0.135  Sum_probs=68.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ..+|.|+|| |.+|..++..|+..+.  .+++.++++++++.....+.      ..+.+.. |  +.++    ++     
T Consensus         9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~~~a----~~-----   75 (326)
T 2zqz_A            9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--EYSD----AK-----   75 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGGG----GG-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--CHHH----hC-----
Confidence            457999999 9999999999998885  79999998877665433331      2233332 2  2222    33     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                        ..|++|..+|....   +  ..+.   .+.+..|..-...+.+.+.++   .+.+.|+++|
T Consensus        76 --~aDvVii~ag~~~k---~--g~~R---~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  125 (326)
T 2zqz_A           76 --DADLVVITAGAPQK---P--GETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             --GCSEEEECCCCC----------CH---HHHHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             --CCCEEEEcCCCCCC---C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeC
Confidence              67999999986431   1  2233   345666666555555555554   3456777764

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.67  E-value=0.056  Score=47.09  Aligned_cols=83  Identities=12%  Similarity=0.134  Sum_probs=57.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----------hCCCeEEEEecCCCHHHHHHHHH--H
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----------LGEDVCYIHCDVTSEDEITNLVD--T   70 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~~~~~--~   70 (302)
                      .++|.|.|. |.+|..+++.|++.|++|++.+|++++.+.+.+.          .-....++..=+.+...++.++.  .
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~  109 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQG  109 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTC
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchh
Confidence            457888865 9999999999999999999999998877665432          00123334444566777777776  5


Q ss_pred             HHHHcCCccEEEEccc
Q 044670           71 AVAKYGKLDIMYNNAG   86 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag   86 (302)
                      +.....+-.++|+...
T Consensus       110 ~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          110 VAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHHCCTTCEEEECSC
T ss_pred             HHhhCCCCCEEEecCC
Confidence            6555544456666554

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=95.66  E-value=0.029  Score=49.31  Aligned_cols=76  Identities=26%  Similarity=0.325  Sum_probs=48.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~i   78 (302)
                      .|++++|+|| |++|...+..+... |++|+++++++++.+. ...++....   .|-.+.+.    .+++.+..+  .+
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~-~~~~Ga~~~---i~~~~~~~----~~~v~~~t~g~g~  233 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNL-AKKIGADVT---INSGDVNP----VDEIKKITGGLGV  233 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHH-HHHTTCSEE---EEC-CCCH----HHHHHHHTTSSCE
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhh-hhhcCCeEE---EeCCCCCH----HHHhhhhcCCCCc
Confidence            4789999987 77777777766654 7899999998877654 445554332   24444443    333333332  47


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |.++.+++
T Consensus       234 d~~~~~~~  241 (348)
T 4eez_A          234 QSAIVCAV  241 (348)
T ss_dssp             EEEEECCS
T ss_pred             eEEEEecc
Confidence            88888776

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=95.66  E-value=0.066  Score=46.66  Aligned_cols=109  Identities=17%  Similarity=0.149  Sum_probs=65.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCC------CeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGE------DVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~------~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ..+|.|+|+ |.+|..++..|+..|.  .|++.+.++++.+.....+..      .+.+. .  .+.+    .+      
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~~----a~------   72 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDYS----DV------   72 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG----GG------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCHH----Hh------
Confidence            356899998 9999999999999987  899999987665543333322      12121 1  1211    12      


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ...|++|..+|....   +  ..+.   .+.+..|..-...+.+.+.++   .+.+.|+++|
T Consensus        73 -~~aDvVii~~g~p~k---~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (318)
T 1y6j_A           73 -KDCDVIVVTAGANRK---P--GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  123 (318)
T ss_dssp             -TTCSEEEECCCC-----------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             -CCCCEEEEcCCCCCC---C--CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEec
Confidence             378999999986331   1  2222   345677776666666666665   2456666643

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.61  E-value=0.072  Score=43.29  Aligned_cols=73  Identities=16%  Similarity=0.214  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.+++.|.| .|.+|.+++..|++.|++|++.+|+++       .. ..++.++.  +. ...++++++++..... -.+
T Consensus        18 ~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~a--v~-~~~~~~v~~~l~~~~~-~~~   85 (209)
T 2raf_A           18 QGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIMA--VP-YPALAALAKQYATQLK-GKI   85 (209)
T ss_dssp             --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEEC--SC-HHHHHHHHHHTHHHHT-TSE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEEc--CC-cHHHHHHHHHHHHhcC-CCE
Confidence            467899999 699999999999999999999999876       11 13333333  33 6777888887765544 245


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +++.+.
T Consensus        86 vi~~~~   91 (209)
T 2raf_A           86 VVDITN   91 (209)
T ss_dssp             EEECCC
T ss_pred             EEEECC
Confidence            666554

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.60  E-value=0.093  Score=45.87  Aligned_cols=110  Identities=11%  Similarity=0.026  Sum_probs=68.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh------CCCeEEE-EecCCCHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL------GEDVCYI-HCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~-~~Dl~~~~~v~~~~~~~~~   73 (302)
                      .+++.|+|+ |.+|..++..|+..|.  .|++.++++++.+.....+      ....... ..|..+       +     
T Consensus        21 ~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~-----   87 (330)
T 3ldh_A           21 YNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------S-----   87 (330)
T ss_dssp             CCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------C-----
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------h-----
Confidence            468999999 9999999999999996  8999999887655432222      1111222 234332       2     


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                        ...|++|..||....   +  ..+.   .+.+..|..-...+.+.+.++   .+.+.++++|-
T Consensus        88 --~daDiVIitaG~p~k---p--G~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtN  139 (330)
T 3ldh_A           88 --AGSKLVVITAGARQQ---E--GESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPE  139 (330)
T ss_dssp             --SSCSEEEECCSCCCC---S--SCCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSS
T ss_pred             --CCCCEEEEeCCCCCC---C--CCCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCC
Confidence              268999999997542   2  1222   234555554444555555554   23566666663

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.57  E-value=0.031  Score=49.91  Aligned_cols=69  Identities=23%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++....   .....  .++..|..|.+.+.++++       .+|+
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~ad--~~~~~~~~d~~~l~~~~~-------~~dv   76 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYVAH--EFIQAKYDDEKALNQLGQ-------KCDV   76 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGGSS--EEEECCTTCHHHHHHHHH-------HCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhhCC--EEEECCCCCHHHHHHHHH-------hCCc
Confidence            35889999986 77999999999999999999987654211   11112  466789999999888776       3687


Q ss_pred             EE
Q 044670           81 MY   82 (302)
Q Consensus        81 lv   82 (302)
                      ++
T Consensus        77 i~   78 (377)
T 3orq_A           77 IT   78 (377)
T ss_dssp             EE
T ss_pred             ce
Confidence            63

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.56  E-value=0.022  Score=48.58  Aligned_cols=37  Identities=22%  Similarity=0.279  Sum_probs=33.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      ++||+++|.|+++-+|+.++..|+..|++|.++.+..
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            5799999999999999999999999999999987543

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=95.56  E-value=0.0028  Score=56.15  Aligned_cols=38  Identities=29%  Similarity=0.564  Sum_probs=33.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++||++.|.| .|.||+++++.|.+.|++|++.+++..+
T Consensus       173 L~GktV~I~G-~GnVG~~~A~~l~~~GakVvvsD~~~~~  210 (355)
T 1c1d_A          173 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTER  210 (355)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence            5799999997 5999999999999999999988877554

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.48  E-value=0.05  Score=46.87  Aligned_cols=78  Identities=14%  Similarity=0.228  Sum_probs=51.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ++|.|.||.|.+|.++++.|.+.|++|++.+|+++. ..+..+  ..++.++.+   -+..+.++++++.....+=.+|+
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~~~~~--~aDvVilav---p~~~~~~vl~~l~~~l~~~~iv~   96 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA--NADVVIVSV---PINLTLETIERLKPYLTENMLLA   96 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT--TCSEEEECS---CGGGHHHHHHHHGGGCCTTSEEE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHHHHhc--CCCEEEEeC---CHHHHHHHHHHHHhhcCCCcEEE
Confidence            568999999999999999999999999999988653 212211  234444443   23346777777654443323555


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      +.++
T Consensus        97 ~~~s  100 (298)
T 2pv7_A           97 DLTS  100 (298)
T ss_dssp             ECCS
T ss_pred             ECCC
Confidence            5554

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.47  E-value=0.025  Score=50.15  Aligned_cols=34  Identities=21%  Similarity=0.485  Sum_probs=29.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus       117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D  151 (353)
T 3h5n_A          117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDND  151 (353)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCC
Confidence            4678999988 8999999999999995 68888765

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.46  E-value=0.15  Score=44.30  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=64.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      .+|.|+|| |.+|..++..|+..+.  .+++.++++++++.....+.      ..+.+.. |  +.++    ++      
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~~~a----~~------   71 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--EYSD----CK------   71 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--CGGG----GT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--CHHH----hC------
Confidence            58999999 9999999999999886  79999998877665333331      2233332 2  2221    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       ..|++|..+|....   +  ..+   -.+.+..|..-...+.+.+.++   ...+.++++|
T Consensus        72 -~aDvVii~ag~~~~---~--g~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  121 (318)
T 1ez4_A           72 -DADLVVITAGAPQK---P--GES---RLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (318)
T ss_dssp             -TCSEEEECCCC------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -CCCEEEECCCCCCC---C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeC
Confidence             68999999986432   1  112   2234555655444455555543   2456777764

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.43  E-value=0.18  Score=44.11  Aligned_cols=38  Identities=24%  Similarity=0.288  Sum_probs=34.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQA   42 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~   42 (302)
                      ++|.|+|| |.+|..++..|+..|+ +|++.++++++++.
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            47999998 9999999999999998 99999999877665

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.36  E-value=0.024  Score=48.38  Aligned_cols=36  Identities=22%  Similarity=0.365  Sum_probs=33.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      ++||+++|.|+++-+|+.++..|+.+|++|+++.|.
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            579999999999999999999999999999988654

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=95.31  E-value=0.23  Score=43.01  Aligned_cols=108  Identities=17%  Similarity=0.161  Sum_probs=68.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc--CCEEEEEecCccHHHHHHHHhC-------CCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHEN--GAKVVIADVQDNLGQALACKLG-------EDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~-------~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++.|+|+ |.+|..++..|+..  |++|++.++++++.+.....+.       ....+...  +|.+.    +       
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~~----l-------   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD----T-------   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHHH----H-------
Confidence            6889998 99999999999985  7999999999887765432221       11121111  22221    2       


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ...|++|.+++....     ...+   ..+.+..|..-...+.+.+.++.   ..+.+++++
T Consensus        68 ~~aDvViiav~~p~~-----~g~~---r~dl~~~n~~i~~~i~~~i~~~~---~~~~viv~t  118 (310)
T 1guz_A           68 ANSDIVIITAGLPRK-----PGMT---REDLLMKNAGIVKEVTDNIMKHS---KNPIIIVVS  118 (310)
T ss_dssp             TTCSEEEECCSCCCC-----TTCC---HHHHHHHHHHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred             CCCCEEEEeCCCCCC-----CCCC---HHHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEc
Confidence            268999999985321     1122   23566677666666666666652   345666664

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=95.31  E-value=0.076  Score=50.09  Aligned_cols=34  Identities=15%  Similarity=0.325  Sum_probs=29.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      ++++|+|.|+ ||+|.++++.|+..|. ++++++.+
T Consensus       325 ~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D  359 (615)
T 4gsl_A          325 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG  359 (615)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            5678999988 8999999999999995 67887764

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.26  E-value=0.074  Score=46.99  Aligned_cols=70  Identities=20%  Similarity=0.289  Sum_probs=49.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.||++.|.|. |.||+.+++.|...|++|+..+|+....+... ..+  +..    ..+   ++++++       ..|+
T Consensus       162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g--~~~----~~~---l~ell~-------~aDv  223 (351)
T 3jtm_A          162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETG--AKF----VED---LNEMLP-------KCDV  223 (351)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHC--CEE----CSC---HHHHGG-------GCSE
T ss_pred             ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCC--CeE----cCC---HHHHHh-------cCCE
Confidence            57999999986 88999999999999999999998864443332 222  121    122   333444       5799


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      |+.+....
T Consensus       224 V~l~~Plt  231 (351)
T 3jtm_A          224 IVINMPLT  231 (351)
T ss_dssp             EEECSCCC
T ss_pred             EEECCCCC
Confidence            99877643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=95.26  E-value=0.01  Score=58.51  Aligned_cols=76  Identities=24%  Similarity=0.338  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~id   79 (302)
                      .|++|||.||+|++|...+......|++|+.+++++ +.+.+.  ++... +  .|-.+.+    +.+++.+..+  .+|
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~--lga~~-v--~~~~~~~----~~~~i~~~t~g~GvD  414 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE--LSREH-L--ASSRTCD----FEQQFLGATGGRGVD  414 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC--SCGGG-E--ECSSSST----HHHHHHHHSCSSCCS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh--cChhh-e--eecCChh----HHHHHHHHcCCCCeE
Confidence            578999999999999999988888999999998665 322211  33221 1  2333332    2334444332  599


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +++++.|.
T Consensus       415 vVld~~gg  422 (795)
T 3slk_A          415 VVLNSLAG  422 (795)
T ss_dssp             EEEECCCT
T ss_pred             EEEECCCc
Confidence            99998764

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=95.25  E-value=0.043  Score=51.67  Aligned_cols=33  Identities=15%  Similarity=0.345  Sum_probs=28.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEec
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADV   35 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r   35 (302)
                      ++++|+|.|+ ||+|.++++.|+..|. ++.+++.
T Consensus       326 ~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~  359 (598)
T 3vh1_A          326 KNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDN  359 (598)
T ss_dssp             HTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECC
Confidence            4678999987 8999999999999996 6778754

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.25  E-value=0.05  Score=46.81  Aligned_cols=81  Identities=16%  Similarity=0.136  Sum_probs=58.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----------hCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----------LGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----------~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +++.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+.          .-. ..++..=+.+...++++++.+..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            4677887 58999999999999999999999998876655432          112 34455556677788888877776


Q ss_pred             HcCCccEEEEccc
Q 044670           74 KYGKLDIMYNNAG   86 (302)
Q Consensus        74 ~~~~id~lv~~Ag   86 (302)
                      ...+-.++|+...
T Consensus        94 ~l~~g~ivv~~st  106 (296)
T 3qha_A           94 HAKPGTVIAIHST  106 (296)
T ss_dssp             TCCTTCEEEECSC
T ss_pred             hcCCCCEEEEeCC
Confidence            5544466777654

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=95.19  E-value=0.038  Score=48.68  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=46.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|++|+|+||+|++|...+......| .+|+.+++ +++.+.+.  ++.. .++  | .+.+- .+.+.++.  -+.+|+
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~-~~~~~~~~--~ga~-~~~--~-~~~~~-~~~~~~~~--~~g~Dv  211 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS-TFKHEAIK--DSVT-HLF--D-RNADY-VQEVKRIS--AEGVDI  211 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEEC-GGGHHHHG--GGSS-EEE--E-TTSCH-HHHHHHHC--TTCEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCC-HHHHHHHH--cCCc-EEE--c-CCccH-HHHHHHhc--CCCceE
Confidence            47899999999999998777665564 67877763 44444333  4432 222  3 33222 22222221  236999


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.+.|
T Consensus       212 v~d~~g  217 (349)
T 4a27_A          212 VLDCLC  217 (349)
T ss_dssp             EEEECC
T ss_pred             EEECCC
Confidence            999988

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=95.18  E-value=0.059  Score=48.20  Aligned_cols=69  Identities=25%  Similarity=0.273  Sum_probs=50.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.||+++|.|+ |.+|+.+++++.+.|++|++++.+.....   ...  .-..+..|..|.+.+.++++       ..|+
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~---~~~--ad~~~~~~~~d~~~l~~~~~-------~~dv   78 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPC---AQV--ADIEIVASYDDLKAIQHLAE-------ISDV   78 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTT---TTT--CSEEEECCTTCHHHHHHHHH-------TCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCch---HHh--CCceEecCcCCHHHHHHHHH-------hCCE
Confidence            46899999987 45999999999999999999987643211   011  11345678999998887776       5787


Q ss_pred             EE
Q 044670           81 MY   82 (302)
Q Consensus        81 lv   82 (302)
                      +.
T Consensus        79 I~   80 (389)
T 3q2o_A           79 VT   80 (389)
T ss_dssp             EE
T ss_pred             ee
Confidence            63

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	302
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	5e-65
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	7e-65
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-64
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-59
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	7e-59
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-58
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	1e-57
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	3e-57
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	2e-56
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	1e-55
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-55
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	3e-55
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	3e-55
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	1e-54
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	3e-54
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-53
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	4e-53
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-53
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-52
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-52
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-52
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	7e-52
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	5e-51
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-50
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-50
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	6e-50
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-49
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	2e-49
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-49
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-49
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	3e-49
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	5e-49
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-49
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	1e-48
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-47
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	2e-47
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	3e-47
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	4e-47
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	7e-47
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-46
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-45
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-44
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-44
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-43
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-42
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-41
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-41
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-40
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	4e-40
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	3e-36
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-35
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-34
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-34
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	6e-34
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	2e-31
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	2e-31
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-30
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	4e-30
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-29
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	2e-28
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-28
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-26
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	2e-22
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	8e-22
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-20
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	8e-16
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	7e-13
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	7e-13
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	5e-07
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	6e-06
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	1e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	5e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-05
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-04
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	1e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	2e-04
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	2e-04
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	5e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	7e-04
d2gv8a1	335	c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox	0.002
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.002
d2iida1	370	c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M	0.002
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	0.003
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	0.003
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	0.003

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  203 bits (517), Expect = 5e-65
 Identities = 121/256 (47%), Positives = 168/256 (65%), Gaps = 4/256 (1%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDV 58
           L+ KVAIITGGA GIG   AKLF   GAKVVIAD+ D+ GQ +   +G    + ++HCDV
Sbjct: 4   LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDV 63

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           T ++++ NLVDT +AK+GKLDIM+ N G++     S+L+    D  RV+ +N  G FL A
Sbjct: 64  TKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVA 123

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPA-YTVSKYGIIALVKILAAELRQYGLRVN 177
           KHAARVMIP  KG I+FTAS  +  AG G    YT +K+ ++ L   L  EL +YG+RVN
Sbjct: 124 KHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVN 183

Query: 178 CVSPYGLVSGI-SSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           CVSPY + S + +    ++ + +E    +  NL+G +L AE +A+A  YLA DE+  V+G
Sbjct: 184 CVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG 243

Query: 237 LNLVVDGGFSVANPSL 252
           LNLV+DGG++  NP+ 
Sbjct: 244 LNLVIDGGYTRTNPAF 259

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  202 bits (515), Expect = 7e-65
 Identities = 79/250 (31%), Positives = 119/250 (47%), Gaps = 7/250 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             GK  ++TGGA GIG A A+ F   GA V + D++   G+ +A  +G    +   D+  
Sbjct: 3   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIG--GAFFQVDLED 59

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E E    V+ A    G++D++ NNA I   G  S L     +  RVL VN T     +  
Sbjct: 60  ERERVRFVEEAAYALGRVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHLSAL 117

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           AAR M     G I+  AS     A   + AY  SK G++ L + LA +L    +RVN V+
Sbjct: 118 AAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 177

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGLN 238
           P  + +             E    +  +L    ++   E +A A L+LA+++AS +TG  
Sbjct: 178 PGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFITGAI 237

Query: 239 LVVDGGFSVA 248
           L VDGG + +
Sbjct: 238 LPVDGGMTAS 247

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  199 bits (508), Expect = 7e-64
 Identities = 74/246 (30%), Positives = 115/246 (46%), Gaps = 5/246 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGEDVCYIHCDVT 59
           L+ K+A+ITGGA+GIG A A+ F   GA + IAD+      +A    LG  V  + CDV+
Sbjct: 3   LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS 62

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
              ++       ++ +G+ DI+ NNAGI         +       +   +N   GFL AK
Sbjct: 63  QPGDVEAFGKQVISTFGRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVDSGFLMAK 120

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
                M     G I+   S    +       Y  +K   I   + LA++L + G+ VN +
Sbjct: 121 AFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAI 180

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P  LV   ++  S   A+ +  L  M     ++     +  AA +LA+D+AS +TG  L
Sbjct: 181 AP-SLVRTATTEASALSAMFDV-LPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 238

Query: 240 VVDGGF 245
            VDGG 
Sbjct: 239 AVDGGM 244

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  189 bits (481), Expect = 1e-59
 Identities = 73/261 (27%), Positives = 114/261 (43%), Gaps = 14/261 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
              KVAIITG ++GIG A A LF   GAKV I        +    ++       ++V  +
Sbjct: 3   FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSV 62

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTT 112
             DVT++     ++ T + K+GKLDI+ NNAG         +         D  L +N  
Sbjct: 63  VADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLR 122

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
                 K A   +       +  ++ A    A    P Y+++K  I    +  A +L Q+
Sbjct: 123 SVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH 182

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLA 227
           G+RVN +SP  + +G  S   +     + F S M  ++     G +   + IA    +LA
Sbjct: 183 GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 242

Query: 228 TDEASD-VTGLNLVVDGGFSV 247
             + S  + G  LVVDGG S+
Sbjct: 243 DRKTSSYIIGHQLVVDGGSSL 263

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  187 bits (475), Expect = 7e-59
 Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 6/249 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKVA++TGGASG+G    KL    GAKV  +D+ +  GQ LA +LGE   ++  DV+S
Sbjct: 4   LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSS 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E + T ++     + G L+++ NNAGI+  G   +      D  R+L +NT   F+G + 
Sbjct: 64  EADWTLVMAAVQRRLGTLNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQ 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ--YGLRVNC 178
               M  +  G I+  AS  + +       Y+ SK  + AL +  A   R+  Y +RVN 
Sbjct: 122 GIAAMK-ETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNS 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLR-GQVLNAEGIANAALYLATDEASDVTGL 237
           + P G+ + +   +       E  L +    R G+    E IA   L+LA+DE+S ++G 
Sbjct: 181 IHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGS 240

Query: 238 NLVVDGGFS 246
            L  D    
Sbjct: 241 ELHADNSIL 249

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  185 bits (472), Expect = 1e-58
 Identities = 74/249 (29%), Positives = 126/249 (50%), Gaps = 6/249 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             GKV ++TGG  GIGA   + F  +GA+VVI D  ++ G+AL  +L     +I CDVT 
Sbjct: 4   YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQ 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           ED++  LV   + ++G+LD + NNAG          +T      ++L +N  G +   K 
Sbjct: 63  EDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKL 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A   +  + +G ++  +S    I    +  Y  +K  + A+ K LA +   YG+RVNC+S
Sbjct: 122 ALPYLR-KSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS 180

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGLN 238
           P  + + +    +       A + E    +  G++     +  AA++LA++ A+  TG+ 
Sbjct: 181 PGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCTGIE 239

Query: 239 LVVDGGFSV 247
           L+V GG  +
Sbjct: 240 LLVTGGAEL 248

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  184 bits (467), Expect = 1e-57
 Identities = 87/252 (34%), Positives = 127/252 (50%), Gaps = 6/252 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK  IITGGA G+GA AA+     GA+VV+ADV D  G A A +LG+   Y H DVT 
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTI 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           E++   +V  A  ++G +D + NNAGI    F            +V+ +N TG F+G K 
Sbjct: 63  EEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLE--TESVERFRKVVEINLTGVFIGMKT 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
               M     G I+  +SA   +    + +Y  SK+G+  L K+ A EL    +RVN V 
Sbjct: 121 VIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P    + +++   I         + MG +  +      IA A + L +D +S VTG  L 
Sbjct: 181 PGMTYTPMTAETGIRQGEGNYPNTPMGRVGNE---PGEIAGAVVKLLSDTSSYVTGAELA 237

Query: 241 VDGGFSVANPSL 252
           VDGG++   P++
Sbjct: 238 VDGGWT-TGPTV 248

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  183 bits (466), Expect = 3e-57
 Identities = 62/261 (23%), Positives = 110/261 (42%), Gaps = 14/261 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
              K  IITG ++GIG   A LF + GA V I        +     +       + V  +
Sbjct: 3   FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSV 62

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTT 112
             DVT+ED    ++++ + ++GK+D++ NNAG         +  D       + L +N  
Sbjct: 63  VADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQ 122

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
                 K     ++      +  ++      A      Y ++K  +    +  A +L ++
Sbjct: 123 AVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF 182

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLA 227
           G+RVN VSP  + +G ++   +     + F + M + +     G     E IAN  L+LA
Sbjct: 183 GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLA 242

Query: 228 TDEASD-VTGLNLVVDGGFSV 247
               S  + G ++V DGG S+
Sbjct: 243 DRNLSFYILGQSIVADGGTSL 263

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  180 bits (459), Expect = 2e-56
 Identities = 61/255 (23%), Positives = 106/255 (41%), Gaps = 9/255 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE---DVCYIHCD 57
           L+ K  ++TGG  GIG A  + F   GA +      +        K  +    V    CD
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCD 65

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
            +   E   L+ T  + + GKLDI+ NN G +       LD    D    ++ N    + 
Sbjct: 66  ASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTNLESAYH 123

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            ++ A  ++     G I+F +S    ++      Y+ +K  +  L + LA E    G+R 
Sbjct: 124 LSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRA 183

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N V+P  +++   +    +    +  +S      G+    E +++   +L    AS +TG
Sbjct: 184 NAVAP-AVIATPLAEAVYDDEFKKVVISR--KPLGRFGEPEEVSSLVAFLCMPAASYITG 240

Query: 237 LNLVVDGGFSVANPS 251
             + VDGG +V   S
Sbjct: 241 QTICVDGGLTVNGFS 255

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  179 bits (455), Expect = 1e-55
 Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 12/259 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYI 54
             GK  IITG ++GIG +AA +F + GA+V I    ++  +    ++       E +  +
Sbjct: 2   FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAV 61

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DVT      ++++T +AK+GK+DI+ NNAG       +  D P     +   +N    
Sbjct: 62  VADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAV 121

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
               +     +I      +  ++      A  G P Y  +K  +    +  A +L Q+G+
Sbjct: 122 IEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV 181

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR-----GQVLNAEGIANAALYLAT- 228
           RVN VSP  + +G      +     +   S +G+ +     G     E IAN  ++LA  
Sbjct: 182 RVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR 241

Query: 229 DEASDVTGLNLVVDGGFSV 247
           + +S + G ++V DGG ++
Sbjct: 242 NLSSYIIGQSIVADGGSTL 260

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  178 bits (452), Expect = 2e-55
 Identities = 80/251 (31%), Positives = 118/251 (47%), Gaps = 10/251 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDV 58
           L+GKVAIITGG  GIG A A  F E GAKV+I     ++G+  A  +G    + +   D 
Sbjct: 4   LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDS 63

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
           + ED  T L D     +G +  + NNAGI       V +T  ++  ++LAVN  G F G 
Sbjct: 64  SDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKS--VEETTTAEWRKLLAVNLDGVFFGT 121

Query: 119 KHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAE--LRQYGLR 175
           +   + M  +  G  I+  +S    +      AY  SK  +  + K  A +  L+ Y +R
Sbjct: 122 RLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVR 181

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VN V P  + + +       P   EA         G +     IA   +YLA++E+   T
Sbjct: 182 VNTVHPGYIKTPLVDD---LPGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT 238

Query: 236 GLNLVVDGGFS 246
           G   VVDGG++
Sbjct: 239 GSEFVVDGGYT 249

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (454), Expect = 3e-55
 Identities = 62/254 (24%), Positives = 101/254 (39%), Gaps = 26/254 (10%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG---------QALACKLGEDV 51
            +G+V ++TG   G+G A A  F E GA VV+ D+  +             +  ++    
Sbjct: 5   FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG 64

Query: 52  CYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNT 111
                +  S +    LV TA+  +G++D++ NNAGI+     S       D D +  V+ 
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQRVHL 122

Query: 112 TGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQ 171
            G F   + A   M  Q+ G I+ TASA       G   Y+ +K G++ L   L  E R+
Sbjct: 123 RGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 182

Query: 172 YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
             +  N ++P               A      + M     + L  E +A   L+L  +  
Sbjct: 183 NNIHCNTIAPN--------------AGSRMTETVMPEDLVEALKPEYVAPLVLWLCHESC 228

Query: 232 SDVTGLNLVVDGGF 245
               G    V  G+
Sbjct: 229 E-ENGGLFEVGAGW 241

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  177 bits (449), Expect = 3e-55
 Identities = 62/249 (24%), Positives = 112/249 (44%), Gaps = 10/249 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
             G  A++TG   GIG    K  H +GAKVV     ++   +LA +    +  +  D+  
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGD 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D      + A+   G +D++ NNA +V       L+  K   DR  +VN    F  ++ 
Sbjct: 62  WDA----TEKALGGIGPVDLLVNNAALVIMQ--PFLEVTKEAFDRSFSVNLRSVFQVSQM 115

Query: 121 AARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR MI +   G I+  +S    +       Y+ +K  +  L K +A EL  + +RVN V
Sbjct: 116 VARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSV 175

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P  +++ +  + S +P           +   +    E + N+ L+L +D ++  +G  +
Sbjct: 176 NPTVVLTDMGKKVSADPEFARKLKE--RHPLRKFAEVEDVVNSILFLLSDRSASTSGGGI 233

Query: 240 VVDGGFSVA 248
           +VD G+  +
Sbjct: 234 LVDAGYLAS 242

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  176 bits (447), Expect = 1e-54
 Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 8/255 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVC---YIHCD 57
           LEG  A++TGG+ GIG    +     GA V               +            CD
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           ++S  E   L++T    + GKL+I+ NNAGIV        D    D   ++++N    + 
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYK--EAKDYTVEDYSLIMSINFEAAYH 123

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            +  A   +    +G ++F +S    +A      Y  +K  +  L + LA E  +  +RV
Sbjct: 124 LSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRV 183

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-RGQVLNAEGIANAALYLATDEASDVT 235
           N V P  + + +      +P   E     +      ++   + +A    +L    AS VT
Sbjct: 184 NGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVT 243

Query: 236 GLNLVVDGGFSVANP 250
           G  + VDGG  +AN 
Sbjct: 244 GQIIYVDGGL-MANC 257

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  175 bits (444), Expect = 3e-54
 Identities = 84/247 (34%), Positives = 122/247 (49%), Gaps = 9/247 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---CKLGEDVCYIHCD 57
           L+GK AIITG  +GIG   A  F   GA VV++D+  +    +     +LG       CD
Sbjct: 9   LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCD 68

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           +TSE E++ L D A++K GK+DI+ NNAG    G     D P +D  R   +N    F  
Sbjct: 69  ITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYELNVFSFFHL 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
           ++  A  M     G IL   S   E   I   +Y  SK     LV+ +A +L +  +RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P G +   + ++ I P I +  L        ++   + IANAAL+L +  AS V+G 
Sbjct: 186 GIAP-GAILTDALKSVITPEIEQKMLQ--HTPIRRLGQPQDIANAALFLCSPAASWVSGQ 242

Query: 238 NLVVDGG 244
            L V GG
Sbjct: 243 ILTVSGG 249

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  173 bits (439), Expect = 1e-53
 Identities = 79/247 (31%), Positives = 129/247 (52%), Gaps = 9/247 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+ K  +ITG A GIG A  +LF + GA++V  D+++   +  A  +G     +  DV  
Sbjct: 3   LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH--PVVMDVAD 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +      A+A  G+LD + + AGI    F      P  D + VL VN TG FL AK 
Sbjct: 61  PASVERGFAEALAHLGRLDGVVHYAGITRDNF--HWKMPLEDWELVLRVNLTGSFLVAKA 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A+  M  ++ G I+ TAS    +  +G   Y  S  G++ L + LA EL ++G+RVN ++
Sbjct: 119 ASEAMREKNPGSIVLTASRVY-LGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLA 177

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++++  +   + E  ++      G+      +A AAL+L +DE+S +TG  L 
Sbjct: 178 PGFIETRMTAK--VPEKVREKAIA--ATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF 233

Query: 241 VDGGFSV 247
           VDGG ++
Sbjct: 234 VDGGRTI 240

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  171 bits (435), Expect = 4e-53
 Identities = 83/246 (33%), Positives = 128/246 (52%), Gaps = 11/246 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GKVA+++GGA G+GA+  +     GAKVV  D+ D  G+A+A +L +   Y+H DVT 
Sbjct: 4   LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQ 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             +    VDTAV  +G L ++ NNAGI++ G  ++ D   ++  R+L VN TG FLG + 
Sbjct: 64  PAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLGIRA 121

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             + M    +G I+  +S       +    YT +K+ +  L K  A EL   G+RVN + 
Sbjct: 122 VVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH 181

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++    +   I +  L               ++N  +YLA+DE+S  TG   V
Sbjct: 182 PGLVKTPMTDW--VPEDIFQTALGRAA-------EPVEVSNLVVYLASDESSYSTGAEFV 232

Query: 241 VDGGFS 246
           VDGG  
Sbjct: 233 VDGGTV 238

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (439), Expect = 5e-53
 Identities = 74/261 (28%), Positives = 116/261 (44%), Gaps = 15/261 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD--------VQDNLGQALACKLGEDVC 52
           L+G+VAI+TGGA+GIG A  K   E G+ VVIA           D L   L       V 
Sbjct: 10  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 69

Query: 53  YIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTT 112
            I C++ +E+E+ NLV + +  +GK++ + NN G                   VL  N T
Sbjct: 70  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS--PAEHISSKGWHAVLETNLT 127

Query: 113 GGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
           G F   K      + +H G I+             +     ++ G+  L K LA E    
Sbjct: 128 GTFYMCKAVYSSWMKEHGGSIVNIIVPTK-AGFPLAVHSGAARAGVYNLTKSLALEWACS 186

Query: 173 GLRVNCVSPYGLVSGISSRN--SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
           G+R+NCV+P  + S  +  N  S   +  E    ++     ++   E +++   +L +  
Sbjct: 187 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI--PAKRIGVPEEVSSVVCFLLSPA 244

Query: 231 ASDVTGLNLVVDGGFSVANPS 251
           AS +TG ++ VDGG S+   S
Sbjct: 245 ASFITGQSVDVDGGRSLYTHS 265

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  170 bits (433), Expect = 2e-52
 Identities = 57/255 (22%), Positives = 110/255 (43%), Gaps = 17/255 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE-----DVCYIH 55
              ++A++TG + GIGAA A+   + G KVV         + LA +         +    
Sbjct: 8   WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYR 67

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           CD+++E++I ++     +++  +DI  NNAG+      ++L    S    +  VN     
Sbjct: 68  CDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD--TLLSGSTSGWKDMFNVNVLALS 125

Query: 116 LGAKHAARVMIPQH--KGCILFTAS--ACTEIAGIGSPAYTVSKYGIIALVKILAAELR- 170
           +  + A + M  ++   G I+   S      +    +  Y+ +KY + AL + L  ELR 
Sbjct: 126 ICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELRE 185

Query: 171 -QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD 229
            Q  +R  C+SP  + +  + +  ++    E   +    ++   L  E +A A +Y+ + 
Sbjct: 186 AQTHIRATCISPGVVETQFAFK--LHDKDPEKAAATYEQMK--CLKPEDVAEAVIYVLST 241

Query: 230 EASDVTGLNLVVDGG 244
            A    G   +   G
Sbjct: 242 PAHIQIGDIQMRPTG 256

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  170 bits (432), Expect = 2e-52
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 10/254 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
           L G+VA++TGG+ G+G   A+   E G  VV+A          A KL    G +     C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG-GF 115
           DV++ +E+  L++    K+GKLD + N AGI  R      + P  +  +V+ VN  G  +
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH--PAEEFPLDEFRQVIEVNLFGTYY 120

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           +  +  + +    +   I   +    E+      AY  SK G+ +L K LA E  +YG+R
Sbjct: 121 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 180

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VN ++P    + ++     +P  L+  L  +    G+    E +   A++LA++EA  VT
Sbjct: 181 VNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI--PLGRTGVPEDLKGVAVFLASEEAKYVT 238

Query: 236 GLNLVVDGGFSVAN 249
           G  + VDGG++ AN
Sbjct: 239 GQIIFVDGGWT-AN 251

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  170 bits (432), Expect = 3e-52
 Identities = 79/257 (30%), Positives = 117/257 (45%), Gaps = 12/257 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+G+  +ITGGASG+G A    F   GAKV + D        L    G++V  I  DV S
Sbjct: 3   LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRS 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKS---DLDRVLAVNTTGGFLG 117
            ++        VA++GK+D +  NAGI D   A V    +S     D V  +N  G    
Sbjct: 63  LEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K     ++   +G ++FT S        G P YT +K+ I+ LV+ LA EL  Y +RVN
Sbjct: 123 VKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVN 180

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLR------GQVLNAEGIANAALYLAT-DE 230
            V   G+ S +   +S+           + ++       G++   E    A ++ AT  +
Sbjct: 181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATRGD 240

Query: 231 ASDVTGLNLVVDGGFSV 247
           A+  TG  L  DGG  V
Sbjct: 241 AAPATGALLNYDGGLGV 257

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (427), Expect = 7e-52
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 10/246 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L G+  ++TG   GIG    +  H  GA+VV          +L  +    +  +  D+  
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGD 63

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +      + A+   G +D++ NNA +        L+  K   DR   VN       ++ 
Sbjct: 64  WEA----TERALGSVGPVDLLVNNAAVALLQP--FLEVTKEAFDRSFEVNLRAVIQVSQI 117

Query: 121 AARVMIPQHKGC-ILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            AR +I +     I+  +S C++ A      Y  +K  +  L K++A EL  + +RVN V
Sbjct: 118 VARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAV 177

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           +P  +++ +      +P   +  L+ +    G+    E + NA L+L +D +   TG  L
Sbjct: 178 NPTVVMTSMGQATWSDPHKAKTMLNRI--PLGKFAEVEHVVNAILFLLSDRSGMTTGSTL 235

Query: 240 VVDGGF 245
            V+GGF
Sbjct: 236 PVEGGF 241

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  166 bits (422), Expect = 5e-51
 Identities = 64/249 (25%), Positives = 118/249 (47%), Gaps = 9/249 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
            E KVA++TG   GIG   AK+  ++ + V+          ++  ++   G +      D
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 67

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           V+ ++EI+ +++  + ++  +DI+ NNAGI              + + VL  N    F  
Sbjct: 68  VSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFL--RMKNDEWEDVLRTNLNSLFYI 125

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            +  ++ MI    G I+  +S       +G   Y+ SK G+I   K LA EL    + VN
Sbjct: 126 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 185

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL 237
            ++P  + S ++ + S    I +  +S +    G++   E +AN A +L++D++  + G 
Sbjct: 186 AIAPGFISSDMTDKIS--EQIKKNIISNI--PAGRMGTPEEVANLACFLSSDKSGYINGR 241

Query: 238 NLVVDGGFS 246
             V+DGG S
Sbjct: 242 VFVIDGGLS 250

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  165 bits (420), Expect = 1e-50
 Identities = 51/248 (20%), Positives = 81/248 (32%), Gaps = 12/248 (4%)

Query: 6   AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEIT 65
           AI+T      G  +A    E G  V   D        L         Y      SE E  
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE---AFAETYPQLKPMSEQEPA 59

Query: 66  NLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVM 125
            L++   + YG++D++ +N       F  +      D    +       F      A  M
Sbjct: 60  ELIEAVTSAYGQVDVLVSNDIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQM 118

Query: 126 IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLV 185
             +  G I+F  SA           YT ++ G   L   L+ EL +Y + V  + P  L 
Sbjct: 119 KKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLH 178

Query: 186 SGISSR------NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL 239
           S  S           NP  +            ++   + +     +LA+     +TG   
Sbjct: 179 SEDSPYFYPTEPWKTNPEHVAHVKK--VTALQRLGTQKELGELVAFLASGSCDYLTGQVF 236

Query: 240 VVDGGFSV 247
            + GGF +
Sbjct: 237 WLAGGFPM 244

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  165 bits (418), Expect = 1e-50
 Identities = 71/247 (28%), Positives = 119/247 (48%), Gaps = 9/247 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L GK  ++TG ASGIG AA  LF   GA +V  D ++ L       L  +   +  DV+ 
Sbjct: 3   LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSD 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              +  +   A+ ++G+L  + + AG+         + P    ++VL VN TG FL A+ 
Sbjct: 63  PKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL--SWNLPLEAWEKVLRVNLTGSFLVARK 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A  V+       +     +   +   G   Y   K G++ L + LA EL + G+RVN + 
Sbjct: 121 AGEVLEEGGSLVL---TGSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLL 177

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + +++   + P   E  +    +  G+    E +A AAL+L ++E++ +TG  L 
Sbjct: 178 PGLIQTPMTA--GLPPWAWEQEVGA--SPLGRAGRPEEVAQAALFLLSEESAYITGQALY 233

Query: 241 VDGGFSV 247
           VDGG S+
Sbjct: 234 VDGGRSI 240

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  164 bits (415), Expect = 6e-50
 Identities = 59/259 (22%), Positives = 100/259 (38%), Gaps = 18/259 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
              K  I+TGG  GIG A  +     GA V +          +  K+    G       C
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC 66

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV++ D +T  +    A  G +  +  NAG+         +    D   V  VN  G F 
Sbjct: 67  DVSNTDIVTKTIQQIDADLGPISGLIANAGVSV--VKPATELTHEDFAFVYDVNVFGVFN 124

Query: 117 GAKHAARVMIPQHKGCIL--------FTASACTEIAGIGSPAYTVSKYGIIALVKILAAE 168
             +  A++ + + +   +           +  +    +    Y  SK     LVK LAAE
Sbjct: 125 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 184

Query: 169 LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT 228
               G+RVN +SP  + +  ++   ++  I +   S +     +    E +   A+ L +
Sbjct: 185 WASAGIRVNALSPGYVNTDQTA--HMDKKIRDHQASNI--PLNRFAQPEEMTGQAILLLS 240

Query: 229 DEASDVTGLNLVVDGGFSV 247
           D A+ +TG    +DGG  +
Sbjct: 241 DHATYMTGGEYFIDGGQLI 259

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  163 bits (413), Expect = 1e-49
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 10/257 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIH 55
              +V +ITGG SG+G A A      GAK+ + DV     +A    +       +V    
Sbjct: 2   FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTV 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            DV+ E ++   V     ++G++D  +NNAGI  +          ++ D+V+++N  G F
Sbjct: 62  ADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVF 120

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           LG +   ++M  Q  G ++ TAS            Y  +K+G++ L +  A E  +YG+R
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 176 VNCVSPYGLVSGI--SSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEA 231
           +N ++P  + + +  +S   ++P        E   +    +   A  IA    +L +D+A
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 232 SDVTGLNLVVDGGFSVA 248
           S V    + +DGG S A
Sbjct: 241 SYVNATVVPIDGGQSAA 257

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 2e-49
 Identities = 65/260 (25%), Positives = 108/260 (41%), Gaps = 26/260 (10%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHC 56
            GKVA++TG A GIG A A+     GAKV + D     G      L      +   +I C
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 61

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV  + ++ +     V  +G+LDI+ NNAG+ +            + ++ L +N      
Sbjct: 62  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE----------KNWEKTLQINLVSVIS 111

Query: 117 GAKHAARVMIPQHKGC---ILFTASACTEIAGIGSPAYTVSKYGIIALVKI--LAAELRQ 171
           G       M  Q+ G    I+  +S    +     P Y  SK+GI+   +   LAA L  
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN 171

Query: 172 YGLRVNCVSPYGLVSGI--SSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLA 227
            G+R+N + P  + + I  S     N      +   + ++     +L+   IAN  + L 
Sbjct: 172 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI 231

Query: 228 TDEASDVTGLNLVVDGGFSV 247
            D+A  + G  + +     +
Sbjct: 232 EDDA--LNGAIMKITTSKGI 249

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  162 bits (410), Expect = 2e-49
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
            EGK+A++TG + GIG A A+     GAKV+     +N  QA++  LG +   +  +VT 
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTD 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
              I ++++   A++G++DI+ NNAGI              + + ++  N +  F  +K 
Sbjct: 62  PASIESVLEKIRAEFGEVDILVNNAGITRDNLLM--RMKDEEWNDIIETNLSSVFRLSKA 119

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
             R M+ +  G I+   S    +   G   Y  +K G+I   K LA E+   G+ VN V+
Sbjct: 120 VMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVA 179

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P G +       +++       L+++    G++  A+ IANA  +LA+DEA+ +TG  L 
Sbjct: 180 P-GFIE-TDMTRALSDDQRAGILAQV--PAGRLGGAQEIANAVAFLASDEAAYITGETLH 235

Query: 241 VDGGFSV 247
           V+GG  +
Sbjct: 236 VNGGMYM 242

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  162 bits (410), Expect = 3e-49
 Identities = 58/254 (22%), Positives = 101/254 (39%), Gaps = 8/254 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVC---YIHCD 57
           L+G  A++TGG+ GIG A  +     GA+V      +           E         CD
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 63

Query: 58  VTSEDEITNLVDTAVAKY-GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           + S  E   L+ T    + GKL+I+ NNA           D  + D + ++  N    + 
Sbjct: 64  LLSRTERDKLMQTVAHVFDGKLNILVNNA--GVVIHKEAKDFTEKDYNIIMGTNFEAAYH 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            ++ A  ++     G ++F +S     A      Y+ SK  I  + K LA E  +  +RV
Sbjct: 122 LSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRV 181

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNL--RGQVLNAEGIANAALYLATDEASDV 234
           N V+P  +++ +           +  +         G+    + ++    +L    AS +
Sbjct: 182 NSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI 241

Query: 235 TGLNLVVDGGFSVA 248
           TG  +  DGGF+  
Sbjct: 242 TGQIIWADGGFTAN 255

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  162 bits (410), Expect = 3e-49
 Identities = 81/252 (32%), Positives = 132/252 (52%), Gaps = 9/252 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALA---CKLGEDVCYIHC 56
           LEGKV +ITG ++G+G + A  F    AKVV+    +++   ++     K+G +   +  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DVT E ++ NLV +A+ ++GKLD+M NNAG+ +    S  +   SD ++V+  N TG FL
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLTGAFL 122

Query: 117 GAKHAARVMIPQHK-GCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           G++ A +  +     G ++  +S   +I       Y  SK G+  + + LA E    G+R
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
           VN + P  + + I++    +P       S      G +   E IA  A +LA+ EAS VT
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRADVES--MIPMGYIGEPEEIAAVAAWLASSEASYVT 240

Query: 236 GLNLVVDGGFSV 247
           G+ L  DGG ++
Sbjct: 241 GITLFADGGMTL 252

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  162 bits (410), Expect = 5e-49
 Identities = 64/257 (24%), Positives = 116/257 (45%), Gaps = 16/257 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
           LEGKVA++TG   GIG   A      G KV++             A   K G D   +  
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           +V   ++I  + + AV  +GKLDI+ +N+G+V  G   V D    + DRV  +NT G F 
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFG--HVKDVTPEEFDRVFTINTRGQFF 133

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            A+ A + +    +  ++ + +   +     +  Y+ SK  I    + +A ++    + V
Sbjct: 134 VAREAYKHLEIGGRLILMGSITGQAKAVPKHA-VYSGSKGAIETFARCMAIDMADKKITV 192

Query: 177 NCVSPYGLVSGISSR---------NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
           N V+P G+ + +             +++   ++ + +   +   +V     IA    +LA
Sbjct: 193 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 252

Query: 228 TDEASDVTGLNLVVDGG 244
           +++   VTG  + +DGG
Sbjct: 253 SNDGGWVTGKVIGIDGG 269

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  161 bits (407), Expect = 6e-49
 Identities = 79/250 (31%), Positives = 125/250 (50%), Gaps = 11/250 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GKV I+T  A GIG AAA  F   GAKV+  D+ ++  Q L    G  +     DVT 
Sbjct: 4   LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG--IQTRVLDVTK 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           + +I    +       +LD+++N AG V  G  +VLD  + D D  + +N    +L  K 
Sbjct: 62  KKQIDQFANEVE----RLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKA 115

Query: 121 AARVMIPQHKGCILFTASACTEIAG-IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
               M+ Q  G I+  +S  + + G +    Y+ +K  +I L K +AA+  Q G+R NCV
Sbjct: 116 FLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCV 175

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAALYLATDEASDVTGL 237
            P  + +             E   ++    +  G+   AE IA   +YLA+DE++ VTG 
Sbjct: 176 CPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYVTGN 235

Query: 238 NLVVDGGFSV 247
            +++DGG+S+
Sbjct: 236 PVIIDGGWSL 245

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  162 bits (410), Expect = 1e-48
 Identities = 64/252 (25%), Positives = 104/252 (41%), Gaps = 8/252 (3%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
            +GKVA ITGG +G+G     L    GA+ VIA  + ++ +A A ++    G  V  I C
Sbjct: 23  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 82

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF- 115
           DV   D + N V   +   G  +I+ NNA               +    +  +   G   
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFIS--PTERLSPNAWKTITDIVLNGTAF 140

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
           +  +   +++  Q     L   +   E           +K G+ A+ K LAAE  +YG+R
Sbjct: 141 VTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMR 200

Query: 176 VNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT 235
            N + P  + +  +          E  +       G++   E +AN A +L +D AS + 
Sbjct: 201 FNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDYASWIN 259

Query: 236 GLNLVVDGGFSV 247
           G  +  DGG  V
Sbjct: 260 GAVIKFDGGEEV 271

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  158 bits (400), Expect = 1e-47
 Identities = 69/257 (26%), Positives = 119/257 (46%), Gaps = 12/257 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           L+GK A+ITG A GIG A A+ +   GA+V IAD+     +A A ++G   C I  DVT 
Sbjct: 3   LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTD 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +  I   V   + ++G +DI+ NNA + D       +  +   DR+ A+N +G     + 
Sbjct: 63  QASIDRCVAELLDRWGSIDILVNNAALFDLAPIV--EITRESYDRLFAINVSGTLFMMQA 120

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYT-VSKYGIIALVKILAAELRQYGLRVNCV 179
            AR MI   +G  +   ++     G         +K  +I+L +     L ++G+ VN +
Sbjct: 121 VARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAI 180

Query: 180 SP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA 231
           +P         G+ +  +   ++     +  +       G++  AE +   A++LAT EA
Sbjct: 181 APGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLATPEA 239

Query: 232 SDVTGLNLVVDGGFSVA 248
             +      VDGG  ++
Sbjct: 240 DYIVAQTYNVDGGNWMS 256

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  157 bits (398), Expect = 2e-47
 Identities = 66/256 (25%), Positives = 110/256 (42%), Gaps = 14/256 (5%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVT 59
            +VA++TG  SGIG   A+   + G +V +    +   +    +L   G +     CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
           S  EI  LV   V +YG +D++ NNAG    G  +  +        V+  N TG F   K
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVTK 119

Query: 120 HAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
              +   M+ +  G I+  AS   +   + +  Y+ SK+G++   K L  EL + G+ VN
Sbjct: 120 QVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 179

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSE-------MGNLRGQVLNAEGIANAALYLATDE 230
            V P  + + +++    + + +    +E            G+ +    +A    YL    
Sbjct: 180 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPG 239

Query: 231 ASDVTGLNLVVDGGFS 246
           A+ VT   L V GG  
Sbjct: 240 AAAVTAQALNVCGGLG 255

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  157 bits (397), Expect = 3e-47
 Identities = 60/257 (23%), Positives = 100/257 (38%), Gaps = 16/257 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG----QALACKLGEDVCYIHC 56
           L GKVA+ TG   GIG   A      GA VV+     +       A   KLG     I  
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           D++   E+  L D AV+ +G LD + +N+G+        L+  +   D+V  +NT G F 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWC--DELEVTQELFDKVFNLNTRGQFF 121

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
            A+   +      +  +  ++ A           Y  SK  +    +  A +    G+ V
Sbjct: 122 VAQQGLKHCRRGGRIIL-TSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 180

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR---------GQVLNAEGIANAALYLA 227
           NC++P G+ + +   NS + A           +           ++     I  A   L 
Sbjct: 181 NCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC 240

Query: 228 TDEASDVTGLNLVVDGG 244
            +E+  + G  + + GG
Sbjct: 241 QEESEWINGQVIKLTGG 257

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  156 bits (396), Expect = 4e-47
 Identities = 76/259 (29%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-----NLGQALACKLGEDVCYIH 55
           L+GKVA++TG  SGIG   A      GA +V+    D      +   LA + G  V Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D++  + +  LVD AV + G++DI+ NN     +  A + D P    D +LA+N +  F
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNN--AGIQHTALIEDFPTEKWDAILALNLSAVF 119

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLR 175
            G   A   M  Q  G I+  ASA   +A     AY  +K+G++   K+ A E    G+ 
Sbjct: 120 HGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGIT 179

Query: 176 VNCVSP--------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA 227
            N + P           +S ++ +N ++       L        Q +  E +   A++LA
Sbjct: 180 ANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239

Query: 228 TDEASDVTGLNLVVDGGFS 246
           +D A+ +TG  + VDGG++
Sbjct: 240 SDAAAQITGTTVSVDGGWT 258

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  156 bits (394), Expect = 7e-47
 Identities = 78/259 (30%), Positives = 113/259 (43%), Gaps = 16/259 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
             GKV ++TG    IG A A    E G  + + D+     +     +   G +     CD
Sbjct: 3   FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCD 62

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
           VTSE+ +   VD+ V  +GK+D ++NNA      FA V D P  D  RVL +N TG F  
Sbjct: 63  VTSEEAVIGTVDSVVRDFGKIDFLFNNA-GYQGAFAPVQDYPSDDFARVLTINVTGAFHV 121

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVN 177
            K  +R MI Q+ G I+ TAS           AY  SK  IIAL +  A +L  Y +RVN
Sbjct: 122 LKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN 181

Query: 178 CVSPYGLVSGISSRNSINPAILEAFLSEMGNLR------------GQVLNAEGIANAALY 225
            +SP  +  G      +             + +             +  +   I     +
Sbjct: 182 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVAF 241

Query: 226 LATDEASDVTGLNLVVDGG 244
           L  D++S +TG+NL + GG
Sbjct: 242 LLGDDSSFMTGVNLPIAGG 260

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  155 bits (392), Expect = 2e-46
 Identities = 47/253 (18%), Positives = 83/253 (32%), Gaps = 23/253 (9%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA----CKLGEDVCYIHC 56
           L  K  I      GIG   ++   +   K  +   +     ALA         ++ +   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 57  DVT-SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
           DVT    E   L+     +   +DI+ N AGI+D             ++R +A+N TG  
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDH----------QIERTIAINFTGLV 112

Query: 116 LGAKHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY 172
                       +     G I    S     A    P Y+ SK  +++    LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           G+    ++P G+          +   +E  ++E+  L      +E      +       +
Sbjct: 173 GVTAYSINP-GITRTPLVHTFNSWLDVEPRVAEL-LLSHPTQTSEQCGQNFVKAI---EA 227

Query: 233 DVTGLNLVVDGGF 245
           +  G    +D G 
Sbjct: 228 NKNGAIWKLDLGT 240

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  151 bits (382), Expect = 3e-45
 Identities = 53/246 (21%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           +  K  ++   + GIG A A +  + GA+V I    + L +    +      Y+ CD+  
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR------YVVCDLRK 55

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +      +D    K  ++DI+  NAG    GF    +    D    +           ++
Sbjct: 56  D------LDLLFEKVKEVDILVLNAGGPKAGF--FDELTNEDFKEAIDSLFLNMIKIVRN 107

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
               M  +  G I+   S               ++  +   +K L+ E+  YG+ VNCV+
Sbjct: 108 YLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVA 167

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
             G       +  ++    +   S++     ++   E IA+   +L +++AS +TG  +V
Sbjct: 168 -PGWTETERVKELLSEEKKKQVESQI--PMRRMAKPEEIASVVAFLCSEKASYLTGQTIV 224

Query: 241 VDGGFS 246
           VDGG S
Sbjct: 225 VDGGLS 230

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  150 bits (379), Expect = 1e-44
 Identities = 66/249 (26%), Positives = 112/249 (44%), Gaps = 11/249 (4%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHCDVT 59
            V ++TG + GIG A A    + G KV++   +         K     G        DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
            E ++  ++ TA+  +G +D++ NN          ++   KS  D V+ +N TG FL  +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNN--AGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
            A ++M+ + KG I+  AS    I  IG   Y  +K G+I   K  A E     + VN V
Sbjct: 120 AATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVV 179

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT-DEASDVTGLN 238
            P  + S ++++  +   + +  L  +    G+    E +A    +LA    AS +TG  
Sbjct: 180 CPGFIASDMTAK--LGEDMEKKILGTI--PLGRTGQPENVAGLVEFLALSPAASYITGQA 235

Query: 239 LVVDGGFSV 247
             +DGG ++
Sbjct: 236 FTIDGGIAI 244

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  148 bits (375), Expect = 4e-44
 Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 12/246 (4%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCD 57
           + G++ +ITG   GIG   A  F +  +K+V+ D+  +  +  A K    G  V     D
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 64

Query: 58  VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLG 117
            ++ ++I +      A+ G + I+ NNAG+V      +  T    +++   VN    F  
Sbjct: 65  CSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFWT 122

Query: 118 AKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQY---GL 174
            K     M   + G I+  ASA   ++     AY  SK+  +   K L  EL      G+
Sbjct: 123 TKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGV 182

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           +  C+ P  + +G       NP+       E   +  ++++        +++ +  A   
Sbjct: 183 KTTCLCPNFVNTGFIK----NPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLT 238

Query: 235 TGLNLV 240
           T   ++
Sbjct: 239 TLERIL 244

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  147 bits (372), Expect = 1e-43
 Identities = 55/253 (21%), Positives = 98/253 (38%), Gaps = 10/253 (3%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHC 56
           L GK A++ G  +   +G A A    E GA+V ++   + L                   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGG 114
           DVT ++E+  L       +G LD + +      R       +DT + D    L V+    
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
              A+ A  ++  +  G I+      +E          ++K  + A V+ LA EL   G+
Sbjct: 126 VAVARRAEPLL--REGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGV 183

Query: 175 RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV 234
           RVN +S   + +  +        + +           + +  E + N  L+L +  AS +
Sbjct: 184 RVNAISAGPVRTVAARSIPGFTKMYDRVAQT--APLRRNITQEEVGNLGLFLLSPLASGI 241

Query: 235 TGLNLVVDGGFSV 247
           TG  + VD G+ +
Sbjct: 242 TGEVVYVDAGYHI 254

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  143 bits (361), Expect = 4e-42
 Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 14/246 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
              +  ++TGG  GIG A A+    +G KV +        + L          +  DVT 
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF--------GVEVDVTD 56

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D +           G ++++ +NAG+    F  ++   +   ++V+  N TG F  A+ 
Sbjct: 57  SDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF--LMRMTEEKFEKVINANLTGAFRVAQR 114

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
           A+R M     G ++F  S            Y  SK G+I + + +A EL +  +  N V+
Sbjct: 115 ASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA 174

Query: 181 PYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV 240
           P  + + ++   +++  I +  L  +     +V     +A    +LA+++AS ++G  + 
Sbjct: 175 PGYIDTDMTR--ALDERIQQGALQFI--PAKRVGTPAEVAGVVSFLASEDASYISGAVIP 230

Query: 241 VDGGFS 246
           VDGG  
Sbjct: 231 VDGGMG 236

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  141 bits (357), Expect = 3e-41
 Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 13/255 (5%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTS 60
           KVA++TG   GIG A A    ++G  V IAD  D   +A+A ++   G     +  DV+ 
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            D++   V+ A    G  D++ NNAG+       +       +D+V  +N  G   G + 
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPST--PIESITPEIVDKVYNINVKGVIWGIQA 119

Query: 121 AARVMIPQHKGCILFTASACTEIAGIG-SPAYTVSKYGIIALVKILAAELRQYGLRVNCV 179
           A      +  G  +  A +     G      Y+ SK+ +  L +  A +L   G+ VN  
Sbjct: 120 AVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGY 179

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLR-------GQVLNAEGIANAALYLATDEAS 232
            P  + + + +      +         G          G++   E +A    YLA+ ++ 
Sbjct: 180 CPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD 239

Query: 233 DVTGLNLVVDGGFSV 247
            +TG +L++DGG   
Sbjct: 240 YMTGQSLLIDGGMVF 254

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  141 bits (356), Expect = 4e-41
 Identities = 58/269 (21%), Positives = 100/269 (37%), Gaps = 32/269 (11%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADV-QDNLGQALACKLGED--------VCYIH 55
            A+ITGGA  IG + A   H+ G +VV+     +   Q L  +L              + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG---------FASVLDTPKSDLDRV 106
              +  D   +++D +   +G+ D++ NNA                A+      + +  +
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 107 LAVNTTGGFLGAKHAARVMIPQHKGCILFT-----ASACTEIAGIGSPAYTVSKYGIIAL 161
              N        +  AR                    A T++   G   YT++K+ +  L
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 162 VKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSE--MGNLRGQVLNAEGI 219
            +  A EL    +RVN V+P           ++     E +  +  +G        A  I
Sbjct: 183 TRAAALELAPRHIRVNAVAP----GLSLLPPAMPQETQEEYRRKVPLGQSEAS---AAQI 235

Query: 220 ANAALYLATDEASDVTGLNLVVDGGFSVA 248
           A+A  +L + +A  +TG  L VDGG  +A
Sbjct: 236 ADAIAFLVSKDAGYITGTTLKVDGGLILA 264

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  138 bits (349), Expect = 3e-40
 Identities = 70/252 (27%), Positives = 106/252 (42%), Gaps = 21/252 (8%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           + A++TGGASG+G AAA      G +VV+ D++           GED+ Y+  DVT E++
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------GEDLIYVEGDVTREED 52

Query: 64  ITNLVDTA-VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAA 122
           +   V  A         +     G+ ++              RVL VN  G F   + AA
Sbjct: 53  VRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAA 112

Query: 123 RV------MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
                        +G I+ TAS       IG  AY  SK G++AL    A EL  +G+RV
Sbjct: 113 WAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGIRV 172

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
             V+P GL      +     A  +A L+       ++   E  A   L++   E   + G
Sbjct: 173 VTVAP-GLFDTPLLQGLPEKA--KASLAAQVPFPPRLGRPEEYAALVLHIL--ENPMLNG 227

Query: 237 LNLVVDGGFSVA 248
             + +DG   +A
Sbjct: 228 EVVRLDGALRMA 239

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  138 bits (348), Expect = 4e-40
 Identities = 55/253 (21%), Positives = 93/253 (36%), Gaps = 27/253 (10%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAK-------VVIADVQDNLGQALACKL---GEDVCY 53
            + +ITG   GIG A A  F             +V++       + ++ +    G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 54  IHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTG 113
           I  D++   ++  L    V +YG +D + NNAG+   G  ++ D  + D D  +  N  G
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFG--ALSDLTEEDFDYTMNTNLKG 119

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG 173
            F   +    +M  QH G I F  S     A   S  Y +SK+G   LV+ +    R+  
Sbjct: 120 TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCN 179

Query: 174 LRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD 233
           +R+  V P            +   +      EM   +  ++  E IA   +      +  
Sbjct: 180 VRITDVQPGA----------VYTPMWGKVDDEM---QALMMMPEDIAAPVVQAYLQPSRT 226

Query: 234 VTG--LNLVVDGG 244
           V    +     G 
Sbjct: 227 VVEEIILRPTSGD 239

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  128 bits (323), Expect = 3e-36
 Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 13/256 (5%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALA--CKLGEDVCYIHC 56
           L GK  ++TG AS   I    A+  H  GA++      D L   +            + C
Sbjct: 3   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQC 62

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDR---GFASVLDTPKSDLDRVLAVNTTG 113
           DV  +  I  +       + K D   ++ G           V    +        +++  
Sbjct: 63  DVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYS 122

Query: 114 GFLGAKHAARVMIPQHKGCILFTASACTEIAGI-GSPAYTVSKYGIIALVKILAAELRQY 172
               AK    ++   + G  L T S       I       ++K  + A V+ +A  +   
Sbjct: 123 FVAMAKACRSML---NPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPE 179

Query: 173 GLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS 232
           G+RVN +S   + +  +S       +L    +       + +  E + N+A +L +D ++
Sbjct: 180 GVRVNAISAGPIRTLAASGIKDFRKMLAHCEA--VTPIRRTVTIEDVGNSAAFLCSDLSA 237

Query: 233 DVTGLNLVVDGGFSVA 248
            ++G  + VDGGFS+A
Sbjct: 238 GISGEVVHVDGGFSIA 253

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  125 bits (314), Expect = 3e-35
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 24/254 (9%)

Query: 2   EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSE 61
           E +  ++ GG   +G+   + F      V   DV +N            +  +    T +
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN-----EEASASVIVKMTDSFTEQ 55

Query: 62  DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHA 121
            +        +    K+D +   AG    G A    +   + D +   +     + +  A
Sbjct: 56  ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNA-KSKSLFKNCDLMWKQSIWTSTISSHLA 114

Query: 122 ARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG--LRVNCV 179
                 +  G +    +        G   Y ++K  +  L + LA +            V
Sbjct: 115 --TKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 172

Query: 180 SPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG--L 237
            P   +    +R S+  A   ++              E +        T      +G  +
Sbjct: 173 LP-VTLDTPMNRKSMPEADFSSWTP-----------LEFLVETFHDWITGNKRPNSGSLI 220

Query: 238 NLVVDGGFSVANPS 251
            +V   G +   P+
Sbjct: 221 QVVTTDGKTELTPA 234

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (311), Expect = 1e-34
 Identities = 72/246 (29%), Positives = 113/246 (45%), Gaps = 15/246 (6%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTS 60
           ++G VA+ITGGASG+G A A+     GA  V+ D+ ++ G+A A KLG +  +   DVTS
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTS 62

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRG----FASVLDTPKSDLDRVLAVNTTGGFL 116
           E ++   +  A  K+G++D+  N AGI                  D  RVL VN  G F 
Sbjct: 63  EKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFN 122

Query: 117 GAKHAARVMIPQH------KGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELR 170
             +  A  M          +G I+ TAS       +G  AY+ SK GI+ +   +A +L 
Sbjct: 123 VIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLA 182

Query: 171 QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE 230
             G+RV  ++P GL    +   +  P  +  FL+       ++ +    A+    +   E
Sbjct: 183 PIGIRVMTIAP-GLF--GTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLVQAII--E 237

Query: 231 ASDVTG 236
              + G
Sbjct: 238 NPFLNG 243

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 5e-34
 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 10/191 (5%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHC 56
           L+GK  I+TG + GIG   A    + GA VV+        Q +             YI  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
            +         V  A    G LD++  N         ++       + + + VN     +
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLSYVV 129

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL--RQYGL 174
               A  ++  Q  G I+  +S   ++A     AY+ SK+ +      +  E    +  +
Sbjct: 130 LTVAALPMLK-QSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 175 RVNCVSPYGLV 185
            +      GL+
Sbjct: 189 SITLCVL-GLI 198

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  122 bits (307), Expect = 6e-34
 Identities = 43/253 (16%), Positives = 91/253 (35%), Gaps = 21/253 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDNLGQALACKL-----GEDVC 52
           L   V ++TG + G G A A         G+ ++++   +++ + L  +L        V 
Sbjct: 4   LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVV 63

Query: 53  YIHCDVTSEDEITNLV----DTAVAKYGKLDIMYNNAGIVDRG-FASVLDTPKSDLDRVL 107
               D+ +E  +  L+    +    +  +  ++ NNA  +       +     ++++   
Sbjct: 64  LAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYW 123

Query: 108 AVNTTGGFLGAKHAARVM--IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKIL 165
           A+N T                P     ++  +S C      G   Y   K     L ++L
Sbjct: 124 ALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVL 183

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLR--GQVLNAEGIANAA 223
           AAE     +RV   +P G +     + +   +      S++  L+  G +++    A   
Sbjct: 184 AAEE--PSVRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL 240

Query: 224 LYLATDEASDVTG 236
           L L     +  +G
Sbjct: 241 LGLLQK-DTFQSG 252

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  116 bits (291), Expect = 2e-31
 Identities = 47/251 (18%), Positives = 97/251 (38%), Gaps = 6/251 (2%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALA--CKLGEDVCYIHC 56
           L+GK  +I G A+   I    A+     GA +    + ++L + +    +          
Sbjct: 3   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYEL 62

Query: 57  DVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           DV+ E+   +L ++     G LD + ++     +          S      A+  +   L
Sbjct: 63  DVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSL 122

Query: 117 GAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRV 176
                    +  +   +L  +   +           ++K  + + V+ LA +L ++ +RV
Sbjct: 123 IELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRV 182

Query: 177 NCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG 236
           N +S   + +  SS  +    IL+         +   ++ E + NA +YL +  +S V+G
Sbjct: 183 NALSAGPIRTLASSGIADFRMILKWNEINAPLRK--NVSLEEVGNAGMYLLSSLSSGVSG 240

Query: 237 LNLVVDGGFSV 247
               VD G+ V
Sbjct: 241 EVHFVDAGYHV 251

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  115 bits (288), Expect = 2e-31
 Identities = 36/246 (14%), Positives = 77/246 (31%), Gaps = 29/246 (11%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDV 58
           +     ++TG   GIG    +   ++     ++           L       V  +   V
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 59  TSEDEITNLVDTAVAKYGK--LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
           T +  +   V       G   L ++ NNAG++   + +  +  ++ +   L VNTT   L
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 117 GAKHAARVMIPQ------------------HKGCILFTASACTEIAGIGSPAYTVSKYGI 158
             +    ++                         +       +  A     AY +SK  I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA------ILEAFLSEMGNLRGQ 212
               + LA +L+   + V    P  + + +  +N+          ++ +F     +  G+
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQSTAELISSFNKLDNSHNGR 239

Query: 213 VLNAEG 218
                 
Sbjct: 240 FFMRNL 245

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  113 bits (284), Expect = 2e-30
 Identities = 54/283 (19%), Positives = 96/283 (33%), Gaps = 45/283 (15%)

Query: 5   VAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKLGE-------------- 49
           VA++TG A  +G + A+  H  G  V +   +      AL+  L                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 50  -------DVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRG----------- 91
                          VT       LV      +G+ D++ NNA                 
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 92  -FASVLDTPKSDLDRVLAVNTTGGFLGA------KHAARVMIPQHKGCILFTASACTEIA 144
                 +  ++    +   N    +                       I+    A T   
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 145 GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
            +G   YT++K  +  L +  A EL    +RVN V P          + + PA+ E   S
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG----LSVLVDDMPPAVWEGHRS 239

Query: 205 EMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           ++  L  +  +A  +++  ++L + +A  +TG  + VDGG+S+
Sbjct: 240 KV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 281

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  112 bits (280), Expect = 4e-30
 Identities = 51/269 (18%), Positives = 102/269 (37%), Gaps = 36/269 (13%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
            + +I+G A+GIGAA  K+    G ++V  D++D                +  D+++ + 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------------EVIADLSTAEG 47

Query: 64  ITNLVDTAVAKYGK-LDIMYNNAGIVDRG--FASVLDT----------------PKSDLD 104
               +   +AK  K +D +   AG+  +     +V+                   K    
Sbjct: 48  RKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQP 107

Query: 105 RVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG-SPAYTVSKYGIIALVK 163
             + +++      A     + +    G      +        G + AY  SK  +   V+
Sbjct: 108 AAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVR 167

Query: 164 ILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAA 223
             AA   + G+R+N ++P    + +      +P   E+    +  + G+      +A+  
Sbjct: 168 KRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM-GRRAEPSEMASVI 226

Query: 224 LYLATDEASDVTGLNLVVDGGFS-VANPS 251
            +L +  AS V G  +V+DGG   V  P+
Sbjct: 227 AFLMSPAASYVHGAQIVIDGGIDAVMRPT 255

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (273), Expect = 8e-29
 Identities = 55/284 (19%), Positives = 88/284 (30%), Gaps = 74/284 (26%)

Query: 4   KVAIITGGASGIGAAAAKLFH-ENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVT 59
            VA++TGG  GIG A  +         VV+       GQA   +L   G    +   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 60  SEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAK 119
               I  L D    +YG LD++ NNAGI  +   +         +  +  N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKV--ADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 120 HAARVMIPQHKGCILFTASACTEIAGIGSPAY---------------------------- 151
               ++ PQ  G ++  +S  +  A                                   
Sbjct: 122 ELLPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK 179

Query: 152 -------------TVSKYGIIALVKILAAELRQY----GLRVNCVSPYGLVSGISSRNSI 194
                         V+K G+  L +I A +L +      + +N   P G V         
Sbjct: 180 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP-GWVR-------- 230

Query: 195 NPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT--DEASDVTG 236
                    ++M   +    + E  A   +YLA    +A    G
Sbjct: 231 ---------TDMAGPKA-TKSPEEGAETPVYLALLPPDAEGPHG 264

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  108 bits (269), Expect = 2e-28
 Identities = 48/261 (18%), Positives = 95/261 (36%), Gaps = 15/261 (5%)

Query: 1   LEGKVAIITGGA--SGIGAAAAKLFHENGAKVVIADVQ-DNLGQALACKLGEDVCYIHCD 57
           L+GK  +++G    S I    A++  E GA++V+       L Q +  +L      +  D
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 58  VTSEDEITNLVDTAVAKY---GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           V +E+ + +L            KLD + ++ G + +    +     +    V        
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
           +  A  A  ++   + G  +         A       TV+K  + ++ + +A E  +YG+
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGV 183

Query: 175 RVNCVSP---------YGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALY 225
           R N V+            +   +         +LE    +   +   + +A  +A     
Sbjct: 184 RSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVCA 243

Query: 226 LATDEASDVTGLNLVVDGGFS 246
           L +D     TG  +  DGG  
Sbjct: 244 LLSDWLPATTGDIIYADGGAH 264

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 2e-28
 Identities = 38/249 (15%), Positives = 71/249 (28%), Gaps = 26/249 (10%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA---------CKLGEDVCYI 54
            V +ITG +SGIG   A     + ++           +                  +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
             DV     +    +        + +     G++    A   D   S LD     N  G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDV----NVVGT 118

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGL 174
               +     M  +  G +L T S    +    +  Y  SK+ +  L + LA  L  +G+
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 175 RVNCVSPYGLVSGISSRNSINPA-------------ILEAFLSEMGNLRGQVLNAEGIAN 221
            ++ +    + +    +   +P                +         R    N E +A 
Sbjct: 179 HLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE 238

Query: 222 AALYLATDE 230
             L      
Sbjct: 239 VFLTALRAP 247

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  102 bits (254), Expect = 1e-26
 Identities = 42/247 (17%), Positives = 87/247 (35%), Gaps = 28/247 (11%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED 62
           GKV I+ GG   +G+A  + F +NG  V+  D+  N          +    +  +    +
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-------DQADSNILVDGNKNWTE 54

Query: 63  EITNLVDTAVA--KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           +  ++++   +  +  ++D ++  AG    G AS  D  K+  D ++  +     + AK 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNA-DLMIKQSVWSSAIAAKL 113

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYG--LRVNC 178
                  +  G +  T +A           Y ++K  +  L   LAA+         V  
Sbjct: 114 --ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 171

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL-YLATDEASDVTGL 237
           + P   +    +R  +  A   ++                I+   L +     +   +G 
Sbjct: 172 IMP-VTLDTPMNRKWMPNADHSSWTP-----------LSFISEHLLKWTTETSSRPSSGA 219

Query: 238 NLVVDGG 244
            L +   
Sbjct: 220 LLKITTE 226

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 92.5 bits (228), Expect = 2e-22
 Identities = 50/284 (17%), Positives = 89/284 (31%), Gaps = 39/284 (13%)

Query: 1   LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQA---------------- 42
           L GK A I G A   G G A AK     GA++++      L                   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 43  ------------LACKLGEDVCY-------IHCDVTSEDEITNLVDTAVAKYGKLDIMYN 83
                       L                      +S   +    +     +G +DI+ +
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 84  NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEI 143
           +          +L+T +      ++ ++        H   +M P      L   ++   I
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 144 AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL 203
            G G    +           +     R+  +RVN +S   L S  +        ++E   
Sbjct: 186 PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 204 SEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV 247
           +       + L A+ + NAA +L +  AS +TG  + VD G + 
Sbjct: 246 N--NAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS 287

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 91.5 bits (225), Expect = 8e-22
 Identities = 47/324 (14%), Positives = 97/324 (29%), Gaps = 80/324 (24%)

Query: 3   GKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQ------------------- 41
             +  I G     G G   AK   +   K++                             
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 42  ---ALACKLGEDVCYIH-------------CDVTSEDEITNLVDTAVAKYGKLDIMYNNA 85
               +   L  D  +                ++     I ++ +    KYGK++++ ++ 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 86  GIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG 145
                    +L+T +      L+ ++       K+   +M PQ       T  A  ++  
Sbjct: 122 ANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIIS-LTYHASQKVVP 180

Query: 146 IGSPAYTVSKYGIIALVKILAAEL-RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
                 + +K  + +  ++LA  L R Y +R+N +S   L S  ++  +      E   +
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 205 EMGNLR-----------------------------------------GQVLNAEGIANAA 223
           +  N                                            Q L +  I + A
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 224 LYLATDEASDVTGLNLVVDGGFSV 247
            +L + E+  +TG  + VD G ++
Sbjct: 301 SFLLSRESRAITGQTIYVDNGLNI 324

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 85.5 bits (210), Expect = 4e-20
 Identities = 44/262 (16%), Positives = 76/262 (29%), Gaps = 41/262 (15%)

Query: 4   KVAIITGGASGIGAAAAKLF---HENGAKVVIADVQDNLGQALA--CKLGEDVCYIHCDV 58
              +ITG   G+G    K      +    +          + L    K   ++  +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 59  TSEDEI--TNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFL 116
            + D           V K   L++++NNAGI  +  A +      +L   L  NT    +
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIM 121

Query: 117 GAKHAARVMIPQHKGCILF--------------TASACTEIAGIGSPAYTVSKYGIIALV 162
            AK    ++    K                      +       G  AY  SK  + A  
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 163 KILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANA 222
           K L+ +L    +    + P G V                  ++MG      L+       
Sbjct: 182 KSLSVDLYPQRIMCVSLHP-GWVK-----------------TDMGGSSAP-LDVPTSTGQ 222

Query: 223 ALYLATDEASDVTGLNLVVDGG 244
            +   +       G  +  DG 
Sbjct: 223 IVQTISKLGEKQNGGFVNYDGT 244

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 72.2 bits (176), Expect = 8e-16
 Identities = 23/171 (13%), Positives = 49/171 (28%), Gaps = 15/171 (8%)

Query: 1   LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGED--VCYIHCDV 58
           ++GK A++  G   +G  +A L    GA+VV+   + +  QA A  + +   V     + 
Sbjct: 21  VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 80

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
             +      V            ++            +   P++      ++     +   
Sbjct: 81  ADDASRAEAV-------KGAHFVFTAGA------IGLELLPQAAWQNESSIEIVADYNAQ 127

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAEL 169
                  I        +         GIG     + +  I  L +      
Sbjct: 128 PPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFESSEGVF 178

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 64.3 bits (155), Expect = 7e-13
 Identities = 26/187 (13%), Positives = 52/187 (27%), Gaps = 6/187 (3%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTS 60
           +VA++ GG   +G   A      G ++V+   ++   +A A +      D          
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 61  EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
             E  ++    +     +D   +   I+          P            +     A+ 
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVP--VSRGAKGFTYSSERSAAEI 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
            A V+  +     L T  A           + V   G     K +   L      +  + 
Sbjct: 119 VAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLD 178

Query: 181 PYGLVSG 187
              L + 
Sbjct: 179 AGPLSNS 185

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 65.0 bits (157), Expect = 7e-13
 Identities = 34/254 (13%), Positives = 70/254 (27%), Gaps = 24/254 (9%)

Query: 3   GKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCYIHCDV 58
               ++TGG  G+G   A+     GA  ++    +    +    L  +L           
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGA 118
               +  ++ +        + +             +V       ++R       G     
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGAR--- 125

Query: 119 KHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNC 178
            +   +         +  +S  +     G   Y      +      LA + R  GL    
Sbjct: 126 -NLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDG----LAQQRRSDGLPATA 180

Query: 179 VSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN 238
           V+  G  +G          + E  +++     G +      A  AL  A D A       
Sbjct: 181 VAW-GTWAG--------SGMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVCP--- 228

Query: 239 LVVDGGFSVANPSL 252
           +V+D  +     + 
Sbjct: 229 IVIDVRWDRFLLAY 242

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 5e-07
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 29/196 (14%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIAD---------VQDNLGQALACKLGEDVCYI 54
            VA+ITG     G+  A+   E G +V               ++L +     +  ++   
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           + D+T    +  +++    +    +I    A        S +       +    V+   G
Sbjct: 62  YGDLTDSTCLVKIIN----EVKPTEIYNLGA-------QSHVKISFDLAEYTADVDGV-G 109

Query: 115 FLGAKHAARVMIPQHKGCILFTASACT--EIAGIG----SPAYTVSKYGI--IALVKILA 166
            L    A +     +       +++    ++  I     +P Y  S YG   +    I+ 
Sbjct: 110 TLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVV 169

Query: 167 AELRQYGLRVNCVSPY 182
                Y L       +
Sbjct: 170 NFREAYNLFAVNGILF 185

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 44.8 bits (105), Expect = 6e-06
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 34/214 (15%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIAD---------VQDNLGQALACKLGEDVCYI 54
           KVA+ITG     G+  A+   E G +V               D++ Q             
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPH-TCNPKFHLH 60

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           + D++    +T ++     +  + D +YN   +      S +       +    V+   G
Sbjct: 61  YGDLSDTSNLTRIL-----REVQPDEVYNLGAM------SHVAVSFESPEYTADVDAM-G 108

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIG--------SPAYTVSKYGI--IALVKI 164
            L    A R +  + K      +++  E+ G+         +P Y  S Y +  +    I
Sbjct: 109 TLRLLEAIRFLGLEKKTRFYQASTS--ELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWI 166

Query: 165 LAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI 198
                  YG+       +   S       +   I
Sbjct: 167 TVNYRESYGMYACNGILFNHESPRRGETFVTRKI 200

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 43.9 bits (102), Expect = 1e-05
 Identities = 32/213 (15%), Positives = 56/213 (26%), Gaps = 30/213 (14%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIAD---------VQDNLGQALACKLGEDVCYI 54
           K+A+ITG     G+   +     G +V               +++           +   
Sbjct: 2   KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 55  HCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGG 114
           + D+T    +   +        K D +YN A       +   + P    D         G
Sbjct: 62  YADLTDASSLRRWI-----DVIKPDEVYNLAAQSHVAVSF--EIPDYTAD-----VVATG 109

Query: 115 FLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT-------VSKYGIIALV--KIL 165
            L    A R         + +  +  +E+ G   P  +        S Y           
Sbjct: 110 ALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYT 169

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAI 198
                 YGL       +   S     N +   I
Sbjct: 170 VNYREAYGLFACNGILFNHESPRRGENFVTRKI 202

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 41.9 bits (97), Expect = 5e-05
 Identities = 30/196 (15%), Positives = 66/196 (33%), Gaps = 14/196 (7%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIADV----QDNLGQALACKLGEDVCYIHCDVTSED 62
           ++TGG+  IG+       +NG  V+I D     + ++   +    G+   ++  D+ +E 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGI--VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
            +T ++         +D + + AG+  V       L+   ++++  L + +       K+
Sbjct: 64  LMTEIL-----HDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKN 118

Query: 121 AARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVS 180
                     G         +   G     Y  SK  +    +IL    +        + 
Sbjct: 119 FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVE---QILTDLQKAQPDWSIALL 175

Query: 181 PYGLVSGISSRNSINP 196
            Y    G      +  
Sbjct: 176 RYFNPVGAHPSGDMGE 191

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 41.8 bits (96), Expect = 6e-05
 Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 6/66 (9%)

Query: 3  GKVAIITGGASGIGAAAAKLFHENGAKVVIADV----QDNLGQALACKLGEDVCYIHCDV 58
          GK   +TG     G   +      GA V    +      +L +    ++ + +     D+
Sbjct: 8  GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA--RVADGMQSEIGDI 65

Query: 59 TSEDEI 64
            ++++
Sbjct: 66 RDQNKL 71

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.1 bits (95), Expect = 1e-04
 Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 3/66 (4%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIAD---VQDNLGQALACKLGEDVCYIHCDVTS 60
          + A++TG     GA  AKL  E G +V         D   +     +  D+ Y   D+  
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 61 EDEITN 66
             +  
Sbjct: 61 ACSVQR 66

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 37/88 (42%), Gaps = 11/88 (12%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIAD-----VQDNLGQALACKLGEDVCYIHCDV 58
          K+ ++TGGA  IG+       ENG   V+AD       D++ + L       + +   D+
Sbjct: 2  KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVLTKHHIPFYEVDL 60

Query: 59 TSEDEITNLVDTAVAKYGKLDIMYNNAG 86
               +  +      K  K+D + + AG
Sbjct: 61 CDRKGLEKVF-----KEYKIDSVIHFAG 83

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 32/193 (16%), Positives = 57/193 (29%), Gaps = 47/193 (24%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITN 66
            I G    +G+A  +   + G   ++   +D L                 ++     + +
Sbjct: 6   FIAGHRGMVGSAIRRQLEQRGDVELVLRTRDEL-----------------NLLDSRAVHD 48

Query: 67  LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI 126
              +      ++D +Y  A  V    A+            +  N     +   +      
Sbjct: 49  FFASE-----RIDQVYLAAAKVGGIVANNTYPAD-----FIYQNM----MIESNIIHAAH 94

Query: 127 PQHKGCILFTASAC-----------TEIAGIGSPAYTVSKYGI--IALVKILAAELRQYG 173
                 +LF  S+C                 G+   T   Y I  IA +K+  +  RQYG
Sbjct: 95  QNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYG 154

Query: 174 LRVNCVSP---YG 183
                V P   YG
Sbjct: 155 RDYRSVMPTNLYG 167

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 33/219 (15%), Positives = 61/219 (27%), Gaps = 26/219 (11%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIA----DVQDNLGQALACKLGEDVCYIHCDVTSED 62
           +ITGGA  IG+A  +   +N    V+         NL             + H D+    
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 63  EITNLVDTAVAKYGKLDIMYNNAGI--VDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKH 120
           EIT + +       + D + + A    VDR         ++++    A+        +  
Sbjct: 64  EITRIFEQY-----QPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSAL 118

Query: 121 AARV-------------MIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI--IALVKIL 165
                            +            S    +    +     S Y     +   ++
Sbjct: 119 GEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLV 178

Query: 166 AAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS 204
            A  R YGL     +             + P ++   L 
Sbjct: 179 RAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALE 217

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 34/195 (17%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE 63
           K  +ITGGA  +G+        +G +V +    DN        +   + + + ++ + D 
Sbjct: 2   KRILITGGAGFVGSHLTDKLMMDGHEVTVV---DNFFTGRKRNVEHWIGHENFELINHD- 57

Query: 64  ITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR 123
              +V+    +    D +Y+         AS    P    + +  + T    +G  +   
Sbjct: 58  ---VVEPLYIEV---DQIYH--------LASPASPPNYMYNPIKTLKTN--TIGTLNMLG 101

Query: 124 VMIPQHKGCILFTASACT-----------EIAGIGSPAYTVSKYGI--IALVKILAAELR 170
           +   +    +L  +++             +  G  +P    + Y         +  A ++
Sbjct: 102 LAK-RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 160

Query: 171 QYGLRVNCVSPYGLV 185
           Q G+ V     +   
Sbjct: 161 QEGVEVRVARIFNTF 175

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 5e-04
 Identities = 37/219 (16%), Positives = 66/219 (30%), Gaps = 33/219 (15%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIAD--------VQDNLGQALACKLGEDVCYIH 55
           KV +ITG A  IG+   +   +   KVV  D          D +   ++ K   +  +I 
Sbjct: 17  KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQ 76

Query: 56  CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGF 115
            D+ + D+                             A++   P+S  D + +  T    
Sbjct: 77  GDIRNLDDC---------------NNACAGVDYVLHQAALGSVPRSINDPITSNATN--I 119

Query: 116 LGAKHAARVMIPQHKGCILFTASACTEIAGIG------SPAYTVSKYGIIALV--KILAA 167
            G  +              + AS+ T     G      +    +S Y +   V       
Sbjct: 120 DGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADV 179

Query: 168 ELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM 206
             R YG     +  + +       N    A++  + S M
Sbjct: 180 FSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM 218

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.8 bits (88), Expect = 5e-04
 Identities = 12/87 (13%), Positives = 21/87 (24%), Gaps = 20/87 (22%)

Query: 3  GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--------------- 47
          G   ++ GG    G A A    +   +V I D            L               
Sbjct: 1  GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISR 60

Query: 48 -----GEDVCYIHCDVTSEDEITNLVD 69
               G+ +     D+   + +     
Sbjct: 61 WKALTGKSIELYVGDICDFEFLAESFK 87

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.6 bits (88), Expect = 7e-04
 Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 10/72 (13%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIAD------VQDNLGQALACKLGEDVCYIHCD 57
          K+ +ITGG   +G+  A      G  +++ D        DNL    +     +  ++H D
Sbjct: 2  KL-LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG---NFEFVHGD 57

Query: 58 VTSEDEITNLVD 69
          + +++++T L+ 
Sbjct: 58 IRNKNDVTRLIT 69

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

 Score = 36.9 bits (84), Expect = 0.002
 Identities = 12/37 (32%), Positives = 20/37 (54%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG 40
          K+AII  G SG+  A A L  +   +V + + + + G
Sbjct: 6  KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG 42

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.3 bits (85), Expect = 0.002
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 7  IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA-----LACKLGEDVCYIHCDVTSE 61
          I+TGGA  IG+      + N   V +  + D L  A     L   LG+ V  +  D+   
Sbjct: 6  IVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAILGDRVELVVGDIADA 64

Query: 62 DEITNL 67
          + +  L
Sbjct: 65 ELVDKL 70

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

 Score = 36.7 bits (83), Expect = 0.002
 Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 7/106 (6%)

Query: 4   KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYI-----HCDV 58
            V I+  G +G+  +AA +    G +V + +  +  G  +     E+  +          
Sbjct: 32  HVVIVGAGMAGL--SAAYVLAGAGHQVTVLEASERPGGRVRTYRNEEAGWYANLGPMRLP 89

Query: 59  TSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD 104
                +   +     +  +     +NA    +     +   K D  
Sbjct: 90  EKHRIVREYIRKFDLRLNEFSQENDNAWYFIKNIRKKVGEVKKDPG 135

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 5/68 (7%)

Query: 2  EGKVAIITGGASGIGAAAAKLFHENGAKVVI----ADVQDNLGQALACKLGEDVCY-IHC 56
          EG + ++TG    + +   +   E+G KV      A    NL +    K        +  
Sbjct: 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVE 69

Query: 57 DVTSEDEI 64
          D+  +   
Sbjct: 70 DMLKQGAY 77

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 36.5 bits (82), Expect = 0.003
 Identities = 11/65 (16%), Positives = 20/65 (30%), Gaps = 4/65 (6%)

Query: 4  KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG-EDVCYIHCDVTSED 62
          +V +I G    IG    +         V     D    A++  L      ++  D++   
Sbjct: 2  RV-LILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNHPHFHFVEGDISIHS 58

Query: 63 EITNL 67
          E    
Sbjct: 59 EWIEY 63

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.5 bits (83), Expect = 0.003
 Identities = 21/175 (12%), Positives = 44/175 (25%), Gaps = 4/175 (2%)

Query: 7   IITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITN 66
            ITG    I +  A+     G  V+ +D + N          E        + +  ++T 
Sbjct: 19  SITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTE 78

Query: 67  LVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI 126
            VD        +  M            +      + ++          F  +        
Sbjct: 79  GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEF 138

Query: 127 PQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSP 181
            Q +   +    +    A      + + K     L K      + +G+       
Sbjct: 139 KQLETTNVSLKESDAWPAEPQDA-FGLEKLATEELCKHYN---KDFGIECRIGRF 189

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	302
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.93
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.9
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.9
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.9
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.9
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.88
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.88
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.87
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.87
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.87
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.86
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.86
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.86
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.85
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.85
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.84
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.84
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.83
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.83
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.82
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.79
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.75
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.71
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.62
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.56
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.53
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.52
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.51
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.49
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.84
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.19
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.07
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.02
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.01
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.97
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.96
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.88
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.88
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.82
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.82
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.78
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.74
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.73
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.64
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.57
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.55
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.53
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.52
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.44
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.42
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.41
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.35
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.26
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.23
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.2
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.18
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.17
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.11
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.1
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.09
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.09
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.08
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.07
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.07
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.05
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.98
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.92
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.9
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.9
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.89
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.87
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.86
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.86
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.81
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.8
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.79
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.78
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.74
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.74
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.72
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.65
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.58
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.56
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.56
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.55
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.52
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.49
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.47
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.42
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.37
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.2
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.18
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.05
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.01
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.0
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.93
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.93
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.88
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.87
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.85
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.79
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.76
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.73
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.7
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	95.58
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.57
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.54
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.52
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.49
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.47
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.44
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.41
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.31
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.19
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.15
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.15
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.12
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.08
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.89
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	94.79
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.6
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	94.52
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.48
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.27
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.25
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.24
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.21
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.17
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.08
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	94.02
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.95
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	93.87
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	93.86
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.85
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.75
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.67
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	93.61
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.51
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.51
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.47
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.4
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.37
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.36
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	93.35
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	93.34
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.08
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.06
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.92
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	92.73
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.41
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.39
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.33
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.25
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.22
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	92.13
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.02
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	92.01
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.87
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.75
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	91.62
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	91.54
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	91.19
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.99
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	90.92
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	90.84
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	90.8
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.48
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	90.46
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.43
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.38
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	90.34
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	90.23
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	90.11
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	89.97
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	89.85
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	89.85
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	89.71
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.31
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	88.86
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	88.76
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	88.72
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	88.64
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	88.48
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	88.38
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	88.27
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	88.27
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	88.12
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	87.97
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.67
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	87.63
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	87.58
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	87.21
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	86.92
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	86.65
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.61
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	86.37
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	86.14
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	86.06
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	85.79
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	85.77
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	85.39
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	85.31
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.04
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	84.98
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	84.97
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	84.77
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	84.46
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	84.2
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	84.2
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	84.06
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	83.54
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	83.25
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	82.77
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	82.63
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	82.55
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	82.34
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.22
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	82.03
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	81.93
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	81.84
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	81.61
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	81.44
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	81.41
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	81.4
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	81.36
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	81.28
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	81.17
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	80.82
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.52
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	80.34
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	80.13

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.9e-56  Score=376.60  Aligned_cols=241  Identities=30%  Similarity=0.450  Sum_probs=223.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.++++.++++.+...+.+|++|+++++++++++.+++|++|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            68999999999999999999999999999999999999999998888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||+|+++
T Consensus        82 lVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~  159 (243)
T d1q7ba_          82 LVNNAGITRD--NLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG  159 (243)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             ehhhhhhccc--cccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHH
Confidence            9999998765  68899999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|+++.|++++|||||+|+||++.|++....  .++..+.+...  .|.+|+.+|+|+|++++||+|+.++++|||.|.
T Consensus       160 lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~--~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i~  235 (243)
T d1q7ba_         160 FSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQ--VPAGRLGGAQEIANAVAFLASDEAAYITGETLH  235 (243)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTT--CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhc--CCCCCCCCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            99999999999999999999999999988664  34444444433  234899999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||.++
T Consensus       236 vdGG~~~  242 (243)
T d1q7ba_         236 VNGGMYM  242 (243)
T ss_dssp             ESTTSSC
T ss_pred             ECCCeEe
Confidence            9999775

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.2e-54  Score=371.67  Aligned_cols=243  Identities=31%  Similarity=0.482  Sum_probs=219.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..++    .+.++.++.+|++|+++++++++++.+++|
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   82 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999999998877665543    367889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.+++++++.++|+|++++.|+||+++|..+ ..+.++..+|++||
T Consensus        83 ~iDiLVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          83 KLDTVVNAAGINRR--HPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CCCEEEECCCCCCC--CChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence            99999999998765  6899999999999999999999999999999999988999999999765 45677889999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +|++.|+|.++.|++++|||||+|+||+|.|++.......++..+.+....  |.+|+.+|+|+|++++||+|+.++++|
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--pl~R~~~pedvA~~v~fL~S~~a~~it  238 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRI--PLGRTGVPEDLKGVAVFLASEEAKYVT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTC--TTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcC--CCCCCCCHHHHHHHHHHHhCchhCCCc
Confidence            999999999999999999999999999999999876554555555555443  348999999999999999999999999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      ||+|.+|||++.
T Consensus       239 G~~i~vDGG~ta  250 (251)
T d1vl8a_         239 GQIIFVDGGWTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEeCcCeeC
Confidence            999999999863

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1e-54  Score=371.28  Aligned_cols=242  Identities=29%  Similarity=0.431  Sum_probs=208.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++.. .+...+..+.++.++.+|++|+++++++++++.+++|++|
T Consensus         3 L~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iD   82 (247)
T d2ew8a1           3 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   82 (247)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999999999998754 4455566678899999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||+...  .++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||+|++
T Consensus        83 ilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  160 (247)
T d2ew8a1          83 ILVNNAGIYPL--IPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANI  160 (247)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHH
T ss_pred             EEEECCCCCCC--CChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHH
Confidence            99999998765  6889999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .|+|+++.|++++|||||+|+||+|.|++....... ...+. ......+.+|+.+|+|+|++++||+|+.++++|||+|
T Consensus       161 ~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~-~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~i  238 (247)
T d2ew8a1         161 GFTRALASDLGKDGITVNAIAPSLVRTATTEASALS-AMFDV-LPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCC--------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc-hhHHH-HHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            999999999999999999999999999988654321 22222 2222234588999999999999999999999999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||+.
T Consensus       239 ~vDGG~~  245 (247)
T d2ew8a1         239 AVDGGMV  245 (247)
T ss_dssp             EESSSCC
T ss_pred             EECCCEe
Confidence            9999975

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.7e-54  Score=367.42  Aligned_cols=237  Identities=34%  Similarity=0.534  Sum_probs=220.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.+..++++|++|+++++++++++.+++|++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            68999999999999999999999999999999999999999999988888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|+++|++|+.+++++++.+.|.|.+++.|+||++||.++..+.+++.+|++||+|++.
T Consensus        84 linnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~  161 (244)
T d1nffa_          84 LVNNAGILNI--GTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRG  161 (244)
T ss_dssp             EEECCCCCCC--BCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCcccCC--CchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHH
Confidence            9999998765  68899999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|.++.|++++|||||+|+||+|.||+.......         ....+.+|+.+|+|+|++++||+|++++++|||+|.
T Consensus       162 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---------~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~i~  232 (244)
T d1nffa_         162 LTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED---------IFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEFV  232 (244)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT---------CSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH---------HHhccccCCCCHHHHHHHHHHHhChhhCCCcCCEEE
Confidence            99999999999999999999999999987643211         011345889999999999999999999999999999


Q ss_pred             eCCCcccC
Q 044670          241 VDGGFSVA  248 (302)
Q Consensus       241 ~~gG~~~~  248 (302)
                      +|||+...
T Consensus       233 vDGG~~ag  240 (244)
T d1nffa_         233 VDGGTVAG  240 (244)
T ss_dssp             ESTTGGGS
T ss_pred             ECCCeecc
Confidence            99998754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.9e-54  Score=370.54  Aligned_cols=240  Identities=27%  Similarity=0.406  Sum_probs=216.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            58999999999999999999999999999999999999888777665   467899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.++..+.++..+|++||+|
T Consensus        88 iDilvnnag~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa  165 (251)
T d2c07a1          88 VDILVNNAGITRD--NLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAG  165 (251)
T ss_dssp             CCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             ceeeeeccccccc--cccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHH
Confidence            9999999998765  68888999999999999999999999999999998889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +++|+|+++.|++++|||||+|+||+|.|++....  .++..+.+... . |.+|+.+|+|+|++++||+|+.++++|||
T Consensus       166 l~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~-~-pl~R~~~pedvA~~v~fL~S~~s~~itG~  241 (251)
T d2c07a1         166 VIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISN-I-PAGRMGTPEEVANLACFLSSDKSGYINGR  241 (251)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCchhCCCcCc
Confidence            99999999999999999999999999999998654  34544444444 2 34899999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      +|.+|||++
T Consensus       242 ~i~vDGG~s  250 (251)
T d2c07a1         242 VFVIDGGLS  250 (251)
T ss_dssp             EEEESTTSC
T ss_pred             EEEECCCcC
Confidence            999999965

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=1.1e-53  Score=369.57  Aligned_cols=253  Identities=48%  Similarity=0.783  Sum_probs=226.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.++++  ..+.++.+|++|+++++++++++.+++|++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            689999999999999999999999999999999999999988888774  468889999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCC-hhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGS-PAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~-~~Y~~sK~a  157 (302)
                      |+||||||........+.+.+.++|++++++|+.|+++++++++|+|.+++.|+||++||.++..+.++. ..|++||+|
T Consensus        84 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaa  163 (268)
T d2bgka1          84 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHA  163 (268)
T ss_dssp             CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHH
T ss_pred             ceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHH
Confidence            9999999987653345778899999999999999999999999999998889999999999988876654 589999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +++|+|.++.||+++|||||+|+||+|.||+...... .+...+........+.+|+.+|+|+|++++||+|++++++||
T Consensus       164 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG  243 (268)
T d2bgka1         164 VLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYVSG  243 (268)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCccC
Confidence            9999999999999999999999999999999876543 344445555554556689999999999999999999999999


Q ss_pred             cEEeeCCCcccCCCCcc
Q 044670          237 LNLVVDGGFSVANPSLM  253 (302)
Q Consensus       237 ~~~~~~gG~~~~~~~~~  253 (302)
                      |+|.+|||++...|.++
T Consensus       244 q~i~VDGG~t~~~p~~p  260 (268)
T d2bgka1         244 LNLVIDGGYTRTNPAFP  260 (268)
T ss_dssp             CEEEESTTGGGCCTHHH
T ss_pred             ceEEECcCcccCCCCCh
Confidence            99999999998877553

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=3.2e-54  Score=370.38  Aligned_cols=245  Identities=27%  Similarity=0.422  Sum_probs=216.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++++++..+++     +.++.++++|++|+++++++++++.+++
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            68999999999999999999999999999999999998877665544     3578899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      |++|+||||||+... ..++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||
T Consensus        82 G~iDiLVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          82 GRIDGFFNNAGIEGK-QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             SCCSEEEECCCCCCC-CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             CCCCEEEECCccccc-CCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence            999999999997643 2578889999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC-----CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS-----INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +|+.+|++.++.|++++|||||+|+||+|.||+.....     ...+...+.+... .|.+|+.+|+|+|++++||+|+.
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~pl~R~~~p~dvA~~v~fL~S~~  239 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQV-NPSKRYGEAPEIAAVVAFLLSDD  239 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTT-CTTCSCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhc-CCCCCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999864321     1122222222222 23489999999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ++++|||+|.+|||++.
T Consensus       240 s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         240 ASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             hcCCcCceEEcCcchhc
Confidence            99999999999999864

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3.5e-54  Score=371.06  Aligned_cols=244  Identities=32%  Similarity=0.466  Sum_probs=210.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHH----HhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALAC----KLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~----~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++ +.++++.+    ..+.++.++++|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999975 44444433    336788999999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      |++|+||||||+...  .++.+.+.++|+++|++|+.++++++++++|+|++++.|+||++||.++..+.+++.+|++||
T Consensus        82 G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1x1ta1          82 GRIDILVNNAGIQHT--ALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAK  159 (260)
T ss_dssp             SCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCcEEEeecccccC--CchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhh
Confidence            999999999998765  688999999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---------HHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---------PAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      +|++.|++.++.|++++||+||+|+||+|.||+.......         .....+.+.... |.+|+.+|+|+|++++||
T Consensus       160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Pl~R~g~pediA~~v~fL  238 (260)
T d1x1ta1         160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ-PSLQFVTPEQLGGTAVFL  238 (260)
T ss_dssp             HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHC-TTCCCBCHHHHHHHHHHH
T ss_pred             hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC-CCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999987654211         111112222323 348999999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+.++++|||+|.+|||++.
T Consensus       239 ~S~~a~~itG~~i~vDGG~ta  259 (260)
T d1x1ta1         239 ASDAAAQITGTTVSVDGGWTA  259 (260)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hChhhCCCcCCEEEECcchhc
Confidence            999999999999999999863

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.8e-54  Score=369.16  Aligned_cols=243  Identities=30%  Similarity=0.416  Sum_probs=219.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+.++++.++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            68999999999999999999999999999999999999999999999989999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++++++|+.|+++++++++|.|.++ ..|+||++||.++..+.++..+|++||+|++
T Consensus        83 lVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  160 (256)
T d1k2wa_          83 LVNNAALFDL--APIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVI  160 (256)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred             EEeecccccc--cccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHH
Confidence            9999998765  688999999999999999999999999999986554 4799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      .|++.++.|++++|||||+|+||++.||+.....         ..++..+.+... . |.+|+.+|+|+|++++||+|++
T Consensus       161 ~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-PlgR~~~p~evA~~v~fL~S~~  238 (256)
T d1k2wa_         161 SLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA-V-PFGRMGRAEDLTGMAIFLATPE  238 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH-S-TTSSCBCHHHHHHHHHHTTSGG
T ss_pred             HHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999864321         112222333332 2 3499999999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ++++|||.|.+|||.++
T Consensus       239 a~~iTG~~i~vDGG~~m  255 (256)
T d1k2wa_         239 ADYIVAQTYNVDGGNWM  255 (256)
T ss_dssp             GTTCCSCEEEESTTSSC
T ss_pred             hCCccCceEEECcchhh
Confidence            99999999999999775

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.5e-54  Score=366.71  Aligned_cols=241  Identities=32%  Similarity=0.430  Sum_probs=213.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++..+ ..+..+  ..++++|++|+++++++++++.+++|++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999999987654 444544  467899999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||+|++.
T Consensus        80 LVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~  157 (248)
T d2d1ya1          80 LVNNAAIAAP--GSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVN  157 (248)
T ss_dssp             EEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHH
T ss_pred             EEEeCcCCCC--CChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHH
Confidence            9999998765  68899999999999999999999999999999999889999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      |+|.++.|++++|||||+|+||+|.||+......   .++...+......| .+|+.+|+|+|++++||+|+.++++|||
T Consensus       158 ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p-l~R~~~pedia~~v~fL~S~~s~~itG~  236 (248)
T d2d1ya1         158 LTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHA-LRRLGKPEEVAEAVLFLASEKASFITGA  236 (248)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTST-TSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhCchhcCCCCc
Confidence            9999999999999999999999999998654221   12222233333333 4899999999999999999999999999


Q ss_pred             EEeeCCCccc
Q 044670          238 NLVVDGGFSV  247 (302)
Q Consensus       238 ~~~~~gG~~~  247 (302)
                      .|.+|||++.
T Consensus       237 ~i~vDGG~ta  246 (248)
T d2d1ya1         237 ILPVDGGMTA  246 (248)
T ss_dssp             EEEESTTGGG
T ss_pred             EEEcCcCccc
Confidence            9999999864

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-53  Score=366.71  Aligned_cols=240  Identities=33%  Similarity=0.453  Sum_probs=218.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++++|++|+++++++++++.+++|+
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999998888776655   578899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||....  .++ +.+.++|++++++|+.+++++++.++|+|.+++.++||++||.++..+.+++.+|++||+|
T Consensus        89 iDilvnnAG~~~~--~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaa  165 (255)
T d1fmca_          89 VDILVNNAGGGGP--KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAA  165 (255)
T ss_dssp             CCEEEECCCCCCC--CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCEeeeCCcCCCC--Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHH
Confidence            9999999998764  344 7899999999999999999999999999999889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      +++|+|+++.|++++|||||+|+||+|.|++..... .++..+.+.+..  |.+|+.+|+|+|++++||+|+.++++|||
T Consensus       166 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~--pl~R~g~pedvA~~v~fL~S~~s~~itG~  242 (255)
T d1fmca_         166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHT--PIRRLGQPQDIANAALFLCSPAASWVSGQ  242 (255)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTC--SSCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            999999999999999999999999999999886553 455555554442  34899999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 044670          238 NLVVDGGFS  246 (302)
Q Consensus       238 ~~~~~gG~~  246 (302)
                      +|.+|||..
T Consensus       243 ~i~vDGG~~  251 (255)
T d1fmca_         243 ILTVSGGGV  251 (255)
T ss_dssp             EEEESTTSC
T ss_pred             EEEECcCcc
Confidence            999999975

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.5e-53  Score=361.47  Aligned_cols=238  Identities=33%  Similarity=0.479  Sum_probs=215.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++++++..+.++  .+++.+|++|+++++++++++.+++|++|+
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   80 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVADPASVERGFAEALAHLGRLDG   80 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            689999999999999999999999999999999999999888877664  578999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.++|+++||. +..+.++..+|++||+|+++
T Consensus        81 lVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~-~~~~~~~~~~Y~asKaal~~  157 (242)
T d1ulsa_          81 VVHYAGITRD--NFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASR-VYLGNLGQANYAASMAGVVG  157 (242)
T ss_dssp             EEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCG-GGGCCTTCHHHHHHHHHHHH
T ss_pred             EEECCccccc--CchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccc-cccCCCCCcchHHHHHHHHH
Confidence            9999998765  68889999999999999999999999999999998888888887775 56788899999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|+++.|++++|||||+|+||+|.|++....  .+...+.+... . |.+|+.+|+|+|++++||+|++++++||++|.
T Consensus       158 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~-~-pl~R~~~pedia~~v~fL~S~~s~~itG~~i~  233 (242)
T d1ulsa_         158 LTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAA-T-PLGRAGKPLEVAYAALFLLSDESSFITGQVLF  233 (242)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHT-C-TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHhchhhCCCCCcEEE
Confidence            99999999999999999999999999998754  34444444443 2 34899999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+++
T Consensus       234 vDGG~t~  240 (242)
T d1ulsa_         234 VDGGRTI  240 (242)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccC
Confidence            9999875

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=4.4e-54  Score=369.96  Aligned_cols=244  Identities=32%  Similarity=0.465  Sum_probs=217.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+ .++++.++   .+.++.++++|++|+++++++++++.+++|
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999999864 45544443   357789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||+...  .++.+.+.++|++++++|+.++++++++++|+|.+++.+ +||++||.++..+.++..+|++||
T Consensus        85 ~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asK  162 (261)
T d1geea_          85 KLDVMINNAGLENP--VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASK  162 (261)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEeeccceecCC--cchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCC
Confidence            99999999998765  688899999999999999999999999999999877654 599999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +|++.|+++++.|++++|||||+|+||+|.||+.......++..+.+... . |.+|+.+|+|+|++++||+|+.++++|
T Consensus       163 aal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~-~-pl~R~~~pediA~~v~fL~S~~s~~it  240 (261)
T d1geea_         163 GGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESM-I-PMGYIGEPEEIAAVAAWLASSEASYVT  240 (261)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             ccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhc-C-CCCCCCCHHHHHHHHHHHhCchhcCCc
Confidence            99999999999999999999999999999999876543334444443333 2 348999999999999999999999999


Q ss_pred             ccEEeeCCCcccC
Q 044670          236 GLNLVVDGGFSVA  248 (302)
Q Consensus       236 G~~~~~~gG~~~~  248 (302)
                      ||+|.+|||+++.
T Consensus       241 G~~i~vDGG~sl~  253 (261)
T d1geea_         241 GITLFADGGMTLY  253 (261)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCeEEECCCeeCC
Confidence            9999999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.6e-54  Score=370.27  Aligned_cols=246  Identities=25%  Similarity=0.350  Sum_probs=194.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-G   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   76 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++.+|++++++++++++++.+++ |
T Consensus         6 LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   85 (259)
T d1xq1a_           6 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   85 (259)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999998888776655   4678999999999999999999999998 6


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+..+.++..+|++||+
T Consensus        86 ~idilvnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          86 KLDILINNLGAIRS--KPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             CCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CcccccccccccCC--CchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence            89999999998765  6889999999999999999999999999999999888999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      |++.|+|+++.|++++|||||+|+||+|.||+...... ++..+..... . |.+|+.+|+|+|++++||+|+.++++||
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~-~-pl~R~~~pedvA~~v~fL~S~~s~~iTG  240 (259)
T d1xq1a_         164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISR-K-PLGRFGEPEEVSSLVAFLCMPAASYITG  240 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------CCGGGGHHHHHHHTSGGGTTCCS
T ss_pred             chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhC-C-CCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            99999999999999999999999999999998865432 2222222222 2 3489999999999999999999999999


Q ss_pred             cEEeeCCCcccCCCC
Q 044670          237 LNLVVDGGFSVANPS  251 (302)
Q Consensus       237 ~~~~~~gG~~~~~~~  251 (302)
                      ++|.+|||+++....
T Consensus       241 ~~i~vDGG~s~~g~~  255 (259)
T d1xq1a_         241 QTICVDGGLTVNGFS  255 (259)
T ss_dssp             CEEECCCCEEETTEE
T ss_pred             cEEEeCCCEECCCCC
Confidence            999999999876543

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.2e-54  Score=371.73  Aligned_cols=242  Identities=36%  Similarity=0.470  Sum_probs=219.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.++.++.+|++|+++++++++++.+++|++|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            68999999999999999999999999999999999999999998888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||+|++.
T Consensus        83 lVnnAg~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~  160 (254)
T d1hdca_          83 LVNNAGISTG--MFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRG  160 (254)
T ss_dssp             EEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEecCccccc--cccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHH
Confidence            9999998765  68899999999999999999999999999999998889999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCC-CHHHHHHHHHHhccCCCCCccccEE
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL-NAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      |+|+++.|++++|||||+|+||+|.|++.......  ..+.....  .+.+|+. .|+|+|++++||+|+.++++|||+|
T Consensus       161 lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~~--~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i  236 (254)
T d1hdca_         161 LSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPN--TPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL  236 (254)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTT--STTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH--HHHHHHhC--CCCCCCCCCHHHHHHHHHHHhchhhCCCCCceE
Confidence            99999999999999999999999999986543211  11111111  2347776 6999999999999999999999999


Q ss_pred             eeCCCcccC
Q 044670          240 VVDGGFSVA  248 (302)
Q Consensus       240 ~~~gG~~~~  248 (302)
                      .+|||++..
T Consensus       237 ~vDGG~t~g  245 (254)
T d1hdca_         237 AVDGGWTTG  245 (254)
T ss_dssp             EESTTTTTS
T ss_pred             EeCCCccCC
Confidence            999998764

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2.1e-53  Score=364.07  Aligned_cols=242  Identities=32%  Similarity=0.461  Sum_probs=218.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.++++.++++  .++.++.+|++|+++++++++++.+++|++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            689999999999999999999999999999999999998888877763  678999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCC-EEEEEcCcccccCCCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKG-CILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      |+||||||....  .++.+.+.++|+++|++|+.++++++++++|+|++++.| +||++||.++..+.++..+|++||+|
T Consensus        84 DiLVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaa  161 (251)
T d1zk4a1          84 STLVNNAGIAVN--KSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGA  161 (251)
T ss_dssp             CEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             eEEEeccccccc--cchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHH
Confidence            999999998775  689999999999999999999999999999999887754 89999999999999999999999999


Q ss_pred             HHHHHHHHHHH--HCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          158 IIALVKILAAE--LRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       158 ~~~~~~~la~e--~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      +++|++.++.|  ++++|||||+|+||+|.|++...... ++.......  ..|.+|+.+|+|+|++++||+|+.++++|
T Consensus       162 l~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~--~~pl~R~~~pedvA~~v~fL~S~~s~~it  238 (251)
T d1zk4a1         162 VRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRT--KTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTT--TCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHh--CCCCCCCcCHHHHHHHHHHHhCchhCCCc
Confidence            99999999998  56899999999999999999876532 222222222  23458999999999999999999999999


Q ss_pred             ccEEeeCCCccc
Q 044670          236 GLNLVVDGGFSV  247 (302)
Q Consensus       236 G~~~~~~gG~~~  247 (302)
                      |+.|.+|||++.
T Consensus       239 G~~i~vDGG~ta  250 (251)
T d1zk4a1         239 GSEFVVDGGYTA  250 (251)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECccccc
Confidence            999999999863

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.2e-53  Score=365.53  Aligned_cols=244  Identities=25%  Similarity=0.333  Sum_probs=219.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC-
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG-   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++++++++.+++   +.++.++.+|++|+++++++++++.++++ 
T Consensus         6 L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           6 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999999888776665   46788999999999999999999999986 


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++.++|+|.+++.|+||++||..+..+.++...|++||+
T Consensus        86 ~idilvnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d2ae2a_          86 KLNILVNNAGIVIY--KEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKG  163 (259)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CceEEEECCceecc--CccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHH
Confidence            79999999998765  6889999999999999999999999999999999988999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHH---HHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA---ILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      |++.|+|+++.|++++|||||+|+||+|.|++.......+.   ..+.+...  .|.+|+.+|+|+|++++||+|+.+++
T Consensus       164 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~pl~R~g~pedvA~~v~fL~S~~s~~  241 (259)
T d2ae2a_         164 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR--CALRRMGEPKELAAMVAFLCFPAASY  241 (259)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT--STTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999999999999998765443332   22233332  23489999999999999999999999


Q ss_pred             ccccEEeeCCCcccC
Q 044670          234 VTGLNLVVDGGFSVA  248 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~  248 (302)
                      +|||+|.+|||+...
T Consensus       242 itG~~i~VDGG~~a~  256 (259)
T d2ae2a_         242 VTGQIIYVDGGLMAN  256 (259)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCcEEEECCCeEee
Confidence            999999999998753

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=2.9e-53  Score=365.13  Aligned_cols=242  Identities=33%  Similarity=0.485  Sum_probs=217.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999998888776665   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|+||||||.... ..++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.++..+.+++.+|++||+|
T Consensus        83 iDilVnnaG~~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  161 (260)
T d1zema1          83 IDFLFNNAGYQGA-FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGA  161 (260)
T ss_dssp             CCEEEECCCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred             CCeehhhhccccc-cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHH
Confidence            9999999997643 257889999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC-------------CCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSR-------------NSINPAILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      +++|+|.++.|++++|||||+|+||+|.|++...             ....++...+.+....| .+|+.+|+|+|++++
T Consensus       162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l~R~g~pedvA~~v~  240 (260)
T d1zema1         162 IIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP-MRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST-TSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCC-CCCCcCHHHHHHHHH
Confidence            9999999999999999999999999999997522             11233333333333333 489999999999999


Q ss_pred             HhccCCCCCccccEEeeCCC
Q 044670          225 YLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG  244 (302)
                      ||+|+.++++|||+|.+|||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.2e-53  Score=365.42  Aligned_cols=241  Identities=27%  Similarity=0.377  Sum_probs=215.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.++.++.+|++|+++++++++++.+++|++
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4899999999999999999999999999999999998888776655   5688999999999999999999999999999


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh--hccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV--MIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      |+||||||+...  .++.+.+.++|++++++|+.++++++++++|+  |.+++.++||+++|..+..+.+++.+|++||+
T Consensus        81 DilVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKa  158 (257)
T d2rhca1          81 DVLVNNAGRPGG--GATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKH  158 (257)
T ss_dssp             SEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEecccccCC--CChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHH
Confidence            999999998765  68889999999999999999999999999997  44566789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC--------CC-CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN--------SI-NPAILEAFLSEMGNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  227 (302)
                      |+++|+|+++.|++++|||||+|+||+|.||+....        .. .++..+.+... . |.+|+.+|+|+|++++||+
T Consensus       159 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~-~-PlgR~~~pedia~~v~fL~  236 (257)
T d2rhca1         159 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITAR-V-PIGRYVQPSEVAEMVAYLI  236 (257)
T ss_dssp             HHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTT-S-TTSSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999986432        11 22333333333 2 3499999999999999999


Q ss_pred             cCCCCCccccEEeeCCCcc
Q 044670          228 TDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~  246 (302)
                      |+.++++|||+|.+|||.+
T Consensus       237 S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         237 GPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CchhcCCcCceEEECcCcc
Confidence            9999999999999999964

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.4e-53  Score=360.39  Aligned_cols=233  Identities=24%  Similarity=0.387  Sum_probs=203.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+..        .++..+.+|++|+++++++++++.+++|++|+
T Consensus         5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   76 (237)
T d1uzma1           5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP--------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEV   76 (237)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh--------cCceEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence            6899999999999999999999999999999999987654        34578999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||+...  .++.+.+.++|++++++|+.+++++++.++|+|.+++.|+||++||.++..+.++..+|++||+|++.
T Consensus        77 LVnnAG~~~~--~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  154 (237)
T d1uzma1          77 LVSNAGLSAD--AFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIG  154 (237)
T ss_dssp             EEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHH
T ss_pred             EEeeeccccc--ccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHH
Confidence            9999998765  68899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|.++.|++++|||||+|+||+|+|++....  .+...+... ...| .+|+.+|+|+|++++||+|++++++|||+|.
T Consensus       155 lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~-~~~p-l~R~~~pedvA~~v~fL~S~~s~~itG~~i~  230 (237)
T d1uzma1         155 MARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGAL-QFIP-AKRVGTPAEVAGVVSFLASEDASYISGAVIP  230 (237)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHG-GGCT-TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHH-hcCC-CCCCcCHHHHHHHHHHHhCchhcCCcCCeEE
Confidence            99999999999999999999999999987654  333333333 3333 4999999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||..+
T Consensus       231 vdGG~~m  237 (237)
T d1uzma1         231 VDGGMGM  237 (237)
T ss_dssp             ESTTTTC
T ss_pred             ECCCCCC
Confidence            9999753

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-53  Score=360.85  Aligned_cols=241  Identities=30%  Similarity=0.490  Sum_probs=214.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.++++.++++ +..++.+|++|+++++++++++.+++|++|+
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP-GAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT-TEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            689999999999999999999999999999999999999988887764 5788999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||.... ..++.+.+.++|++++++|+.++++++++++|+|+++ .|+||++||.++..+.++..+|++||+|++.
T Consensus        83 lVnnAG~~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~  160 (250)
T d1ydea1          83 VVNNAGHHPP-PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA  160 (250)
T ss_dssp             EEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred             EEeccccccc-ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHH
Confidence            9999997643 2467789999999999999999999999999999764 5999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---C-HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---N-PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      |+|+++.|++++|||||+|+||+|.||+......   . .+..++....  .|.+|+.+|+|+|++++||+|+ ++++||
T Consensus       161 lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~pl~R~g~p~eva~~v~fL~Sd-a~~itG  237 (250)
T d1ydea1         161 MTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA--QPLGRMGQPAEVGAAAVFLASE-ANFCTG  237 (250)
T ss_dssp             HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT--STTSSCBCHHHHHHHHHHHHHH-CTTCCS
T ss_pred             HHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhc--CCCCCCCCHHHHHHHHHHHhCc-cCCCcC
Confidence            9999999999999999999999999998654211   1 2233333333  2458999999999999999997 789999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      |+|.+|||+++
T Consensus       238 ~~i~vDGG~~l  248 (250)
T d1ydea1         238 IELLVTGGAEL  248 (250)
T ss_dssp             CEEEESTTTTS
T ss_pred             CeEEECCCccc
Confidence            99999999875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.7e-53  Score=360.19  Aligned_cols=238  Identities=29%  Similarity=0.449  Sum_probs=213.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEe-cCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIAD-VQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~-r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||||||++|||++++++|+++|++|++.+ |+++.++++.++   .+.++.++.+|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999875 455556555444   367889999999999999999999999999999


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||....  .++.+.+.++|++++++|+.++++++++++|+|.+++.|+||++||.++..+.++..+|++||+|++
T Consensus        82 iLVnnAg~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~  159 (244)
T d1edoa_          82 VVVNNAGITRD--TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             EEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             ccccccccccc--cchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHH
Confidence            99999998765  6889999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc-cCCCCCccccE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA-TDEASDVTGLN  238 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~-s~~~~~~~G~~  238 (302)
                      +|+|.++.|++++|||||+|+||++.|++....  .++..+.+... . |.+|+.+|+|+|++++||+ |+.++++|||+
T Consensus       160 ~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~-~-pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~  235 (244)
T d1edoa_         160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGT-I-PLGRTGQPENVAGLVEFLALSPAASYITGQA  235 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTS-C-TTCSCBCHHHHHHHHHHHHHCSGGGGCCSCE
T ss_pred             HChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhc-C-CCCCCcCHHHHHHHHHHHHCCchhcCCcCCe
Confidence            999999999999999999999999999988764  34444444333 2 3489999999999999996 89999999999


Q ss_pred             EeeCCCccc
Q 044670          239 LVVDGGFSV  247 (302)
Q Consensus       239 ~~~~gG~~~  247 (302)
                      |.+|||+++
T Consensus       236 i~vdGG~si  244 (244)
T d1edoa_         236 FTIDGGIAI  244 (244)
T ss_dssp             EEESTTTTC
T ss_pred             EEeCCCeeC
Confidence            999999864

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=4e-53  Score=362.54  Aligned_cols=242  Identities=32%  Similarity=0.487  Sum_probs=216.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++++++++.++++.+..++.+|++|+++++++++++.+++|++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            68999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|+++ .|+||++||.++..+.+++.+|++||+|++.
T Consensus        84 lVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (253)
T d1hxha_          84 LVNNAGILLP--GDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSA  160 (253)
T ss_dssp             EEECCCCCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccCC--CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHH
Confidence            9999998765  688899999999999999999999999999999754 6999999999999999999999999999999


Q ss_pred             HHHHHHHHHCC--CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc--ccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          161 LVKILAAELRQ--YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG--NLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       161 ~~~~la~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      |+|.++.|+++  +|||||+|+||+|.|++........ ..++......  .+.+|+.+|+|+|++++||+|++++++||
T Consensus       161 lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~itG  239 (253)
T d1hxha_         161 LTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG-VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSG  239 (253)
T ss_dssp             HHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT-CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcch-hhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCCcC
Confidence            99999999987  4699999999999999865432111 1112222211  23478999999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 044670          237 LNLVVDGGFS  246 (302)
Q Consensus       237 ~~~~~~gG~~  246 (302)
                      |.|.+|||+.
T Consensus       240 ~~i~VDGG~~  249 (253)
T d1hxha_         240 SELHADNSIL  249 (253)
T ss_dssp             CEEEESSSCT
T ss_pred             cEEEECccHh
Confidence            9999999975

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.4e-52  Score=357.52  Aligned_cols=240  Identities=26%  Similarity=0.390  Sum_probs=213.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++|||||++|||+++|++|+++|++|++++|++++++++.+++   +.++.++.+|++|+++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            67899999999999999999999999999999999888776655   578899999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|.+++ .++||++||.++..+.++...|++||+|++
T Consensus        82 lVnnAG~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~  159 (255)
T d1gega_          82 IVNNAGVAPS--TPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  159 (255)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEeccccccc--CcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHH
Confidence            9999998765  6889999999999999999999999999999876654 678999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---------CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---------INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +|+|+++.|++++|||||+|+||+|.||+.....         ........+.+.  .|.+|+.+|+|+|++++||+|+.
T Consensus       160 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~pl~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         160 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKR--ITLGRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTT--CTTCSCBCHHHHHHHHHHHHSGG
T ss_pred             hhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999864321         011222222222  23489999999999999999999


Q ss_pred             CCCccccEEeeCCCccc
Q 044670          231 ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~  247 (302)
                      ++++||+.|.+|||+.+
T Consensus       238 a~~itG~~i~vDGG~~~  254 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVF  254 (255)
T ss_dssp             GTTCCSCEEEESSSSSC
T ss_pred             hCCccCcEEEecCCEEe
Confidence            99999999999999764

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.9e-52  Score=360.06  Aligned_cols=249  Identities=27%  Similarity=0.376  Sum_probs=217.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++      ..++.++.+|++|+++++++++++.++
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999998888776665      136889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      +|++|+||||||.......+..+.+.++|++++++|+.++++++++++|+|.+++.++|+++||.++..+.+++.+|++|
T Consensus        82 ~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~as  161 (274)
T d1xhla_          82 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA  161 (274)
T ss_dssp             HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred             cCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhh
Confidence            99999999999976543345566788999999999999999999999999998888999999998888899999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH---HHHHHHhc--cccCCCCCCHHHHHHHHHHhccC
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI---LEAFLSEM--GNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      |+|+++|+|.++.|++++|||||+|+||+|.||+..........   ...+....  ..|.+|+.+|+|+|++++||+|+
T Consensus       162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S~  241 (274)
T d1xhla_         162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLADR  241 (274)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHCH
T ss_pred             hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999987665433322   22222221  23459999999999999999995


Q ss_pred             -CCCCccccEEeeCCCcccCC
Q 044670          230 -EASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       230 -~~~~~~G~~~~~~gG~~~~~  249 (302)
                       .++++|||+|.+|||+++..
T Consensus       242 d~s~~itG~~i~vDGG~~l~~  262 (274)
T d1xhla_         242 NLSSYIIGQSIVADGGSTLVM  262 (274)
T ss_dssp             HHHTTCCSCEEEESTTGGGCC
T ss_pred             ccccCccCcEEEeCcCHHHhc
Confidence             68899999999999998754

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-52  Score=352.74  Aligned_cols=237  Identities=26%  Similarity=0.386  Sum_probs=214.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.++++ .+..+.+|++|++++++++    +++|++|+
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~d~~~v~~~~----~~~g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP-GIEPVCVDLGDWEATERAL----GSVGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHhCCceE
Confidence            589999999999999999999999999999999999999988888775 5788999999999976655    46799999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhc-cCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMI-PQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.++|.|. ++..|+||++||.++..+.++..+|++||+|++
T Consensus        80 lVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~  157 (244)
T d1pr9a_          80 LVNNAAVALL--QPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD  157 (244)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEeccccccc--cchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHH
Confidence            9999998765  6889999999999999999999999999999764 456799999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .|+|.++.|++++|||||+|+||+|.|++...........+.+....  |.+|+.+|+|+|++++||+|+.++++|||+|
T Consensus       158 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~--pl~R~~~peevA~~v~fL~S~~a~~itG~~i  235 (244)
T d1pr9a_         158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI--PLGKFAEVEHVVNAILFLLSDRSGMTTGSTL  235 (244)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTC--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCchhCCcCCcEE
Confidence            99999999999999999999999999999877665555555554443  3489999999999999999999999999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||+.
T Consensus       236 ~vDGG~~  242 (244)
T d1pr9a_         236 PVEGGFW  242 (244)
T ss_dssp             EESTTGG
T ss_pred             EECccHh
Confidence            9999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.4e-52  Score=352.37  Aligned_cols=237  Identities=26%  Similarity=0.366  Sum_probs=213.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++++++++.++++ .+.++.+|++|++++++++    +++|++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~Dv~~~~~v~~~~----~~~g~iDi   77 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP-GIEPVCVDLGDWDATEKAL----GGIGPVDL   77 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST-TCEEEECCTTCHHHHHHHH----TTCCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHH----HHcCCCeE
Confidence            589999999999999999999999999999999999999888887774 5788999999999976655    56799999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||+...  .++.+.+.++|++++++|+.+++++++.+.|.|.+ +..|+||++||.++..+.++..+|++||+|++
T Consensus        78 lVnnAg~~~~--~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~  155 (242)
T d1cyda_          78 LVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT  155 (242)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEECCccccc--hhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHH
Confidence            9999998765  68999999999999999999999999999998654 45789999999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEE
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNL  239 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~  239 (302)
                      .|+|.++.|++++|||||+|+||++.|++.......++..+.+....  |.+|+.+|+|+|++++||+|+.++++|||+|
T Consensus       156 ~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--pl~R~~~peeva~~v~fL~S~~s~~itG~~i  233 (242)
T d1cyda_         156 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH--PLRKFAEVEDVVNSILFLLSDRSASTSGGGI  233 (242)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS--TTSSCBCHHHHHHHHHHHHSGGGTTCCSSEE
T ss_pred             HHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhCchhcCcCCceE
Confidence            99999999999999999999999999998876655566655555543  3489999999999999999999999999999


Q ss_pred             eeCCCcc
Q 044670          240 VVDGGFS  246 (302)
Q Consensus       240 ~~~gG~~  246 (302)
                      .+|||+.
T Consensus       234 ~vDGG~~  240 (242)
T d1cyda_         234 LVDAGYL  240 (242)
T ss_dssp             EESTTGG
T ss_pred             EeCcchh
Confidence            9999975

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.9e-51  Score=353.00  Aligned_cols=245  Identities=25%  Similarity=0.347  Sum_probs=216.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc-C
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY-G   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.++++.+++   +..++++.+|++++++++++++++.+++ +
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            68999999999999999999999999999999999998877776655   5678899999999999999999999998 6


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.+++++++++.|.|.+++.|+||++||.++..+.+++..|+++|+
T Consensus        84 ~idilinnag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          84 KLNILVNNAGVVIH--KEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             CCCEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CcEEEecccccccc--CccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence            89999999998775  6889999999999999999999999999999999989999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC----CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      |+++|+|.+++|++++|||||+|+||+++||+......    ..+..+.+....  |.+|+.+|+|+|++++||+|++++
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--plgR~~~pediA~~v~fL~S~~s~  239 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT--PMGRAGKPQEVSALIAFLCFPAAS  239 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHS--TTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC--CCCCCcCHHHHHHHHHHHhChhhC
Confidence            99999999999999999999999999999998765432    234444444432  348999999999999999999999


Q ss_pred             CccccEEeeCCCcccCC
Q 044670          233 DVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       233 ~~~G~~~~~~gG~~~~~  249 (302)
                      ++||+.|.+|||++...
T Consensus       240 ~itG~~i~vDGG~s~~g  256 (258)
T d1ae1a_         240 YITGQIIWADGGFTANG  256 (258)
T ss_dssp             TCCSCEEEESTTGGGCS
T ss_pred             CCcCcEEEeCCCeeccC
Confidence            99999999999988643

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=7.2e-52  Score=357.34  Aligned_cols=245  Identities=30%  Similarity=0.373  Sum_probs=199.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||++++++|+++|++|++++|++++++++.+++      +.++.++.+|++|+++++++++++.++
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999888777665      135899999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCc-ccccCCCCChhH
Q 044670           75 YGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA-CTEIAGIGSPAY  151 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~-~~~~~~~~~~~Y  151 (302)
                      +|++|+||||||.....  ..++.+.+.++|++++++|+.++++++++++|+|++++ +++|+++|+ ++..+.++..+|
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y  161 (264)
T d1spxa_          83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYY  161 (264)
T ss_dssp             HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHH
T ss_pred             hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhh
Confidence            99999999999986421  23456678999999999999999999999999997664 566666655 467788999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHH------HHHHhccccCCCCCCHHHHHHHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILE------AFLSEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      ++||+|+++|+|+++.|++++|||||+|+||+|.|++.......++..+      ...... .|.+|+.+|+|+|++++|
T Consensus       162 ~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~Pl~R~g~pedvA~~v~f  240 (264)
T d1spxa_         162 SIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC-VPAGVMGQPQDIAEVIAF  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH-CTTSSCBCHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc-CCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999998765432221111      112222 244899999999999999


Q ss_pred             hccCC-CCCccccEEeeCCCccc
Q 044670          226 LATDE-ASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       226 l~s~~-~~~~~G~~~~~~gG~~~  247 (302)
                      |+|++ ++++|||.|.+|||+++
T Consensus       241 L~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         241 LADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HhCCcccCCccCceEEeCCChhh
Confidence            99954 78999999999999875

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-51  Score=359.85  Aligned_cols=247  Identities=30%  Similarity=0.384  Sum_probs=217.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..+++        +.++.++.+|++|+++++++++++.
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999998877766554        3578999999999999999999999


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +++|++|+||||||....  .++.+.+.++|++++++|+.++++++++++|.|.+++.++||++||. +..+.++...|+
T Consensus        90 ~~~G~iDiLVnnAg~~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~-~~~~~~~~~~Y~  166 (297)
T d1yxma1          90 DTFGKINFLVNNGGGQFL--SPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSG  166 (297)
T ss_dssp             HHHSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCC-CTTCCTTCHHHH
T ss_pred             HHhCCeEEEEeecccccc--CchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccc-ccccccccccch
Confidence            999999999999998765  68899999999999999999999999999999998888999988664 556788899999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC--HHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN--PAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      +||+|+++|+|++|.|++++|||||+|+||+|.|++.......  ++..+.....  .|.+|+.+|+|+|++++||+|+.
T Consensus       167 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--~plgR~g~pedvA~~v~fL~Sd~  244 (297)
T d1yxma1         167 AARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK--IPAKRIGVPEEVSSVVCFLLSPA  244 (297)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG--STTSSCBCTHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhc--CCCCCCcCHHHHHHHHHHHhCch
Confidence            9999999999999999999999999999999999987654321  2222222222  23489999999999999999999


Q ss_pred             CCCccccEEeeCCCcccCCCCc
Q 044670          231 ASDVTGLNLVVDGGFSVANPSL  252 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~~~~~~  252 (302)
                      ++++|||+|.+|||+++....+
T Consensus       245 s~~iTG~~i~VDGG~sl~~~~~  266 (297)
T d1yxma1         245 ASFITGQSVDVDGGRSLYTHSY  266 (297)
T ss_dssp             GTTCCSCEEEESTTGGGCBTTC
T ss_pred             hcCcCCcEEEeCcChhhhcCCC
Confidence            9999999999999999865543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2e-51  Score=355.95  Aligned_cols=248  Identities=24%  Similarity=0.329  Sum_probs=210.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++.      .++.++.+|++|+++++++++++.++
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999998888776651      35889999999999999999999999


Q ss_pred             cCCccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHH
Q 044670           75 YGKLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      +|++|+||||||.....  .....+.+.++|++++++|+.++++++++++|+|++++.+.|+++||.++..+.++...|+
T Consensus        83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~  162 (272)
T d1xkqa_          83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA  162 (272)
T ss_dssp             HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHH
T ss_pred             hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhh
Confidence            99999999999987542  1223456778999999999999999999999999876544444444567788899999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhc--cccCCCCCCHHHHHHHHHHhc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEM--GNLRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~dva~~~~~l~  227 (302)
                      +||+|+++|+|.++.|++++|||||+|+||+|.|++.......+...+..   ....  ..|.+|+.+|+|+|++++||+
T Consensus       163 asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~fL~  242 (272)
T d1xkqa_         163 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFLA  242 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999999987665444332222   2211  234589999999999999999


Q ss_pred             cCC-CCCccccEEeeCCCcccC
Q 044670          228 TDE-ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       228 s~~-~~~~~G~~~~~~gG~~~~  248 (302)
                      |++ +.++|||+|.+|||+++.
T Consensus       243 S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         243 DRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             CHHHHTTCCSCEEEESTTGGGC
T ss_pred             CcchhCCccCeEEEeCcCHHHh
Confidence            965 568999999999999875

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=1.5e-50  Score=348.23  Aligned_cols=241  Identities=27%  Similarity=0.358  Sum_probs=211.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH----hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK----LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+.+.+..++    .+.++.++.+|++|+++++++++++.+++|
T Consensus         7 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           7 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5799999999999999999999999999999999998877655443    467899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCccccc-------CCCCC
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEI-------AGIGS  148 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~-------~~~~~  148 (302)
                      ++|+||||||....  .++.+.+.++|++++++|+.|++++++.+.|+|.+ +..++|++++|.....       +.++.
T Consensus        87 ~iDilVnnAg~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~  164 (260)
T d1h5qa_          87 PISGLIANAGVSVV--KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQ  164 (260)
T ss_dssp             SEEEEEECCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSC
T ss_pred             CCcEeccccccccc--CCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccc
Confidence            99999999998765  68899999999999999999999999999999854 4567788877765543       23567


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      ..|++||+|++.|+|.++.|++++|||||+|+||+|.|++....  .++..+..... .| .+|+.+|+|+|++++||+|
T Consensus       165 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~-~p-l~R~g~pedvA~~v~fL~S  240 (260)
T d1h5qa_         165 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASN-IP-LNRFAQPEEMTGQAILLLS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHT-CT-TSSCBCGGGGHHHHHHHHS
T ss_pred             cchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHhc
Confidence            89999999999999999999999999999999999999998764  34554444443 33 4899999999999999999


Q ss_pred             CCCCCccccEEeeCCCccc
Q 044670          229 DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       229 ~~~~~~~G~~~~~~gG~~~  247 (302)
                      +.++++|||+|.+|||+.+
T Consensus       241 ~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         241 DHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             GGGTTCCSCEEEECTTGGG
T ss_pred             chhCCCcCceEEECCCeec
Confidence            9999999999999999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=7.9e-51  Score=345.91  Aligned_cols=238  Identities=32%  Similarity=0.486  Sum_probs=210.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++++..++++.++.++++|++++++++++++++.+++|++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            68999999999999999999999999999999999999999988888889999999999999999999999999999999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.+++++++.+.|+|.+  .+.|+++||.+ ..+.+++..|+++|+|+++
T Consensus        83 LinnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a-~~~~~~~~~Y~~sK~al~~  157 (241)
T d2a4ka1          83 VAHFAGVAHS--ALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVA-GLGAFGLAHYAAGKLGVVG  157 (241)
T ss_dssp             EEEGGGGTTT--TC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCT-TCCHHHHHHHHHCSSHHHH
T ss_pred             eccccccccc--cchhhhhcccccccccccccccccccccccccccc--ccceeeccccc-cccccCccccchhhHHHHH
Confidence            9999998765  68899999999999999999999999999999854  35566666554 4455788899999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |++.+++|++++|||||+|+||++.|++....  .++..+.+.+..  |.+|+.+|+|+|++++||+|+.++++||+++.
T Consensus       158 lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~--p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~  233 (241)
T d2a4ka1         158 LARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGAS--PLGRAGRPEEVAQAALFLLSEESAYITGQALY  233 (241)
T ss_dssp             HHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTS--TTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCC--CCCCCcCHHHHHHHHHHHhcchhCCCcCceEE
Confidence            99999999999999999999999999988654  455555555543  34899999999999999999999999999999


Q ss_pred             eCCCccc
Q 044670          241 VDGGFSV  247 (302)
Q Consensus       241 ~~gG~~~  247 (302)
                      +|||+++
T Consensus       234 vDGG~s~  240 (241)
T d2a4ka1         234 VDGGRSI  240 (241)
T ss_dssp             ESTTTTT
T ss_pred             eCCCccc
Confidence            9999875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=2.6e-51  Score=351.43  Aligned_cols=239  Identities=21%  Similarity=0.237  Sum_probs=211.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      |+|||||++|||+++|++|+++|++|++++|+.+..+++.....   .++.+|++|+++++++++++.+++|++|+||||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~---~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE---TYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH---HCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC---cEEEeccCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            89999999999999999999999999999999887776654321   245689999999999999999999999999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKI  164 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~  164 (302)
                      ||.... ..++.+.+.++|++.+++|+.++++++++++|+|++++.|+||++||.++..+.++..+|++||+|+++|+|.
T Consensus        79 Ag~~~~-~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~  157 (252)
T d1zmta1          79 DIFAPE-FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANA  157 (252)
T ss_dssp             CCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHH
T ss_pred             CcCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHH
Confidence            997543 2588899999999999999999999999999999988899999999999999999999999999999999999


Q ss_pred             HHHHHCCCCcEEEEEeCCcccCCcccCCCC------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccE
Q 044670          165 LAAELRQYGLRVNCVSPYGLVSGISSRNSI------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLN  238 (302)
Q Consensus       165 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (302)
                      ++.|++++|||||+|+||+|.|++......      .++..+.+.+. .| ++|+.+|+|+|++++||+|+.++++|||+
T Consensus       158 lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~-~p-l~R~g~pedvA~~v~fL~S~~s~~iTG~~  235 (252)
T d1zmta1         158 LSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV-TA-LQRLGTQKELGELVAFLASGSCDYLTGQV  235 (252)
T ss_dssp             HHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH-SS-SSSCBCHHHHHHHHHHHHTTSCGGGTTCE
T ss_pred             HHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhc-CC-CCCCcCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999999999998765432      23444444333 33 48999999999999999999999999999


Q ss_pred             EeeCCCcccCC
Q 044670          239 LVVDGGFSVAN  249 (302)
Q Consensus       239 ~~~~gG~~~~~  249 (302)
                      |.+|||+.+..
T Consensus       236 i~vdGG~~~~~  246 (252)
T d1zmta1         236 FWLAGGFPMIE  246 (252)
T ss_dssp             EEESTTCCCCC
T ss_pred             EEECCCceeCC
Confidence            99999988743

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=2.6e-50  Score=349.47  Aligned_cols=245  Identities=32%  Similarity=0.456  Sum_probs=212.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.++++.++..+.+|++++++++++++++.+++|++|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            68999999999999999999999999999999999999998888888888999999999999999999999999999999


Q ss_pred             EEEcccCCCCCC---CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           81 MYNNAGIVDRGF---ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        81 lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|||||+.....   ....+.+.+.|+++|++|+.++++++++++|+|+++ .|+||+++|.++..+.++..+|++||+|
T Consensus        83 lvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~asKaa  161 (276)
T d1bdba_          83 LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKHA  161 (276)
T ss_dssp             EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHHHHH
T ss_pred             ccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHHHHH
Confidence            999999864321   122344456799999999999999999999999765 4899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC-------CHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC-
Q 044670          158 IIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI-------NPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD-  229 (302)
Q Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~-  229 (302)
                      +++|+|+++.|++++ ||||+|+||+|.|++......       ......+...... |.+|+.+|+|+|++++||+|+ 
T Consensus       162 l~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-PlgR~g~peeva~~v~fL~S~~  239 (276)
T d1bdba_         162 IVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL-PIGRMPEVEEYTGAYVFFATRG  239 (276)
T ss_dssp             HHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTC-TTSSCCCGGGGSHHHHHHHCHH
T ss_pred             HHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC-CCCCCcCHHHHHHHHHHHcCCc
Confidence            999999999999985 999999999999998654321       1112222333333 349999999999999999984 


Q ss_pred             CCCCccccEEeeCCCcccC
Q 044670          230 EASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG~~~~  248 (302)
                      .++++|||.|.+|||+++.
T Consensus       240 ~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         240 DAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHTTCSSCEEEESSSGGGC
T ss_pred             ccCCeeCcEEEECcChhhc
Confidence            6889999999999998874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=7.3e-50  Score=343.47  Aligned_cols=244  Identities=23%  Similarity=0.259  Sum_probs=206.6

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH--hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACK--LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||+|  |||++++++|+++|++|++++|+++..+...+.  ......++.+|++|+++++++++++.+++|
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            6899999999987  999999999999999999999987655443322  245678899999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           77 KLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++|+||||||.....  ..++.+.+.++|++.+++|+.+++.+++.+.|+|.+  .|+||++||..+..+.++..+|++|
T Consensus        86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~as  163 (256)
T d1ulua_          86 GLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIA  163 (256)
T ss_dssp             SEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             CceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHHH
Confidence            999999999976421  135667889999999999999999999999999864  5899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+|+++|+|+++.||+++|||||+|+||++.|++.......++..+.+.+.. | .+|+.+|+|+|++++||+|+.++++
T Consensus       164 Kaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~-p-l~R~~~pedvA~~v~fL~S~~s~~i  241 (256)
T d1ulua_         164 KAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTA-P-LRRNITQEEVGNLGLFLLSPLASGI  241 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHS-T-TSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcC-C-CCCCcCHHHHHHHHHHHhCchhCCc
Confidence            9999999999999999999999999999999998876655555555555443 3 4899999999999999999999999


Q ss_pred             cccEEeeCCCcccC
Q 044670          235 TGLNLVVDGGFSVA  248 (302)
Q Consensus       235 ~G~~~~~~gG~~~~  248 (302)
                      |||+|.+|||+++.
T Consensus       242 tG~~i~VDGG~~~~  255 (256)
T d1ulua_         242 TGEVVYVDAGYHIM  255 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             cCCeEEECcCEeCc
Confidence            99999999999864

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.1e-50  Score=341.00  Aligned_cols=231  Identities=22%  Similarity=0.269  Sum_probs=203.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.+++.      ...++.+|+++.      ++.+.++++++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~------~~~~~~~Dv~~~------~~~~~~~~g~iD~   69 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS------GHRYVVCDLRKD------LDLLFEKVKEVDI   69 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT------CSEEEECCTTTC------HHHHHHHSCCCSE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc------CCcEEEcchHHH------HHHHHHHhCCCcE
Confidence            7899999999999999999999999999999999987655432      346788999863      5567778899999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||....  .++.+.+.++|++++++|+.++++++++++|+|++++.|+||+++|..+..+.++...|++||+|++.
T Consensus        70 lVnnAG~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~  147 (234)
T d1o5ia_          70 LVLNAGGPKA--GFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTG  147 (234)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccCC--cchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHH
Confidence            9999998664  68889999999999999999999999999999998888999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          161 LVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                      |+|.+++|++++|||||+|+||++.|++..... .+...+.+ .... |.+|+.+|+|+|++++||+|++++++|||+|.
T Consensus       148 ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~-~~~~~~~~-~~~~-pl~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         148 FLKTLSFEVAPYGITVNCVAPGWTETERVKELL-SEEKKKQV-ESQI-PMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS-CHHHHHHH-HTTS-TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHhcccCeEEeecccCccchhhhhhhc-CHHHHHHH-HhcC-CCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            999999999999999999999999999876543 23333333 3333 34899999999999999999999999999999


Q ss_pred             eCCCcccC
Q 044670          241 VDGGFSVA  248 (302)
Q Consensus       241 ~~gG~~~~  248 (302)
                      +|||++..
T Consensus       225 vDGG~s~~  232 (234)
T d1o5ia_         225 VDGGLSKF  232 (234)
T ss_dssp             ESTTCCCC
T ss_pred             ECcccccC
Confidence            99998743

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=7.2e-49  Score=337.63  Aligned_cols=240  Identities=25%  Similarity=0.398  Sum_probs=206.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||+||||||++|||++++++|+++|++|++++++. +..+.+.++   .+.++.++.+|++|+++++++++++.+++|
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            6899999999999999999999999999999876554 444554444   367899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCccc-ccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACT-EIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~-~~~~~~~~~Y~~sK  155 (302)
                      ++|++|||||....  .++.+.+.++|++++++|+.++++++++++|+|++  .+++++++|..+ ..+.+++..|++||
T Consensus        84 ~idilinnag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~~iii~s~~~~~~~~~~~~~Y~asK  159 (259)
T d1ja9a_          84 GLDFVMSNSGMEVW--CDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSK  159 (259)
T ss_dssp             CEEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHHH
T ss_pred             CCcEEEeccccccc--cccccchHHHHHHHHhhccceeeeehhhhhhhhhc--CCcccccccccccccCCCCchhHHHHH
Confidence            99999999998765  68888999999999999999999999999999965  467777776555 44688999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccC----------CCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHH
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSR----------NSINPAILEAFLSEMGNLRGQVLNAEGIANAALY  225 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  225 (302)
                      +|++.|+|.+++|++++|||||+|+||++.|++.+.          ....++...+......|+ +|+++|+|||++++|
T Consensus       160 ~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eVa~~v~f  238 (259)
T d1ja9a_         160 AAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRAVSA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999987532          122344444544444444 899999999999999


Q ss_pred             hccCCCCCccccEEeeCCCc
Q 044670          226 LATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       226 l~s~~~~~~~G~~~~~~gG~  245 (302)
                      |+|+.++++||+.|.+|||.
T Consensus       239 L~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         239 LCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHSGGGTTCCSCEEEESTTC
T ss_pred             HhCchhcCCcCceEEeCCCC
Confidence            99999999999999999995

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-49  Score=338.93  Aligned_cols=237  Identities=26%  Similarity=0.387  Sum_probs=205.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++||++|||||++|||+++|++|+++|++|++++|+.+++++..+++     +.++.++.+|++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999999999888777665     2468899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC---CCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH---KGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      |++|+||||||....          ++|++++++|+.+++++++.++|+|.++.   .|+||++||.++..+.++..+|+
T Consensus        81 G~iDilVnnAg~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  150 (254)
T d2gdza1          81 GRLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  150 (254)
T ss_dssp             SCCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCcCeeccccccccc----------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchH
Confidence            999999999997542          35899999999999999999999997653   47899999999999999999999


Q ss_pred             HHHHHHHHHHHH--HHHHHCCCCcEEEEEeCCcccCCcccCCCCCH------HHHHHHHHhccccCCCCCCHHHHHHHHH
Q 044670          153 VSKYGIIALVKI--LAAELRQYGLRVNCVSPYGLVSGISSRNSINP------AILEAFLSEMGNLRGQVLNAEGIANAAL  224 (302)
Q Consensus       153 ~sK~a~~~~~~~--la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~dva~~~~  224 (302)
                      +||+|++.|+|+  |+.|++++|||||+|+||+|.|++........      +..+.+... .+ .+++.+|+|+|++++
T Consensus       151 asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p-~~r~~~pedvA~~v~  228 (254)
T d2gdza1         151 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDM-IK-YYGILDPPLIANGLI  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHH-HH-HHCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhc-CC-CCCCcCHHHHHHHHH
Confidence            999999999997  78899999999999999999999876543211      122222222 22 378999999999999


Q ss_pred             HhccCCCCCccccEEeeCCCcccCCCC
Q 044670          225 YLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       225 ~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      ||+|++  ++||+.+.+|||.++..++
T Consensus       229 fL~s~~--~itG~~i~VdGG~~~~~~~  253 (254)
T d2gdza1         229 TLIEDD--ALNGAIMKITTSKGIHFQD  253 (254)
T ss_dssp             HHHHCT--TCSSCEEEEETTTEEEECC
T ss_pred             HHHcCC--CCCCCEEEECCCCeeeccc
Confidence            999864  4999999999998875543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1.1e-47  Score=332.53  Aligned_cols=243  Identities=26%  Similarity=0.407  Sum_probs=207.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+.+ .++++.++   .+.++.++.+|++|+++++++++++.+++|
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            68999999999999999999999999999999988754 44444433   357899999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK  155 (302)
                      ++|++|||+|....  .++.+.+.++|++++++|+.+++++++++.|+|.+  .+++++++|+.+. .+.++...|++||
T Consensus        96 ~idilV~nag~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asK  171 (272)
T d1g0oa_          96 KLDIVCSNSGVVSF--GHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSK  171 (272)
T ss_dssp             CCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred             CCCccccccccchh--hhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHH
Confidence            99999999998765  68889999999999999999999999999999965  4788888877654 4567778899999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC---------CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHh
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN---------SINPAILEAFLSEMGNLRGQVLNAEGIANAALYL  226 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  226 (302)
                      +|+++|+|.+++||+++|||||+|+||+|.|++....         ....+...........|.+|+.+|+|||++++||
T Consensus       172 aal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL  251 (272)
T d1g0oa_         172 GAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL  251 (272)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999875321         1123333332222233459999999999999999


Q ss_pred             ccCCCCCccccEEeeCCCccc
Q 044670          227 ATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       227 ~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+.++++||++|.+|||..+
T Consensus       252 ~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         252 ASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HSGGGTTCCSCEEEESTTCCC
T ss_pred             hCchhcCccCceEeECCCCCC
Confidence            999999999999999999753

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=3.3e-48  Score=329.32  Aligned_cols=226  Identities=23%  Similarity=0.320  Sum_probs=204.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCE-------EEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAK-------VVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~-------V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++||||||++|||++++++|+++|++       |++.+|+.+.++++.+++   +.++.++.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999997       899999998888777665   46788999999999999999999999


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      ++|++|+||||||....  .++.+.+.++|+++|++|+.|+++++++++|+|++++.|+||++||.++..+.+++..|++
T Consensus        82 ~~g~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~a  159 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRF--GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCM  159 (240)
T ss_dssp             HTSCCSEEEECCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             HcCCcceeecccccccC--CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHH
Confidence            99999999999998765  6899999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|+++|+++++.|++++||+||+|+||+|.|++........             ..++.+|+|+|++++|++++++.+
T Consensus       160 sK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~~-------------~~~~~~PedvA~~v~~l~s~~~~~  226 (240)
T d2bd0a1         160 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-------------QALMMMPEDIAAPVVQAYLQPSRT  226 (240)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-------------GGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHhh-------------HhcCCCHHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999999976542111             134779999999999999988888


Q ss_pred             ccccE-EeeCCC
Q 044670          234 VTGLN-LVVDGG  244 (302)
Q Consensus       234 ~~G~~-~~~~gG  244 (302)
                      ++|+. +..+||
T Consensus       227 ~~~~~~i~p~~G  238 (240)
T d2bd0a1         227 VVEEIILRPTSG  238 (240)
T ss_dssp             EEEEEEEEETTC
T ss_pred             ccCCEEEEecCC
Confidence            88875 447776

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-48  Score=330.44  Aligned_cols=238  Identities=32%  Similarity=0.458  Sum_probs=205.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||+++++.|+++|++|++++|++++++++.+.  ..+....+|+.+.+.    ++...+.++++|+
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~--~~~~~~~~d~~~~~~----~~~~~~~~~~id~   77 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY--PGIQTRVLDVTKKKQ----IDQFANEVERLDV   77 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS--TTEEEEECCTTCHHH----HHHHHHHCSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc--cCCceeeeecccccc----cccccccccccee
Confidence            6899999999999999999999999999999999998887766554  346788889988776    4555667789999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc-cCCCCChhHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE-IAGIGSPAYTVSKYGII  159 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~a~~  159 (302)
                      ||||||....  .++.+.+.++|++.+++|+.+++.+++++.|+|.+++.|+||++||..+. .+.+++.+|++||+|++
T Consensus        78 lVn~ag~~~~--~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~  155 (245)
T d2ag5a1          78 LFNVAGFVHH--GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVI  155 (245)
T ss_dssp             EEECCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHH
T ss_pred             EEecccccCC--CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHH
Confidence            9999998775  57888999999999999999999999999999988889999999998764 57788999999999999


Q ss_pred             HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC---CCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          160 ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS---INPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       160 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      +|+|.+|+||+++|||||+|+||+|+||+.....   ..+....+......| .+|+.+|+|+|+++.||++++++++||
T Consensus       156 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~p-l~R~~~pedva~~v~fL~s~~s~~iTG  234 (245)
T d2ag5a1         156 GLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK-TGRFATAEEIAMLCVYLASDESAYVTG  234 (245)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT-TSSCEEHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCC-CCCCcCHHHHHHHHHHHhChhhCCCcC
Confidence            9999999999999999999999999999875321   122222233333233 489999999999999999999999999


Q ss_pred             cEEeeCCCccc
Q 044670          237 LNLVVDGGFSV  247 (302)
Q Consensus       237 ~~~~~~gG~~~  247 (302)
                      ++|.+|||+++
T Consensus       235 ~~i~VDGG~sl  245 (245)
T d2ag5a1         235 NPVIIDGGWSL  245 (245)
T ss_dssp             CEEEECTTGGG
T ss_pred             ceEEeCCCcCC
Confidence            99999999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-47  Score=328.06  Aligned_cols=238  Identities=24%  Similarity=0.296  Sum_probs=204.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.||++++++++++++++.+++
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            47999999999999999999999999999999999999888877665     2578899999999999999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccC--CCCChhH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIA--GIGSPAY  151 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~--~~~~~~Y  151 (302)
                      |++|+||||||....  .++.+.+.++|++.+++|+.++++++++++|.|++++  .|+||++||.++...  .++...|
T Consensus        88 g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y  165 (257)
T d1xg5a_          88 SGVDICINNAGLARP--DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFY  165 (257)
T ss_dssp             CCCSEEEECCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHH
T ss_pred             CCCCEEEecccccCC--CccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHH
Confidence            999999999998765  6889999999999999999999999999999987654  689999999988654  4456779


Q ss_pred             HHHHHHHHHHHHHHHHHH--CCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          152 TVSKYGIIALVKILAAEL--RQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~--~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      ++||+++.+|+|+|+.|+  +++||+||+|+||++.|++......  ...+......  +.+++++|+|+|++++||+|+
T Consensus       166 ~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~--~~~~~~~~~~--~~~r~~~pedvA~~v~fL~s~  241 (257)
T d1xg5a_         166 SATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD--KDPEKAAATY--EQMKCLKPEDVAEAVIYVLST  241 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT--TCHHHHHHHH--C---CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh--hhHHHHHhcC--CCCCCcCHHHHHHHHHHHhCC
Confidence            999999999999999998  7889999999999999998754421  2222333332  238899999999999999999


Q ss_pred             CCCCccccEEeeCCC
Q 044670          230 EASDVTGLNLVVDGG  244 (302)
Q Consensus       230 ~~~~~~G~~~~~~gG  244 (302)
                      +++++|||++..++|
T Consensus       242 ~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         242 PAHIQIGDIQMRPTG  256 (257)
T ss_dssp             CTTEEEEEEEEEETT
T ss_pred             hhcCeECCEEEEeCC
Confidence            999999998655554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2e-48  Score=341.06  Aligned_cols=230  Identities=26%  Similarity=0.380  Sum_probs=204.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC---------ccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ---------DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+         .+.++++.++++.....+.+|++|.++++++++++
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            589999999999999999999999999999998764         34455666666545566788999999999999999


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                      .+++|++|+||||||+...  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.++...|
T Consensus        85 ~~~~G~iDiLVnNAGi~~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y  162 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILRD--RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANY  162 (302)
T ss_dssp             HHHTSCCCEEEECCCCCCC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHH
T ss_pred             HHHcCCCCEEEECCccCCC--CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHH
Confidence            9999999999999999875  68999999999999999999999999999999998889999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      ++||+|+..|+++++.|++++||+||+|+||++.|++....  ..+.            .+.++|+|+|++++||+|+.+
T Consensus       163 ~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~--~~~~------------~~~~~PedvA~~v~fL~S~~a  228 (302)
T d1gz6a_         163 SAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM--PEDL------------VEALKPEYVAPLVLWLCHESC  228 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS--CHHH------------HHHSCGGGTHHHHHHHTSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC--cHhh------------HhcCCHHHHHHHHHHHcCCCc
Confidence            99999999999999999999999999999999987764432  1111            235579999999999999754


Q ss_pred             CCccccEEeeCCCccc
Q 044670          232 SDVTGLNLVVDGGFSV  247 (302)
Q Consensus       232 ~~~~G~~~~~~gG~~~  247 (302)
                       ++||++|.+|||+.-
T Consensus       229 -~itG~~i~vdGG~~~  243 (302)
T d1gz6a_         229 -EENGGLFEVGAGWIG  243 (302)
T ss_dssp             -CCCSCEEEEETTEEE
T ss_pred             -CCCCcEEEeCCCcee
Confidence             789999999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=6.5e-47  Score=331.39  Aligned_cols=244  Identities=26%  Similarity=0.323  Sum_probs=210.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++|||+++|++|+++|++|++++|+.++.++..+++    +.++.++.+|++++++++++++.+.++++
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            68999999999999999999999999999999999988776655443    67889999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhcc-CCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIP-QHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      ++|+||||||....  .++...+.+++++++.+|+.+.+.+.+...+.+.. ...+.+++++|..+..+.++..+|++||
T Consensus       103 ~iDilvnnAg~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasK  180 (294)
T d1w6ua_         103 HPNIVINNAAGNFI--SPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAK  180 (294)
T ss_dssp             SCSEEEECCCCCCC--SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             ccchhhhhhhhccc--cccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHH
Confidence            99999999998765  57888899999999999999999998887776654 4567888999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCH-HHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINP-AILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      +|++.|+|.+|.|++++|||||+|+||+|.|++........ ...+..... . |.+|+.+|+|+|+++.||+|+.++++
T Consensus       181 aal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-~-pl~R~~~pediA~~v~fL~sd~s~~i  258 (294)
T d1w6ua_         181 AGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR-I-PCGRLGTVEELANLAAFLCSDYASWI  258 (294)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT-C-TTSSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhc-C-CCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999999876654333 333444333 2 34899999999999999999999999


Q ss_pred             cccEEeeCCCcccC
Q 044670          235 TGLNLVVDGGFSVA  248 (302)
Q Consensus       235 ~G~~~~~~gG~~~~  248 (302)
                      ||++|.+|||+++.
T Consensus       259 tG~~i~vDGG~~l~  272 (294)
T d1w6ua_         259 NGAVIKFDGGEEVL  272 (294)
T ss_dssp             CSCEEEESTTHHHH
T ss_pred             CCcEEEECCChhhe
Confidence            99999999998753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-44  Score=307.34  Aligned_cols=236  Identities=28%  Similarity=0.389  Sum_probs=204.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||++|||||++|||++++++|+++|++|++++|+++.+++..++++.....+.+|+.+.+.++....++...++.+|.
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   82 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence            68999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             EEEcccCCCCC----CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC------CCCEEEEEcCcccccCCCCChh
Q 044670           81 MYNNAGIVDRG----FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ------HKGCILFTASACTEIAGIGSPA  150 (302)
Q Consensus        81 lv~~Ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~iv~~sS~~~~~~~~~~~~  150 (302)
                      +++|+++....    ..+..+.+.++|++++++|+.+++++++++.|+|..+      +.|+||++||..+..+.+++.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~  162 (248)
T d2o23a1          83 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAA  162 (248)
T ss_dssp             EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHH
T ss_pred             cccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchH
Confidence            99998876432    1355667889999999999999999999999997543      5689999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCC
Q 044670          151 YTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      |++||+|+++|+|.+++|++++|||||+|+||++.|++....  .++..+.+... .++.+|+.+|+|+|++++||++  
T Consensus       163 Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~-~pl~~R~g~peevA~~v~fL~s--  237 (248)
T d2o23a1         163 YSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQ-VPFPSRLGDPAEYAHLVQAIIE--  237 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHT-CSSSCSCBCHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcC--CHHHHHHHHhc-CCCCCCCcCHHHHHHHHHHHHh--
Confidence            999999999999999999999999999999999999987654  22333333333 3444889999999999999996  


Q ss_pred             CCCccccEEee
Q 044670          231 ASDVTGLNLVV  241 (302)
Q Consensus       231 ~~~~~G~~~~~  241 (302)
                      ++|+|||+|.|
T Consensus       238 ~~~itGq~I~v  248 (248)
T d2o23a1         238 NPFLNGEVIRL  248 (248)
T ss_dssp             CTTCCSCEEEE
T ss_pred             CCCCCceEeEC
Confidence            57999999875

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-44  Score=311.31  Aligned_cols=236  Identities=18%  Similarity=0.186  Sum_probs=202.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH---cCCEEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~---~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      |+||++||||||+|||+++|++|++   +|++|++++|++++++++.+++     +.++.+++||++++++++++++.+.
T Consensus         4 L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            6899999999999999999999996   7999999999999888877665     3478899999999999999999987


Q ss_pred             HH----cCCccEEEEcccCCCC-CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC--CCEEEEEcCcccccCC
Q 044670           73 AK----YGKLDIMYNNAGIVDR-GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH--KGCILFTASACTEIAG  145 (302)
Q Consensus        73 ~~----~~~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~iv~~sS~~~~~~~  145 (302)
                      +.    ++.+|++|||||.... ...++.+.+.++|+++|++|+.++++++++++|+|.+++  .++||++||.++..+.
T Consensus        84 ~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~  163 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPY  163 (259)
T ss_dssp             HSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCC
T ss_pred             HhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCC
Confidence            73    3578999999997643 235678889999999999999999999999999998765  5799999999999999


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCC---CCCHHHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRN---SINPAILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      +++.+|++||+|+++|+++|+.|  .+|||||+|+||+|.|++....   ...++..+.+.... + .+++.+|+|+|++
T Consensus       164 ~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~-~-~~r~~~p~evA~~  239 (259)
T d1oaaa_         164 KGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK-S-DGALVDCGTSAQK  239 (259)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH-H-TTCSBCHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC-C-CCCCCCHHHHHHH
Confidence            99999999999999999999999  5699999999999999986432   12344444443332 2 3789999999999


Q ss_pred             HHHhccCCCCCccccEEee
Q 044670          223 ALYLATDEASDVTGLNLVV  241 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~  241 (302)
                      +++++++ .+++||+.|++
T Consensus       240 i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         240 LLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEET
T ss_pred             HHHHhhh-ccCCCCCeEEe
Confidence            9999986 56999999876

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=4.2e-45  Score=312.67  Aligned_cols=231  Identities=19%  Similarity=0.162  Sum_probs=193.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH---h-CCCeEEEEecCC-CHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---L-GEDVCYIHCDVT-SEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~-~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~   75 (302)
                      |+||+||||||++|||+++|++|+++|++|++++|+.+..+++.+.   . +.++.++.+|++ +.++++++++++.+++
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            6899999999999999999999999999999998877665544332   1 357889999998 6788999999999999


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC---CCCEEEEEcCcccccCCCCChhHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ---HKGCILFTASACTEIAGIGSPAYT  152 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~iv~~sS~~~~~~~~~~~~Y~  152 (302)
                      |+||+||||||..          +.++|++++++|+.|++++++.++|.|.++   ..|+||++||.++..+.+++.+|+
T Consensus        83 g~iDilvnnAG~~----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~  152 (254)
T d1sbya1          83 KTVDILINGAGIL----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYS  152 (254)
T ss_dssp             SCCCEEEECCCCC----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHH
T ss_pred             CCCCEEEeCCCCC----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHH
Confidence            9999999999954          246799999999999999999999999765   358999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      +||+|+.+|+++|+.|++++|||||+|+||+|.||+.+......... ......+ ..++..++|++|++++++.+.   
T Consensus       153 asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~e~va~~~~~~~~~---  227 (254)
T d1sbya1         153 ASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVE-PRVAELL-LSHPTQTSEQCGQNFVKAIEA---  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSC-TTHHHHH-TTSCCEEHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHH-HHHHhcc-ccCCCCCHHHHHHHHHHhhhC---
Confidence            99999999999999999999999999999999999765443221111 1111111 124567899999999888753   


Q ss_pred             CccccEEeeCCCcc
Q 044670          233 DVTGLNLVVDGGFS  246 (302)
Q Consensus       233 ~~~G~~~~~~gG~~  246 (302)
                      ..+|+++.+|||..
T Consensus       228 ~~tG~vi~vdgG~l  241 (254)
T d1sbya1         228 NKNGAIWKLDLGTL  241 (254)
T ss_dssp             CCTTCEEEEETTEE
T ss_pred             CCCCCEEEECCCEe
Confidence            35999999999964

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-44  Score=305.51  Aligned_cols=213  Identities=25%  Similarity=0.375  Sum_probs=192.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++||++|||||++|||++++++|+++|++|++++|+.++++++.+++   +.++.++.||++|+++++++++++.+++|+
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999999999888776655   567899999999999999999999999999


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHH
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYG  157 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (302)
                      +|++|||||....  .++.+.+.+.|+++|++|+.|+++++++++|+|.+++.|+||++||.++..+.+++.+|++||+|
T Consensus        85 idilinnag~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  162 (244)
T d1yb1a_          85 VSILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFA  162 (244)
T ss_dssp             CSEEEECCCCCCC--CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHH
T ss_pred             CceeEeecccccc--ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHH
Confidence            9999999998875  57778889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHCC---CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccC
Q 044670          158 IIALVKILAAELRQ---YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATD  229 (302)
Q Consensus       158 ~~~~~~~la~e~~~---~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~  229 (302)
                      +..|+++|+.|+++   +||+||+|+||+|.|++.....          ..    ..+..+|+++|+.++..+..
T Consensus       163 l~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~----------~~----~~~~~~pe~va~~i~~~~~~  223 (244)
T d1yb1a_         163 AVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS----------TS----LGPTLEPEEVVNRLMHGILT  223 (244)
T ss_dssp             HHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH----------HH----HCCCCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC----------cc----ccCCCCHHHHHHHHHHHHhc
Confidence            99999999999865   5899999999999999875421          01    14577999999999877643

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.2e-43  Score=303.14  Aligned_cols=245  Identities=21%  Similarity=0.240  Sum_probs=209.2

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||++  |||+++|++|+++|++|++++|+++..+...+..  ......+..|+++..++.+.++++.+.++
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            6899999999998  8999999999999999999999877555443322  35667889999999999999999999999


Q ss_pred             CccEEEEcccCCCCCC---CCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           77 KLDIMYNNAGIVDRGF---ASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      ++|++||||+......   ........+.|...+.+|+.+.+.+.+.+.+.+.+  .+.|+++||.++..+.++...|++
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~  160 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGL  160 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHH
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHH
Confidence            9999999998865311   11234556779999999999999999999999853  567999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCC
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASD  233 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~  233 (302)
                      ||+|++.|+|.+++||+++|||||+|+||+|.|++...........+...... | .+|+.+|||+|+++.||+|+.+++
T Consensus       161 sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~-p-l~R~~~peeia~~v~fL~s~~s~~  238 (258)
T d1qsga_         161 AKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT-P-IRRTVTIEDVGNSAAFLCSDLSAG  238 (258)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS-T-TSSCCCHHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCC-C-CCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999999876544444444444443 3 489999999999999999999999


Q ss_pred             ccccEEeeCCCcccCC
Q 044670          234 VTGLNLVVDGGFSVAN  249 (302)
Q Consensus       234 ~~G~~~~~~gG~~~~~  249 (302)
                      +||+++.+|||+++..
T Consensus       239 itG~~i~vDGG~~i~g  254 (258)
T d1qsga_         239 ISGEVVHVDGGFSIAA  254 (258)
T ss_dssp             CCSCEEEESTTGGGBC
T ss_pred             ccCceEEECcCHHHhc
Confidence            9999999999998653

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=6.4e-43  Score=304.24  Aligned_cols=239  Identities=24%  Similarity=0.302  Sum_probs=193.1

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-cHHHHHHHHh----CCCeEE-----------------EEecCCCH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-NLGQALACKL----GEDVCY-----------------IHCDVTSE   61 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~~~----~~~~~~-----------------~~~Dl~~~   61 (302)
                      .++|||||++|||+++|++|+++|++|++++++. +..+++.+++    +.....                 +.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5799999999999999999999999999987754 4444444433    233333                 45669999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHH--------------HHHHHHhhHHHHHHHHHHHhh--
Q 044670           62 DEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLD--------------RVLAVNTTGGFLGAKHAARVM--  125 (302)
Q Consensus        62 ~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~~~~l--  125 (302)
                      ++++++++++.+++|++|+||||||....  .++.+.+.++|+              .+|.+|+.+++++.+.+.+.+  
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            99999999999999999999999998765  456555555443              579999999999999988864  


Q ss_pred             ----ccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHH
Q 044670          126 ----IPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEA  201 (302)
Q Consensus       126 ----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  201 (302)
                          .+...++|++++|.....+.++..+|++||+|++.|+|.+++||+++|||||+|+||++.+....    .++..+.
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~----~~~~~~~  236 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----PPAVWEG  236 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGS----CHHHHHH
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccC----CHHHHHH
Confidence                33456789999999999999999999999999999999999999999999999999986544322    3455555


Q ss_pred             HHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          202 FLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       202 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                      +.... ++.+|+.+|+|+|++++||+|++++++||++|.+|||+++.+
T Consensus       237 ~~~~~-pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~r  283 (284)
T d1e7wa_         237 HRSKV-PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLTR  283 (284)
T ss_dssp             HHTTC-TTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHhcC-CCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhccC
Confidence            55443 444889999999999999999999999999999999998764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.5e-43  Score=311.31  Aligned_cols=245  Identities=17%  Similarity=0.212  Sum_probs=199.4

Q ss_pred             CCCEEEEeC--CCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC---------------CCeEEEE---------
Q 044670            2 EGKVAIITG--GASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG---------------EDVCYIH---------   55 (302)
Q Consensus         2 ~gk~vlVTG--as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~---------   55 (302)
                      ++|++||||  +++|||+++|++|+++|++|++++++............               .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            589999999  66899999999999999999999987765443332210               1112222         


Q ss_pred             -----------ecCCCHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           56 -----------CDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        56 -----------~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                                 +|+++.++++++++++.+++|++|+||||||.......++.+.+.++|++.+++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       367788899999999999999999999999976543357888999999999999999999999999999


Q ss_pred             hccCCCCEEEEEcCcccccCCCC-ChhHHHHHHHHHHHHHHHHHHHCC-CCcEEEEEeCCcccCCcccCC----------
Q 044670          125 MIPQHKGCILFTASACTEIAGIG-SPAYTVSKYGIIALVKILAAELRQ-YGLRVNCVSPYGLVSGISSRN----------  192 (302)
Q Consensus       125 l~~~~~~~iv~~sS~~~~~~~~~-~~~Y~~sK~a~~~~~~~la~e~~~-~gi~v~~v~PG~v~t~~~~~~----------  192 (302)
                      |.+  .|+||++||.++..+.|+ ...|++||+|+++|+|.++.||++ +|||||+|+||+|.|+.....          
T Consensus       161 m~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~  238 (329)
T d1uh5a_         161 MKP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN  238 (329)
T ss_dssp             EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC---------
T ss_pred             ccc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhh
Confidence            954  589999999999888876 467999999999999999999986 699999999999999532210          


Q ss_pred             --------------------------------CCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEe
Q 044670          193 --------------------------------SINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLV  240 (302)
Q Consensus       193 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~  240 (302)
                                                      ....+...+......| ++|+.+|+|+|.+++||+|+.++++|||+|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-l~R~~~pedvA~~v~fLaSd~s~~iTGq~i~  317 (329)
T d1uh5a_         239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAP-LRQKLLSTDIGSVASFLLSRESRAITGQTIY  317 (329)
T ss_dssp             ---------------------------------CHHHHHHHHHHHHSS-SCSCCCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             hhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCC-CCCCcCHHHHHHHHHHHhCchhCCccCCeEE
Confidence                                            0012223333333334 4999999999999999999999999999999


Q ss_pred             eCCCcccCC
Q 044670          241 VDGGFSVAN  249 (302)
Q Consensus       241 ~~gG~~~~~  249 (302)
                      +|||+++..
T Consensus       318 VDGG~~~~g  326 (329)
T d1uh5a_         318 VDNGLNIMF  326 (329)
T ss_dssp             ESTTGGGCS
T ss_pred             ECCCccccc
Confidence            999997654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=3.7e-42  Score=298.07  Aligned_cols=265  Identities=18%  Similarity=0.198  Sum_probs=205.1

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHH--HhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALAC--KLGEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++..+.+.+  ..+....++.+|++++++++++++++.+.+|
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            6899999999865  99999999999999999999998754333322  2245677889999999999999999999999


Q ss_pred             CccEEEEcccCCCCC--CCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           77 KLDIMYNNAGIVDRG--FASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++|++|||+|.....  ..+......+.+...+.++..+.+...+...+.+  +..+.|+++||.+...+.+....|++|
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~~~~~~~~~~~y~as  160 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLGSTKYMAHYNVMGLA  160 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccccccccccchhhhHH
Confidence            999999999986531  1122333344555555555555555555444443  224557777788778888888999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+|+++++|+++.|++++|||||+|+||++.|++...... .+..........+ .+|+.+|+|+|++++||+|+.+.++
T Consensus       161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~p-~~r~~~pedIA~~v~fL~S~~s~~i  238 (274)
T d2pd4a1         161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD-FRMILKWNEINAP-LRKNVSLEEVGNAGMYLLSSLSSGV  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT-HHHHHHHHHHHST-TSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCc-hHHHHHHHhhhhh-ccCCcCHHHHHHHHHHHhChhhCCC
Confidence            9999999999999999999999999999999998866543 2333333333333 4899999999999999999999999


Q ss_pred             cccEEeeCCCcccCCCCccccCCCccceeeccCCccc
Q 044670          235 TGLNLVVDGGFSVANPSLMKFASPFHLIKAIGDGCRS  271 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (302)
                      ||++|.+|||+++..-  ..+..++..+..+|+..++
T Consensus       239 tG~~i~vDGG~~~~g~--~~~~~~~~~~~~~~~~~~~  273 (274)
T d2pd4a1         239 SGEVHFVDAGYHVMGM--GAVEEKDNKATLLWDLHKE  273 (274)
T ss_dssp             CSCEEEESTTGGGBSS--CCCTTCTTTTCCHHHHSSC
T ss_pred             cCceEEECCChhhccC--Ccccccccchhhhhhhhcc
Confidence            9999999999987533  3334566777888887654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.7e-42  Score=290.05  Aligned_cols=232  Identities=28%  Similarity=0.331  Sum_probs=196.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|++|||||++|||+++|++|+++|++|++++|+++.         .+...+.+|+++...+.++......... .+.++
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG---------EDLIYVEGDVTREEDVRRAVARAQEEAP-LFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS---------SSSEEEECCTTCHHHHHHHHHHHHHHSC-EEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc---------ccceEeeccccchhhhHHHHHhhhcccc-ccchh
Confidence            6999999999999999999999999999999998763         3557789999999999999888877654 45666


Q ss_pred             EcccCCCC--CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh------hccCCCCEEEEEcCcccccCCCCChhHHHH
Q 044670           83 NNAGIVDR--GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV------MIPQHKGCILFTASACTEIAGIGSPAYTVS  154 (302)
Q Consensus        83 ~~Ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  154 (302)
                      ++++....  ........+.+.|++++++|+.+++.+++.+.+.      |.+++.|+||++||.++..+.++..+|++|
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  150 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAAS  150 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHH
Confidence            66665432  1234455678899999999999999999999998      444567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCc
Q 044670          155 KYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDV  234 (302)
Q Consensus       155 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~  234 (302)
                      |+|++.|+|+++.|++++|||||+|+||+|.|++....  .....+....+. ++.+|+.+|+|+|++++||+|  ++++
T Consensus       151 Kaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~-~~~~R~g~pedvA~~v~fL~s--~~~i  225 (241)
T d1uaya_         151 KGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQV-PFPPRLGRPEEYAALVLHILE--NPML  225 (241)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTC-CSSCSCCCHHHHHHHHHHHHH--CTTC
T ss_pred             HHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh--hhhHHHHHHhcC-CCCCCCcCHHHHHHHHHHHHh--CCCC
Confidence            99999999999999999999999999999999988765  344444444444 334889999999999999997  4699


Q ss_pred             cccEEeeCCCcccCC
Q 044670          235 TGLNLVVDGGFSVAN  249 (302)
Q Consensus       235 ~G~~~~~~gG~~~~~  249 (302)
                      |||+|.+|||+.+.+
T Consensus       226 TG~~i~VDGG~~m~p  240 (241)
T d1uaya_         226 NGEVVRLDGALRMAP  240 (241)
T ss_dssp             CSCEEEESTTCCCCC
T ss_pred             CCCEEEECCcccCCC
Confidence            999999999987653

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-42  Score=301.09  Aligned_cols=225  Identities=19%  Similarity=0.186  Sum_probs=181.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEE---ecCccHH---HHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIA---DVQDNLG---QALACKL---GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~---~r~~~~~---~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      -|+|||||||+|||+++|++|+++|++|+.+   .|+.+..   .+..+.+   +.++.++.+|++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5789999999999999999999999985544   5544433   3333333   46799999999999999999988743


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                        +.+|+||||||....  .++.+.+.++|++++++|+.|+++++++++|+|++++.|+||++||.++..+.+++..|++
T Consensus        82 --g~idilvnnag~~~~--~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~a  157 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLL--GPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (285)
T ss_dssp             --SCCSEEEECCCCCCC--SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             --cchhhhhhccccccc--ccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHH
Confidence              789999999998765  5788899999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHH---------HHHHHH----hccccCCCCCCHHHHH
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAI---------LEAFLS----EMGNLRGQVLNAEGIA  220 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---------~~~~~~----~~~~~~~~~~~~~dva  220 (302)
                      ||+|+++|+++|+.|++++||+||+|+||+|.|++.......++.         .+.+..    ....+.++..+|+|||
T Consensus       158 sKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA  237 (285)
T d1jtva_         158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHH
Confidence            999999999999999999999999999999999998765433221         111111    1111225578999999


Q ss_pred             HHHHHhccCCC
Q 044670          221 NAALYLATDEA  231 (302)
Q Consensus       221 ~~~~~l~s~~~  231 (302)
                      ++++++++.+.
T Consensus       238 ~~v~~~~~~~~  248 (285)
T d1jtva_         238 EVFLTALRAPK  248 (285)
T ss_dssp             HHHHHHHHCSS
T ss_pred             HHHHHHHhCCC
Confidence            99999996543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.5e-42  Score=300.24  Aligned_cols=247  Identities=21%  Similarity=0.215  Sum_probs=197.5

Q ss_pred             CCCCEEEEeCCCC--hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC---------------CCeEEEEec------
Q 044670            1 LEGKVAIITGGAS--GIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG---------------EDVCYIHCD------   57 (302)
Q Consensus         1 l~gk~vlVTGas~--gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~D------   57 (302)
                      |+||++|||||++  |||+++|++|+++|++|++++|++...........               ..-....+|      
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP   85 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence            6899999999876  99999999999999999999987654332222110               011233333      


Q ss_pred             --------------CCCHHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHH
Q 044670           58 --------------VTSEDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAAR  123 (302)
Q Consensus        58 --------------l~~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  123 (302)
                                    .++..+++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++.+++++++
T Consensus        86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~  165 (297)
T d1d7oa_          86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP  165 (297)
T ss_dssp             GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence                          355667789999999999999999999998654346788899999999999999999999999999


Q ss_pred             hhccCCCCEEEEEcCcccc-cCCCCChhHHHHHHHHHHHHHHHHHHHC-CCCcEEEEEeCCcccCCcccCCCCCHHHHHH
Q 044670          124 VMIPQHKGCILFTASACTE-IAGIGSPAYTVSKYGIIALVKILAAELR-QYGLRVNCVSPYGLVSGISSRNSINPAILEA  201 (302)
Q Consensus       124 ~l~~~~~~~iv~~sS~~~~-~~~~~~~~Y~~sK~a~~~~~~~la~e~~-~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~  201 (302)
                      .+.++  ++++++++.+.. ...+....|+++|+++..+++.++.|++ ++|||||+|+||++.|++.......++..+.
T Consensus       166 ~~~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~  243 (297)
T d1d7oa_         166 IMNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEY  243 (297)
T ss_dssp             GEEEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHHHH
T ss_pred             HhhcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHHHH
Confidence            88653  556666655544 4456777899999999999999999996 6899999999999999998765433444444


Q ss_pred             HHHhccccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC
Q 044670          202 FLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS  251 (302)
Q Consensus       202 ~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~  251 (302)
                      .... .| ++|+.+|+|+|++++||+|+.++++|||+|.+|||++...-.
T Consensus       244 ~~~~-~P-lgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~~G~~  291 (297)
T d1d7oa_         244 SYNN-AP-IQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNSMGVA  291 (297)
T ss_dssp             HHHH-SS-SCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGCSSC
T ss_pred             HHhC-CC-CCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhhcCCC
Confidence            4433 33 489999999999999999999999999999999999875443

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=5e-41  Score=286.74  Aligned_cols=223  Identities=19%  Similarity=0.197  Sum_probs=183.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHH---HcCCEEEEEecCccHHHHHHHH--hCCCeEEEEecCCCHHHHHHHHHHHHH--Hc
Q 044670            3 GKVAIITGGASGIGAAAAKLFH---ENGAKVVIADVQDNLGQALACK--LGEDVCYIHCDVTSEDEITNLVDTAVA--KY   75 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~---~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~   75 (302)
                      -|+|||||||+|||+++|++|+   ++|++|++++|++++++++.+.  .+.++.++.+|++|+++++++++++.+  ++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            4899999999999999999997   5799999999999877665432  257899999999999999999999854  67


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-----------CCCEEEEEcCccccc-
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-----------HKGCILFTASACTEI-  143 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~~sS~~~~~-  143 (302)
                      +++|+||||||+.... .+..+.+.++|++++++|+.|++.++++++|+|+++           +.+++|+++|..+.. 
T Consensus        82 ~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            8999999999986542 457788999999999999999999999999999653           468999999987654 


Q ss_pred             --CCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHH
Q 044670          144 --AGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIAN  221 (302)
Q Consensus       144 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  221 (302)
                        +.+++.+|++||+|+.+|++.++.|++++||+||+|+||+|.|++.....                   ..++++.++
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~-------------------~~~~~~~~~  221 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA-------------------PLDVPTSTG  221 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC-------------------SBCHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC-------------------CCCchHHHH
Confidence              35567899999999999999999999999999999999999999875431                   113333343


Q ss_pred             HHHHhccCCCCCccccEEeeCCCc
Q 044670          222 AALYLATDEASDVTGLNLVVDGGF  245 (302)
Q Consensus       222 ~~~~l~s~~~~~~~G~~~~~~gG~  245 (302)
                      .++.++.......+|+++.+||+.
T Consensus       222 ~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         222 QIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHhcCccCCCcEEEECCeE
Confidence            344444333334589999999874

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-41  Score=294.97  Aligned_cols=216  Identities=25%  Similarity=0.317  Sum_probs=184.5

Q ss_pred             CCCE-EEEeCCCChHHHHHHHHHHHc-CCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKV-AIITGGASGIGAAAAKLFHEN-GAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~-vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +||+ +|||||++|||+++|++|+++ |++|++++|+.+++++..+++   +.++.++.+|++|.++++++++++.+++|
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g   80 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   80 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence            3555 499999999999999999986 899999999999988877665   56789999999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC------------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA------------  144 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~------------  144 (302)
                      ++|+||||||+...  .+..+.+.++|+++|++|+.|++++++.++|.|++  .|+||++||..+..+            
T Consensus        81 ~iDiLVnNAGi~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~  156 (275)
T d1wmaa1          81 GLDVLVNNAGIAFK--VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKF  156 (275)
T ss_dssp             SEEEEEECCCCCCC--TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHH
T ss_pred             CcEEEEEcCCcCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhh
Confidence            99999999999765  46667778899999999999999999999999965  589999999765422            


Q ss_pred             -----------------------------CCCChhHHHHHHHHHHHHHHHHHHHCC----CCcEEEEEeCCcccCCcccC
Q 044670          145 -----------------------------GIGSPAYTVSKYGIIALVKILAAELRQ----YGLRVNCVSPYGLVSGISSR  191 (302)
Q Consensus       145 -----------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~----~gi~v~~v~PG~v~t~~~~~  191 (302)
                                                   ..+..+|++||+++.+|++.+++|+++    .||+||+|+||+|.|++...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~  236 (275)
T d1wmaa1         157 RSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  236 (275)
T ss_dssp             HCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC
Confidence                                         123457999999999999999999865    48999999999999998653


Q ss_pred             CCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhc--cCCCCCccccEEe
Q 044670          192 NSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLA--TDEASDVTGLNLV  240 (302)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~--s~~~~~~~G~~~~  240 (302)
                      .                   ...+|+|+|+++++++  +++..+.+|+++.
T Consensus       237 ~-------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~  268 (275)
T d1wmaa1         237 K-------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS  268 (275)
T ss_dssp             T-------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred             c-------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE
Confidence            2                   2447999999999987  3455567887765

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=5.9e-41  Score=289.42  Aligned_cols=245  Identities=21%  Similarity=0.235  Sum_probs=201.6

Q ss_pred             CCCCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCccHH-HHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--
Q 044670            1 LEGKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDNLG-QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--   75 (302)
Q Consensus         1 l~gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--   75 (302)
                      |+||++|||||  ++|||+++|++|+++|++|++++|++.+. +++.+.++.+...+.+|++++++++++++.+.+.+  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            68999999995  57999999999999999999999998775 44556667778889999999999999999998764  


Q ss_pred             -CCccEEEEcccCCCC---CCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhH
Q 044670           76 -GKLDIMYNNAGIVDR---GFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAY  151 (302)
Q Consensus        76 -~~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y  151 (302)
                       +++|+++||||+...   ...++.+.+.+++.+.+.+|..+.+...+...+.+.   .+.+++++|.....+.+++..|
T Consensus        84 ~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~s~~~~~~~p~~~~y  160 (268)
T d2h7ma1          84 GNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN---PGGSIVGMDFDPSRAMPAYNWM  160 (268)
T ss_dssp             TCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE---EEEEEEEEECCCSSCCTTTHHH
T ss_pred             CCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc---cccccccccccccccCcccchh
Confidence             679999999997642   223566788899999999999999999888887653   2445666667777888899999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CH------HHHHHHHHhccccCCCCCCHHHHHHH
Q 044670          152 TVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NP------AILEAFLSEMGNLRGQVLNAEGIANA  222 (302)
Q Consensus       152 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~~~~dva~~  222 (302)
                      ++||+|++++++.+++|++++|||||+|+||+|.|++......   ..      +...+...+..|+.+++.+|+|+|++
T Consensus       161 ~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~~  240 (268)
T d2h7ma1         161 TVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKT  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHHH
T ss_pred             hccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999987642211   11      12222223334444669999999999


Q ss_pred             HHHhccCCCCCccccEEeeCCCcccC
Q 044670          223 ALYLATDEASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       223 ~~~l~s~~~~~~~G~~~~~~gG~~~~  248 (302)
                      +.||+|+.++++||++|.+|||+...
T Consensus       241 v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         241 VCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHhCchhcCccCCEEEECcCcccc
Confidence            99999999999999999999998743

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=7.3e-40  Score=282.10  Aligned_cols=241  Identities=24%  Similarity=0.286  Sum_probs=193.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-HHHHHHHh----CCCeEEEEecCC----CHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-GQALACKL----GEDVCYIHCDVT----SEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~----~~~~v~~~~~~~~~~   74 (302)
                      .++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++    +.....+.+|..    +++.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999998654 34444433    456666666554    467788888889999


Q ss_pred             cCCccEEEEcccCCCCCCC---------CCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-----CCCEEEEEcCcc
Q 044670           75 YGKLDIMYNNAGIVDRGFA---------SVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-----HKGCILFTASAC  140 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~~sS~~  140 (302)
                      +|++|+||||||+......         ...+...+.+...+..|+.+++...+...+.+...     ..+.+++++|..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999998754210         11222345677889999999999999888877542     356788999999


Q ss_pred             cccCCCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHH
Q 044670          141 TEIAGIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIA  220 (302)
Q Consensus       141 ~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  220 (302)
                      +..+.+++..|++||++++++++.++.|++++|||||+|+||++.|++..    ..+..+.+.+. .++.+++.+|+|+|
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~-~pl~r~~~~peeva  236 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRK-VPLGQSEASAAQIA  236 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTT-CTTTSCCBCHHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhc-CCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999999999998654    33444444444 34435568999999


Q ss_pred             HHHHHhccCCCCCccccEEeeCCCcccCC
Q 044670          221 NAALYLATDEASDVTGLNLVVDGGFSVAN  249 (302)
Q Consensus       221 ~~~~~l~s~~~~~~~G~~~~~~gG~~~~~  249 (302)
                      ++++||+|++++++||++|.+|||+.+.+
T Consensus       237 ~~v~fL~s~~s~~itG~~i~vDGG~~l~~  265 (266)
T d1mxha_         237 DAIAFLVSKDAGYITGTTLKVDGGLILAR  265 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred             HHHHHHhCchhCCccCCeEEECccHhhhC
Confidence            99999999999999999999999998753

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.3e-41  Score=286.04  Aligned_cols=223  Identities=17%  Similarity=0.225  Sum_probs=183.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--   76 (302)
                      |+.|+||||||++|||+++|++|+++|+  +|++++|+.++++++.+..+.+++++.+|++|+++++++++++.+.++  
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            7889999999999999999999999996  688899999988888776678899999999999999999999998876  


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-----------CCCEEEEEcCcccccC-
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-----------HKGCILFTASACTEIA-  144 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~iv~~sS~~~~~~-  144 (302)
                      ++|+||||||+... ..+..+.+.++|+++|++|+.|++++++.++|+|+++           ..+++++++|...... 
T Consensus        81 ~idilinnAG~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~  159 (250)
T d1yo6a1          81 GLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD  159 (250)
T ss_dssp             CCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred             CeEEEEEcCcccCC-CCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccC
Confidence            49999999998653 2467788899999999999999999999999999643           2478999887655433 


Q ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHH
Q 044670          145 ------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEG  218 (302)
Q Consensus       145 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  218 (302)
                            ..+..+|++||+|+.+|++.++.|++++||+||+|+||+|.|+|....                   ...+|++
T Consensus       160 ~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-------------------~~~~~e~  220 (250)
T d1yo6a1         160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-------------------AALTVEQ  220 (250)
T ss_dssp             CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------HH
T ss_pred             CcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-------------------CCCCHHH
Confidence                  234567999999999999999999999999999999999999986421                   1457899


Q ss_pred             HHHHHHHhccCCCCCccccEEeeCC
Q 044670          219 IANAALYLATDEASDVTGLNLVVDG  243 (302)
Q Consensus       219 va~~~~~l~s~~~~~~~G~~~~~~g  243 (302)
                      .++.++..+.......+|+.|..||
T Consensus       221 ~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         221 STAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHhcCCCCCCeEEECCCC
Confidence            9999988887655567898887775

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.5e-40  Score=279.34  Aligned_cols=218  Identities=15%  Similarity=0.133  Sum_probs=185.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~id   79 (302)
                      +||+||||||++|||++++++|+++|++|+++++++...       ......+.+|..+.++++.+.+++.+.++  ++|
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD   73 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE-------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   73 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT-------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------ccccceeecccCcHHHHHHHHHHHHHHhCCCCce
Confidence            589999999999999999999999999999999876532       13345667888889998888888877654  699


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHH
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGII  159 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (302)
                      +||||||..... .+..+.+.++|+++|++|+.+++++++.++|+|++  .|+||++||.++..+.+++.+|++||+|++
T Consensus        74 ~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          74 AILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             EEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            999999975432 35566678899999999999999999999999964  589999999999999999999999999999


Q ss_pred             HHHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcccc
Q 044670          160 ALVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTGL  237 (302)
Q Consensus       160 ~~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~  237 (302)
                      .|+++++.|++  ++||+||+|+||+++||+.+....          .  ....++..|+++|+.+.+|+++...+++|+
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~----------~--~~~~~~~~pe~va~~~~~l~s~~~~~i~G~  218 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP----------E--ADFSSWTPLEFLVETFHDWITGNKRPNSGS  218 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST----------T--SCGGGSEEHHHHHHHHHHHHTTTTCCCTTC
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc----------c--chhhcCCCHHHHHHHHHHHhCCCccCCCCC
Confidence            99999999998  579999999999999987543211          1  111457789999999999999999999998


Q ss_pred             EEee
Q 044670          238 NLVV  241 (302)
Q Consensus       238 ~~~~  241 (302)
                      .+.+
T Consensus       219 ~i~v  222 (236)
T d1dhra_         219 LIQV  222 (236)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            7665

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-39  Score=275.60  Aligned_cols=213  Identities=18%  Similarity=0.171  Sum_probs=187.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |+||++||||||+|||+++|++|+++|++|++++|++++++++.+++    +.....+.+|+++.+.+....+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999999999999888776543    56788899999999999999999999999


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHH
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKY  156 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  156 (302)
                      .+|+++||||....  .++.+.+.++|++++++|+.+++.+++.++|+|++ +.|+||++||.++..+.+++.+|++||+
T Consensus        92 ~~~~li~nag~~~~--~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~-~~G~ii~isS~~~~~~~p~~~~Y~asKa  168 (269)
T d1xu9a_          92 GLDMLILNHITNTS--LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKF  168 (269)
T ss_dssp             SCSEEEECCCCCCC--CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred             Cccccccccccccc--cccccCCHHHhhhheeeehhhHHHHHHHHHHHHHh-cCCcceEeccchhcCCCCCchHHHHHHH
Confidence            99999999998765  57788899999999999999999999999999974 4799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHCC--CCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhcc
Q 044670          157 GIIALVKILAAELRQ--YGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       157 a~~~~~~~la~e~~~--~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  228 (302)
                      |+++|+++|+.|+++  .||+||+|+||+|+|++......          ....  ....+++++|+.++....
T Consensus       169 al~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~----------~~~~--~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         169 ALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS----------GIVH--MQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC----------GGGG--GGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhcc----------CCcc--ccCCCHHHHHHHHHHHhh
Confidence            999999999999964  57999999999999987543211          1111  235689999999887653

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-38  Score=269.64  Aligned_cols=222  Identities=17%  Similarity=0.189  Sum_probs=181.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHH--cCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAK--YGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~--~~~id~   80 (302)
                      +++||||||++|||++++++|+++|++|++++|+++...       .....+.+|..+.+......+.+...  ++++|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            456799999999999999999999999999999876321       23455677888888888777777664  588999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      ||||||..... .+..+.+.+.|+.++++|+.+++++++.++|+|++  .|+||++||.++..+.+++.+|++||+|+++
T Consensus        75 linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          75 VFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             EEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            99999976532 34555567889999999999999999999999964  5899999999999999999999999999999


Q ss_pred             HHHHHHHHHC--CCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHH-HhccCCCCCcccc
Q 044670          161 LVKILAAELR--QYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAAL-YLATDEASDVTGL  237 (302)
Q Consensus       161 ~~~~la~e~~--~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~-~l~s~~~~~~~G~  237 (302)
                      |+++++.|++  +.+|+||+|+||+++|++.+...          ...  ...++.+|+++++.++ |+.++....++|+
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~----------~~~--~~~~~~~~~~va~~~~~~l~~~~~~~~tG~  219 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM----------PNA--DHSSWTPLSFISEHLLKWTTETSSRPSSGA  219 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS----------TTC--CGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhC----------cCC--ccccCCCHHHHHHHHHHHhcCccccCCCce
Confidence            9999999997  46899999999999998754321          111  1145789999999987 4556667789999


Q ss_pred             EEee---CCCcc
Q 044670          238 NLVV---DGGFS  246 (302)
Q Consensus       238 ~~~~---~gG~~  246 (302)
                      .+.+   ||+..
T Consensus       220 ~i~v~~~~g~~~  231 (235)
T d1ooea_         220 LLKITTENGTST  231 (235)
T ss_dssp             EEEEEEETTEEE
T ss_pred             EEEEEeeCCEEE
Confidence            9988   55543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=9.2e-38  Score=267.61  Aligned_cols=220  Identities=23%  Similarity=0.308  Sum_probs=166.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id~lv   82 (302)
                      |+||||||++|||+++|++|+++|++|++++|++..              ..+|+.+.+..+....++..+. +.+|++|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~--------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv   67 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE--------------VIADLSTAEGRKQAIADVLAKCSKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS--------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH--------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence            799999999999999999999999999999987542              3579999999888776665544 5799999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC------------------
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA------------------  144 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~------------------  144 (302)
                      ||||+...         .+.+.....+|..+...+.+...+.+.......+.++++......                  
T Consensus        68 ~~Ag~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  138 (257)
T d1fjha_          68 LCAGLGPQ---------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAK  138 (257)
T ss_dssp             ECCCCCTT---------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHH
T ss_pred             EcCCCCCc---------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEE
Confidence            99997532         234678899999999999999999887766666766665432211                  


Q ss_pred             ----------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCC
Q 044670          145 ----------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVL  214 (302)
Q Consensus       145 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (302)
                                .++..+|++||+|++.|+|+++.||+++|||||+|+||++.||+.......++..+...+... |.+|+.
T Consensus       139 i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-PlgR~g  217 (257)
T d1fjha_         139 ARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVP-PMGRRA  217 (257)
T ss_dssp             HHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCC-STTSCC
T ss_pred             EeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCC-CCCCCc
Confidence                      112346999999999999999999999999999999999999998765544444444444433 449999


Q ss_pred             CHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          215 NAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       215 ~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+|+|++++||+|++++++||++|.+|||++.
T Consensus       218 ~p~eva~~v~fL~S~~s~~itG~~i~vDGG~ta  250 (257)
T d1fjha_         218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhCCccCceEEeCCCccc
Confidence            999999999999999999999999999999863

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=2.2e-31  Score=228.02  Aligned_cols=220  Identities=15%  Similarity=0.180  Sum_probs=168.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc---cHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQD---NLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~---~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++++|||||++|||++++++|+++|+ +|++++|+.   +..+++.++   .+.++.++.||++|+++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            67999999999999999999999999 588898864   233333333   3678999999999999999999987654 


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                      +++|.+|||+|....  .++.+.+.++|++++++|+.+++++.+.+.+    .+.++||++||.++..+.++...|++||
T Consensus        88 ~~i~~vv~~ag~~~~--~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~----~~~~~iv~~SS~a~~~g~~~~~~YaAak  161 (259)
T d2fr1a1          88 VPLSAVFHAAATLDD--GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSFASAFGAPGLGGYAPGN  161 (259)
T ss_dssp             SCEEEEEECCCCCCC--CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTCCTTCTTTHHHH
T ss_pred             ccccccccccccccc--cccccccHHHHHHHhhhhccchhHHHHHhhc----cCCceEeeecchhhccCCcccHHHHHHH
Confidence            589999999998876  6888999999999999999999988775433    5678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCcc
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVT  235 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  235 (302)
                      ++++.|+++++.    .|+++++|+||.+.+++.....     ..+.+....   -..++++++++++..++.....  .
T Consensus       162 a~l~~la~~~~~----~Gi~v~~I~pg~~~~~g~~~~~-----~~~~~~~~G---~~~~~~~~~~~~l~~~l~~~~~--~  227 (259)
T d2fr1a1         162 AYLDGLAQQRRS----DGLPATAVAWGTWAGSGMAEGP-----VADRFRRHG---VIEMPPETACRALQNALDRAEV--C  227 (259)
T ss_dssp             HHHHHHHHHHHH----TTCCCEEEEECCBC-----------------CTTTT---EECBCHHHHHHHHHHHHHTTCS--S
T ss_pred             HhHHHHHHHHHh----CCCCEEECCCCcccCCccccch-----HHHHHHhcC---CCCCCHHHHHHHHHHHHhCCCc--e
Confidence            999888776654    5999999999998776543211     111111111   1256899999999888864332  3


Q ss_pred             ccEEeeCC
Q 044670          236 GLNLVVDG  243 (302)
Q Consensus       236 G~~~~~~g  243 (302)
                      ..++.+|.
T Consensus       228 ~~v~~~d~  235 (259)
T d2fr1a1         228 PIVIDVRW  235 (259)
T ss_dssp             CEECEECH
T ss_pred             EEEEeCcH
Confidence            33444443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=7.1e-25  Score=195.65  Aligned_cols=226  Identities=13%  Similarity=0.078  Sum_probs=162.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .|+||||||||+||++++++|+++|++|++++|....     .+.+..   ....++.++.+|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            3899999999999999999999999999999985432     222211   22467899999999999999988866   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------  144 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------  144 (302)
                        .+|+++|+|+....      ..+.++.+..+++|+.|+.+++.++...-. .+..++|++||.+.+..          
T Consensus        78 --~~d~v~h~aa~~~~------~~~~~~~~~~~~~Nv~gt~nllea~~~~~~-~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          78 --QPDEVYNLGAMSHV------AVSFESPEYTADVDAMGTLRLLEAIRFLGL-EKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             --CCSEEEECCCCCTT------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             --CCCEEEEeeccccc------chhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence              78999999997543      123345677899999999999999887533 23568999998764321          


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhccc--------cCCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEMGN--------LRGQ  212 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~--------~~~~  212 (302)
                       ..+...|+.||.+.|.+++.+++.+   ++++++++|+.|++|..............+   ......        ..+.
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~  225 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRD  225 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEEC
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeec
Confidence             1245689999999999999999774   799999999999999754332222222221   111111        1134


Q ss_pred             CCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          213 VLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +++++|+++++..++...    .|+.+++..|...
T Consensus       226 ~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         226 WGHAKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             CEEHHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             ceeechHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            889999999998877543    4677888777664

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.90  E-value=2.6e-23  Score=184.23  Aligned_cols=223  Identities=14%  Similarity=0.073  Sum_probs=159.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----G-EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +||+||||||||+||++++++|+++|++|+++.|+.++...+....    . .....+..|++|.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            5899999999999999999999999999999999876655443321    2 234557789999998777665       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------  146 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------  146 (302)
                      .+|+++|+|+....      ..+   ....+.+|+.|+.++++.+...   .+..++|++||..+.....          
T Consensus        83 ~~~~v~~~a~~~~~------~~~---~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~e  150 (342)
T d1y1pa1          83 GAAGVAHIASVVSF------SNK---YDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLDE  150 (342)
T ss_dssp             TCSEEEECCCCCSC------CSC---HHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEECT
T ss_pred             cchhhhhhcccccc------ccc---ccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCccccc
Confidence            78999999985431      122   3567788999999999888773   2467899999976432111          


Q ss_pred             ---------------------CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC---HHHHHHH
Q 044670          147 ---------------------GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN---PAILEAF  202 (302)
Q Consensus       147 ---------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~~~  202 (302)
                                           +...|+.||.+.|.+++.++++... ++++.+++|+.+.+|........   ..+....
T Consensus       151 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l  229 (342)
T d1y1pa1         151 KSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSL  229 (342)
T ss_dssp             TCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHHHHHHH
T ss_pred             cccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhccc-ccccceecccceeCCCCCccccccchHHHHHHH
Confidence                                 1246999999999999999988654 78999999999999865433221   2222222


Q ss_pred             HHhcc------ccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          203 LSEMG------NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       203 ~~~~~------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      .....      ...+.+++++|+|++++.++..+.  ..|+++...++..
T Consensus       230 ~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~~--~~g~~~~~~~~~~  277 (342)
T d1y1pa1         230 FNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQ--IERRRVYGTAGTF  277 (342)
T ss_dssp             HTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCTT--CCSCEEEECCEEE
T ss_pred             HcCCcCcccCCccceeeeeHHHHHHHHHHhhcCcc--ccceEEEEcCCce
Confidence            22111      111337899999999887775433  3677776666543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.90  E-value=1.5e-22  Score=182.59  Aligned_cols=214  Identities=10%  Similarity=-0.007  Sum_probs=154.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc-----------------c---HHHHHHHHhCCCeEEEEecCCCHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD-----------------N---LGQALACKLGEDVCYIHCDVTSED   62 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~-----------------~---~~~~~~~~~~~~~~~~~~Dl~~~~   62 (302)
                      ||+||||||||+||.+++++|+++||+|++++.-.                 .   .........+.+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            78999999999999999999999999999986211                 1   111222233567899999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccc
Q 044670           63 EITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTE  142 (302)
Q Consensus        63 ~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~  142 (302)
                      .++++++..     ++|+|+|.|+....   +......+.....+.+|+.|+.+++.++...-   ...++++.||....
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~---~~~~~i~~ss~~~~  149 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGTMGEY  149 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECCGGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc---ccccccccccccccccccccccHHHHHHHHhc---cccceeeccccccc
Confidence            998888865     79999999986542   23334556677899999999999999988752   23456777765543


Q ss_pred             cC------------------------CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC----
Q 044670          143 IA------------------------GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI----  194 (302)
Q Consensus       143 ~~------------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----  194 (302)
                      ..                        ..+...|+.||.+.|.+++.++++   +++++.+++|+.+++|.......    
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~~~v~G~~~~~~~~~~~~  226 (393)
T d1i24a_         150 GTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVKTDETEMHEEL  226 (393)
T ss_dssp             CCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECSCCTTGGGSGGG
T ss_pred             cccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeecccccccCCCcccccccccc
Confidence            21                        123457999999999999998877   47999999999999986532211    


Q ss_pred             -------------CHHHHHHHHHhcccc-------CCCCCCHHHHHHHHHHhccCC
Q 044670          195 -------------NPAILEAFLSEMGNL-------RGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       195 -------------~~~~~~~~~~~~~~~-------~~~~~~~~dva~~~~~l~s~~  230 (302)
                                   ...+........+..       .+.+++++|+++++..++...
T Consensus       227 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~  282 (393)
T d1i24a_         227 RNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANP  282 (393)
T ss_dssp             CCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSC
T ss_pred             ccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhh
Confidence                         122333333322111       134788999999999888543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.90  E-value=1.3e-23  Score=187.57  Aligned_cols=225  Identities=18%  Similarity=0.142  Sum_probs=165.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEE-EecCccH--HHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNL--GQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~--~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +||||||||+||++++++|++.|+.|++ +++....  ...+.... ..+++++.+|++|.+.+..+++..     .+|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            6999999999999999999999998655 4432211  11111111 257899999999999988887754     7999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-----CCCEEEEEcCcccccCC----------
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-----HKGCILFTASACTEIAG----------  145 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~iv~~sS~~~~~~~----------  145 (302)
                      |||+|+....      ..+.++..+.+++|+.|+.++++.+.......     +..++|++||...+...          
T Consensus        77 VihlAa~~~~------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          77 VMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEECccccch------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            9999985331      12234557889999999999999998865332     24589999997755321          


Q ss_pred             -----------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-cC---
Q 044670          146 -----------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-LR---  210 (302)
Q Consensus       146 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-~~---  210 (302)
                                 .+...|+.||.+.|.+++.++..   +++++.+++|+.|+||........+.++.......+. +.   
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~---~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g  227 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT---YGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCC
Confidence                       13456999999999999999977   4799999999999999765543345566666554332 11   


Q ss_pred             ---CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          211 ---GQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       211 ---~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                         +.+++++|+|+++..++....   .|+.+++..|..
T Consensus       228 ~~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~  263 (361)
T d1kewa_         228 DQIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNE  263 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             CeEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCC
Confidence               236899999999998886433   478899988765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.4e-22  Score=177.69  Aligned_cols=226  Identities=14%  Similarity=0.123  Sum_probs=163.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc----cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +||||||||+||+++++.|+++|++|++++|..    ............++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            599999999999999999999999999997632    2222222333467899999999999988877754     6999


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC------------CC
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI------------GS  148 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~------------~~  148 (302)
                      |||+|+....      ..+.++.++.+++|+.|+.++++++...    +..++|++||.+.+...+            +.
T Consensus        77 ViHlAa~~~~------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~  146 (338)
T d1udca_          77 VIHFAGLKAV------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTPQ  146 (338)
T ss_dssp             EEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred             EEECCCccch------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCCc
Confidence            9999995321      1233456789999999999999999885    356899999877654322            35


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC------CHHHHHHHHH----hccc----------
Q 044670          149 PAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI------NPAILEAFLS----EMGN----------  208 (302)
Q Consensus       149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~----~~~~----------  208 (302)
                      ..|+.+|.+.+.+++....+.  .++++..++|+.++++.......      ...++..+..    ...+          
T Consensus       147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~  224 (338)
T d1udca_         147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPT  224 (338)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSS
T ss_pred             chHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCccc
Confidence            689999999999999888764  37899999999999986542211      1122222222    1111          


Q ss_pred             ----cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          209 ----LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       209 ----~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                          ..+.+++++|++.+...+.........++++++.++..+
T Consensus       225 ~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         225 EDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             TTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             CCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence                013367899999887766543334446889999888763

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.88  E-value=2.4e-22  Score=178.15  Aligned_cols=221  Identities=15%  Similarity=0.144  Sum_probs=154.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc----cHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD----NLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~----~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      +-|+||||||||+||++++++|+++|+.|.++.++.    ..........+.++.++.+|++|.+.+..++.       .
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~   73 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------K   73 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------h
Confidence            358899999999999999999999998766554431    11111112224688999999999999888765       6


Q ss_pred             ccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------
Q 044670           78 LDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------  145 (302)
Q Consensus        78 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------  145 (302)
                      .|.++|.|+....      .....+..+.+++|+.|+.+++..+...     ..++|++||...+...            
T Consensus        74 ~~~v~~~a~~~~~------~~~~~~~~~~~~~N~~g~~nll~~~~~~-----~~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          74 ADAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY-----DIRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             CSEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhhcccc------cchhhCcccceeeehHhHHhhhhhhccc-----cccccccccceEecccCccccccccccC
Confidence            8889999986432      1122345678999999999999888774     2467777776544211            


Q ss_pred             -----------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc------
Q 044670          146 -----------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN------  208 (302)
Q Consensus       146 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------  208 (302)
                                 .+.+.|+.+|.+.|.+++.+.++   .++++++++|+.|+||...........+.......+.      
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCC
Confidence                       13467999999999999999877   4899999999999998654332223333333332211      


Q ss_pred             -cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          209 -LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       209 -~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                       ..+.+++++|++++++.++....   .|..+++.++..
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~  255 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTKGR---MGETYLIGADGE  255 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHHCC---TTCEEEECCSCE
T ss_pred             CccccccchhhHHHHHHHHHhhcc---cCcccccccccc
Confidence             11458899999999988775443   355555555544

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=8.1e-22  Score=174.48  Aligned_cols=212  Identities=12%  Similarity=0.039  Sum_probs=152.2

Q ss_pred             CEE-EEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HH----HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            4 KVA-IITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQ----ALACKLGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         4 k~v-lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      |+| |||||||+||++++++|+++||+|+.++|..+.     .+    ........+++++.+|++|.+.+.++++..  
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            445 999999999999999999999999999986431     11    112222357899999999999988888765  


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC---------
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA---------  144 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~---------  144 (302)
                         .+++++|.|+....      ....+.....+++|+.|+.+++.++..+... +..++|++||.+.+..         
T Consensus        79 ---~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSHV------KISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             ---CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             ---ccceeeeeeecccc------chhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCC
Confidence               78899999885331      1234455677899999999999998886432 3468999998765422         


Q ss_pred             --CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH----hccc-------cCC
Q 044670          145 --GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS----EMGN-------LRG  211 (302)
Q Consensus       145 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~-------~~~  211 (302)
                        ..+...|+.||.+.|.+++.+++.   +++.+..++|+.+++|.................    ..+.       ..+
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  225 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence              113567999999999999999877   478999999999999865443222222222221    1111       114


Q ss_pred             CCCCHHHHHHHHHHhccCC
Q 044670          212 QVLNAEGIANAALYLATDE  230 (302)
Q Consensus       212 ~~~~~~dva~~~~~l~s~~  230 (302)
                      .+++++|+++++..++...
T Consensus       226 ~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         226 DWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CCEEHHHHHHHHHHHHHSS
T ss_pred             eeeEecHHHHHHHHHhhcC
Confidence            5889999999999888643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.87  E-value=2.1e-22  Score=179.56  Aligned_cols=264  Identities=14%  Similarity=0.061  Sum_probs=179.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++||||||||+||++++++|+++|++|+++++.......  .. .....+..+|+.+.+.+.++++       .+|.+
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~-~~~~~~~~~D~~~~~~~~~~~~-------~~d~V   83 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED-MFCDEFHLVDLRVMENCLKVTE-------GVDHV   83 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG-GTCSEEEECCTTSHHHHHHHHT-------TCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh-cccCcEEEeechhHHHHHHHhh-------cCCeE
Confidence            47789999999999999999999999999999875443111  01 1345778899999988766654       78999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----------------
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----------------  145 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------------  145 (302)
                      ||.|+....     .....+.....+.+|+.++.+++.++...    +..++|++||.......                
T Consensus        84 ih~a~~~~~-----~~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          84 FNLAADMGG-----MGFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             EECCCCCCC-----HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             eeccccccc-----ccccccccccccccccchhhHHHHhHHhh----CccccccccccccccccccccccccccccccCC
Confidence            999986542     11112356788999999999999998884    46789999997665421                


Q ss_pred             --CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHH-----Hhccc-------cCC
Q 044670          146 --IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFL-----SEMGN-------LRG  211 (302)
Q Consensus       146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~-----~~~~~-------~~~  211 (302)
                        .+...|+.||.+.|.+++.+.+++   |++++.++|+.++++................     .....       ..+
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  231 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  231 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE
Confidence              234679999999999999998774   8999999999999987544332221111111     11110       124


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC--------------ccccCCCc--cceeeccCCccccchh
Q 044670          212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS--------------LMKFASPF--HLIKAIGDGCRSFLGI  275 (302)
Q Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~--------------~~~~~~~~--~~~~~~~~~~~~~~g~  275 (302)
                      .+++++|++.++..++...    .|+.+++.+|..++..+              ......+.  ......-+...+.+|+
T Consensus       232 d~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~~~~~~~~~~d~ska~~~LGw  307 (363)
T d2c5aa1         232 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPEGVRGRNSDNNLIKEKLGW  307 (363)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCCCCSBCEECCHHHHHHHSC
T ss_pred             EEeehhHHHHHHHHHHhCC----CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCCCCCccccccCHHHHHHHhCC
Confidence            5899999999999887533    46788888887743211              00000000  0111112223445677


Q ss_pred             HH-HHHHHHHHhhhhcc
Q 044670          276 SF-IAMMCLIHKIQKVI  291 (302)
Q Consensus       276 ~~-~~~~~~~~~~~~~~  291 (302)
                      .+ .+++.++.++++++
T Consensus       308 ~p~~sleegi~~ti~w~  324 (363)
T d2c5aa1         308 APNMRLKEGLRITYFWI  324 (363)
T ss_dssp             CCCCCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHH
Confidence            54 68888888887754

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.87  E-value=1.5e-22  Score=177.78  Aligned_cols=220  Identities=15%  Similarity=0.138  Sum_probs=161.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEE------EecCc--cHHHHHHH-HhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVI------ADVQD--NLGQALAC-KLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~------~~r~~--~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +||||||||+||+++++.|+++|+.|..      .++..  .....+.. ....++.++.+|+++.........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR------   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc------
Confidence            6999999999999999999999986543      33211  11111111 113578999999999987665444      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----------
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----------  145 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------  145 (302)
                       .+|.++|.|+...      ........++.+++|+.++.++++++..    .+..++|++||.+.+...          
T Consensus        76 -~~d~vi~~a~~~~------~~~~~~~~~~~~~~N~~gt~~ll~~~~~----~~~~~~I~~Ss~~~yg~~~~~~~~E~~~  144 (322)
T d1r6da_          76 -GVDAIVHFAAESH------VDRSIAGASVFTETNVQGTQTLLQCAVD----AGVGRVVHVSTNQVYGSIDSGSWTESSP  144 (322)
T ss_dssp             -TCCEEEECCSCCC------HHHHHHCCHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGCCCSSSCBCTTSC
T ss_pred             -ccceEEeeccccc------ccccccchHHHhhhhHHHHHHHHHHHHH----cCCceEEEeecceeecCCCCCCCCCCCC
Confidence             7899999998532      2233455678889999999999999987    346789999998765432          


Q ss_pred             -CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcccc-------CCCCCCHH
Q 044670          146 -IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNL-------RGQVLNAE  217 (302)
Q Consensus       146 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~  217 (302)
                       .+...|+.||.+.|.+++.++++   +++++.+++|+.|+||........+.++.......+..       .+.+++++
T Consensus       145 ~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~  221 (322)
T d1r6da_         145 LEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTD  221 (322)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHH
Confidence             24568999999999999999977   47999999999999997654433445555554432211       13478999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |+|+++..++....   .|+.+++..|...
T Consensus       222 D~a~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         222 DHCRGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             HHHHHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             HHHHHHHHHHhCCC---CCCeeEEeecccc
Confidence            99999999986544   4889999888774

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.87  E-value=5.7e-21  Score=168.80  Aligned_cols=224  Identities=17%  Similarity=0.111  Sum_probs=165.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----HHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----LGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +-|++|||||||+||++++++|.++|++|++++|...    .........    ...+.++.+|+.|.........    
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA----   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT----
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc----
Confidence            4589999999999999999999999999999986332    111121111    2568999999999988665554    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-------
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-------  146 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-------  146 (302)
                         ..+.++|.++....      ..+.++....+++|+.|+.++++++...    +..++|++||...+...+       
T Consensus        91 ---~~~~v~~~~a~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~  157 (341)
T d1sb8a_          91 ---GVDYVLHQAALGSV------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKVED  157 (341)
T ss_dssp             ---TCSEEEECCSCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ---cccccccccccccc------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCccCC
Confidence               78999998875321      1245667889999999999999999873    456899999987654322       


Q ss_pred             ----CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC----HHHHHHHHHhccc-c------CC
Q 044670          147 ----GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN----PAILEAFLSEMGN-L------RG  211 (302)
Q Consensus       147 ----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~~-~------~~  211 (302)
                          +...|+.||.+.|.+++.+++..   ++++.+++|+.++++........    +..........+. +      .+
T Consensus       158 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r  234 (341)
T d1sb8a_         158 TIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSR  234 (341)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEE
Confidence                45789999999999999999774   79999999999999876544332    2333444433221 1      14


Q ss_pred             CCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          212 QVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       212 ~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      .+++++|++.++..++..... ..|+.+++..+..
T Consensus       235 ~~i~v~D~~~a~~~~~~~~~~-~~~~~~~~~~~~~  268 (341)
T d1sb8a_         235 DFCYIENTVQANLLAATAGLD-ARNQVYNIAVGGR  268 (341)
T ss_dssp             CCEEHHHHHHHHHHHHTCCGG-GCSEEEEESCSCC
T ss_pred             EEEEEeccchhhhhhhhcccc-ccceeeeeccccc
Confidence            588999999998887754332 3577888877665

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.86  E-value=7.9e-21  Score=167.39  Aligned_cols=214  Identities=17%  Similarity=0.031  Sum_probs=151.8

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-----HHHHH----HHHhCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-----LGQAL----ACKLGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~----~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++|||||||+||+++++.|+++||+|++++|..+     +...+    .......+.++.+|+++.+++...++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            79999999999999999999999999999998533     11111    1111356789999999999988887754   


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccC-CCCEEEEEcCcccccC---------
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQ-HKGCILFTASACTEIA---------  144 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~iv~~sS~~~~~~---------  144 (302)
                        ++|+|||+|+....      ....++....+.+|+.++.+++.++....... ...++++.||......         
T Consensus        79 --~~D~Vih~Aa~~~~------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~  150 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  150 (339)
T ss_dssp             --CCSEEEECCSCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --ccchhhhccccccc------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCC
Confidence              79999999996431      12335667899999999999998887654332 2345666665543222         


Q ss_pred             -CCCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHH----hcccc-------CCC
Q 044670          145 -GIGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLS----EMGNL-------RGQ  212 (302)
Q Consensus       145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~----~~~~~-------~~~  212 (302)
                       ..+...|+.||.+.|.+++.+.++   +++++++++|+.|+||.................    ..+.+       .+.
T Consensus       151 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd  227 (339)
T d1n7ha_         151 PFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRD  227 (339)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEE
T ss_pred             CCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCcccc
Confidence             124568999999999999999877   479999999999999976543322222222111    11111       134


Q ss_pred             CCCHHHHHHHHHHhccCCC
Q 044670          213 VLNAEGIANAALYLATDEA  231 (302)
Q Consensus       213 ~~~~~dva~~~~~l~s~~~  231 (302)
                      +++++|+++++..++..+.
T Consensus       228 ~~~v~D~a~~~~~~~~~~~  246 (339)
T d1n7ha_         228 WGFAGDYVEAMWLMLQQEK  246 (339)
T ss_dssp             CEEHHHHHHHHHHHHTSSS
T ss_pred             ceeeehHHHHHHHHHhcCC
Confidence            7899999999998886543

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=6.1e-21  Score=166.95  Aligned_cols=222  Identities=15%  Similarity=0.048  Sum_probs=157.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH-HHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ-ALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||||||||+||++++++|+++||+|+.++|...... ...+.+  ..++.++.+|++|.+++.+++...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            78999999999999999999999999999998654211 112222  256899999999999988877765     6788


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCCh
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSP  149 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~  149 (302)
                      ++|+|+....      ....+.....+++|+.|+.+++.++...-   ...++++.||......           ..+..
T Consensus        76 ~~~~a~~~~~------~~~~~~~~~~~~~n~~g~~~~l~~~~~~~---~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~  146 (321)
T d1rpna_          76 VYNLAAQSFV------GASWNQPVTTGVVDGLGVTHLLEAIRQFS---PETRFYQASTSEMFGLIQAERQDENTPFYPRS  146 (321)
T ss_dssp             EEECCSCCCH------HHHTTSHHHHHHHHTHHHHHHHHHHHHHC---TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             cccccccccc------cccccchHHHHhhhhhchHHHHHHHHHhC---CCcccccccchhhcCcccCCCCCCCCCccccC
Confidence            8998875432      11122457889999999999999888752   2446777776543321           12457


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHH---HHhcccc--------CCCCCCHHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAF---LSEMGNL--------RGQVLNAEG  218 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~d  218 (302)
                      .|+.||.+.|.+++.++.+   +++++.+++|+.+++|..............+   .....+.        .+.+++++|
T Consensus       147 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D  223 (321)
T d1rpna_         147 PYGVAKLYGHWITVNYRES---FGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD  223 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHH
T ss_pred             hhHHHHHHHHHHHHHHHhh---cCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHH
Confidence            8999999999999999877   4799999999999999754432222222211   1111111        134789999


Q ss_pred             HHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          219 IANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       219 va~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                      +++++..++....    +..+++.++..
T Consensus       224 ~~~~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         224 YVEAMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             HHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHHHHhcCC----cCCceeccccc
Confidence            9999999885443    34567777655

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.4e-20  Score=166.46  Aligned_cols=273  Identities=13%  Similarity=0.067  Sum_probs=182.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC----------ccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ----------DNLGQALACKLGEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      |+ |+||||||||+||++++++|+++|++|+++++.          .............++.++.+|++|.+.+.+++..
T Consensus         1 M~-kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~   79 (346)
T d1ek6a_           1 MA-EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK   79 (346)
T ss_dssp             CC-SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CC-CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc
Confidence            44 689999999999999999999999999998641          1122333333457889999999999998887765


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----  145 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----  145 (302)
                      .     .+++++|.|+....      ..+.++..+.+++|+.|+.+++.++..    .+..+++++||.......     
T Consensus        80 ~-----~~~~i~h~Aa~~~~------~~~~~~p~~~~~~Nv~gt~~l~~~~~~----~~v~~~i~~ss~~~~~~~~~~~~  144 (346)
T d1ek6a_          80 Y-----SFMAVIHFAGLKAV------GESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPL  144 (346)
T ss_dssp             C-----CEEEEEECCSCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             c-----ccccccccccccCc------HhhHhCHHHHHHhhhcccccccchhhh----cCcccccccccceeeeccccccc
Confidence            3     68899999996432      123345678899999999999988876    456689999887655432     


Q ss_pred             -------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCC------CCHHHHHHH----HHhccc
Q 044670          146 -------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNS------INPAILEAF----LSEMGN  208 (302)
Q Consensus       146 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------~~~~~~~~~----~~~~~~  208 (302)
                             .....|+.+|.+.+..++.+++.  ..++....++|+.++++......      ....+...+    .....+
T Consensus       145 ~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (346)
T d1ek6a_         145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (346)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             cccccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCc
Confidence                   24457999999999999887754  24789999999999997543211      111122222    111100


Q ss_pred             --------------cCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcccCCCC--------------ccccCCCcc
Q 044670          209 --------------LRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFSVANPS--------------LMKFASPFH  260 (302)
Q Consensus       209 --------------~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~~~~~--------------~~~~~~~~~  260 (302)
                                    ..+.+++++|+|.++..++........++++++.++...+..+              ......++.
T Consensus       223 i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~~~~  302 (346)
T d1ek6a_         223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARREG  302 (346)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCCTT
T ss_pred             EEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCCCCC
Confidence                          0135789999999988776544444568899999887743111              100000111


Q ss_pred             ceeecc---CCccccchhHH-HHHHHHHHhhhhcc
Q 044670          261 LIKAIG---DGCRSFLGISF-IAMMCLIHKIQKVI  291 (302)
Q Consensus       261 ~~~~~~---~~~~~~~g~~~-~~~~~~~~~~~~~~  291 (302)
                      .....+   ++..+.+|+++ .++++++.++++.+
T Consensus       303 e~~~~~~d~~k~~~~lgw~p~~slee~I~~~i~w~  337 (346)
T d1ek6a_         303 DVAACYANPSLAQEELGWTAALGLDRMCEDLWRWQ  337 (346)
T ss_dssp             CCSEECBCCHHHHHTTCCCCCCCHHHHHHHHHHHH
T ss_pred             CCCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHHH
Confidence            111111   22234567754 57888998888753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=7.9e-21  Score=166.04  Aligned_cols=214  Identities=16%  Similarity=0.093  Sum_probs=150.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc-HHHHHHHHh-CCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN-LGQALACKL-GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      |+||||||+|+||++++++|+++|++|++++|... ..+.+.... ..++.....|+.+.     ++       .++|+|
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-----~~-------~~~d~V   69 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LY-------IEVDQI   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CC-------CCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH-----HH-------cCCCEE
Confidence            78999999999999999999999999999986332 211111111 23456666665432     11       269999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC----------------C
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA----------------G  145 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~----------------~  145 (302)
                      ||+|+....   +   ...++..+.+++|+.++.++++++...    + .++|++||.+.+..                .
T Consensus        70 ihlAa~~~~---~---~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~  138 (312)
T d2b69a1          70 YHLASPASP---P---NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI  138 (312)
T ss_dssp             EECCSCCSH---H---HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred             EECcccCCc---h---hHHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence            999986431   1   111245678999999999999988763    2 47999998765432                1


Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--CHHHHHHHHHhcccc-------CCCCCCH
Q 044670          146 IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--NPAILEAFLSEMGNL-------RGQVLNA  216 (302)
Q Consensus       146 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~  216 (302)
                      .+...|+.||.+.|.+++.++.+   +|+++.+++|+.|+||.......  .+.++.......+..       .+.++++
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v  215 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYV  215 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHH---hCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEH
Confidence            24568999999999999999987   48999999999999997654321  234555544432211       1357899


Q ss_pred             HHHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          217 EGIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       217 ~dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      +|+++++..++...    .+..+++.+|...
T Consensus       216 ~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         216 SDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             HHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             HHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            99999998887533    3556888887774

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.3e-20  Score=166.34  Aligned_cols=218  Identities=11%  Similarity=0.076  Sum_probs=157.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      +||||||||+||++++++|+++| ++|+++++..+.......  ..+++++.+|+++.+++.+.+.+      .+|+|||
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~--~~~~~~i~~Di~~~~~~~~~~~~------~~d~Vih   73 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN--HPHFHFVEGDISIHSEWIEYHVK------KCDVVLP   73 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT--CTTEEEEECCTTTCSHHHHHHHH------HCSEEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc--CCCeEEEECccCChHHHHHHHHh------CCCcccc
Confidence            69999999999999999999999 589988876654433322  35789999999988765443321      5899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC-----------------
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI-----------------  146 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~-----------------  146 (302)
                      +|+....      ....++....+++|+.|+.+++.++...     ..+.+++||...+....                 
T Consensus        74 ~a~~~~~------~~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~  142 (342)
T d2blla1          74 LVAIATP------IEYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN  142 (342)
T ss_dssp             CBCCCCH------HHHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT
T ss_pred             ccccccc------cccccCCccccccccccccccccccccc-----cccccccccccccccccccccccccccccccccC
Confidence            9996542      1123445678999999999999998773     34567777766543321                 


Q ss_pred             -CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC--------CHHHHHHHHHhccc-------cC
Q 044670          147 -GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI--------NPAILEAFLSEMGN-------LR  210 (302)
Q Consensus       147 -~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--------~~~~~~~~~~~~~~-------~~  210 (302)
                       +...|+.||.+.|.+++.+++++   |++++.++|+.+.++.......        ...++.......+.       ..
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~  219 (342)
T d2blla1         143 KPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  219 (342)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCE
T ss_pred             CCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCee
Confidence             23579999999999999999774   8999999999999986544321        12333333333221       11


Q ss_pred             CCCCCHHHHHHHHHHhccCCCCCccccEEeeCCC
Q 044670          211 GQVLNAEGIANAALYLATDEASDVTGLNLVVDGG  244 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG  244 (302)
                      +.+++++|+++++..++........|+.+++.+|
T Consensus       220 r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         220 RCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eeecccccccceeeeehhhccccCCCeEEEEecc
Confidence            3488999999999999876444456899998544

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.84  E-value=9.2e-20  Score=161.53  Aligned_cols=214  Identities=16%  Similarity=0.068  Sum_probs=157.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +||+||||||||+||+++++.|+++|++|++++|+......+....  ...++++.+|++|++.+.++++..     .+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hhh
Confidence            6899999999999999999999999999999999876544443332  356899999999999988877765     789


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC------------CC
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG------------IG  147 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~------------~~  147 (302)
                      +++|.|+...      ...+.+..+..+.+|+.|+.+++.++...-   ....+++.||.......            .+
T Consensus        82 ~v~~~aa~~~------~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p  152 (356)
T d1rkxa_          82 IVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHVG---GVKAVVNITSDKCYDNKEWIWGYRENEAMGG  152 (356)
T ss_dssp             EEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHHC---CCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred             hhhhhhcccc------ccccccCCccccccccccchhhhhhhhccc---cccccccccccccccccccccccccccccCC
Confidence            9999998533      222345667899999999999999998852   33455555554433221            14


Q ss_pred             ChhHHHHHHHHHHHHHHHHHHHC------CCCcEEEEEeCCcccCCcccCCCCC-HHHHHHHHHhcccc------CCCCC
Q 044670          148 SPAYTVSKYGIIALVKILAAELR------QYGLRVNCVSPYGLVSGISSRNSIN-PAILEAFLSEMGNL------RGQVL  214 (302)
Q Consensus       148 ~~~Y~~sK~a~~~~~~~la~e~~------~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~  214 (302)
                      ...|+.+|...+.+++.++.++.      .+++.+..++|+.+++|........ +.+........+..      .+.+.
T Consensus       153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  232 (356)
T d1rkxa_         153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ  232 (356)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred             CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccc
Confidence            56799999999999999888763      2478999999999999876433221 22333333222111      13467


Q ss_pred             CHHHHHHHHHHhccC
Q 044670          215 NAEGIANAALYLATD  229 (302)
Q Consensus       215 ~~~dva~~~~~l~s~  229 (302)
                      +++|++.++..++..
T Consensus       233 ~v~D~~~a~~~~~~~  247 (356)
T d1rkxa_         233 HVLEPLSGYLLLAQK  247 (356)
T ss_dssp             ETHHHHHHHHHHHHH
T ss_pred             ccccccchhhhhhhh
Confidence            899999998877753

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=3.9e-20  Score=163.81  Aligned_cols=228  Identities=16%  Similarity=0.146  Sum_probs=158.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc----HHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN----LGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      |+||||||||+||++++++|+++|++|+++++...    ...........+++++.+|++|.+.++.++...     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            79999999999999999999999999999875322    222223333567899999999999988877643     799


Q ss_pred             EEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC--------------
Q 044670           80 IMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG--------------  145 (302)
Q Consensus        80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~--------------  145 (302)
                      +|||+|+....      ....+..+..+.+|+.++.+++.++...    +..++|++||...+...              
T Consensus        77 ~VihlAa~~~~------~~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~  146 (347)
T d1z45a2          77 SVIHFAGLKAV------GESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIPEECP  146 (347)
T ss_dssp             EEEECCSCCCH------HHHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred             EEEEccccccc------cccccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCccccccC
Confidence            99999996431      1123345678899999999999998874    35689999997655321              


Q ss_pred             -CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC------CHHHHHHHHH----hcccc-----
Q 044670          146 -IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI------NPAILEAFLS----EMGNL-----  209 (302)
Q Consensus       146 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~------~~~~~~~~~~----~~~~~-----  209 (302)
                       .+...|+.||.+.|.+++.+.... ..++++..++|+.++++.......      ....+.....    ...++     
T Consensus       147 ~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~  225 (347)
T d1z45a2         147 LGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGD  225 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC--
T ss_pred             CCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCC
Confidence             134679999999999999998663 358999999999998765432111      1122222211    11111     


Q ss_pred             ---------CCCCCCHHHHHHHHHHhcc----CCCCCccccEEeeCCCccc
Q 044670          210 ---------RGQVLNAEGIANAALYLAT----DEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       210 ---------~~~~~~~~dva~~~~~l~s----~~~~~~~G~~~~~~gG~~~  247 (302)
                               .+.+.++.+.+.+++.++.    .......++.+++.+|...
T Consensus       226 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~  276 (347)
T d1z45a2         226 DYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGS  276 (347)
T ss_dssp             ----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCE
T ss_pred             CccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcc
Confidence                     1234556667776655542    2223346788999887764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.83  E-value=2.6e-19  Score=157.05  Aligned_cols=223  Identities=16%  Similarity=0.156  Sum_probs=153.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc--cHHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQD--NLGQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +||||||||+||++++++|+++|++|+++++-.  .....+... ...+++++.+|++|.+++.++++..     ++|+|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            589999999999999999999999999987532  222222111 1367899999999999988888765     78999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC----------------
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG----------------  145 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~----------------  145 (302)
                      ||+|+....      ....++.+..+++|+.|+.++++++...    +..+.++.||.....+.                
T Consensus        77 ih~aa~~~~------~~~~~~~~~~~~~Nv~gt~nll~~~~~~----~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQY----NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc------cccccChHHHHHHHHHHHHHHHHhhhcc----ccccccccccccccccccccccccccccccccc
Confidence            999986432      1223456789999999999999988874    33445555554433221                


Q ss_pred             ------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCC---CHHHHHHHHHhcc---
Q 044670          146 ------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSI---NPAILEAFLSEMG---  207 (302)
Q Consensus       146 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~---  207 (302)
                                  .+...|+.+|...+.+.......+   ++....+.|..++++.......   ...+.........   
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN  223 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhcc---CcccccccccceeeccccccccccccchhhHHHHHHHhccC
Confidence                        135679999999999999988775   5676777766666554432221   2334433332110   


Q ss_pred             ---------ccCCCCCCHHHHHHHHHHhccCCCCCccccEEeeCCCcc
Q 044670          208 ---------NLRGQVLNAEGIANAALYLATDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       208 ---------~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~~~~~gG~~  246 (302)
                               ...+.+++++|++++++.++... ....|+++++.+|..
T Consensus       224 ~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~~  270 (338)
T d1orra_         224 KPFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTIV  270 (338)
T ss_dssp             CCEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCGG
T ss_pred             CceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCcccccccccc
Confidence                     01134778999999999887542 234688888866643

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.83  E-value=5.5e-19  Score=158.36  Aligned_cols=229  Identities=16%  Similarity=0.139  Sum_probs=159.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEecC---------ccHHHHHHHH---h--------CCCeEEEEecCCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHE-NGAKVVIADVQ---------DNLGQALACK---L--------GEDVCYIHCDVTS   60 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~r~---------~~~~~~~~~~---~--------~~~~~~~~~Dl~~   60 (302)
                      ++.+||||||+|+||++++++|++ .|++|+++++-         ....+.....   .        .....++.+|++|
T Consensus         1 ~~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (383)
T d1gy8a_           1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN   80 (383)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccC
Confidence            467899999999999999999986 68999998741         1111222111   1        2457889999999


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcc
Q 044670           61 EDEITNLVDTAVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASAC  140 (302)
Q Consensus        61 ~~~v~~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~  140 (302)
                      .+.++++++.    ..++|+|+|.|+....      ....+.....+++|+.++.+++.++...    +..++++++|..
T Consensus        81 ~~~l~~~~~~----~~~~d~ViH~Aa~~~~------~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~  146 (383)
T d1gy8a_          81 EDFLNGVFTR----HGPIDAVVHMCAFLAV------GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHH----SCCCCEEEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGG
T ss_pred             HHHhhhhhhc----cceeehhhcccccccc------cccccccccccccccccccccchhhhcc----CCcccccccccc
Confidence            9997776653    4578999999996432      1223455678899999999999988873    456787777665


Q ss_pred             cccCC------------------CCChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC-------
Q 044670          141 TEIAG------------------IGSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN-------  195 (302)
Q Consensus       141 ~~~~~------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~-------  195 (302)
                      .....                  .+...|+.||.+.+.+++.+...   +|+++.+++|+.++||........       
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~  223 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRYFNACGAHEDGDIGEHYQGSTH  223 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECEEECCCTTSSCSCCSTTCCS
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEecceeeccCccccccccccccch
Confidence            43321                  13567999999999999999876   489999999999999977543211       


Q ss_pred             --HHHHHHHHHhcc-----------------------------ccCCCCCCHHHHHHHHHHhccC------CCCCccccE
Q 044670          196 --PAILEAFLSEMG-----------------------------NLRGQVLNAEGIANAALYLATD------EASDVTGLN  238 (302)
Q Consensus       196 --~~~~~~~~~~~~-----------------------------~~~~~~~~~~dva~~~~~l~s~------~~~~~~G~~  238 (302)
                        +..+........                             ...+.+++++|++++++.++..      ......+++
T Consensus       224 ~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i  303 (383)
T d1gy8a_         224 LIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSV  303 (383)
T ss_dssp             HHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEE
T ss_pred             hHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccE
Confidence              122222221100                             0012467899999999887642      112345789


Q ss_pred             EeeCCCccc
Q 044670          239 LVVDGGFSV  247 (302)
Q Consensus       239 ~~~~gG~~~  247 (302)
                      +++.+|..+
T Consensus       304 ~Ni~s~~~~  312 (383)
T d1gy8a_         304 FNLGTSRGY  312 (383)
T ss_dssp             EEESCSCCE
T ss_pred             EEeCCCCce
Confidence            999888763

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=9.2e-20  Score=159.01  Aligned_cols=192  Identities=16%  Similarity=0.202  Sum_probs=142.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      -|+||||||||+||++++++|+++|+.|+++++..+                 +|+.+.+.+.++++.-     .+|.++
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~-----------------~~~~~~~~~~~~~~~~-----~~d~v~   59 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE-----------------LNLLDSRAVHDFFASE-----RIDQVY   59 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT-----------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh-----------------ccccCHHHHHHHHhhc-----CCCEEE
Confidence            478999999999999999999999999987754322                 5899999988877643     789999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCC----------------
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGI----------------  146 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~----------------  146 (302)
                      |+|+....     ......+..+.+++|+.++.+++.++...    +..++|++||.+.+.+..                
T Consensus        60 ~~a~~~~~-----~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~  130 (315)
T d1e6ua_          60 LAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  130 (315)
T ss_dssp             ECCCCCCC-----HHHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             Ecchhccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCccccCCCCC
Confidence            99975431     11123455677899999999999988773    456899999987654321                


Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHH----HHHHH-HH---hcc--------ccC
Q 044670          147 GSPAYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPA----ILEAF-LS---EMG--------NLR  210 (302)
Q Consensus       147 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~----~~~~~-~~---~~~--------~~~  210 (302)
                      +...|+.||.+.|.+++.+.++.   |+++++++|+.|+||..........    ..... ..   ...        ...
T Consensus       131 ~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  207 (315)
T d1e6ua_         131 TNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  207 (315)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE
Confidence            23469999999999999998774   8999999999999997654322211    11111 11   000        112


Q ss_pred             CCCCCHHHHHHHHHHhcc
Q 044670          211 GQVLNAEGIANAALYLAT  228 (302)
Q Consensus       211 ~~~~~~~dva~~~~~l~s  228 (302)
                      +.+.+++|++.++..++.
T Consensus       208 ~~~~~v~d~~~~~~~~~~  225 (315)
T d1e6ua_         208 REFLHVDDMAAASIHVME  225 (315)
T ss_dssp             ECEEEHHHHHHHHHHHHH
T ss_pred             EEEEEeehhHHHHHHhhh
Confidence            457899999999988774

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=5.5e-22  Score=161.27  Aligned_cols=149  Identities=17%  Similarity=0.171  Sum_probs=110.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG--EDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+||+++||||++|||++++++|+++|++|++++|+.++.+++.+.+.  ..+....+|++|.+++++++.       ++
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~i   93 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------GA   93 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------TC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc-------Cc
Confidence            689999999999999999999999999999999999988887766652  345668899999999877664       89


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-CCCChhHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-GIGSPAYTVSKYG  157 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-~~~~~~Y~~sK~a  157 (302)
                      |+||||||..      ....+.++|++.+++|+.+.++.+..+.+.+.... .....+++...... ..+...|+.+|++
T Consensus        94 Dilin~Ag~g------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~g~~~y~~sk~a  166 (191)
T d1luaa1          94 HFVFTAGAIG------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDAT-DKGKEYGGKRAFGALGIGGLKLKLHRAC  166 (191)
T ss_dssp             SEEEECCCTT------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTT-CEEEEETTEEEECHHHHHHHHHHHHHHH
T ss_pred             CeeeecCccc------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhc-cCcEEecceEEEeccCcCcHHHHHHHHH
Confidence            9999999953      34568899999999999888776544433332221 22222222222111 1233579999999


Q ss_pred             HHHHHH
Q 044670          158 IIALVK  163 (302)
Q Consensus       158 ~~~~~~  163 (302)
                      +..+++
T Consensus       167 ~~~l~~  172 (191)
T d1luaa1         167 IAKLFE  172 (191)
T ss_dssp             HHHHTS
T ss_pred             HHHHHh
Confidence            887663

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.3e-19  Score=148.66  Aligned_cols=199  Identities=14%  Similarity=0.063  Sum_probs=138.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |..|+|+||||||+||++++++|+++|++|+++.|+.++....   ....++++.+|++|.+++.++++       ..|+
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~gD~~d~~~l~~al~-------~~d~   70 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE---GPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS---SCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc---cccccccccccccchhhHHHHhc-------CCCE
Confidence            6789999999999999999999999999999999988764332   23568899999999999888776       7899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCC----ChhHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIG----SPAYTVSKY  156 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~----~~~Y~~sK~  156 (302)
                      |||++|....    ....         +++..++.++++++..    .+..++|++||.........    ...|...|.
T Consensus        71 vi~~~g~~~~----~~~~---------~~~~~~~~~l~~aa~~----~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~  133 (205)
T d1hdoa_          71 VIVLLGTRND----LSPT---------TVMSEGARNIVAAMKA----HGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHI  133 (205)
T ss_dssp             EEECCCCTTC----CSCC---------CHHHHHHHHHHHHHHH----HTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHH
T ss_pred             EEEEeccCCc----hhhh---------hhhHHHHHHHHHHHHh----cCCCeEEEEeeeeccCCCccccccccccchHHH
Confidence            9999986432    1111         2334455555555544    56789999998765443322    235677776


Q ss_pred             HHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCCCccc
Q 044670          157 GIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEASDVTG  236 (302)
Q Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G  236 (302)
                      ..+.+.+       ..+++.++|+||.+.+..........      ..  ......+++.+|+|++++.++..+.  ..|
T Consensus       134 ~~e~~l~-------~~~~~~tiirp~~~~~~~~~~~~~~~------~~--~~~~~~~i~~~DvA~~~~~~l~~~~--~~g  196 (205)
T d1hdoa_         134 RMHKVLR-------ESGLKYVAVMPPHIGDQPLTGAYTVT------LD--GRGPSRVISKHDLGHFMLRCLTTDE--YDG  196 (205)
T ss_dssp             HHHHHHH-------HTCSEEEEECCSEEECCCCCSCCEEE------SS--SCSSCSEEEHHHHHHHHHHTTSCST--TTT
T ss_pred             HHHHHHH-------hcCCceEEEecceecCCCCcccEEEe------eC--CCCCCCcCCHHHHHHHHHHHhCCCC--CCC
Confidence            6664433       35899999999998754332211000      00  1111447899999999999996543  458


Q ss_pred             cEEeeCC
Q 044670          237 LNLVVDG  243 (302)
Q Consensus       237 ~~~~~~g  243 (302)
                      +.+.+.+
T Consensus       197 ~~~~~s~  203 (205)
T d1hdoa_         197 HSTYPSH  203 (205)
T ss_dssp             CEEEEEC
T ss_pred             EEEecCC
Confidence            8776654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=3.7e-19  Score=148.76  Aligned_cols=198  Identities=15%  Similarity=0.123  Sum_probs=140.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      |++|+||||||||+||++++++|+++|.  +|++++|++......   ....+....+|+.+.+++...+.       ..
T Consensus        12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~---~~~~i~~~~~D~~~~~~~~~~~~-------~~   81 (232)
T d2bkaa1          12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---AYKNVNQEVVDFEKLDDYASAFQ-------GH   81 (232)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---GGGGCEEEECCGGGGGGGGGGGS-------SC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc---ccceeeeeeeccccccccccccc-------cc
Confidence            5789999999999999999999999995  899999976542221   11356777788888776555444       78


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGI  158 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  158 (302)
                      |++||++|...         .........++|+.++.++++.+..    .+..++|++||......  ....|+.+|...
T Consensus        82 d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~~~--~~~~Y~~~K~~~  146 (232)
T d2bkaa1          82 DVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADKS--SNFLYLQVKGEV  146 (232)
T ss_dssp             SEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCTT--CSSHHHHHHHHH
T ss_pred             ccccccccccc---------cccchhhhhhhcccccceeeecccc----cCccccccCCccccccC--ccchhHHHHHHh
Confidence            99999998532         2345567788999999999988876    45778999999876543  345799999888


Q ss_pred             HHHHHHHHHHHCCCCc-EEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc--cCCCCCCHHHHHHHHHHhccCCC
Q 044670          159 IALVKILAAELRQYGL-RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN--LRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      |...+.       .+. ++.+++||.++++...... .......++...+.  .....++++|+|++++.++..+.
T Consensus       147 E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         147 EAKVEE-------LKFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHT-------TCCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             hhcccc-------ccccceEEecCceeecCCCcCcH-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            765543       244 5788999999998654321 11222222222211  11335788999999988876544

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=2e-18  Score=143.86  Aligned_cols=218  Identities=12%  Similarity=0.009  Sum_probs=143.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE--EEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK--VVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      =++||||||||+||++++++|+++|+.  |+...|+++....    +...++++.+|+++.+++.++++       .+|.
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   71 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----IGGEADVFIGDITDADSINPAFQ-------GIDA   71 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----TTCCTTEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----ccCCcEEEEeeeccccccccccc-------ccee
Confidence            379999999999999999999999976  5556677655433    34577899999999999887776       7899


Q ss_pred             EEEcccCCCCCCC-------CCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           81 MYNNAGIVDRGFA-------SVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        81 lv~~Ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +||+|+.......       .........+.....+|+.++..++.......    .+...+.++.....+..+...|..
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~~~~~~~~  147 (252)
T d2q46a1          72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDHPLNKLGN  147 (252)
T ss_dssp             EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCcccccccc
Confidence            9999987542100       01111123455677889999988887777643    567777777665554443333333


Q ss_pred             HHHHHH-HHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCCC
Q 044670          154 SKYGII-ALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEAS  232 (302)
Q Consensus       154 sK~a~~-~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~  232 (302)
                      ++.... .....+..+   .|+++.+++||.++++............    .........+++++|+|++++.++..+. 
T Consensus       148 ~~~~~~~~~~~~~~~~---~~~~~~ilRp~~v~g~~~~~~~~~~~~~----~~~~~~~~~~i~~~Dva~a~~~~l~~~~-  219 (252)
T d2q46a1         148 GNILVWKRKAEQYLAD---SGTPYTIIRAGGLLDKEGGVRELLVGKD----DELLQTDTKTVPRADVAEVCIQALLFEE-  219 (252)
T ss_dssp             CCHHHHHHHHHHHHHH---SSSCEEEEEECEEECSCTTSSCEEEEST----TGGGGSSCCEEEHHHHHHHHHHHTTCGG-
T ss_pred             cchhhhhhhhhhhhhc---ccccceeecceEEECCCcchhhhhhccC----cccccCCCCeEEHHHHHHHHHHHhCCcc-
Confidence            332222 222333333   5899999999999998654321110000    0001111457899999999999886543 


Q ss_pred             CccccEEeeCCC
Q 044670          233 DVTGLNLVVDGG  244 (302)
Q Consensus       233 ~~~G~~~~~~gG  244 (302)
                       ..|++|++.++
T Consensus       220 -~~g~~~~i~~~  230 (252)
T d2q46a1         220 -AKNKAFDLGSK  230 (252)
T ss_dssp             -GTTEEEEEEEC
T ss_pred             -ccCcEEEEeeC
Confidence             36889988654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.71  E-value=4.6e-17  Score=138.96  Aligned_cols=195  Identities=17%  Similarity=0.112  Sum_probs=136.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      .+||||||||+||++++++|.++|++|+.++|++                  +|++|.++++++++..     ++|+|||
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~------------------~D~~d~~~~~~~l~~~-----~~d~vih   58 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD------------------LDITNVLAVNKFFNEK-----KPNVVIN   58 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT------------------CCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh------------------ccCCCHHHHHHHHHHc-----CCCEEEe
Confidence            4699999999999999999999999999998753                  4999999988888765     7899999


Q ss_pred             cccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC-----------CCCChhHH
Q 044670           84 NAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA-----------GIGSPAYT  152 (302)
Q Consensus        84 ~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~-----------~~~~~~Y~  152 (302)
                      +|+....      +......+..+..|+.....+.......     ...+++.||......           ..+...|+
T Consensus        59 ~a~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~  127 (281)
T d1vl0a_          59 CAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSV-----GAEIVQISTDYVFDGEAKEPITEFDEVNPQSAYG  127 (281)
T ss_dssp             CCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHH-----TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHH
T ss_pred             ecccccc------ccccccchhhcccccccccccccccccc-----cccccccccceeeeccccccccccccccchhhhh
Confidence            9986431      1223345677788888887777766663     245666666543322           12456799


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHhc
Q 044670          153 VSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAALYLA  227 (302)
Q Consensus       153 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~  227 (302)
                      .+|...+.+.+.       .+.+...++|++++++....   ...+..........     ..+.+.+++|+++++..++
T Consensus       128 ~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~  197 (281)
T d1vl0a_         128 KTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF---VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVI  197 (281)
T ss_dssp             HHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH---HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHH-------hCCCccccceeEEeCCCccc---ccchhhhhccCCceeecCCceeccchhhhhhhhhhhhh
Confidence            999887766543       25678899999999986421   22333333332111     1145889999999999998


Q ss_pred             cCCCCCccccEEeeCCCcc
Q 044670          228 TDEASDVTGLNLVVDGGFS  246 (302)
Q Consensus       228 s~~~~~~~G~~~~~~gG~~  246 (302)
                      ....   +| .+++.++..
T Consensus       198 ~~~~---~g-~~~~~~~~~  212 (281)
T d1vl0a_         198 DEKN---YG-TFHCTCKGI  212 (281)
T ss_dssp             HHTC---CE-EEECCCBSC
T ss_pred             hhcc---cC-ceeEeCCCc
Confidence            6543   35 555555544

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.62  E-value=1.7e-16  Score=130.34  Aligned_cols=190  Identities=16%  Similarity=0.099  Sum_probs=122.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|+||||||||+||++++++|+++|+  +|+...|++...       ...   +..+..|..++..      ...+.+|.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~-------~~~---~~~~~~d~~~~~~------~~~~~~d~   65 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE-------HPR---LDNPVGPLAELLP------QLDGSIDT   65 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC-------CTT---EECCBSCHHHHGG------GCCSCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh-------ccc---ccccccchhhhhh------ccccchhe
Confidence            58999999999999999999999998  566666654321       112   2344555443221      11246899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      +||++|....        .....+...++|+.++.++++++..    .+..+++++||..+..  .....|..+|...|.
T Consensus        66 vi~~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~  131 (212)
T d2a35a1          66 AFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA--KSSIFYNRVKGELEQ  131 (212)
T ss_dssp             EEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT--TCSSHHHHHHHHHHH
T ss_pred             eeeeeeeecc--------ccccccccccchhhhhhhccccccc----cccccccccccccccc--ccccchhHHHHHHhh
Confidence            9999985421        0112356788999999999988766    4567899999976653  345689999988776


Q ss_pred             HHHHHHHHHCCCCc-EEEEEeCCcccCCcccCCCCCHHHHHHHHHhccccCCCCCCHHHHHHHHHHhccCCC
Q 044670          161 LVKILAAELRQYGL-RVNCVSPYGLVSGISSRNSINPAILEAFLSEMGNLRGQVLNAEGIANAALYLATDEA  231 (302)
Q Consensus       161 ~~~~la~e~~~~gi-~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  231 (302)
                      +.+       ..+. +.+.++|+.|+++......  ............+...+.++++|+|++++.++..+.
T Consensus       132 ~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         132 ALQ-------EQGWPQLTIARPSLLFGPREEFRL--AEILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHT-------TSCCSEEEEEECCSEESTTSCEEG--GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hcc-------ccccccceeeCCcceeCCcccccH--HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            543       2344 5889999999998643210  000000000000000123689999999999886543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.56  E-value=1.7e-14  Score=124.26  Aligned_cols=206  Identities=8%  Similarity=-0.020  Sum_probs=127.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH-----HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL-----GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||||||||+||++++++|+++|++|+++.|+...     ...........++++.+|++|.+++.+.+.       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            469999999999999999999999999999997542     222222234678999999999999877776       78


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----CCChhHHH
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----IGSPAYTV  153 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----~~~~~Y~~  153 (302)
                      +.++++++....                 ..|..+...++.++..    ....++++.||.+.....     .+...|..
T Consensus        77 ~~~~~~~~~~~~-----------------~~~~~~~~~~l~~a~~----~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~  135 (312)
T d1qyda_          77 DVVISALAGGVL-----------------SHHILEQLKLVEAIKE----AGNIKRFLPSEFGMDPDIMEHALQPGSITFI  135 (312)
T ss_dssp             SEEEECCCCSSS-----------------STTTTTHHHHHHHHHH----SCCCSEEECSCCSSCTTSCCCCCSSTTHHHH
T ss_pred             chhhhhhhhccc-----------------ccchhhhhHHHHHHHH----hcCCcEEEEeeccccCCCcccccchhhhhhH
Confidence            899998874321                 1234445555555555    334566777765443222     12334555


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhcc-----ccCCCCCCHHHHHHHHHHhcc
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMG-----NLRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~l~s  228 (302)
                      +|...+    .+..+   .+++.+.++|+.++++....................     .....+++++|+|++++.++.
T Consensus       136 ~~~~~~----~~~~~---~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~  208 (312)
T d1qyda_         136 DKRKVR----RAIEA---ASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSID  208 (312)
T ss_dssp             HHHHHH----HHHHH---TTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTT
T ss_pred             HHHHHH----Hhhcc---cccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhc
Confidence            554443    33333   578899999999987643322100000000000000     011347899999999998886


Q ss_pred             CCCCCccccE-EeeCCCcc
Q 044670          229 DEASDVTGLN-LVVDGGFS  246 (302)
Q Consensus       229 ~~~~~~~G~~-~~~~gG~~  246 (302)
                      .+.  ..|+. +++.++..
T Consensus       209 ~~~--~~~~~~~~~~~~~~  225 (312)
T d1qyda_         209 DPQ--TLNKTMYIRPPMNI  225 (312)
T ss_dssp             CGG--GSSSEEECCCGGGE
T ss_pred             Ccc--ccCceEEEeCCCcC
Confidence            533  23444 44555544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.53  E-value=3e-14  Score=121.93  Aligned_cols=210  Identities=13%  Similarity=0.114  Sum_probs=129.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH------HHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG------QALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~------~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      +-|+||||||||+||++++++|+++|++|++++|+....      ..+.......+.++.+|+.+..+..+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            357899999999999999999999999999999875432      12222224568899999999998777776      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHH
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSK  155 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  155 (302)
                       ..+.++|+++...                     ..+...+..++...    +..++++.||............+...+
T Consensus        76 -~~~~vi~~~~~~~---------------------~~~~~~~~~a~~~~----~~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          76 -NVDVVISTVGSLQ---------------------IESQVNIIKAIKEV----GTVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             -TCSEEEECCCGGG---------------------SGGGHHHHHHHHHH----CCCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             -hceeeeecccccc---------------------cchhhHHHHHHHHh----ccccceeeecccccccccccccccccc
Confidence             7899999887432                     22333444444443    345677777765544433333444444


Q ss_pred             HHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhc-----cccCCCCCCHHHHHHHHHHhccCC
Q 044670          156 YGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEM-----GNLRGQVLNAEGIANAALYLATDE  230 (302)
Q Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~~~~l~s~~  230 (302)
                      ............+   .+++.+.++|+.++++.............. ....     ......+++++|+|++++.++..+
T Consensus       130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~  205 (307)
T d1qyca_         130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPP-RDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP  205 (307)
T ss_dssp             HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCC-SSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG
T ss_pred             ccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhh-cccceeeecccccccCCcHHHHHHHHHHHhcCh
Confidence            4333334433333   478889999999998754332110000000 0000     001134789999999999988654


Q ss_pred             CCCccccEEeeCCCcccC
Q 044670          231 ASDVTGLNLVVDGGFSVA  248 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~~~~  248 (302)
                      .. ..+.++++.++..++
T Consensus       206 ~~-~~~~~~~~~~~~~~s  222 (307)
T d1qyca_         206 RT-LNKTLYLRLPANTLS  222 (307)
T ss_dssp             GG-TTEEEECCCGGGEEE
T ss_pred             hh-cCceeEEeCCCCccC
Confidence            32 233444455555543

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.52  E-value=4.5e-14  Score=120.81  Aligned_cols=202  Identities=12%  Similarity=0.034  Sum_probs=123.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +||||||||+||+++++.|.++|+.|.+ +++...              +.+|++|.+.++++++..     ++|+|||+
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~--------------~~~Dl~~~~~~~~~i~~~-----~~D~Vih~   61 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE--------------FCGDFSNPKGVAETVRKL-----RPDVIVNA   61 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS--------------SCCCTTCHHHHHHHHHHH-----CCSEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc--------------ccCcCCCHHHHHHHHHHc-----CCCEEEEe
Confidence            6999999999999999999999975544 443321              346999999988888765     78999999


Q ss_pred             ccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCChhHHH
Q 044670           85 AGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSPAYTV  153 (302)
Q Consensus        85 Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~~Y~~  153 (302)
                      ||....   .   ...+..+..+.+|+.++.++..++..     ...+++++||.......           .+...|+.
T Consensus        62 Aa~~~~---~---~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~  130 (298)
T d1n2sa_          62 AAHTAV---D---KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (298)
T ss_dssp             CCCCCH---H---HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             cccccc---c---ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCchHhh
Confidence            996532   1   11234467889999999988887754     24567777776544321           13468999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCCHHHHHHHHHhccc-----cCCCCCCHHHHHHHHHHhcc
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSINPAILEAFLSEMGN-----LRGQVLNAEGIANAALYLAT  228 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~dva~~~~~l~s  228 (302)
                      +|.+.+.+.+...    ..  .+....+....++....   ..............     ....+....|+++++..++.
T Consensus       131 ~k~~~e~~~~~~~----~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~  201 (298)
T d1n2sa_         131 TKLAGEKALQDNC----PK--HLIFRTSWVYAGKGNNF---AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIR  201 (298)
T ss_dssp             HHHHHHHHHHHHC----SS--EEEEEECSEECSSSCCH---HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHH
T ss_pred             hhhhhhhhHHhhh----cc--cccccccceeeccCCcc---chhhhhhhcccceeecccceeecccccchHHHHHHHHHh
Confidence            9988876654432    21  22222222222222111   11122222221111     11335678888888876653


Q ss_pred             C-CCCCccccEEeeCCCcc
Q 044670          229 D-EASDVTGLNLVVDGGFS  246 (302)
Q Consensus       229 ~-~~~~~~G~~~~~~gG~~  246 (302)
                      . ......++++++.++-.
T Consensus       202 ~~~~~~~~~~~~n~~~~~~  220 (298)
T d1n2sa_         202 VALNKPEVAGLYHLVAGGT  220 (298)
T ss_dssp             HHHHCGGGCEEEECCCBSC
T ss_pred             hhhccccccccccccCCCc
Confidence            1 11112466777766544

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.51  E-value=6.1e-14  Score=120.38  Aligned_cols=212  Identities=14%  Similarity=0.144  Sum_probs=132.4

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccH--HHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH--HcCCccE
Q 044670            6 AIITGGASGIGAAAAKLFHENGA-KVVIADVQDNL--GQALACKLGEDVCYIHCDVTSEDEITNLVDTAVA--KYGKLDI   80 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~--~~~~id~   80 (302)
                      ||||||||+||++++++|+++|+ .|+++++-...  .....   ..    ..+|..+.+.   ..+....  .+..+++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~---~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~   71 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DL----NIADYMDKED---FLIQIMAGEEFGDVEA   71 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH---TS----CCSEEEEHHH---HHHHHHTTCCCSSCCE
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc---cc----chhhhccchH---HHHHHhhhhcccchhh
Confidence            89999999999999999999996 57777533221  11111   11    1123333333   2333332  2346889


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC-----------CCCh
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG-----------IGSP  149 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~-----------~~~~  149 (302)
                      ++|.|+....     ...   ..+.....|+.++..++.++...-    .+ +++.||.....+.           .+..
T Consensus        72 i~~~aa~~~~-----~~~---~~~~~~~~~~~~~~~~l~~~~~~~----i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~  138 (307)
T d1eq2a_          72 IFHEGACSST-----TEW---DGKYMMDNNYQYSKELLHYCLERE----IP-FLYASSAATYGGRTSDFIESREYEKPLN  138 (307)
T ss_dssp             EEECCSCCCT-----TCC---CHHHHHHHTHHHHHHHHHHHHHHT----CC-EEEEEEGGGGTTCCSCBCSSGGGCCCSS
T ss_pred             hhhhcccccc-----ccc---cccccccccccccccccccccccc----cc-cccccccccccccccccccccccccccc
Confidence            9999875432     112   335677888888888888777742    33 5555544433321           2456


Q ss_pred             hHHHHHHHHHHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC----HHHHHHHHHhcc--------ccCCCCCCHH
Q 044670          150 AYTVSKYGIIALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN----PAILEAFLSEMG--------NLRGQVLNAE  217 (302)
Q Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~----~~~~~~~~~~~~--------~~~~~~~~~~  217 (302)
                      .|+.+|.+.+.+++.+..+   .++++..++|..+++|........    ..+.........        ...+.+.+++
T Consensus       139 ~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~  215 (307)
T d1eq2a_         139 VYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG  215 (307)
T ss_dssp             HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHH
T ss_pred             ccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecc
Confidence            8999999999999888755   689999999999999866433211    122222221111        1114578999


Q ss_pred             HHHHHHHHhccCCCCCccccEEeeCCCccc
Q 044670          218 GIANAALYLATDEASDVTGLNLVVDGGFSV  247 (302)
Q Consensus       218 dva~~~~~l~s~~~~~~~G~~~~~~gG~~~  247 (302)
                      |++.++..++....    ...+++..|...
T Consensus       216 d~~~~~~~~~~~~~----~~~~~~~~~~~~  241 (307)
T d1eq2a_         216 DVADVNLWFLENGV----SGIFNLGTGRAE  241 (307)
T ss_dssp             HHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             cHHHHHHHHhhhcc----ccccccccccch
Confidence            99999988875432    346777776663

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.49  E-value=9.6e-14  Score=122.16  Aligned_cols=208  Identities=13%  Similarity=-0.004  Sum_probs=127.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHH-HHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE-ITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~~id~   80 (302)
                      +.|+|+||||||+||++++++|+++|++|+++.|+.+......-.....++++.+|+.|..+ ++.++.       ..|.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~-------~~~~   74 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFE-------GAHL   74 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhc-------CCce
Confidence            57999999999999999999999999999999998776543222223568999999998654 333333       6788


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccC--CCCChhHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIA--GIGSPAYTVSKYGI  158 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~--~~~~~~Y~~sK~a~  158 (302)
                      ++++......                  .|+..+.+++.++..    .+..++++.||......  ......|..+|...
T Consensus        75 ~~~~~~~~~~------------------~~~~~~~~~~~aa~~----agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          75 AFINTTSQAG------------------DEIAIGKDLADAAKR----AGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             EEECCCSTTS------------------CHHHHHHHHHHHHHH----HSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             EEeecccccc------------------hhhhhhhHHHHHHHH----hCCCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            8876543211                  122333455555554    34556777777554332  23345677888666


Q ss_pred             HHHHHHHHHHHCCCCcEEEEEeCCcccCCcccCCCCC--HHHHHHHHHhccccC-C----CCCC-HHHHHHHHHHhccCC
Q 044670          159 IALVKILAAELRQYGLRVNCVSPYGLVSGISSRNSIN--PAILEAFLSEMGNLR-G----QVLN-AEGIANAALYLATDE  230 (302)
Q Consensus       159 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~-~----~~~~-~~dva~~~~~l~s~~  230 (302)
                      +.+.++       .+++...++|+.+...........  .............+. +    .+++ .+|+++++..++.+.
T Consensus       133 ~~~~~~-------~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~  205 (350)
T d1xgka_         133 ENYVRQ-------LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDG  205 (350)
T ss_dssp             HHHHHT-------SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHC
T ss_pred             HHHHHh-------hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCC
Confidence            554332       367888999988776543222110  000000000000000 1    1234 478999998888654


Q ss_pred             CCCccccEEeeCCCc
Q 044670          231 ASDVTGLNLVVDGGF  245 (302)
Q Consensus       231 ~~~~~G~~~~~~gG~  245 (302)
                      .....|+++.+.|..
T Consensus       206 ~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         206 PQKWNGHRIALTFET  220 (350)
T ss_dssp             HHHHTTCEEEECSEE
T ss_pred             hhhcCCeEEEEeCCc
Confidence            444579999887753

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.84  E-value=8.6e-14  Score=112.07  Aligned_cols=43  Identities=19%  Similarity=0.336  Sum_probs=39.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL   47 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (302)
                      ++.|+||+|+||+++|+.|+++|++|++.+|++++++++.+++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            5788899999999999999999999999999999888776665

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.19  E-value=3.8e-06  Score=65.10  Aligned_cols=75  Identities=17%  Similarity=0.223  Sum_probs=59.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++|+|+|.|| |.+|+.+|+.|+++|++|++.+|+.++++.+.+.++ .......+..+.....+.+.       ..|.+
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~-~~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ-HSTPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT-TEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc-ccccccccccchhhhHhhhh-------cccee
Confidence            4799999987 999999999999999999999999999998887664 34445566667666655554       56777


Q ss_pred             EEcc
Q 044670           82 YNNA   85 (302)
Q Consensus        82 v~~A   85 (302)
                      +...
T Consensus        72 i~~~   75 (182)
T d1e5qa1          72 ISLI   75 (182)
T ss_dssp             EECS
T ss_pred             Eeec
Confidence            7544

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.07  E-value=1.8e-05  Score=60.29  Aligned_cols=72  Identities=22%  Similarity=0.413  Sum_probs=57.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      +++++++|.|+ |.+|..+++.|...|+ ++.++.|+.++++.+...++..  +.  ++   +++.+.+.       ..|
T Consensus        22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~--~~--~~---~~~~~~l~-------~~D   86 (159)
T d1gpja2          22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE--AV--RF---DELVDHLA-------RSD   86 (159)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE--EC--CG---GGHHHHHH-------TCS
T ss_pred             cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc--cc--cc---hhHHHHhc-------cCC
Confidence            57899999998 9999999999999998 5899999999999888887642  22  22   23333344       789


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|++.+.
T Consensus        87 ivi~atss   94 (159)
T d1gpja2          87 VVVSATAA   94 (159)
T ss_dssp             EEEECCSS
T ss_pred             EEEEecCC
Confidence            99999884

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.02  E-value=5.6e-06  Score=64.70  Aligned_cols=79  Identities=20%  Similarity=0.357  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|||+||+|++|...+......|++|+.+.+++++.+.+ +..+....+   |-.+++..+.+.+...  ...+|++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~Ga~~vi---~~~~~~~~~~~~~~~~--~~Gvd~v  102 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAF---NYKTVNSLEEALKKAS--PDGYDCY  102 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEE---ETTSCSCHHHHHHHHC--TTCEEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH-Hhhhhhhhc---ccccccHHHHHHHHhh--cCCCcee
Confidence            589999999999999999999889999999999987766554 444433222   3344433333333221  1369999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       103 ~D~vG  107 (182)
T d1v3va2         103 FDNVG  107 (182)
T ss_dssp             EESSC
T ss_pred             EEecC
Confidence            99887

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.01  E-value=5.6e-05  Score=57.97  Aligned_cols=81  Identities=20%  Similarity=0.278  Sum_probs=57.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-CccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-KLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~id~   80 (302)
                      .|.+++|+| +|+||...+..+...|++|+++++++++.+... .++....+ ..|- ..++.....+.+.+..| .+|+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~-~~~~-~~~~~~~~~~~~~~~~g~g~D~  101 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTL-VVDP-AKEEESSIIERIRSAIGDLPNV  101 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEE-ECCT-TTSCHHHHHHHHHHHSSSCCSE
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEE-eccc-cccccchhhhhhhcccccCCce
Confidence            478999997 689999999988899999999999988876554 44443332 2232 22233444566665554 6899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      +|.++|
T Consensus       102 vid~~g  107 (170)
T d1e3ja2         102 TIDCSG  107 (170)
T ss_dssp             EEECSC
T ss_pred             eeecCC
Confidence            999998

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.97  E-value=5e-06  Score=64.66  Aligned_cols=106  Identities=14%  Similarity=0.157  Sum_probs=67.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|||+||+||+|...+......|++|+.+.+++++.+... .++... .+  |=.+ . ..+....+  .-+++|++
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~-vi--~~~~-~-~~~~~~~~--~~~gvD~v  102 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKE-VL--ARED-V-MAERIRPL--DKQRWAAA  102 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSE-EE--ECC-----------C--CSCCEEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccce-ee--ecch-h-HHHHHHHh--hccCcCEE
Confidence            3788999999999999888888889999999999888766554 455443 22  3221 1 11111111  12379999


Q ss_pred             EEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCC
Q 044670           82 YNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAG  145 (302)
Q Consensus        82 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~  145 (302)
                      +.+.|...             +               ...+..++  ..||+|.++...+....
T Consensus       103 id~vgg~~-------------~---------------~~~l~~l~--~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         103 VDPVGGRT-------------L---------------ATVLSRMR--YGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EECSTTTT-------------H---------------HHHHHTEE--EEEEEEECSCCSSSCCC
T ss_pred             EEcCCchh-------------H---------------HHHHHHhC--CCceEEEeecccCcccC
Confidence            99988311             1               22344553  36899999987665543

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=1.4e-05  Score=61.86  Aligned_cols=77  Identities=16%  Similarity=0.247  Sum_probs=55.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|++|||+||+|++|...+......|++|+++++++++.+. ..+++... +  .|-++++-    .+++.+..  ..+|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~-~~~~Ga~~-v--i~~~~~~~----~~~i~~~t~~~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI-VLQNGAHE-V--FNHREVNY----IDKIKKYVGEKGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTTCSE-E--EETTSTTH----HHHHHHHHCTTCEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccccc-ccccCccc-c--cccccccH----HHHhhhhhccCCce
Confidence            58899999999999999999888999999999987766544 44555432 2  36666543    33333332  2589


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9999877

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=7.2e-05  Score=58.21  Aligned_cols=80  Identities=15%  Similarity=0.264  Sum_probs=60.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHH---HHhC--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALA---CKLG--EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~---~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +++|+|+|.|+ ||.|++++..|++.|. +++++.|+.+..+.+.   +.++  ........|+.+.+++.....     
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   89 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----   89 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence            47899999998 7999999999999997 5888899877655433   2221  234455779999888766655     


Q ss_pred             cCCccEEEEcccCC
Q 044670           75 YGKLDIMYNNAGIV   88 (302)
Q Consensus        75 ~~~id~lv~~Ag~~   88 (302)
                        ..|++||+....
T Consensus        90 --~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 --SADILTNGTKVG  101 (182)
T ss_dssp             --TCSEEEECSSTT
T ss_pred             --ccceeccccCCc
Confidence              789999998653

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.88  E-value=2.4e-05  Score=57.57  Aligned_cols=72  Identities=21%  Similarity=0.327  Sum_probs=58.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      +|+|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+.+  ...++.+|.+|++.++++-      ....|.++..
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~--~~~vi~Gd~~~~~~l~~~~------i~~a~~vv~~   72 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI--DALVINGDCTKIKTLEDAG------IEDADMYIAV   72 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC--SSEEEESCTTSHHHHHHTT------TTTCSEEEEC
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh--hhhhccCcccchhhhhhcC------hhhhhhhccc
Confidence            6899998 99999999999999999999999999888876654  4578889999999755541      1256777774


Q ss_pred             c
Q 044670           85 A   85 (302)
Q Consensus        85 A   85 (302)
                      .
T Consensus        73 t   73 (132)
T d1lssa_          73 T   73 (132)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=2.4e-05  Score=60.71  Aligned_cols=77  Identities=21%  Similarity=0.240  Sum_probs=57.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|++|+|+||+|++|...+......|++|+++++++++.+.+. .++.. ++  .|-++++-    .+++.+..  ..+|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~-~v--i~~~~~d~----~~~v~~~t~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAW-QV--INYREEDL----VERLKEITGGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCS-EE--EETTTSCH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCe-EE--EECCCCCH----HHHHHHHhCCCCeE
Confidence            4789999999999999999998899999999999988876654 45543 22  36666543    33333332  2589


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9999887

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.82  E-value=9.6e-05  Score=57.79  Aligned_cols=83  Identities=19%  Similarity=0.189  Sum_probs=52.9

Q ss_pred             CCEEEE-eCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH---HHHhCCCeEEEEecCCCHHHHHHHHHHHHH-HcCC
Q 044670            3 GKVAII-TGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL---ACKLGEDVCYIHCDVTSEDEITNLVDTAVA-KYGK   77 (302)
Q Consensus         3 gk~vlV-TGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~-~~~~   77 (302)
                      |++++| +||+|++|...+......|++|+.+.|+.+..++.   .++++... ++.-|-.+...+.+.+.++.+ ..++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~-vi~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQ-VITEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSE-EEEHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccE-EEeccccchhHHHHHHHHHHhhccCC
Confidence            555555 79999999999888888999999998877655443   34455433 332221122223333444433 3457


Q ss_pred             ccEEEEccc
Q 044670           78 LDIMYNNAG   86 (302)
Q Consensus        78 id~lv~~Ag   86 (302)
                      +|+++.+.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999877

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.78  E-value=2.2e-05  Score=61.08  Aligned_cols=77  Identities=22%  Similarity=0.301  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id   79 (302)
                      .|++|||+||+|++|...+..+...|++|+++.+++++.+. .++.+.. +.  .|-.+++-    .+++.+..  .++|
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~-l~~~Ga~-~v--i~~~~~~~----~~~v~~~t~~~g~d   96 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM-LSRLGVE-YV--GDSRSVDF----ADEILELTDGYGVD   96 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH-HHTTCCS-EE--EETTCSTH----HHHHHHHTTTCCEE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccccc-ccccccc-cc--ccCCccCH----HHHHHHHhCCCCEE
Confidence            47899999999999999999888999999999988776654 4455543 22  34455433    34444433  2599


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      +++.+.|
T Consensus        97 ~v~d~~g  103 (183)
T d1pqwa_          97 VVLNSLA  103 (183)
T ss_dssp             EEEECCC
T ss_pred             EEEeccc
Confidence            9999887

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=2.9e-05  Score=51.33  Aligned_cols=43  Identities=26%  Similarity=0.468  Sum_probs=37.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      ++.++||+||+||+|...+..+...|++|+.+.+++++.+-+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            4678999999999999999888889999999999888776553

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=0.0005  Score=52.51  Aligned_cols=79  Identities=22%  Similarity=0.350  Sum_probs=56.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC-Ccc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG-KLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~-~id   79 (302)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. ++++... ++..+-.+....   .+.+...++ .+|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~~-~~~~~~~~~~~~---~~~~~~~~g~g~D   99 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADL-VLQISKESPQEI---ARKVEGQLGCKPE   99 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSE-EEECSSCCHHHH---HHHHHHHHTSCCS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCcc-cccccccccccc---cccccccCCCCce
Confidence            4789999987 9999999999999998 799999988877654 4565433 333333444443   444444443 689


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.+.|
T Consensus       100 vvid~~G  106 (171)
T d1pl8a2         100 VTIECTG  106 (171)
T ss_dssp             EEEECSC
T ss_pred             EEEeccC
Confidence            9999998

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=5.5e-05  Score=58.21  Aligned_cols=75  Identities=12%  Similarity=0.095  Sum_probs=55.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||+|+|.|+ ||.+++++..|.+.|.++.++.|+.++.+.+.+.+.........+..+.+            ....|+
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~~------------~~~~dl   82 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELE------------GHEFDL   82 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGT------------TCCCSE
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccccc------------ccccce
Confidence            47899999997 89999999999999999999999999998888776422222222322211            126899


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      +||+....
T Consensus        83 iIN~Tp~G   90 (170)
T d1nyta1          83 IINATSSG   90 (170)
T ss_dssp             EEECCSCG
T ss_pred             eecccccC
Confidence            99987553

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.57  E-value=0.00011  Score=56.92  Aligned_cols=80  Identities=16%  Similarity=0.243  Sum_probs=55.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC--Cc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYG--KL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~--~i   78 (302)
                      .|.+|+|+|+ |+||...+..+...|+ +|+++++++++.+.. ++++... ++  |..+. +..+..+++.+..+  .+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~-vi--~~~~~-~~~~~~~~i~~~~~~~g~  101 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADL-TL--NRRET-SVEERRKAIMDITHGRGA  101 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSE-EE--ETTTS-CHHHHHHHHHHHTTTSCE
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccceE-EE--ecccc-chHHHHHHHHHhhCCCCc
Confidence            4789999997 8999999999999998 799999988877644 5565432 22  33332 22223344444332  48


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|.+.|.
T Consensus       102 Dvvid~vG~  110 (182)
T d1vj0a2         102 DFILEATGD  110 (182)
T ss_dssp             EEEEECSSC
T ss_pred             eEEeecCCc
Confidence            999999883

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.55  E-value=0.00055  Score=50.94  Aligned_cols=110  Identities=16%  Similarity=0.158  Sum_probs=64.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +.+++.|.|+ |.+|..++..|+.+|  .++++.++++++.+.....+      .........|.   ++    +     
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~~----~-----   70 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---SD----C-----   70 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---GG----G-----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---HH----h-----
Confidence            4678999996 999999999999988  58999999887655433222      23334444443   21    1     


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                        ...|++|..||....        +.+.-.+.+..|..-...+.+.+.+    .....++.+.|
T Consensus        71 --~~adivvitag~~~~--------~g~~r~~l~~~N~~i~~~~~~~i~~----~~p~aivivvt  121 (146)
T d1ez4a1          71 --KDADLVVITAGAPQK--------PGESRLDLVNKNLNILSSIVKPVVD----SGFDGIFLVAA  121 (146)
T ss_dssp             --TTCSEEEECCCC------------------CHHHHHHHHHHHHHHHHH----TTCCSEEEECS
T ss_pred             --ccccEEEEecccccC--------CCCCHHHHHHHHHHHHHHHHHHHhh----cCCCcEEEEeC
Confidence              167999999996431        1223345666675444444444444    33333444444

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.53  E-value=0.00013  Score=56.13  Aligned_cols=74  Identities=20%  Similarity=0.326  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|+|+||+|++|...+......|++|+.+++++++.+.+ ++++....   .|..+.      .+++. ...++|++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~---i~~~~~------~~~~~-~~~g~D~v   95 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEA---ATYAEV------PERAK-AWGGLDLV   95 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEE---EEGGGH------HHHHH-HTTSEEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-ccccccee---eehhhh------hhhhh-cccccccc
Confidence            588999999999999999988888999999999887766554 34554322   243321      12222 23469999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus        96 ~d~~G  100 (171)
T d1iz0a2          96 LEVRG  100 (171)
T ss_dssp             EECSC
T ss_pred             ccccc
Confidence            99766

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.52  E-value=6.6e-05  Score=55.17  Aligned_cols=72  Identities=21%  Similarity=0.321  Sum_probs=55.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHH-HHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNL-VDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~-~~~~~~~~~~id~lv   82 (302)
                      |+++|.|+ |-+|+++++.|.++|+.|++++.+++..+.+.+   .....+.+|.++++.++++ ++       ..|.+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~---~~~~~~~gd~~~~~~l~~a~i~-------~a~~vi   69 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS---YATHAVIANATEENELLSLGIR-------NFEYVI   69 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT---TCSEEEECCTTCTTHHHHHTGG-------GCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH---hCCcceeeecccchhhhccCCc-------cccEEE
Confidence            56778876 889999999999999999999999988877643   2346677999999876554 22       568777


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      -..+
T Consensus        70 ~~~~   73 (134)
T d2hmva1          70 VAIG   73 (134)
T ss_dssp             ECCC
T ss_pred             EEcC
Confidence            7554

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00028  Score=56.56  Aligned_cols=78  Identities=24%  Similarity=0.235  Sum_probs=54.7

Q ss_pred             CCCCEEEEeCC----------------CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH
Q 044670            1 LEGKVAIITGG----------------ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI   64 (302)
Q Consensus         1 l~gk~vlVTGa----------------s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v   64 (302)
                      |+|++||||+|                ||-.|.++|+++..+|++|+++.-....      ..+..+..+  ...+.++.
T Consensus         4 l~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~------~~p~~~~~~--~~~t~~~m   75 (223)
T d1u7za_           4 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL------PTPPFVKRV--DVMTALEM   75 (223)
T ss_dssp             TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC------CCCTTEEEE--ECCSHHHH
T ss_pred             cCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc------Ccccccccc--eehhhHHH
Confidence            68999999976                6889999999999999999987543321      112334444  34455544


Q ss_pred             HHHHHHHHHHcCCccEEEEcccCCC
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                         .+.+.+.....|++|++|++..
T Consensus        76 ---~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          76 ---EAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             ---HHHHHHHGGGCSEEEECCBCCS
T ss_pred             ---HHHHHhhhccceeEeeeechhh
Confidence               4444444557899999999865

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.42  E-value=0.00063  Score=50.49  Aligned_cols=114  Identities=15%  Similarity=0.187  Sum_probs=67.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ++.|+||+|.+|.+++..|+.+|.  ++++.+.++.+.+.+.-.....+.....-+ ...+..+.++       .-|++|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~-~~~~~~~~~~-------~aDivV   73 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYL-GPEQLPDCLK-------GCDVVV   73 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEE-SGGGHHHHHT-------TCSEEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEE-cCCChHHHhC-------CCCEEE
Confidence            588999999999999999999884  588888876554433211111111111111 2222222233       689999


Q ss_pred             EcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           83 NNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        83 ~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ..||....   +  ..+   -.+.++.|..-.-.+.+.+.++   ...+.++++|
T Consensus        74 itag~~~~---~--g~s---R~~ll~~N~~i~~~i~~~i~~~---~p~~iiivvt  117 (144)
T d1mlda1          74 IPAGVPRK---P--GMT---RDDLFNTNATIVATLTAACAQH---CPDAMICIIS  117 (144)
T ss_dssp             ECCSCCCC---T--TCC---GGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             ECCCcCCC---C--CCC---cchHHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            99996432   1  122   2356777766666666666554   2345555555

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.41  E-value=0.00013  Score=56.98  Aligned_cols=78  Identities=21%  Similarity=0.346  Sum_probs=52.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEE-EecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      +++|||+||+||+|...++.....|+++++ +++++++...+...++...   ..|..+++. .+.+.++..  ..+|++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~---vi~~~~~~~-~~~~~~~~~--~GvDvv  104 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA---AVNYKTGNV-AEQLREACP--GGVDVY  104 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE---EEETTSSCH-HHHHHHHCT--TCEEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE---EeeccchhH-HHHHHHHhc--cCceEE
Confidence            489999999999999888877779987554 5666666666766666442   225554432 223333322  269999


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      +.+.|
T Consensus       105 ~D~vG  109 (187)
T d1vj1a2         105 FDNVG  109 (187)
T ss_dssp             EESSC
T ss_pred             EecCC
Confidence            99887

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.35  E-value=0.00058  Score=52.30  Aligned_cols=73  Identities=14%  Similarity=0.175  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGE--DVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||+++|.|+ ||.+++++..|.+.+.+|+++.|+.++++.+.+.++.  .+.....|-.+              ....
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~~~   80 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQTY   80 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CSCC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------cccc
Confidence            47899999977 8889999999999889999999999999988887753  34444433211              1368


Q ss_pred             cEEEEcccCC
Q 044670           79 DIMYNNAGIV   88 (302)
Q Consensus        79 d~lv~~Ag~~   88 (302)
                      |++||+....
T Consensus        81 diiIN~tp~g   90 (171)
T d1p77a1          81 DLVINATSAG   90 (171)
T ss_dssp             SEEEECCCC-
T ss_pred             ceeeeccccc
Confidence            9999998754

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.26  E-value=0.00047  Score=52.56  Aligned_cols=78  Identities=17%  Similarity=0.276  Sum_probs=54.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|.+++|+|++|++|..++..+...|+ +|+++++++++.+.. ++++.. ..+  |.++.+-    .+++.+..  +.+
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-~~~Ga~-~~i--~~~~~~~----~~~~~~~~~~~~~   98 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGAD-YVI--NASMQDP----LAEIRRITESKGV   98 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCS-EEE--ETTTSCH----HHHHHHHTTTSCE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH-HHcCCc-eee--ccCCcCH----HHHHHHHhhcccc
Confidence            477999999999999999999998995 788888887766554 445543 222  4444433    33333332  258


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |+++.++|.
T Consensus        99 d~vid~~g~  107 (170)
T d1jvba2          99 DAVIDLNNS  107 (170)
T ss_dssp             EEEEESCCC
T ss_pred             hhhhccccc
Confidence            999999883

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.23  E-value=0.0015  Score=48.65  Aligned_cols=110  Identities=16%  Similarity=0.172  Sum_probs=66.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      .+++|.|+|| |.+|.+++..|+.+|.  ++++.++++++.+.....+       .....+...|.   ++    ++   
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~~----l~---   73 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---DD----CR---   73 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---GG----TT---
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---HH----hc---
Confidence            4678999997 9999999999999884  6999999887755433332       22333433332   21    22   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                          .-|++|.+||....   +  ..+   -.+.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        74 ----daDvvvitag~~~~---~--~~~---R~dl~~~N~~i~~~i~~~i~~~---~p~a~~ivvt  123 (148)
T d1ldna1          74 ----DADLVVICAGANQK---P--GET---RLDLVDKNIAIFRSIVESVMAS---GFQGLFLVAT  123 (148)
T ss_dssp             ----TCSEEEECCSCCCC---T--TTC---SGGGHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             ----cceeEEEecccccc---c--Ccc---hhHHHHHHHHHHHHHHHHHHhh---CCCceEEEec
Confidence                57999999996542   1  112   1334455544444444454443   2345555554

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.20  E-value=0.00019  Score=54.90  Aligned_cols=74  Identities=19%  Similarity=0.361  Sum_probs=50.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~id~   80 (302)
                      +.+|||+||+||+|...+......|++|+.+.+++++.+.+. .++.... +  |   .+   +...+..+..  +++|+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~v-i--~---~~---~~~~~~~~~~~~~gvd~   93 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEV-I--S---RE---DVYDGTLKALSKQQWQG   93 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEE-E--E---HH---HHCSSCCCSSCCCCEEE
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccce-E--e---cc---chhchhhhcccCCCceE
Confidence            568999999999999888887789999999999988876654 4444322 2  2   11   1111111111  36899


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      ++.+.|
T Consensus        94 vid~vg   99 (167)
T d1tt7a2          94 AVDPVG   99 (167)
T ss_dssp             EEESCC
T ss_pred             EEecCc
Confidence            999887

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00097  Score=50.67  Aligned_cols=74  Identities=27%  Similarity=0.366  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++|+|.|+ |+||...+..+...|++++++++++++.+ ..++++... +  .|..+.+.....       ..++|++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGad~-~--i~~~~~~~~~~~-------~~~~D~v   97 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADE-V--VNSRNADEMAAH-------LKSFDFI   97 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSE-E--EETTCHHHHHTT-------TTCEEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCCcE-E--EECchhhHHHHh-------cCCCcee
Confidence            4789999986 99999988888889999999998888764 445665432 2  355665542221       2379999


Q ss_pred             EEcccC
Q 044670           82 YNNAGI   87 (302)
Q Consensus        82 v~~Ag~   87 (302)
                      |.+.|.
T Consensus        98 id~~g~  103 (168)
T d1uufa2          98 LNTVAA  103 (168)
T ss_dssp             EECCSS
T ss_pred             eeeeec
Confidence            999884

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.17  E-value=0.0008  Score=50.24  Aligned_cols=80  Identities=14%  Similarity=0.119  Sum_probs=55.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      -|+|.|.||.|-+|..+++.|.++||+|.+.+|+.......... .....+   ......++...+.++.....+=.+++
T Consensus         9 ~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~-~~~~v~---~~~~~~~~~~v~~~~~~~~~~~~iii   84 (152)
T d2pv7a2           9 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA-NADVVI---VSVPINLTLETIERLKPYLTENMLLA   84 (152)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT-TCSEEE---ECSCGGGHHHHHHHHGGGCCTTSEEE
T ss_pred             CCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh-hccccc---cccchhhheeeeecccccccCCceEE
Confidence            36899999999999999999999999999999987665443322 223333   23445566666777665544334566


Q ss_pred             Eccc
Q 044670           83 NNAG   86 (302)
Q Consensus        83 ~~Ag   86 (302)
                      ..+.
T Consensus        85 D~~S   88 (152)
T d2pv7a2          85 DLTS   88 (152)
T ss_dssp             ECCS
T ss_pred             Eecc
Confidence            6554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.11  E-value=0.00088  Score=51.27  Aligned_cols=77  Identities=19%  Similarity=0.284  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEE-EecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY-GKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id   79 (302)
                      .|.+|+|.|+ |+||...+..+...|+++++ +++++++.+. .++++.. +++  |..+++.    .+++.+.. +.+|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~-~~i--~~~~~~~----~~~i~~~t~gg~D   98 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGAT-HVI--NSKTQDP----VAAIKEITDGGVN   98 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCS-EEE--ETTTSCH----HHHHHHHTTSCEE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCe-EEE--eCCCcCH----HHHHHHHcCCCCc
Confidence            4789999997 89999999888889987655 5666655544 4556532 333  4555333    33333322 4799


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|.+.|.
T Consensus        99 ~vid~~G~  106 (174)
T d1f8fa2          99 FALESTGS  106 (174)
T ss_dssp             EEEECSCC
T ss_pred             EEEEcCCc
Confidence            99999983

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.10  E-value=0.00036  Score=53.83  Aligned_cols=45  Identities=29%  Similarity=0.496  Sum_probs=37.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      +.++||+||+||+|...++.....|++|+.+++++++.+.+ +.++
T Consensus        32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lG   76 (177)
T d1o89a2          32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLG   76 (177)
T ss_dssp             GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHT
T ss_pred             CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhc
Confidence            45899999999999988888888999999999998887655 4454

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.09  E-value=0.0027  Score=47.06  Aligned_cols=112  Identities=17%  Similarity=0.130  Sum_probs=63.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++.|+|+ |.+|..++..|+.+|  .++++.++++++++.....+       +........|   .++    +.     
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~----l~-----   68 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA----LA-----   68 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG----GT-----
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH----hc-----
Confidence            67889995 999999999999988  47999999887655433222       2223333333   222    22     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                        .-|++|.+||....    ..+.+.++-.+.+..|.    .+++.+.+.+.+.....++.+-|
T Consensus        69 --~adiVVitaG~~~~----~~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          69 --DADVVISTLGNIKL----QQDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             --TCSEEEECCSCGGG----TC-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             --cccEEEEecccccc----ccccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence              57999999996431    11111112233455554    44555555554443333444443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.09  E-value=0.0037  Score=46.20  Aligned_cols=101  Identities=16%  Similarity=0.144  Sum_probs=60.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccH--HHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNL--GQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~--~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++.|+||+|.+|.+++..|+.+|  .++++.+++++.  .+.....+       ....+....--.+.+.    ++    
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~----l~----   73 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRI----ID----   73 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGG----GT----
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHH----hc----
Confidence            58999999999999999999998  489999987643  22222111       1222222111112221    22    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                         .-|++|.+||....     ...+   -.+.++.|..=...+.+.+.++
T Consensus        74 ---~aDvVVitAG~~~~-----~g~s---R~dl~~~Na~iv~~i~~~i~~~  113 (145)
T d1hyea1          74 ---ESDVVIITSGVPRK-----EGMS---RMDLAKTNAKIVGKYAKKIAEI  113 (145)
T ss_dssp             ---TCSEEEECCSCCCC-----TTCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---cceEEEEecccccC-----CCCC---hhhhhhhhHHHHHHHHHHHhcc
Confidence               57999999996432     2223   3456777766555555555554

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.08  E-value=0.0027  Score=44.70  Aligned_cols=38  Identities=24%  Similarity=0.427  Sum_probs=33.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++||+++|.|+ |.+|..-++.|++.|++|++.+.....
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~   47 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIP   47 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCH
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCCh
Confidence            57999999998 669999999999999999998765543

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.07  E-value=0.00074  Score=51.73  Aligned_cols=80  Identities=18%  Similarity=0.316  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|.+|+|.|+ ||+|...+..+...|+ +|+++++++++.+.. .+++....+...|-  .+.+.+..+....  +.+|+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~Ga~~~i~~~~~--~~~~~~~~~~~~~--~G~D~  101 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATECVNPQDY--KKPIQEVLTEMSN--GGVDF  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEECGGGC--SSCHHHHHHHHTT--SCBSE
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhCCeeEEecCCc--hhHHHHHHHHHhc--CCCCE
Confidence            4789999999 7899999999999985 788888888887654 44443322211221  2223333333322  37999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.+.|.
T Consensus       102 vid~~G~  108 (176)
T d2jhfa2         102 SFEVIGR  108 (176)
T ss_dssp             EEECSCC
T ss_pred             EEecCCc
Confidence            9999884

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.07  E-value=0.00036  Score=52.52  Aligned_cols=101  Identities=12%  Similarity=0.007  Sum_probs=56.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC---------EEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA---------KVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~---------~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      +|.|+||+|.+|.+++..|+..+.         +++...++.+..+.....+    ......+...-.+.+    .++  
T Consensus         6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--   79 (154)
T d1y7ta1           6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV----AFK--   79 (154)
T ss_dssp             EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH----HTT--
T ss_pred             EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh----hcc--
Confidence            799999999999999999998653         1122233334444333222    122333333222222    133  


Q ss_pred             HHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           72 VAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                           ..|++|.+||....     +..+.   .+.+..|+.-...+...+.++
T Consensus        80 -----~advViitaG~~~~-----pg~~r---~dl~~~N~~i~~~~~~~i~k~  119 (154)
T d1y7ta1          80 -----DADYALLVGAAPRK-----AGMER---RDLLQVNGKIFTEQGRALAEV  119 (154)
T ss_dssp             -----TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----cccEEEeecCcCCC-----CCCcH---HHHHHHHHHHHHHHHHHHHHh
Confidence                 68999999997432     23333   455666655544444444443

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.05  E-value=0.00044  Score=53.10  Aligned_cols=77  Identities=13%  Similarity=0.075  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc--CCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY--GKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~i   78 (302)
                      .|.+|+|.|+ |+||...+..+...|+ +|+++++++++.+.. ++++.. ++  .|..+++.    .+++.+..  ..+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~-~~--i~~~~~~~----~~~v~~~t~g~G~   97 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGAT-DI--LNYKNGHI----EDQVMKLTNGKGV   97 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCS-EE--ECGGGSCH----HHHHHHHTTTSCE
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCcc-cc--ccccchhH----HHHHHHHhhccCc
Confidence            4788999986 9999998888888997 688899887775544 456543 22  24444333    23333332  249


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|.++|.
T Consensus        98 D~vid~~g~  106 (174)
T d1jqba2          98 DRVIMAGGG  106 (174)
T ss_dssp             EEEEECSSC
T ss_pred             ceEEEccCC
Confidence            999999984

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.98  E-value=0.002  Score=48.63  Aligned_cols=76  Identities=22%  Similarity=0.279  Sum_probs=51.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.|+ |++|...+..+...|++|+++++++++.+.. ++++... +  .|.++.+..+    ++.+..+..+..
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga~~-~--i~~~~~~~~~----~~~~~~~g~~~~   97 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGASL-T--VNARQEDPVE----AIQRDIGGAHGV   97 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE-E--EETTTSCHHH----HHHHHHSSEEEE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh-hccCccc-c--ccccchhHHH----HHHHhhcCCccc
Confidence            4789999886 9999999998888999999999988877654 4555432 2  2555544433    333333445555


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |-+++
T Consensus        98 i~~~~  102 (166)
T d1llua2          98 LVTAV  102 (166)
T ss_dssp             EECCS
T ss_pred             ccccc
Confidence            55554

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.92  E-value=0.0023  Score=47.40  Aligned_cols=112  Identities=18%  Similarity=0.187  Sum_probs=64.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHc---CCEEEEEecCccHHHHHHHHh--CCCe-EEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            5 VAIITGGASGIGAAAAKLFHEN---GAKVVIADVQDNLGQALACKL--GEDV-CYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~---G~~V~~~~r~~~~~~~~~~~~--~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++.|+|++|.+|.+++..|+.+   +..+++.+..+.......+..  .... .....+-.+.++    ++       .-
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~~-------~a   70 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDATPA----LE-------GA   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCCHHH----HT-------TC
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCCccc----cC-------CC
Confidence            6889999999999999988753   468999988654322222211  1111 111122233332    32       57


Q ss_pred             cEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           79 DIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        79 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                      |++|.+||....   +  ..+   -.+.+..|..-...+.+.+.++   .+.+.++++|.
T Consensus        71 DvvvitaG~~~k---~--g~~---R~dl~~~N~~i~~~v~~~i~~~---~p~aivivvtN  119 (145)
T d2cmda1          71 DVVLISAGVRRK---P--GMD---RSDLFNVNAGIVKNLVQQVAKT---CPKACIGIITN  119 (145)
T ss_dssp             SEEEECCSCCCC---T--TCC---GGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECSS
T ss_pred             CEEEECCCccCC---C--Ccc---hhhHHHHHHHHHHHHHHHHHhh---CCCcEEEEccC
Confidence            999999997432   2  122   2455677765555555555554   23455555553

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.90  E-value=0.001  Score=50.82  Aligned_cols=78  Identities=22%  Similarity=0.285  Sum_probs=50.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCC-CHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVT-SEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+|+|.|+ ||+|...+..+...|+. |+++++++++. ++.++++... ++  |.. +.+.+.+.+....  .+.+|
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~-~i--~~~~~~~~~~~~~~~~~--~~g~D  100 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATE-CI--NPQDFSKPIQEVLIEMT--DGGVD  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSE-EE--CGGGCSSCHHHHHHHHT--TSCBS
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcE-EE--eCCchhhHHHHHHHHHc--CCCCc
Confidence            4789999998 69999999999999975 55566666665 4455666433 22  222 2233333333332  23699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|.+.|
T Consensus       101 ~vid~~G  107 (176)
T d2fzwa2         101 YSFECIG  107 (176)
T ss_dssp             EEEECSC
T ss_pred             EeeecCC
Confidence            9999988

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.90  E-value=0.0015  Score=49.62  Aligned_cols=68  Identities=28%  Similarity=0.409  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++|+|+|.|+ ||.+++++..|.+.|. ++.++.|+.++.+.+.+.++.  ..+. +..+               .+.|+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~--~~~~-~~~~---------------~~~Dl   76 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY--AYIN-SLEN---------------QQADI   76 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC--EEES-CCTT---------------CCCSE
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh--hhhh-cccc---------------cchhh
Confidence            5788999988 9999999999999996 699999999998888777643  2221 1111               25799


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      +||+..+.
T Consensus        77 iINaTpiG   84 (167)
T d1npya1          77 LVNVTSIG   84 (167)
T ss_dssp             EEECSSTT
T ss_pred             heeccccC
Confidence            99987543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.89  E-value=0.00061  Score=51.89  Aligned_cols=76  Identities=22%  Similarity=0.306  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+.. ++++... ++  |-.+....   .   ....+..|++
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa~~-~i--~~~~~~~~---~---~~~~~~~d~v   95 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADH-YI--ATLEEGDW---G---EKYFDTFDLI   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSE-EE--EGGGTSCH---H---HHSCSCEEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hccCCcE-Ee--eccchHHH---H---HhhhcccceE
Confidence            4789999987 8999998888888999999999998877654 4555442 22  22211111   1   1223478999


Q ss_pred             EEcccCC
Q 044670           82 YNNAGIV   88 (302)
Q Consensus        82 v~~Ag~~   88 (302)
                      +.+.+..
T Consensus        96 i~~~~~~  102 (168)
T d1piwa2          96 VVCASSL  102 (168)
T ss_dssp             EECCSCS
T ss_pred             EEEecCC
Confidence            9987753

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.87  E-value=0.0041  Score=47.53  Aligned_cols=79  Identities=15%  Similarity=0.313  Sum_probs=53.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHH-HHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE-ITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~~id   79 (302)
                      .|.+|+|+|+ ||+|...+..+...|+ +|+++++++++++. .++++....+   |-.+.+. .+...+.. . .+.+|
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~-Ak~~GA~~~i---n~~~~~~~~~~~~~~~-~-g~G~d  101 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK-AMAVGATECI---SPKDSTKPISEVLSEM-T-GNNVG  101 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHHTCSEEE---CGGGCSSCHHHHHHHH-H-TSCCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH-HHhcCCcEEE---CccccchHHHHHHHHh-c-cccce
Confidence            4789999986 9999999999999995 79999999888774 4555544332   2222221 12222211 1 23699


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|.+.|.
T Consensus       102 ~vi~~~g~  109 (176)
T d1d1ta2         102 YTFEVIGH  109 (176)
T ss_dssp             EEEECSCC
T ss_pred             EEEEeCCc
Confidence            99998883

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.86  E-value=0.0046  Score=46.47  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=54.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh-------------CCCeEEEEecCCCHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL-------------GEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      +|.|.|. |-+|..+++.|.+.|++|++.+|+++..+...+.-             ..++.++   ....++++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil---avp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL---CTPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE---CSCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc---cCcHhhhhhhhhhh
Confidence            4677766 99999999999999999999999987766544421             1223222   23467788888888


Q ss_pred             HHHcCCccEEEEccc
Q 044670           72 VAKYGKLDIMYNNAG   86 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag   86 (302)
                      .....+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766554455666544

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.86  E-value=0.0014  Score=50.27  Aligned_cols=102  Identities=10%  Similarity=-0.047  Sum_probs=56.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC---C----EEEEEecCcc--HHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG---A----KVVIADVQDN--LGQALACKL---G-EDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G---~----~V~~~~r~~~--~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      .+|.||||+|.||.+++..|++..   .    .+.+.+....  .++.+.-++   . .....+.. -++..   +.++ 
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~~---~~~~-   99 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDPY---EVFE-   99 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCHH---HHTT-
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccch---hhcc-
Confidence            369999999999999999999743   2    3444554443  233332222   1 11222221 12221   2233 


Q ss_pred             HHHHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           71 AVAKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                            ..|++|..+|....     ...+   ..+.++.|..-.-.+.+.+.++
T Consensus       100 ------~aDvVvi~ag~~rk-----pg~t---R~Dll~~N~~I~k~~~~~i~~~  139 (175)
T d7mdha1         100 ------DVDWALLIGAKPRG-----PGME---RAALLDINGQIFADQGKALNAV  139 (175)
T ss_dssp             ------TCSEEEECCCCCCC-----TTCC---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------CCceEEEeeccCCC-----CCCc---HHHHHHHHHHHHHHHHHHHHhh
Confidence                  78999999996432     2233   3556777755444444444443

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.81  E-value=0.0021  Score=49.11  Aligned_cols=79  Identities=18%  Similarity=0.258  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNLGQALACKLGEDVCYIHCDVTS-EDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+|+|.|+ |+||...+..+...|++ |+++++++++. ++.++++... ++  |..+ ++.+....+...  .+.+|
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga~~-~i--~~~~~~~~~~~~~~~~~--~~G~d  100 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGATD-CL--NPRELDKPVQDVITELT--AGGVD  100 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSE-EE--CGGGCSSCHHHHHHHHH--TSCBS
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCCCc-cc--CCccchhhhhhhHhhhh--cCCCc
Confidence            4789999975 99999999999999985 66778877765 4555565432 22  2221 122233333322  24799


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      ++|.++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999983

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.80  E-value=0.0082  Score=44.71  Aligned_cols=117  Identities=18%  Similarity=0.108  Sum_probs=66.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +.+++.|.|+ |.+|..++..|+..+ .++++.+.+++.++.....+       +........  ++.+   +.++    
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~~---~~~~----   75 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSYE---AALT----   75 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSHH---HHHT----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cchh---hhhc----
Confidence            4578889997 999999999999888 47999998887665443322       222222111  2221   1222    


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                         .-|++|..||.....-++-...+   -.+.+..|..-...+++.+.++   ...+.++++|
T Consensus        76 ---~adiVvitag~~~~~g~~~~~~t---R~~l~~~n~~iv~~i~~~i~~~---~p~aiviivs  130 (154)
T d1pzga1          76 ---GADCVIVTAGLTKVPGKPDSEWS---RNDLLPFNSKIIREIGQNIKKY---CPKTFIIVVT  130 (154)
T ss_dssp             ---TCSEEEECCSCSSCTTCCGGGCC---GGGGHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             ---CCCeEEEecccccCCCCCCcccc---hhhhhhhhHHHHHHHHHHHHhc---CCCcEEEEeC
Confidence               67999999997542111111122   2344555655445555555443   2344444444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.79  E-value=0.0059  Score=44.88  Aligned_cols=107  Identities=16%  Similarity=0.133  Sum_probs=58.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC------CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG------EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +|.|.|+ |.+|..++..|+.+|.  ++++.++++++.+.....+.      ........   +.++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHHH-----------hC
Confidence            4667787 9999999999999884  79999988876544333332      22222222   2211           12


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      .-|++|..||....   +     .+.-.+.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        68 ~adivvitag~~~~---~-----~~~r~~l~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRK---P-----GETRLDLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             CCceEEEecccccC---c-----CcchhHHhhHHHHHHHHHHHHhhcc---CCCceEEEec
Confidence            57999999996432   1     1223456667765444444444443   2344444443

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.78  E-value=0.008  Score=45.05  Aligned_cols=109  Identities=13%  Similarity=0.123  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      ..+++.|.|+ |.+|..++..|+.+|.  .+++.+++++..+.....+       +........|.   ++    +.   
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~----~~---   87 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SV----TA---   87 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GG----GT---
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hh----cc---
Confidence            4567889996 9999999999999995  7999999877665443322       22222222232   22    22   


Q ss_pred             HHcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEc
Q 044670           73 AKYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTA  137 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~s  137 (302)
                          .-|++|..||....   +  ..+.   .+.++.|..    +++.+.+.+.+.. .+-++++|
T Consensus        88 ----~adiVVitAg~~~~---~--g~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          88 ----NSKIVVVTAGVRQQ---E--GESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             ----TCSEEEECCSCCCC---T--TCCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             ----cccEEEEecCCccc---c--Ccch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeC
Confidence                57999999996432   1  2222   344555644    4444555444333 34455444

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.74  E-value=0.013  Score=42.88  Aligned_cols=106  Identities=17%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCcc--HHHHHHHH------hCCCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA--KVVIADVQDN--LGQALACK------LGEDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~--~~~~~~~~------~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      ++.|+||+|.+|.+++..|+.+|.  .+++.+.+..  ..+.....      +.........|.   ++    +      
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED----T------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG----G------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH----h------
Confidence            578999999999999999999984  6888886432  22211111      123344444332   22    1      


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEE
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFT  136 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~  136 (302)
                       ..-|++|..||....   +  ..+   -.+.++.|..    +++.+.+.+.+.. .+.++.+
T Consensus        69 -~~aDiVvitaG~~~~---~--g~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          69 -AGSDVVVITAGIPRQ---P--GQT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             -TTCSEEEECCCCCCC---T--TCC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEEC
T ss_pred             -hhcCEEEEecccccc---c--CCc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEe
Confidence             167999999996432   2  122   3456777744    5555666655444 3444444

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.74  E-value=0.0039  Score=46.35  Aligned_cols=75  Identities=12%  Similarity=0.090  Sum_probs=56.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH-hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK-LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      .++|.|. |-+|..+++.|.++|+.|+++..+++......+. ....+.++.+|.+|++.++++--      .+.|.+|-
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i------~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGI------DRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTT------TTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhcc------ccCCEEEE
Confidence            4777777 7999999999999999999999888765544433 34568899999999987544322      25678877


Q ss_pred             ccc
Q 044670           84 NAG   86 (302)
Q Consensus        84 ~Ag   86 (302)
                      ...
T Consensus        78 ~~~   80 (153)
T d1id1a_          78 LSD   80 (153)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            554

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.72  E-value=0.023  Score=41.48  Aligned_cols=98  Identities=17%  Similarity=0.167  Sum_probs=60.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++.|+|| |.+|.+++..|+..|  .++++.++++++.+.....+       .....+...  .+.++    +.      
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~----~~------   68 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD----TA------   68 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG----GT------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH----hc------
Confidence            5778896 999999999999988  58999999988765433222       233344332  22222    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHh
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARV  124 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  124 (302)
                       ..|++|..||....     ...+.   .+.++.|..-...+.+.+.++
T Consensus        69 -dadvvvitag~~~~-----~g~~r---~~l~~~N~~i~~~i~~~i~~~  108 (142)
T d1guza1          69 -NSDIVIITAGLPRK-----PGMTR---EDLLMKNAGIVKEVTDNIMKH  108 (142)
T ss_dssp             -TCSEEEECCSCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCeEEEEEEecCCC-----CCCch---HHHHHHHHHHHHHHHHHhhcc
Confidence             67999999996432     12222   355666655444455555443

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.65  E-value=0.015  Score=42.93  Aligned_cols=114  Identities=17%  Similarity=0.197  Sum_probs=63.6

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      .++.|.|+ |.+|.+++..|+..+ .++++.++++++.+.....+       +....+...|  +.++    +       
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~----~-------   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD----L-------   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG----G-------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc----c-------
Confidence            46778896 999999998888877 47889999887765443322       2333333322  1211    1       


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ..-|++|..||....   +-......+-.+.+..|..-...+...+.++   .+.+.++++|
T Consensus        70 ~~advvvitag~~~~---~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~---~p~aivivvt  125 (150)
T d1t2da1          70 AGADVVIVTAGFTKA---PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN---CPNAFIIVVT  125 (150)
T ss_dssp             TTCSEEEECCSCSSC---TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCCcEEEEecccccC---CCCCccccchhHHHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            267999999997542   1111111112345666654444444444443   2234445444

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.58  E-value=0.0022  Score=48.98  Aligned_cols=43  Identities=19%  Similarity=0.167  Sum_probs=38.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK   46 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~   46 (302)
                      .|++.|.|+ |.+|.+++..|+++|++|.+.+|+++..+...+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999998 9999999999999999999999998887766543

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.56  E-value=0.013  Score=42.84  Aligned_cols=108  Identities=17%  Similarity=0.246  Sum_probs=62.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHh-------CCCeEEEE-ecCCCHHHHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKL-------GEDVCYIH-CDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~-~Dl~~~~~v~~~~~~~~~~   74 (302)
                      |++.|.|+ |.+|.+++..|+.++ .++++.+.+++..+.....+       +....+.. .|..+       +.     
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~-------~~-----   68 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD-------TA-----   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG-------GT-----
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH-------hc-----
Confidence            56778896 999999999999887 48999998887655433322       22222222 22222       11     


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                        .-|++|.+||....   +     .+.-.+.+..|.    .+++.+.+.+.+.....++.+.|
T Consensus        69 --~advvvitag~~~~---~-----~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          69 --NSDVIVVTSGAPRK---P-----GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             --TCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             --CCCEEEEeeeccCC---c-----CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence              57999999996432   1     122334555564    45666666665544334444433

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.56  E-value=0.029  Score=40.98  Aligned_cols=109  Identities=12%  Similarity=0.124  Sum_probs=64.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      .++.|+|+ |.+|.+++..|+.+|.  ++++.++++++++.....+      .........+  +.++    +.      
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~~~----~~------   68 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DPEI----CR------   68 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CGGG----GT------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CHHH----hh------
Confidence            35778897 9999999999999884  7999999887665432222      1223333221  1121    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                       .-|++|..||....     ...+.   .+.+..|..=...+.+.+.++   ...+.++++|
T Consensus        69 -daDvVVitaG~~~~-----~g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  118 (143)
T d1llda1          69 -DADMVVITAGPRQK-----PGQSR---LELVGATVNILKAIMPNLVKV---APNAIYMLIT  118 (143)
T ss_dssp             -TCSEEEECCCCCCC-----TTCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             -CCcEEEEecccccC-----CCCch---hhhhhhhHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence             57999999996432     22333   356677765444444444443   2234444444

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.55  E-value=0.0039  Score=47.29  Aligned_cols=78  Identities=21%  Similarity=0.347  Sum_probs=49.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+... .++.. +++  |-.+ +.++...+...  ...+|+
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~-~~i--~~~~-~~~~~~~~~~~--~~g~d~  103 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGAD-HVV--DARR-DPVKQVMELTR--GRGVNV  103 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCS-EEE--ETTS-CHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccc-eee--cCcc-cHHHHHHHhhC--CCCceE
Confidence            3788999886 9999998888888886 5666777776655444 44432 333  3332 33333332211  125999


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      +|.++|.
T Consensus       104 vid~~g~  110 (172)
T d1h2ba2         104 AMDFVGS  110 (172)
T ss_dssp             EEESSCC
T ss_pred             EEEecCc
Confidence            9999983

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.52  E-value=0.0099  Score=45.16  Aligned_cols=82  Identities=12%  Similarity=0.069  Sum_probs=61.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh------------------CCCeEEEEecCCCHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL------------------GEDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------------~~~~~~~~~Dl~~~~~v~   65 (302)
                      ++|-|.|- |-+|..+++.|++.|++|++.+|++++.+++.+.-                  -.....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            45667766 99999999999999999999999998888765431                  022344555677778888


Q ss_pred             HHHHHHHHHcCCccEEEEccc
Q 044670           66 NLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      ++.+.+.....+-+++|....
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888777655567777654

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.49  E-value=0.0045  Score=46.53  Aligned_cols=76  Identities=25%  Similarity=0.287  Sum_probs=50.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      .|++++|.|+ |+||...+..+...|++|+++++++++.+.. +.++....   .|-.+.+.    .+.+.+.....+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga~~~---~~~~~~~~----~~~~~~~~~~~~~~   97 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLV---VNPLKEDA----AKFMKEKVGGVHAA   97 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEE---ECTTTSCH----HHHHHHHHSSEEEE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCccee---cccccchh----hhhcccccCCCceE
Confidence            4788999875 9999999888889999999999988877655 44554322   23343332    22233333455666


Q ss_pred             EEccc
Q 044670           82 YNNAG   86 (302)
Q Consensus        82 v~~Ag   86 (302)
                      |.+++
T Consensus        98 v~~~~  102 (168)
T d1rjwa2          98 VVTAV  102 (168)
T ss_dssp             EESSC
T ss_pred             EeecC
Confidence            66665

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.47  E-value=0.025  Score=41.20  Aligned_cols=106  Identities=18%  Similarity=0.204  Sum_probs=63.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      ++.|.|+ |.+|..++..++.+|  .++++.++++++++.....+      .........|   .++    ++       
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~----~~-------   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD----LK-------   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG----GT-------
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH----hc-------
Confidence            5678897 899999999999887  57999999887665433222      2233333333   222    22       


Q ss_pred             CccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCC-CCEEEEEc
Q 044670           77 KLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQH-KGCILFTA  137 (302)
Q Consensus        77 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~iv~~s  137 (302)
                      .-|++|.+||....     ...+.   .+.+..|..    +++.+.+.+.+.. .+.++++|
T Consensus        67 ~adivvitag~~~~-----~g~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQK-----PGETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCC-----SSCCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccC-----CCcch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            57999999996432     22232   344555643    4455555544433 44444443

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.0018  Score=44.03  Aligned_cols=73  Identities=21%  Similarity=0.261  Sum_probs=49.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||+++|.|. |.-|.++++.|.++|++|++.+.+.+...  .+.+.....++..++ +..    .++       .+|.
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~--~~~~~~~~~~~~~~~-~~~----~~~-------~~d~   67 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPG--LDKLPEAVERHTGSL-NDE----WLM-------AADL   67 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTT--GGGSCTTSCEEESBC-CHH----HHH-------HCSE
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchh--HHHHhhccceeeccc-chh----hhc-------cCCE
Confidence            57999999998 77899999999999999999987554221  112222333333333 222    123       5799


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      +|..-|+.
T Consensus        68 vi~SPGi~   75 (93)
T d2jfga1          68 IVASPGIA   75 (93)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCCC
Confidence            99988863

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.37  E-value=0.0058  Score=45.81  Aligned_cols=73  Identities=15%  Similarity=0.114  Sum_probs=48.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      +..+|.|+|+ |.+|..++..|+.+|.  .+++.+++++.+......+       +........|.   +.    +    
T Consensus        18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~~----~----   85 (159)
T d2ldxa1          18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---NV----S----   85 (159)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---GG----G----
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---hh----h----
Confidence            4456888896 9999999999999884  7999998877665433332       12222222232   21    1    


Q ss_pred             HHcCCccEEEEcccCCC
Q 044670           73 AKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~~~   89 (302)
                         ..-|++|..||...
T Consensus        86 ---~~adivvitag~~~   99 (159)
T d2ldxa1          86 ---ANSKLVIITAGARM   99 (159)
T ss_dssp             ---TTEEEEEECCSCCC
T ss_pred             ---ccccEEEEeccccc
Confidence               26799999999654

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.20  E-value=0.0033  Score=48.05  Aligned_cols=45  Identities=24%  Similarity=0.351  Sum_probs=38.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL   47 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~   47 (302)
                      ++||+|+|.|+ ||.+++++.+|.+.| +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            57999999987 789999999998777 8999999999888776554

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.18  E-value=0.01  Score=44.42  Aligned_cols=81  Identities=10%  Similarity=0.082  Sum_probs=56.1

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----------CCeEEEEecCCCHHHHHHHH---HHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----------EDVCYIHCDVTSEDEITNLV---DTA   71 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------~~~~~~~~Dl~~~~~v~~~~---~~~   71 (302)
                      +|-|.|- |-+|..+|+.|+++|++|++.+|++++.+.+.+...          .+..++..=+.+++++++++   +.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            3556654 999999999999999999999999888776654321          12334445577888888877   334


Q ss_pred             HHHcCCccEEEEccc
Q 044670           72 VAKYGKLDIMYNNAG   86 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag   86 (302)
                      .....+-+++|....
T Consensus        81 ~~~~~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             hhccCCCCEEEECCC
Confidence            444444456666544

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.05  E-value=0.026  Score=40.84  Aligned_cols=76  Identities=14%  Similarity=0.219  Sum_probs=52.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHH-cCCEEEE-EecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHE-NGAKVVI-ADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~-~G~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|.|.|++|-.|+.+++...+ .++.++. +++.+.. .....   .... +..|++.++.+.+.++...+.  ++-.|+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~~~~~---~~~D-vvIDFS~p~~~~~~~~~~~~~--~~~~Vi   73 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-SLLTD---GNTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVV   73 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-HHHHT---TTCS-EEEECCCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-hhhcc---ccCC-EEEEcccHHHHHHHHHHHHhc--CCCEEE
Confidence            578999999999999998776 4567654 3443332 22211   1222 456999999999999888776  566777


Q ss_pred             EcccC
Q 044670           83 NNAGI   87 (302)
Q Consensus        83 ~~Ag~   87 (302)
                      -..|+
T Consensus        74 GTTG~   78 (135)
T d1yl7a1          74 GTTGF   78 (135)
T ss_dssp             CCCCC
T ss_pred             ecccc
Confidence            76663

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.006  Score=47.27  Aligned_cols=41  Identities=24%  Similarity=0.350  Sum_probs=35.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      |+|.|.|| |-+|..+|..++..|++|++.+++++.++...+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            68899999 889999999999999999999999876654433

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.00  E-value=0.018  Score=43.54  Aligned_cols=78  Identities=19%  Similarity=0.267  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHH-HHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSED-EITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~id   79 (302)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. +.++... ++  |.++.+ .+.+.....  ..+..|
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-~~lGa~~-~i--~~~~~d~~~~~~~~~~--~~~G~d   99 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATE-CL--NPKDYDKPIYEVICEK--TNGGVD   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSE-EE--CGGGCSSCHHHHHHHH--TTSCBS
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH-HHcCCcE-EE--cCCCchhHHHHHHHHh--cCCCCc
Confidence            4789999986 9999999999999996 688888888877655 4455432 22  333222 122222222  123699


Q ss_pred             EEEEccc
Q 044670           80 IMYNNAG   86 (302)
Q Consensus        80 ~lv~~Ag   86 (302)
                      ++|-++|
T Consensus       100 ~vid~~g  106 (174)
T d1p0fa2         100 YAVECAG  106 (174)
T ss_dssp             EEEECSC
T ss_pred             EEEEcCC
Confidence            9999888

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.93  E-value=0.14  Score=37.13  Aligned_cols=108  Identities=13%  Similarity=0.117  Sum_probs=63.5

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC--CEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            5 VAIITGGASGIGAAAAKLFHENG--AKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++.|.|+ |.+|.+++..|+.+|  .++++.++++++.+.....+       +........  .|.++    +.      
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~----~~------   68 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----LK------   68 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----GT------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH----hc------
Confidence            5778896 999999999999888  46999999887755432221       222333332  12221    22      


Q ss_pred             CCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcC
Q 044670           76 GKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTAS  138 (302)
Q Consensus        76 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS  138 (302)
                       .-|++|..||....     ...+   -.+.+..|.    .+++.+.+.+.+.....++.+.|
T Consensus        69 -~adiVvitag~~~~-----~g~~---r~~l~~~n~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          69 -GSEIIVVTAGLARK-----PGMT---RLDLAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             -TCSEEEECCCCCCC-----SSCC---HHHHHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             -cccEEEEeccccCC-----CCCc---hHHHHHHhh----HHHHHHHHHHHhhCCCcEEEEec
Confidence             57999999996432     1223   244555554    44555555554444334554444

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.93  E-value=0.054  Score=40.44  Aligned_cols=76  Identities=25%  Similarity=0.299  Sum_probs=60.6

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      .-+++|.|| |-.|..-++....-|+.|.+.+.+.++++.+....+..++..   .++.+.+++.+.       .-|+||
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~---~~~~~~l~~~~~-------~aDivI  100 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELL---YSNSAEIETAVA-------EADLLI  100 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEE---ECCHHHHHHHHH-------TCSEEE
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceee---hhhhhhHHHhhc-------cCcEEE
Confidence            457889987 778999999999999999999999999988887776555543   466777666665       679999


Q ss_pred             EcccCCC
Q 044670           83 NNAGIVD   89 (302)
Q Consensus        83 ~~Ag~~~   89 (302)
                      ..+-+..
T Consensus       101 ~aalipG  107 (168)
T d1pjca1         101 GAVLVPG  107 (168)
T ss_dssp             ECCCCTT
T ss_pred             EeeecCC
Confidence            9887644

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.88  E-value=0.062  Score=40.04  Aligned_cols=82  Identities=10%  Similarity=0.033  Sum_probs=56.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCccHHHHHHHHhC-------------CCeEEEEecCCCHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA--KVVIADVQDNLGQALACKLG-------------EDVCYIHCDVTSEDEITNLV   68 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~-------------~~~~~~~~Dl~~~~~v~~~~   68 (302)
                      |+++|.|. |-||..+++.|.+.|+  +|++.+++++..+...+...             ....++.+ ...++.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIil-a~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVML-SSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEE-CSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccc-cCCchhhhhhh
Confidence            46889975 9999999999999996  68888888777665544320             01122221 24577888888


Q ss_pred             HHHHHHcCCccEEEEcccC
Q 044670           69 DTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~   87 (302)
                      +++.....+-.+++..++.
T Consensus        80 ~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHSCTTCEEEECCSC
T ss_pred             hhhhccccccccccccccc
Confidence            8888776655566666653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.87  E-value=0.0066  Score=43.63  Aligned_cols=70  Identities=14%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      |.++|.|. |.+|..+++.|  +|+.|+++..+++..+....   ..+.++.+|.++++.++++-      ..+.+.+|.
T Consensus         1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~---~~~~~i~Gd~~~~~~L~~a~------i~~A~~vi~   68 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVLR---SGANFVHGDPTRVSDLEKAN------VRGARAVIV   68 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH---TTCEEEESCTTSHHHHHHTT------CTTCSEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh---cCccccccccCCHHHHHHhh------hhcCcEEEE
Confidence            56788876 77899999999  46678888888888776644   35788999999998754421      125677776


Q ss_pred             cc
Q 044670           84 NA   85 (302)
Q Consensus        84 ~A   85 (302)
                      +.
T Consensus        69 ~~   70 (129)
T d2fy8a1          69 NL   70 (129)
T ss_dssp             CC
T ss_pred             ec
Confidence            43

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.85  E-value=0.016  Score=44.87  Aligned_cols=38  Identities=26%  Similarity=0.375  Sum_probs=33.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++||++.|.|- |.||+.+++.|..-|++|+..++..+.
T Consensus        41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             ccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            46899999986 999999999999999999999876654

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.79  E-value=0.0041  Score=46.10  Aligned_cols=35  Identities=20%  Similarity=0.400  Sum_probs=31.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      |+||++||.|| |.+|..-++.|++.|++|++++..
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            58999999999 779999999999999999998643

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.76  E-value=0.0097  Score=46.13  Aligned_cols=117  Identities=15%  Similarity=0.116  Sum_probs=66.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      .|.+|+|.|+ |++|...+..+...|+ +|+++++++++++.. +.++..  . ..|-.+. ++.+.+.++.. ...+|+
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga~--~-~~~~~~~-~~~~~i~~~t~-g~g~D~   97 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFE--I-ADLSLDT-PLHEQIAALLG-EPEVDC   97 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCE--E-EETTSSS-CHHHHHHHHHS-SSCEEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhcccc--E-EEeCCCc-CHHHHHHHHhC-CCCcEE
Confidence            5789999986 8999888887777787 678888887766544 455432  2 2233333 33222333321 125899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCc
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASA  139 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~  139 (302)
                      +|.+.|.-...      .+...      .+..+.-..++.+...++  ..|+|++++-.
T Consensus        98 vid~vG~~~~~------~~~~~------~~~~~~~~~l~~~~~~~r--~gG~v~~~G~~  142 (195)
T d1kola2          98 AVDAVGFEARG------HGHEG------AKHEAPATVLNSLMQVTR--VAGKIGIPGLY  142 (195)
T ss_dssp             EEECCCTTCBC------SSTTG------GGSBCTTHHHHHHHHHEE--EEEEEEECSCC
T ss_pred             EEECccccccC------Ccccc------eeecCcHHHHHHHHHHHh--cCCEEEEeeec
Confidence            99998843211      00000      011222233455555553  46889888743

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.73  E-value=0.047  Score=40.56  Aligned_cols=81  Identities=11%  Similarity=0.087  Sum_probs=55.6

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----------CCCeEEEEecCCCHHHHHHHHHH---H
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----------GEDVCYIHCDVTSEDEITNLVDT---A   71 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~---~   71 (302)
                      +|-|. |.|-+|.++|++|+++|++|.+.+|+.++.+.+...-          -.....+..-+.+.++++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            46666 4599999999999999999999999988776654332          12334555567788888877654   3


Q ss_pred             HHHcCCccEEEEccc
Q 044670           72 VAKYGKLDIMYNNAG   86 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag   86 (302)
                      .....+=+++|....
T Consensus        82 ~~~l~~g~iiid~st   96 (162)
T d3cuma2          82 LAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHSCTTCEEEECSC
T ss_pred             cccCCCCCEEEECCC
Confidence            344333356666544

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.70  E-value=0.08  Score=36.70  Aligned_cols=70  Identities=13%  Similarity=0.138  Sum_probs=54.0

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +.++.|.|| |-+|+-++.+..+-|+++++.+.+++.-...     ..-.++..|+.|.+.+.+++...     .+|++-
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~-----va~~~i~~~~~d~~~l~~~~~~~-----~~DviT   79 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH-----VAHRSHVINMLDGDALRRVVELE-----KPHYIV   79 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG-----GSSEEEECCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh-----cCCeEEECCCCCHHHHHHHHHhh-----CCceEE
Confidence            457899984 8899999999999999999998876532111     11267789999999988888754     689885


Q ss_pred             E
Q 044670           83 N   83 (302)
Q Consensus        83 ~   83 (302)
                      .
T Consensus        80 ~   80 (111)
T d1kjqa2          80 P   80 (111)
T ss_dssp             E
T ss_pred             E
Confidence            4

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=95.58  E-value=0.021  Score=43.64  Aligned_cols=37  Identities=22%  Similarity=0.295  Sum_probs=33.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      ++||++.|.|. |.||+.+++.+...|.+|+..+|+..
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            57999999998 66999999999999999999998754

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.57  E-value=0.044  Score=41.13  Aligned_cols=79  Identities=19%  Similarity=0.336  Sum_probs=49.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHH-HHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDE-ITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~-v~~~~~~~~~~~~~id   79 (302)
                      .|.+|+|.|+ |++|...+..+...|. +|+++++++++.+.. .+++.. +++  |-.+.+. +++......  -+.+|
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~GAd-~~i--n~~~~~~~~~~~~~~~~--~~G~d  100 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGAT-DFV--NPNDHSEPISQVLSKMT--NGGVD  100 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCC-EEE--CGGGCSSCHHHHHHHHH--TSCBS
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH-HHcCCc-EEE--cCCCcchhHHHHHHhhc--cCCcc
Confidence            4789999986 7788888888888876 577788888777554 455533 233  3322221 222222221  13699


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +++.+.|.
T Consensus       101 ~vid~~G~  108 (175)
T d1cdoa2         101 FSLECVGN  108 (175)
T ss_dssp             EEEECSCC
T ss_pred             eeeeecCC
Confidence            99999983

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.54  E-value=0.015  Score=41.76  Aligned_cols=73  Identities=21%  Similarity=0.329  Sum_probs=54.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEE-ecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEE
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIA-DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYN   83 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~   83 (302)
                      ++.|.|++|-.|+.+++.+.++|+.++.. +++...      .+ .... +..|+|.++.+.+.++...+.  ++-+|+-
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~-~~~D-VvIDFS~p~~~~~~l~~~~~~--~~p~ViG   71 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------EL-DSPD-VVIDFSSPEALPKTVDLCKKY--RAGLVLG   71 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------EC-SCCS-EEEECSCGGGHHHHHHHHHHH--TCEEEEC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hh-ccCC-EEEEecCHHHHHHHHHHHHhc--CCCEEEE
Confidence            58999999999999999999999997754 433221      01 1122 356999999999999988877  5667877


Q ss_pred             cccC
Q 044670           84 NAGI   87 (302)
Q Consensus        84 ~Ag~   87 (302)
                      +.|+
T Consensus        72 TTG~   75 (128)
T d1vm6a3          72 TTAL   75 (128)
T ss_dssp             CCSC
T ss_pred             cCCC
Confidence            7774

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.52  E-value=0.018  Score=44.47  Aligned_cols=38  Identities=24%  Similarity=0.167  Sum_probs=33.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      +.||++.|.|. |.||+.+++.+...|++|+..++....
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence            57899999976 999999999999999999999886553

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.49  E-value=0.013  Score=45.54  Aligned_cols=43  Identities=26%  Similarity=0.457  Sum_probs=36.9

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      |+||+++|-| -|.+|.++++.|.+.|++|++.+.+........
T Consensus        25 L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          25 LDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            5799999997 688999999999999999999988776665443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.47  E-value=0.042  Score=41.98  Aligned_cols=38  Identities=18%  Similarity=0.283  Sum_probs=33.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQA   42 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~   42 (302)
                      |+|.|.|| |-+|..+|..++..|++|++.+++++..+.
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            56889998 889999999999999999999998876544

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.015  Score=43.47  Aligned_cols=39  Identities=28%  Similarity=0.543  Sum_probs=34.4

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG   40 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   40 (302)
                      |.||+++|.|= |-||+.+|+.+...|++|+++++++-+.
T Consensus        22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          22 IAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh
Confidence            57999999875 7999999999999999999999887543

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.41  E-value=0.01  Score=44.17  Aligned_cols=35  Identities=11%  Similarity=-0.036  Sum_probs=31.7

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG   40 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   40 (302)
                      +|.|.|+ |.||..++..|++.|++|.+.+|++...
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            6889998 9999999999999999999999987643

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.31  E-value=0.066  Score=39.44  Aligned_cols=24  Identities=17%  Similarity=0.160  Sum_probs=21.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG   27 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G   27 (302)
                      .+|.|+||+|.+|.+++..|+..+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHH
Confidence            478999999999999999998754

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.19  E-value=0.059  Score=40.59  Aligned_cols=80  Identities=15%  Similarity=0.114  Sum_probs=55.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC---------------------CCeEEEEecCCCHHHH
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG---------------------EDVCYIHCDVTSEDEI   64 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~Dl~~~~~v   64 (302)
                      |-|. |.|-+|.+++++|++.|++|.+.+|++++.+.+.+...                     .....+..-+.+...+
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            3344 56999999999999999999999999998887765431                     1122333445556666


Q ss_pred             HHHHHHHHHHcCCccEEEEccc
Q 044670           65 TNLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        65 ~~~~~~~~~~~~~id~lv~~Ag   86 (302)
                      +..+..+.....+=+++++..-
T Consensus        83 ~~~~~~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEECCC
T ss_pred             hhhhhhhhhhccccceecccCc
Confidence            6667766666555566666443

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.15  E-value=0.035  Score=42.68  Aligned_cols=70  Identities=21%  Similarity=0.122  Sum_probs=47.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ++||++.|.|. |.||+.+++.+...|.+|+..++............   ..       ..+++++++.       ..|+
T Consensus        45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~---~~-------~~~~l~~ll~-------~sD~  106 (191)
T d1gdha1          45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ---AT-------FHDSLDSLLS-------VSQF  106 (191)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT---CE-------ECSSHHHHHH-------HCSE
T ss_pred             ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc---cc-------ccCCHHHHHh-------hCCe
Confidence            46899999986 89999999999999999999987655433322211   01       1123344455       4698


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      |+.+....
T Consensus       107 v~l~~plt  114 (191)
T d1gdha1         107 FSLNAPST  114 (191)
T ss_dssp             EEECCCCC
T ss_pred             EEecCCCC
Confidence            88776644

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.15  E-value=0.037  Score=42.23  Aligned_cols=68  Identities=22%  Similarity=0.196  Sum_probs=47.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.||++.|.|. |.||+++++.+...|.+|+..++..........    .+.+     .+   +++++.       ..|+
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~----~~~~-----~~---l~ell~-------~sDi  101 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL----GIEL-----LS---LDDLLA-------RADF  101 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH----TCEE-----CC---HHHHHH-------HCSE
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhc----Ccee-----cc---HHHHHh-------hCCE
Confidence            46889888885 999999999999999999999887665443322    1111     22   334455       4698


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      |+.+....
T Consensus       102 v~~~~Plt  109 (184)
T d1ygya1         102 ISVHLPKT  109 (184)
T ss_dssp             EEECCCCS
T ss_pred             EEEcCCCC
Confidence            88776544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.12  E-value=0.02  Score=40.64  Aligned_cols=36  Identities=33%  Similarity=0.519  Sum_probs=31.3

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      ++|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            3678888876 89999999999999999999988654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.08  E-value=0.021  Score=40.43  Aligned_cols=36  Identities=25%  Similarity=0.343  Sum_probs=31.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .+|+++|.|| |.+|.++|..|.+.|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            3678888877 99999999999999999999988765

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.89  E-value=0.027  Score=42.11  Aligned_cols=38  Identities=13%  Similarity=0.176  Sum_probs=34.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      ++||+++|.|.|.-+|+.++..|.++|++|+.+.....
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            57999999999999999999999999999998865544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.79  E-value=0.027  Score=39.41  Aligned_cols=35  Identities=26%  Similarity=0.397  Sum_probs=31.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            478888887 99999999999999999999988765

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.028  Score=42.29  Aligned_cols=41  Identities=22%  Similarity=0.306  Sum_probs=36.1

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQ   41 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~   41 (302)
                      ++||+++|.|.|.-+|+.++..|+++|++|..+........
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            58999999999999999999999999999999876555443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=94.52  E-value=0.048  Score=41.69  Aligned_cols=39  Identities=15%  Similarity=0.061  Sum_probs=33.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG   40 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   40 (302)
                      ++++++.|.|. |.||+++++.|...|.+|+..++.....
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~   80 (188)
T d2naca1          42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPE   80 (188)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCH
T ss_pred             ccccceeeccc-cccchhhhhhhhccCceEEEEeeccccc
Confidence            46889988885 8999999999999999999999865443

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.48  E-value=0.03  Score=39.75  Aligned_cols=35  Identities=20%  Similarity=0.256  Sum_probs=30.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|.+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            368888887 78999999999999999999998654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.27  E-value=0.037  Score=38.84  Aligned_cols=35  Identities=17%  Similarity=0.129  Sum_probs=30.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            467888887 99999999999999999999988654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.25  E-value=0.032  Score=39.45  Aligned_cols=35  Identities=31%  Similarity=0.289  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +|.++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            467888876 99999999999999999999987643

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.24  E-value=0.28  Score=33.99  Aligned_cols=82  Identities=12%  Similarity=0.103  Sum_probs=56.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      ||+|||.--...+-..+...|.+.|++|+....+...+-+...+....+.++..++-+.+ --++++++++..+.+-+++
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~~~dliilD~~mp~~~-G~e~~~~ir~~~~~~pvi~   79 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMN-GIDAIKEIMKIDPNAKIIV   79 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGC-HHHHHHHHHHHCTTCCEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhccCCEEEEecCCCCCC-HHHHHHHHHHhCCCCcEEE
Confidence            799999999999999999999999999987665554444444444444444444443443 3466777777777777776


Q ss_pred             Ecc
Q 044670           83 NNA   85 (302)
Q Consensus        83 ~~A   85 (302)
                      ..+
T Consensus        80 ls~   82 (118)
T d1u0sy_          80 CSA   82 (118)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.21  E-value=0.045  Score=38.47  Aligned_cols=35  Identities=20%  Similarity=0.289  Sum_probs=30.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .+.++|.|| |.||.++|..|++.|.+|.++.+.+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            467888887 99999999999999999999987654

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.17  E-value=0.039  Score=38.98  Aligned_cols=35  Identities=29%  Similarity=0.446  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.||.++|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            367888887 89999999999999999999988654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.08  E-value=0.043  Score=38.37  Aligned_cols=34  Identities=21%  Similarity=0.306  Sum_probs=30.2

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      |+++|.|| |.+|.++|..|.+.|.+|.++.|.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67888876 99999999999999999999988754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=94.02  E-value=0.042  Score=38.31  Aligned_cols=35  Identities=20%  Similarity=0.432  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            467778776 99999999999999999999988654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.95  E-value=0.061  Score=39.51  Aligned_cols=64  Identities=17%  Similarity=0.229  Sum_probs=46.9

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNN   84 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~   84 (302)
                      ++.+. |+|-+|.++++.|.+.|+++++..|+.++.+++.+.++...      ..+.   +++++       .-|++|.+
T Consensus         2 kIg~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~------~~~~---~~~~~-------~~dvIila   64 (152)
T d2ahra2           2 KIGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY------AMSH---QDLID-------QVDLVILG   64 (152)
T ss_dssp             EEEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB------CSSH---HHHHH-------TCSEEEEC
T ss_pred             EEEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceee------echh---hhhhh-------ccceeeee
Confidence            34555 56999999999999999999999999888888877665322      1232   33344       67988875


Q ss_pred             c
Q 044670           85 A   85 (302)
Q Consensus        85 A   85 (302)
                      .
T Consensus        65 v   65 (152)
T d2ahra2          65 I   65 (152)
T ss_dssp             S
T ss_pred             c
Confidence            4

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=93.87  E-value=0.069  Score=39.10  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=36.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcC-CEEEEEecCccHHHHHHHHhC
Q 044670            5 VAIITGGASGIGAAAAKLFHENG-AKVVIADVQDNLGQALACKLG   48 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~~~~~~~   48 (302)
                      ++.+.|+ |-+|.++++.|++.| ++|.+.+|++++.+.+.++.+
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~   45 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG   45 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc
Confidence            4667766 999999999999888 899999999998888877654

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=93.86  E-value=0.19  Score=37.60  Aligned_cols=73  Identities=15%  Similarity=0.170  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC----------------CCeEEEEecCCCHHHHH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG----------------EDVCYIHCDVTSEDEIT   65 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dl~~~~~v~   65 (302)
                      .|++||..|++.|   ..+..|+++|++|+.++.++...+...+..+                ....++.+|..+...  
T Consensus        20 ~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~--   94 (201)
T d1pjza_          20 PGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA--   94 (201)
T ss_dssp             TTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred             CCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc--
Confidence            5789999999877   5777899999999999999988877766542                234677788876543  


Q ss_pred             HHHHHHHHHcCCccEEEEccc
Q 044670           66 NLVDTAVAKYGKLDIMYNNAG   86 (302)
Q Consensus        66 ~~~~~~~~~~~~id~lv~~Ag   86 (302)
                        ...     ...|.++....
T Consensus        95 --~~~-----~~~D~i~~~~~  108 (201)
T d1pjza_          95 --RDI-----GHCAAFYDRAA  108 (201)
T ss_dssp             --HHH-----HSEEEEEEESC
T ss_pred             --ccc-----cceeEEEEEee
Confidence              111     15677766443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.85  E-value=0.044  Score=43.27  Aligned_cols=35  Identities=23%  Similarity=0.286  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      +.|+|+|.|| |-.|..+|..|+++|++|.+++|+.
T Consensus         5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4568999988 8899999999999999999999853

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.75  E-value=0.056  Score=38.78  Aligned_cols=36  Identities=19%  Similarity=0.273  Sum_probs=31.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      ++|+++|.|| |.+|.++|..|.+.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688889976 99999999999999999999988654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.67  E-value=0.062  Score=37.58  Aligned_cols=36  Identities=19%  Similarity=0.402  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .+|.++|.|| |.||..+|..|++.|.+|.++.|.+.
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            3688888876 99999999999999999999988654

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.61  E-value=0.046  Score=41.12  Aligned_cols=79  Identities=23%  Similarity=0.164  Sum_probs=49.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecC--CCHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDV--TSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl--~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++||+++|.|-|.=+|+-++..|+++|++|..+..+............ -......|+  -.++.+++...       ..
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lk~~~~-------~a   98 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLK-LNKHHVEDLGEYSEDLLKKCSL-------DS   98 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSS-CCCCEEEEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccccee-eeeeccccccccchhHHhhccc-------cC
Confidence            579999999999999999999999999999887654221000000000 000011122  23455555555       57


Q ss_pred             cEEEEcccC
Q 044670           79 DIMYNNAGI   87 (302)
Q Consensus        79 d~lv~~Ag~   87 (302)
                      |++|..+|.
T Consensus        99 DIvIsavG~  107 (171)
T d1edza1          99 DVVITGVPS  107 (171)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEEccCC
Confidence            999988875

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.51  E-value=0.32  Score=36.62  Aligned_cols=82  Identities=20%  Similarity=0.177  Sum_probs=53.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHH---------------HHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEI---------------TNLV   68 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v---------------~~~~   68 (302)
                      -+|+|.|| |-.|.+-++....-|++|.+.+.+.++.+.+.+..+   .++..+..+.+..               +..-
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~---~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~  105 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGG---KFITVDDEAMKTAETAGGYAKEMGEEFRKKQA  105 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTC---EECCC-----------------------CCHH
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhc---ceEEEeccccccccccccchhhcCHHHHHHHH
Confidence            46888887 778999999999999999999999998888876443   2222222222111               1122


Q ss_pred             HHHHHHcCCccEEEEcccCCC
Q 044670           69 DTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        69 ~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      +.+.+....-|++|-.+-+..
T Consensus       106 ~~l~~~l~~aDlVI~talipG  126 (183)
T d1l7da1         106 EAVLKELVKTDIAITTALIPG  126 (183)
T ss_dssp             HHHHHHHTTCSEEEECCCCTT
T ss_pred             HHHHHHHHhhhhheeeeecCC
Confidence            333444457899999887654

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.51  E-value=0.05  Score=38.45  Aligned_cols=35  Identities=17%  Similarity=0.365  Sum_probs=31.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .|.++|.|| |.||.++|..|.+.|.+|.++.|++.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            467888887 99999999999999999999988765

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.47  E-value=0.095  Score=41.33  Aligned_cols=70  Identities=24%  Similarity=0.267  Sum_probs=51.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |+||+++|-|- |-+|.++++.|.+.|++|++++.+...........+.  ..+     ++++   +++      -++|+
T Consensus        37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~--~~~-----~~~~---~~~------~~cDI   99 (230)
T d1leha1          37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGA--DAV-----APNA---IYG------VTCDI   99 (230)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCC--EEC-----CGGG---TTT------CCCSE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCC--ccc-----CCcc---ccc------ccccE
Confidence            57999998875 8999999999999999999999888777776665543  111     2221   111      27899


Q ss_pred             EEEcccC
Q 044670           81 MYNNAGI   87 (302)
Q Consensus        81 lv~~Ag~   87 (302)
                      ++-+|--
T Consensus       100 l~PcA~~  106 (230)
T d1leha1         100 FAPCALG  106 (230)
T ss_dssp             EEECSCS
T ss_pred             ecccccc
Confidence            9998863

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.40  E-value=0.045  Score=44.05  Aligned_cols=34  Identities=24%  Similarity=0.300  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      +|+|+|.|| |-=|...|..|+++|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999988 6679999999999999999998754

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.062  Score=40.76  Aligned_cols=37  Identities=22%  Similarity=0.265  Sum_probs=32.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      +.|+|+|.|| |--|.+.|..|+++|++|++..+++..
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            5789999988 788999999999999999999987653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.36  E-value=0.21  Score=37.89  Aligned_cols=37  Identities=27%  Similarity=0.302  Sum_probs=32.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.++++.|.| .|.||+.+++.+...|.+|+..++...
T Consensus        42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   78 (188)
T d1sc6a1          42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENK   78 (188)
T ss_dssp             STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceEEEEee-cccchhhhhhhcccccceEeecccccc
Confidence            4688998885 599999999999999999999987654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=93.35  E-value=0.04  Score=41.80  Aligned_cols=36  Identities=14%  Similarity=0.221  Sum_probs=31.1

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCccH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQDNL   39 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~   39 (302)
                      +|+|+|.|| |-.|...|..|+++|++ |+++.|+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            688999988 88999999999999995 8898886543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.34  E-value=0.15  Score=37.25  Aligned_cols=37  Identities=19%  Similarity=0.179  Sum_probs=30.1

Q ss_pred             CCEEEEe-CCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            3 GKVAIIT-GGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         3 gk~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++.++|. .+++.||.++|..|+++|.+|.++.+.+..
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            4555555 466899999999999999999999987643

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.08  E-value=0.048  Score=41.79  Aligned_cols=41  Identities=15%  Similarity=0.245  Sum_probs=35.5

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      ++|.|.|| |-.|.++|..|++.|++|.+.+|+++..+.+.+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhh
Confidence            56888887 668999999999999999999999888776654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.06  E-value=0.052  Score=38.33  Aligned_cols=32  Identities=16%  Similarity=0.208  Sum_probs=28.3

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      +.++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56778876 999999999999999999999875

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.92  E-value=0.08  Score=37.49  Aligned_cols=35  Identities=20%  Similarity=0.415  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      .+.++|.|| |.||.++|..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            467888887 99999999999999999999987653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=92.73  E-value=0.06  Score=39.36  Aligned_cols=35  Identities=11%  Similarity=0.063  Sum_probs=26.4

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcC----CEEEEEecCcc
Q 044670            4 KVAIITGGASGIGAAAAKLFHENG----AKVVIADVQDN   38 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G----~~V~~~~r~~~   38 (302)
                      |+|-|.||||..|..+.+.|+++.    ..++...+++.
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            468899999999999999888764    24555555443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.41  E-value=0.56  Score=34.06  Aligned_cols=64  Identities=16%  Similarity=0.127  Sum_probs=43.0

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc--CCEEEEE--ecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN--GAKVVIA--DVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      |++.|.|+||-||.....-+.+.  .++|+..  .++-+.+.+...+++.+..+    +.|++....+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~----i~d~~~~~~l~~~l   69 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAV----MDDEASAKLLKTML   69 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEE----ESSHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccc----cccHHHHHHHHHHh
Confidence            67999999999999999988886  4677664  44555666666666655433    34555544444433

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.39  E-value=0.38  Score=37.92  Aligned_cols=33  Identities=24%  Similarity=0.502  Sum_probs=28.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEec
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADV   35 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r   35 (302)
                      ++++|+|.|+ ||+|.+++..|++.|- ++++++.
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~   62 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDF   62 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECC
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECC
Confidence            4678999995 8999999999999996 5777754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.33  E-value=0.095  Score=38.72  Aligned_cols=35  Identities=26%  Similarity=0.445  Sum_probs=29.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC--EEEEEecCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA--KVVIADVQD   37 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~   37 (302)
                      .||+|+|.|| |..|..+|..|.+.|.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            5899999998 8889999999999885  678877654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.25  E-value=0.24  Score=33.17  Aligned_cols=71  Identities=14%  Similarity=0.207  Sum_probs=46.6

Q ss_pred             CCCEEEEeCCCChHH-HHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            2 EGKVAIITGGASGIG-AAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         2 ~gk~vlVTGas~gIG-~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      +.|++.+.|- +|+| .++|+.|.++|+.|...++..........+.+  +.+...+-  ++.    +       ...|.
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~G--i~v~~g~~--~~~----i-------~~~d~   70 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAG--AKIYIGHA--EEH----I-------EGASV   70 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTT--CEEEESCC--GGG----G-------TTCSE
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCC--CeEEECCc--ccc----C-------CCCCE
Confidence            4567778775 4555 56799999999999999987665544444444  34433322  111    1       26799


Q ss_pred             EEEcccCC
Q 044670           81 MYNNAGIV   88 (302)
Q Consensus        81 lv~~Ag~~   88 (302)
                      +|...++.
T Consensus        71 vV~S~AI~   78 (96)
T d1p3da1          71 VVVSSAIK   78 (96)
T ss_dssp             EEECTTSC
T ss_pred             EEECCCcC
Confidence            99988864

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.22  E-value=0.09  Score=40.44  Aligned_cols=70  Identities=24%  Similarity=0.248  Sum_probs=50.7

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      ++||+||=.|++.|+   ++..++..|+ +|+.++.++...+...+.. .++.++.+|+.+.+             +++|
T Consensus        47 l~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~-~~~~~~~~D~~~l~-------------~~fD  109 (197)
T d1ne2a_          47 IGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC-GGVNFMVADVSEIS-------------GKYD  109 (197)
T ss_dssp             SBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC-TTSEEEECCGGGCC-------------CCEE
T ss_pred             CCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc-ccccEEEEehhhcC-------------Ccce
Confidence            479999999987772   3344666775 6999999887776555444 56789999986432             4899


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      +||.|--+
T Consensus       110 ~Vi~NPPf  117 (197)
T d1ne2a_         110 TWIMNPPF  117 (197)
T ss_dssp             EEEECCCC
T ss_pred             EEEeCccc
Confidence            99998643

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=92.13  E-value=0.15  Score=37.66  Aligned_cols=38  Identities=26%  Similarity=0.484  Sum_probs=34.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      +.||+++|.|= |-+|+.+|.+|...|++|+++..++-+
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            57999999875 889999999999999999999988754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.02  E-value=0.11  Score=40.04  Aligned_cols=39  Identities=23%  Similarity=0.238  Sum_probs=33.2

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      +|.|. |.|.+|..+|..|++.|++|++.+.++++.+.+.
T Consensus         2 kI~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln   40 (202)
T d1mv8a2           2 RISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN   40 (202)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             EEEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence            46666 5699999999999999999999999887766654

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=92.01  E-value=0.3  Score=35.04  Aligned_cols=83  Identities=11%  Similarity=0.095  Sum_probs=57.3

Q ss_pred             CCCEEEEeCCC---ChHHHHHHHHHHHcCCEEEEEecCccHHH-----HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGGA---SGIGAAAAKLFHENGAKVVIADVQDNLGQ-----ALACKLGEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVTGas---~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +-|++.|.|+|   +..|..+++.|.+.|++|+.+........     .-.++++..+..+.. +..++.+.++++++.+
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i-~vp~~~~~~~~~e~~~   96 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL-FVKPKLTMEYVEQAIK   96 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE-CSCHHHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE-EeCHHHHHHHHHHHHH
Confidence            35889999998   67999999999999999988864432111     111222333333222 3678889999999887


Q ss_pred             HcCCccEEEEcccC
Q 044670           74 KYGKLDIMYNNAGI   87 (302)
Q Consensus        74 ~~~~id~lv~~Ag~   87 (302)
                      .  ++..++...|.
T Consensus        97 ~--g~k~v~~~~G~  108 (139)
T d2d59a1          97 K--GAKVVWFQYNT  108 (139)
T ss_dssp             H--TCSEEEECTTC
T ss_pred             h--CCCEEEEeccc
Confidence            7  56788887774

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.87  E-value=0.095  Score=40.37  Aligned_cols=37  Identities=35%  Similarity=0.391  Sum_probs=32.6

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.||++.|.|. |.||+.+++.|...|.+|+..++...
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            46899999986 89999999999999999999988654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.75  E-value=0.13  Score=40.71  Aligned_cols=36  Identities=22%  Similarity=0.315  Sum_probs=30.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.++|+|.|| |--|..+|..|+++|++|+++.|++.
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3578999988 77799999999999999999988643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.62  E-value=0.13  Score=40.26  Aligned_cols=37  Identities=24%  Similarity=0.475  Sum_probs=32.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccH
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNL   39 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~   39 (302)
                      ++|+|+|.|| |.-|...|..|+++|++|+++.++...
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            4689999998 777999999999999999999876543

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.54  E-value=0.32  Score=35.45  Aligned_cols=79  Identities=8%  Similarity=0.045  Sum_probs=53.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC---------CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG---------EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      |-+.|- |-+|.+++++|++.|+.+ +..|+.++.....+...         .+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445555 899999999999999866 46777777666655542         1233444556777888888877766555


Q ss_pred             CccEEEEccc
Q 044670           77 KLDIMYNNAG   86 (302)
Q Consensus        77 ~id~lv~~Ag   86 (302)
                      +-.++|.+.-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            5555555443

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.19  E-value=0.29  Score=37.50  Aligned_cols=71  Identities=24%  Similarity=0.238  Sum_probs=50.1

Q ss_pred             CCCCEEEEeCCCCh-HHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASG-IGAAAAKLFHENGA-KVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++|++||=-|+..| +|.    .++..|+ +|++++.++...+...+.+   +.+..++..|..+.             .
T Consensus        45 l~g~~vLDlg~GtG~l~i----~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------~  107 (201)
T d1wy7a1          45 IEGKVVADLGAGTGVLSY----GALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------N  107 (201)
T ss_dssp             STTCEEEEETCTTCHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------C
T ss_pred             CCCCEEEECcCcchHHHH----HHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------C
Confidence            47899997777655 443    4456775 7999999987776655433   56778888886442             2


Q ss_pred             CCccEEEEcccCC
Q 044670           76 GKLDIMYNNAGIV   88 (302)
Q Consensus        76 ~~id~lv~~Ag~~   88 (302)
                      +++|.||.|.-+.
T Consensus       108 ~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         108 SRVDIVIMNPPFG  120 (201)
T ss_dssp             CCCSEEEECCCCS
T ss_pred             CcCcEEEEcCccc
Confidence            4899999988653

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.99  E-value=0.15  Score=42.13  Aligned_cols=36  Identities=31%  Similarity=0.442  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.|+|+|.|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4689999988 77799999999999999999977654

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=90.92  E-value=0.11  Score=41.40  Aligned_cols=31  Identities=23%  Similarity=0.389  Sum_probs=28.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      |+|.|| |-.|..+|.+|+++|.+|+++++++
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            777876 8999999999999999999999865

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.84  E-value=0.086  Score=45.67  Aligned_cols=34  Identities=18%  Similarity=0.393  Sum_probs=28.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      ++.+|||.|+ ||||.++++.|+..|. ++.+++.+
T Consensus        36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            3567999998 7899999999999997 68887653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=90.80  E-value=0.14  Score=41.71  Aligned_cols=36  Identities=22%  Similarity=0.377  Sum_probs=30.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +.|+|+|.|| |--|...|..|+++|++|+++.+++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            3578999998 66799999999999999999987543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.48  E-value=0.22  Score=38.82  Aligned_cols=57  Identities=14%  Similarity=0.183  Sum_probs=44.4

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhC---------------------CCeEEEEecCCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLG---------------------EDVCYIHCDVTS   60 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------------~~~~~~~~Dl~~   60 (302)
                      .+.+||..|+..|   ..+..|+++|++|+.++-++...+...+..+                     .++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            4678999999887   6788999999999999999888776655432                     356777788754


Q ss_pred             H
Q 044670           61 E   61 (302)
Q Consensus        61 ~   61 (302)
                      .
T Consensus       122 l  122 (229)
T d2bzga1         122 L  122 (229)
T ss_dssp             G
T ss_pred             c
Confidence            3

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.46  E-value=0.17  Score=37.99  Aligned_cols=32  Identities=19%  Similarity=0.234  Sum_probs=25.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEEecC
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-KVVIADVQ   36 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~   36 (302)
                      +|-|.||||..|..+++.|+++-. ++..+..+
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            688999999999999999998764 45444433

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.43  E-value=0.28  Score=34.56  Aligned_cols=76  Identities=16%  Similarity=0.198  Sum_probs=53.8

Q ss_pred             CCEEEEeCCCC----------hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHH
Q 044670            3 GKVAIITGGAS----------GIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAV   72 (302)
Q Consensus         3 gk~vlVTGas~----------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   72 (302)
                      -|+|||.|+..          .-+.+.+++|.++|++++++..+++....-.+ ..+++.+   +--..++|.++++.- 
T Consensus         7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~aD~lYf---ePlt~e~v~~Ii~~E-   81 (127)
T d1a9xa3           7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-MADATYI---EPIHWEVVRKIIEKE-   81 (127)
T ss_dssp             CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-GSSEEEC---SCCCHHHHHHHHHHH-
T ss_pred             CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-hcceeee---ecCCHHHHHHHHHHh-
Confidence            47899999843          45788899999999999999887765432211 2233333   445678877777754 


Q ss_pred             HHcCCccEEEEcccC
Q 044670           73 AKYGKLDIMYNNAGI   87 (302)
Q Consensus        73 ~~~~~id~lv~~Ag~   87 (302)
                          ++|.++-..|.
T Consensus        82 ----~pd~il~~~GG   92 (127)
T d1a9xa3          82 ----RPDAVLPTMGG   92 (127)
T ss_dssp             ----CCSEEECSSSH
T ss_pred             ----CcCCeEEEeee
Confidence                89999887763

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.38  E-value=0.23  Score=36.05  Aligned_cols=38  Identities=13%  Similarity=0.068  Sum_probs=30.4

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQAL   43 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~   43 (302)
                      +|-|.| .|-+|.++++.|+++|+.|+..+++++.....
T Consensus         2 kIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           2 RVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            355664 59999999999999999999988877655443

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.34  E-value=3.5  Score=33.38  Aligned_cols=76  Identities=13%  Similarity=0.090  Sum_probs=49.8

Q ss_pred             CCCEEEEe-CCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C---CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIIT-GGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G---EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVT-Gas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      +|++||=. .+||+++.+    ++..|++|+.++.+....+...+..   +   .+++++..|+      -++++.....
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence            46777744 456665554    4567999999998887766554432   1   3578887775      3345555555


Q ss_pred             cCCccEEEEcccC
Q 044670           75 YGKLDIMYNNAGI   87 (302)
Q Consensus        75 ~~~id~lv~~Ag~   87 (302)
                      ..+.|+||.+.-.
T Consensus       202 ~~~fD~IilDPP~  214 (309)
T d2igta1         202 GSTYDIILTDPPK  214 (309)
T ss_dssp             TCCBSEEEECCCS
T ss_pred             CCCCCEEEECCCc
Confidence            5679999998643

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=90.23  E-value=0.17  Score=40.49  Aligned_cols=33  Identities=36%  Similarity=0.428  Sum_probs=30.0

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD   34 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   34 (302)
                      ++||+++|.| .|-+|.++++.|.+.|++|+.++
T Consensus        34 l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          34 LVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             STTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            5799999998 69999999999999999998774

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.11  E-value=1.8  Score=35.39  Aligned_cols=112  Identities=15%  Similarity=0.100  Sum_probs=64.8

Q ss_pred             CCCEEEEeCC-CChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh---C--CCeEEEEecCCCHHHHHHHHHHHHHH
Q 044670            2 EGKVAIITGG-ASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL---G--EDVCYIHCDVTSEDEITNLVDTAVAK   74 (302)
Q Consensus         2 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~~~~   74 (302)
                      .|++||=.++ +|+++.++    +..|+ +|+.++.++...+...+..   +  .+++++..|+.      +....+...
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            3778886655 45555544    45575 7999999988766554433   2  45777777753      234444444


Q ss_pred             cCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEc
Q 044670           75 YGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTA  137 (302)
Q Consensus        75 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~s  137 (302)
                      ..+.|.||.+.-....        ...+....    ......++..+.+.+++  +|.+++.+
T Consensus       215 ~~~fD~Vi~DpP~~~~--------~~~~~~~~----~~~y~~l~~~a~~ll~p--GG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFVQ--------HEKDLKAG----LRAYFNVNFAGLNLVKD--GGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSCS--------SGGGHHHH----HHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred             cCCCCchhcCCccccC--------CHHHHHHH----HHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence            5589999998764332        11122221    12234466667776643  45555544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.97  E-value=0.18  Score=37.91  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=29.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~   38 (302)
                      +|.|.|+ |..|.++|..|++.|++|.+.+|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            5778887 88999999999999999999988544

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=89.85  E-value=1  Score=36.88  Aligned_cols=77  Identities=14%  Similarity=0.108  Sum_probs=50.3

Q ss_pred             CCCEEEEeCC-CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGG-ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      +|++||=.++ +|+++.++    +..|.+|+.++.++...+...+..   + .++.++..|..+      +.+.+.....
T Consensus       145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~~  214 (318)
T d1wxxa2         145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEGE  214 (318)
T ss_dssp             CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTTC
T ss_pred             CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhhc
Confidence            5778885544 56665443    445778999999988776655443   3 467888887533      2334444445


Q ss_pred             CccEEEEcccCC
Q 044670           77 KLDIMYNNAGIV   88 (302)
Q Consensus        77 ~id~lv~~Ag~~   88 (302)
                      +.|.||.+.-.+
T Consensus       215 ~fD~Vi~DpP~~  226 (318)
T d1wxxa2         215 RFDLVVLDPPAF  226 (318)
T ss_dssp             CEEEEEECCCCS
T ss_pred             CCCEEEEcCCcc
Confidence            799999987644

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.85  E-value=0.36  Score=39.25  Aligned_cols=25  Identities=24%  Similarity=0.259  Sum_probs=21.9

Q ss_pred             CChHHHHHHHHHHHcCCEEEEEecC
Q 044670           12 ASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus        12 s~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      ||-.|.++|+.+..+|+.|+++.+.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4679999999999999999988643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=89.71  E-value=0.39  Score=33.42  Aligned_cols=77  Identities=10%  Similarity=0.182  Sum_probs=52.7

Q ss_pred             CCCEEEEeCCCC----------hHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            2 EGKVAIITGGAS----------GIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         2 ~gk~vlVTGas~----------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      ..|++||.|+..          .-+.+.+++|.++|++++++..|++....-. ...+++.+   +--..+.|.++++.-
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~-d~aD~lYf---eplt~e~v~~Ii~~E   78 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY-DTSDRLYF---EPVTLEDVLEIVRIE   78 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST-TSSSEEEC---CCCSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh-hhcCceEE---ccCCHHHHHHHHHHh
Confidence            357899999843          4577899999999999999988776543211 11233333   344677777766654


Q ss_pred             HHHcCCccEEEEcccC
Q 044670           72 VAKYGKLDIMYNNAGI   87 (302)
Q Consensus        72 ~~~~~~id~lv~~Ag~   87 (302)
                           ++|.++-..|.
T Consensus        79 -----~p~~ii~~~GG   89 (121)
T d1a9xa4          79 -----KPKGVIVQYGG   89 (121)
T ss_dssp             -----CCSEEECSSST
T ss_pred             -----CCCEEEeehhh
Confidence                 78999887763

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.31  E-value=0.25  Score=39.18  Aligned_cols=34  Identities=32%  Similarity=0.480  Sum_probs=30.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEec
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADV   35 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r   35 (302)
                      ++||+++|-| -|-+|.++++.|.+.|++|+.++-
T Consensus        29 l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          29 IEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence            5799999997 699999999999999999987653

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=88.86  E-value=0.55  Score=34.10  Aligned_cols=52  Identities=13%  Similarity=0.141  Sum_probs=38.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHc--CCEEEEEe--cCccHHHHHHHHhCCCeEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHEN--GAKVVIAD--VQDNLGQALACKLGEDVCY   53 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~--r~~~~~~~~~~~~~~~~~~   53 (302)
                      +.|++.|.|+||-||.....-+.+.  .++|+...  ++-+.+.+...+++....+
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~   56 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAV   56 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccce
Confidence            4589999999999999999988775  47777653  4445666666666655443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=88.76  E-value=0.22  Score=36.95  Aligned_cols=32  Identities=19%  Similarity=0.103  Sum_probs=26.5

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIAD   34 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   34 (302)
                      +++.|+|.|| |.+|.++|..|.+.|++|.++.
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            4678888877 9999999999999998765543

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.72  E-value=0.22  Score=38.28  Aligned_cols=31  Identities=29%  Similarity=0.351  Sum_probs=27.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      |+|.|| |--|..+|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677775 8889999999999999999998864

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.64  E-value=0.32  Score=39.53  Aligned_cols=33  Identities=24%  Similarity=0.383  Sum_probs=29.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEe
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIAD   34 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~   34 (302)
                      |+||+++|-|- |-+|.++++.|.+.|++|+.++
T Consensus        34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            47899999987 8999999999999999998875

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=88.48  E-value=0.32  Score=39.73  Aligned_cols=42  Identities=24%  Similarity=0.355  Sum_probs=27.1

Q ss_pred             CEEEEeCCCCh--H--HHHHHHHHHHcCCEEEEEecCccHHHHHHH
Q 044670            4 KVAIITGGASG--I--GAAAAKLFHENGAKVVIADVQDNLGQALAC   45 (302)
Q Consensus         4 k~vlVTGas~g--I--G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~   45 (302)
                      |+|+|++|+.|  +  ..+++++|.++|++|..++...........
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~   46 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP   46 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccc
Confidence            56777765433  2  346889999999999887755443333333

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=88.38  E-value=0.24  Score=39.56  Aligned_cols=31  Identities=29%  Similarity=0.535  Sum_probs=27.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      |+|.|| |-.|..+|.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 8889999999999999999998754

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=88.27  E-value=0.24  Score=36.63  Aligned_cols=81  Identities=14%  Similarity=0.136  Sum_probs=52.7

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHc-CCEEEE-EecCccHH-H----HHH-------------HHhCCCeEEEEecCCCHHH
Q 044670            4 KVAIITGGASGIGAAAAKLFHEN-GAKVVI-ADVQDNLG-Q----ALA-------------CKLGEDVCYIHCDVTSEDE   63 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~-G~~V~~-~~r~~~~~-~----~~~-------------~~~~~~~~~~~~Dl~~~~~   63 (302)
                      -++.|.|++|-+|+.+++...+. +..++. ++|..... .    +..             +....... +..|++.++.
T Consensus         5 ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~   83 (162)
T d1diha1           5 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEG   83 (162)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHH
Confidence            36899999999999999999875 556543 33322110 0    000             00001222 4479999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcccC
Q 044670           64 ITNLVDTAVAKYGKLDIMYNNAGI   87 (302)
Q Consensus        64 v~~~~~~~~~~~~~id~lv~~Ag~   87 (302)
                      +.+.++...+.  ++..|+-..|+
T Consensus        84 ~~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          84 TLNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHHhc--cceeEEecCCC
Confidence            99988877665  67788877774

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.27  E-value=0.34  Score=38.11  Aligned_cols=33  Identities=27%  Similarity=0.363  Sum_probs=28.3

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHH-cCCEEEEEe
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHE-NGAKVVIAD   34 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~-~G~~V~~~~   34 (302)
                      ++|++++|-| .|-+|+++++.|.+ .|++|+.++
T Consensus        29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            5789999886 79999999999975 599998765

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.12  E-value=0.97  Score=36.74  Aligned_cols=72  Identities=22%  Similarity=0.267  Sum_probs=48.8

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHH--HHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGA-KVVIADVQDNLGQAL--ACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~--~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      ++||+||-.|++.|+   ++..+++.|+ +|++++.++......  ....  ..++.++..|+.+...          ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~~  100 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------PV  100 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------SC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------cc
Confidence            368999999998774   5667777886 688888876543221  1111  3678899988876431          11


Q ss_pred             CCccEEEEcc
Q 044670           76 GKLDIMYNNA   85 (302)
Q Consensus        76 ~~id~lv~~A   85 (302)
                      .+.|+|+...
T Consensus       101 ~~~D~Ivse~  110 (311)
T d2fyta1         101 EKVDVIISEW  110 (311)
T ss_dssp             SCEEEEEECC
T ss_pred             ccceEEEEee
Confidence            3789998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=87.97  E-value=1.2  Score=30.64  Aligned_cols=80  Identities=16%  Similarity=0.155  Sum_probs=52.8

Q ss_pred             CEEEEeCCC---ChHHHHHHHHHHHcCCEEEEEecCccHHH-----HHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc
Q 044670            4 KVAIITGGA---SGIGAAAAKLFHENGAKVVIADVQDNLGQ-----ALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKY   75 (302)
Q Consensus         4 k~vlVTGas---~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   75 (302)
                      |++.|.|+|   +-.|..+.+.|.+.|++|+.+..+.+...     .-..+++..++.... +..++.+.++++++.+. 
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi-~vp~~~~~~~l~~~~~~-   79 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF-VVPPKVGLQVAKEAVEA-   79 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE-CSCHHHHHHHHHHHHHT-
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE-EeCHHHHHHHHHHHHhc-
Confidence            789999998   55999999999999999888754432211     011222333333221 35678888888888765 


Q ss_pred             CCccEEEEccc
Q 044670           76 GKLDIMYNNAG   86 (302)
Q Consensus        76 ~~id~lv~~Ag   86 (302)
                       .+..++...|
T Consensus        80 -g~k~v~~~~g   89 (116)
T d1y81a1          80 -GFKKLWFQPG   89 (116)
T ss_dssp             -TCCEEEECTT
T ss_pred             -CCceEEeccc
Confidence             4667766555

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.67  E-value=0.27  Score=39.77  Aligned_cols=32  Identities=19%  Similarity=0.274  Sum_probs=27.3

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGA-KVVIADVQD   37 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~   37 (302)
                      .|+|.|| |-+|.++|.+|+++|. +|++++|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3778877 7999999999999996 599998864

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=87.63  E-value=4.3  Score=30.34  Aligned_cols=141  Identities=11%  Similarity=0.030  Sum_probs=75.3

Q ss_pred             CCEEEEeCC--CChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGG--ASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGa--s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~   80 (302)
                      |++++|...  ...+...++..|...|..++.+.-+..                    .+.+.    +.......+.++.
T Consensus        25 g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~--------------------~~~~~----l~~~~~~~~~~~~   80 (209)
T d2fr1a2          25 GTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR--------------------CGRDE----LAERLRSVGEVAG   80 (209)
T ss_dssp             SEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT--------------------CCHHH----HHHHHTTSCCCSE
T ss_pred             CcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc--------------------cCHHH----HHHHhhccCCCCe
Confidence            444444432  234777888888888888776532211                    12222    2223334467899


Q ss_pred             EEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHHHHHHHHH
Q 044670           81 MYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTVSKYGIIA  160 (302)
Q Consensus        81 lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  160 (302)
                      |||..+.....   .....  ...    ..+...+.+++++...   ....++.+++..+.... .+-..-....+++-+
T Consensus        81 vv~l~~~~~~~---~~~~~--~~~----~~~~~~l~l~qal~~~---~~~~~l~~vT~~a~~~~-~~d~~~~p~~A~l~G  147 (209)
T d2fr1a2          81 VLSLLAVDEAE---PEEAP--LAL----ASLADTLSLVQAMVSA---ELGCPLWTVTESAVATG-PFERVRNAAHGALWG  147 (209)
T ss_dssp             EEECTTTTCCC---CSSCG--GGC----HHHHHHHHHHHHHHHT---TCCCCEEEEEESCSCSS-TTSCCSCGGGHHHHH
T ss_pred             EEEeCCCCCCC---Ccchh--HHH----HHHHHHHHHHHHHHhC---CCCCcEEEEEcCCcccC-CCcccCCHhHHhHHH
Confidence            99987754321   11111  111    1233445566666543   23455666654432221 111122356788999


Q ss_pred             HHHHHHHHHCCCCcEEEEEe
Q 044670          161 LVKILAAELRQYGLRVNCVS  180 (302)
Q Consensus       161 ~~~~la~e~~~~gi~v~~v~  180 (302)
                      |+|.++.|+....+++..+.
T Consensus       148 l~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         148 VGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             HHHHHHHHCGGGEEEEEEEC
T ss_pred             HHHHHHHhCCCceEEEEECC
Confidence            99999999876445555553

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=87.58  E-value=3.9  Score=29.81  Aligned_cols=74  Identities=14%  Similarity=0.195  Sum_probs=41.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHc-----CCEEEEEecCccHHHHHHHHh-------CCCeEEEEecCCCHHHHHHHHHH
Q 044670            3 GKVAIITGGASGIGAAAAKLFHEN-----GAKVVIADVQDNLGQALACKL-------GEDVCYIHCDVTSEDEITNLVDT   70 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~-----G~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dl~~~~~v~~~~~~   70 (302)
                      ..++.|.||++.....++..++..     +.++++.+.++++++.....+       +........  +|.   +++++ 
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~---~eal~-   76 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDP---EEAFT-   76 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCH---HHHHS-
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CCh---hhccC-
Confidence            345777787554333344444432     247999999988776332221       333333322  232   22233 


Q ss_pred             HHHHcCCccEEEEcccCC
Q 044670           71 AVAKYGKLDIMYNNAGIV   88 (302)
Q Consensus        71 ~~~~~~~id~lv~~Ag~~   88 (302)
                            .-|+||+.||..
T Consensus        77 ------~AD~Vvitag~~   88 (167)
T d1u8xx1          77 ------DVDFVMAHIRVG   88 (167)
T ss_dssp             ------SCSEEEECCCTT
T ss_pred             ------CCCEEEECCCcC
Confidence                  689999999964

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=87.21  E-value=0.44  Score=36.87  Aligned_cols=70  Identities=11%  Similarity=0.158  Sum_probs=53.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEE
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIM   81 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~l   81 (302)
                      ++++||=.|++.|   .+++.|+++|++|++++-+++..+...+..+.++.++..|+.+..     .      .++.|.+
T Consensus        20 ~~~~VLDiGcG~G---~~~~~l~~~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~~~-----~------~~~fD~I   85 (225)
T d2p7ia1          20 RPGNLLELGSFKG---DFTSRLQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQ-----L------PRRYDNI   85 (225)
T ss_dssp             CSSCEEEESCTTS---HHHHHHTTTCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCC-----C------SSCEEEE
T ss_pred             CCCcEEEEeCCCc---HHHHHHHHcCCeEEEEeCcHHHhhhhhcccccccccccccccccc-----c------ccccccc
Confidence            5778888888777   567788899999999999988877776666667888888765432     1      1368988


Q ss_pred             EEcc
Q 044670           82 YNNA   85 (302)
Q Consensus        82 v~~A   85 (302)
                      +...
T Consensus        86 ~~~~   89 (225)
T d2p7ia1          86 VLTH   89 (225)
T ss_dssp             EEES
T ss_pred             cccc
Confidence            7644

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.92  E-value=0.77  Score=35.71  Aligned_cols=71  Identities=15%  Similarity=0.122  Sum_probs=51.7

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++++||=.|++.|   .++..|+++|++|++++.+++..+...+..   +.++.++.+|+.+..-           -+..
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            3578999998877   567789999999999999987766544432   4578899998866431           1268


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |.++..-+
T Consensus       107 D~I~~~~~  114 (251)
T d1wzna1         107 DAVTMFFS  114 (251)
T ss_dssp             EEEEECSS
T ss_pred             chHhhhhh
Confidence            98887543

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=86.65  E-value=1.1  Score=33.84  Aligned_cols=73  Identities=19%  Similarity=0.239  Sum_probs=54.5

Q ss_pred             EeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH--cCCccEEE
Q 044670            8 ITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---GEDVCYIHCDVTSEDEITNLVDTAVAK--YGKLDIMY   82 (302)
Q Consensus         8 VTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~--~~~id~lv   82 (302)
                      +|-|+||.-.++.+++ . +.+|+++++++...+...+.+   +.++.++..++++...       +...  .+++|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~-------~~~~~~~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-------LLKTLGIEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-------HHHHTTCSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH-------HHHHcCCCCcceee
Confidence            6788888888888776 2 568999999998877665543   5689999998877543       2233  24899999


Q ss_pred             EcccCCC
Q 044670           83 NNAGIVD   89 (302)
Q Consensus        83 ~~Ag~~~   89 (302)
                      ...|+.+
T Consensus       101 ~DlGvSs  107 (192)
T d1m6ya2         101 MDLGVST  107 (192)
T ss_dssp             EECSCCH
T ss_pred             eccchhH
Confidence            9988743

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.61  E-value=0.28  Score=39.20  Aligned_cols=37  Identities=19%  Similarity=0.275  Sum_probs=31.5

Q ss_pred             CCCEEEEeCCCChHHHHH-----HHHHHHcCCEEEEEecCcc
Q 044670            2 EGKVAIITGGASGIGAAA-----AKLFHENGAKVVIADVQDN   38 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~i-----a~~l~~~G~~V~~~~r~~~   38 (302)
                      .++.++|+.|-||.|+.+     +..|+++|++|.+++-+..
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            467888888899999876     7889999999999998865

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=86.37  E-value=1.2  Score=34.40  Aligned_cols=73  Identities=19%  Similarity=0.109  Sum_probs=51.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCcc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL--GEDVCYIHCDVTSEDEITNLVDTAVAKYGKLD   79 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   79 (302)
                      .|.+||-.|+++|-   ++..|++.+.+|+.+.++++..+...+.+  ..++.++..|..+.-          ...++.|
T Consensus        70 ~g~~VLdIG~GsGy---~ta~La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~----------~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGY---YTALIAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY----------EEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSH---HHHHHHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----------GGGCCEE
T ss_pred             ccceEEEecCCCCH---HHHHHHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcc----------hhhhhHH
Confidence            46789999998883   44456666789999998887766554443  257888888875310          1124789


Q ss_pred             EEEEcccC
Q 044670           80 IMYNNAGI   87 (302)
Q Consensus        80 ~lv~~Ag~   87 (302)
                      .++.+++.
T Consensus       137 ~Iiv~~a~  144 (224)
T d1vbfa_         137 RVVVWATA  144 (224)
T ss_dssp             EEEESSBB
T ss_pred             HHHhhcch
Confidence            99988874

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=86.14  E-value=1.1  Score=31.33  Aligned_cols=84  Identities=14%  Similarity=0.145  Sum_probs=52.8

Q ss_pred             CCCCEEEEeCCC---ChHHHHHHHHHHHcC-CEEEEEecCccHHHH-----HHHHhCCCeEEEEecCCCHHHHHHHHHHH
Q 044670            1 LEGKVAIITGGA---SGIGAAAAKLFHENG-AKVVIADVQDNLGQA-----LACKLGEDVCYIHCDVTSEDEITNLVDTA   71 (302)
Q Consensus         1 l~gk~vlVTGas---~gIG~~ia~~l~~~G-~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   71 (302)
                      ++-|+|.|.|||   +..|..+.+.|.+.| ++|+.+....+...-     -.++++..+..... +...+.+.++++++
T Consensus         6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi-~vp~~~~~~~~~~~   84 (129)
T d2csua1           6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII-VVPKRFVKDTLIQC   84 (129)
T ss_dssp             TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE-ecChHHhHHHHHHH
Confidence            367899999999   889999999987766 688887554332110     01112222222222 35688888899888


Q ss_pred             HHHcCCccEE-EEcccC
Q 044670           72 VAKYGKLDIM-YNNAGI   87 (302)
Q Consensus        72 ~~~~~~id~l-v~~Ag~   87 (302)
                      .+.  ++..+ +..+|+
T Consensus        85 ~~~--g~~~~vi~s~Gf   99 (129)
T d2csua1          85 GEK--GVKGVVIITAGF   99 (129)
T ss_dssp             HHH--TCCEEEECCCSS
T ss_pred             HHc--CCCEEEEecccc
Confidence            877  45544 444443

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=86.06  E-value=7.4  Score=31.44  Aligned_cols=141  Identities=11%  Similarity=0.085  Sum_probs=77.5

Q ss_pred             CCCEEEEe-CCCChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            2 EGKVAIIT-GGASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL------GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         2 ~gk~vlVT-Gas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      +|++||=. .++|+++.+    .+..|+ .|+.++.++...+...+..      ..+++++..|.-      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            47888855 556666644    345676 6999999888776555443      146788888752      33445555


Q ss_pred             HcCCccEEEEcccCCCCCCCCCCCCCHHHHHHHHHHHhhHHHHHHHHHHHhhccCCCCEEEEEcCcccccCCCCChhHHH
Q 044670           74 KYGKLDIMYNNAGIVDRGFASVLDTPKSDLDRVLAVNTTGGFLGAKHAARVMIPQHKGCILFTASACTEIAGIGSPAYTV  153 (302)
Q Consensus        74 ~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  153 (302)
                      +..+.|+||...-.+.......  ...          ......+++.+++.+.+  +| +++++|.+....         
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~~~--~~~----------~~~~~~L~~~a~~ll~p--gG-~l~~~scs~~~~---------  269 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKKEV--FSV----------SKDYHKLIRQGLEILSE--NG-LIIASTNAANMT---------  269 (317)
T ss_dssp             TTCCEEEEEECCCCC-----CC--CCH----------HHHHHHHHHHHHHTEEE--EE-EEEEEECCTTSC---------
T ss_pred             hcCCCCEEEEcChhhccchhHH--HHH----------HHHHHHHHHHHHHHcCC--CC-EEEEEeCCccCC---------
Confidence            5567999999865433210111  111          11223456677777743  34 555565533221         


Q ss_pred             HHHHHHHHHHHHHHHHCCCCcEEEEEe
Q 044670          154 SKYGIIALVKILAAELRQYGLRVNCVS  180 (302)
Q Consensus       154 sK~a~~~~~~~la~e~~~~gi~v~~v~  180 (302)
                          .+.|.+.+...+...+.++..+.
T Consensus       270 ----~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         270 ----VSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             ----HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             ----HHHHHHHHHHHHHHcCCeEEEec
Confidence                11333344444455677777664

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=85.79  E-value=0.22  Score=38.03  Aligned_cols=31  Identities=19%  Similarity=0.218  Sum_probs=26.7

Q ss_pred             CEEEEeCCCChHHH-----HHHHHHHHcCCEEEEEe
Q 044670            4 KVAIITGGASGIGA-----AAAKLFHENGAKVVIAD   34 (302)
Q Consensus         4 k~vlVTGas~gIG~-----~ia~~l~~~G~~V~~~~   34 (302)
                      |+++|||-..|.|+     .++..|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999889886     56788889999999875

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=85.77  E-value=3.8  Score=29.44  Aligned_cols=82  Identities=15%  Similarity=0.186  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEE-EEecC---CCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCY-IHCDV---TSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~Dl---~~~~~v~~~~~~~~~~~~~   77 (302)
                      +|+++.|.+.|||.|--++..+.+.|-++-  .-+++..+++.+.++..... -++|+   .+.+.+.++++.+.+. +.
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~--~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKLA--TLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-PN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEEC--CCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-TT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCccC--CCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-CC
Confidence            688999999999999999999999996653  33445555565555422111 13455   3567777777666553 56


Q ss_pred             ccEEEEccc
Q 044670           78 LDIMYNNAG   86 (302)
Q Consensus        78 id~lv~~Ag   86 (302)
                      +|.++....
T Consensus        79 vd~v~v~~~   87 (163)
T d2csua3          79 VDMLIAICV   87 (163)
T ss_dssp             CSEEEEEEE
T ss_pred             cCEEEEeec
Confidence            887765443

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=85.39  E-value=2.8  Score=30.90  Aligned_cols=72  Identities=19%  Similarity=0.248  Sum_probs=48.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C--CCeEEEEecCCCHHHHHHHHHHHHHHcC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G--EDVCYIHCDVTSEDEITNLVDTAVAKYG   76 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   76 (302)
                      .|.+||=.|+..|   .++..|++.+.+|+.++.++...+...+..   +  .+++++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            3667777777666   344556677889999999988776655433   2  57889888742          2222234


Q ss_pred             CccEEEEccc
Q 044670           77 KLDIMYNNAG   86 (302)
Q Consensus        77 ~id~lv~~Ag   86 (302)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            7899987654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.31  E-value=0.57  Score=37.63  Aligned_cols=33  Identities=27%  Similarity=0.361  Sum_probs=27.7

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~   36 (302)
                      .++|+|.|| |-=|+..|..|+++|++|++...+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            456888887 667899999999999999998654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.04  E-value=0.54  Score=32.33  Aligned_cols=35  Identities=17%  Similarity=0.274  Sum_probs=27.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHH---cCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~---~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.+|.++|..|.+   +|.+|.++.|.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            478889888 9999999977665   4567999887543

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.98  E-value=0.51  Score=35.62  Aligned_cols=38  Identities=16%  Similarity=0.233  Sum_probs=30.8

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHH
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALA   44 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~   44 (302)
                      +|.|.| .|.+|..+|..| ++|++|++.+.++++.+.+.
T Consensus         2 kI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~   39 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN   39 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence            466775 799999999766 57999999999888776654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=84.97  E-value=0.37  Score=38.14  Aligned_cols=32  Identities=22%  Similarity=0.356  Sum_probs=28.0

Q ss_pred             EEEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            5 VAIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         5 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      .|+|.|| |--|...|.+|+++|++|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788888 7789999999999999999998754

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=84.46  E-value=1.7  Score=32.51  Aligned_cols=72  Identities=17%  Similarity=0.177  Sum_probs=50.1

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh---C-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL---G-EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      ++.+||=.|++.|   ..+..|+++|++|+.++.++...+...+..   + ..+.+...|+.+..     .+      +.
T Consensus        30 ~~grvLDiGcG~G---~~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~   95 (198)
T d2i6ga1          30 APGRTLDLGCGNG---RNSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD------GE   95 (198)
T ss_dssp             CSCEEEEETCTTS---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC------CC
T ss_pred             CCCcEEEECCCCC---HHHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc------cc
Confidence            4567888888655   367788999999999999887766544332   2 35777778876543     11      26


Q ss_pred             ccEEEEcccC
Q 044670           78 LDIMYNNAGI   87 (302)
Q Consensus        78 id~lv~~Ag~   87 (302)
                      .|.++.+...
T Consensus        96 fD~I~~~~~~  105 (198)
T d2i6ga1          96 YDFILSTVVM  105 (198)
T ss_dssp             EEEEEEESCG
T ss_pred             ccEEEEeeee
Confidence            8988876653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=84.20  E-value=0.92  Score=30.96  Aligned_cols=35  Identities=31%  Similarity=0.365  Sum_probs=28.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHH---cCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHE---NGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~---~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.+|.++|..|.+   .|.+|.++.|.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478888887 8999999987665   4889999988654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.20  E-value=1.7  Score=33.35  Aligned_cols=75  Identities=20%  Similarity=0.147  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH---HhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC---KLG-EDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .|.+||..|+.+|--.++..+|+  |.+|+.+.++++..+...+   ..+ .++.++..|..+..          ...++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            46789999998887777777666  5679999998765554433   333 67899999875421          12247


Q ss_pred             ccEEEEcccCC
Q 044670           78 LDIMYNNAGIV   88 (302)
Q Consensus        78 id~lv~~Ag~~   88 (302)
                      .|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            99999888763

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=84.06  E-value=0.55  Score=34.15  Aligned_cols=26  Identities=23%  Similarity=0.469  Sum_probs=22.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCC
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGA   28 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~   28 (302)
                      |=+|.|.||||..|.++.+.|.++.+
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCC
Confidence            34789999999999999999998864

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.54  E-value=0.47  Score=34.15  Aligned_cols=33  Identities=15%  Similarity=0.276  Sum_probs=25.9

Q ss_pred             CEEEEeCCCChHHHHHHHHHHHcCC---EEEEEecC
Q 044670            4 KVAIITGGASGIGAAAAKLFHENGA---KVVIADVQ   36 (302)
Q Consensus         4 k~vlVTGas~gIG~~ia~~l~~~G~---~V~~~~r~   36 (302)
                      .+|.|.||||..|..+++.|.++++   ++..+..+
T Consensus         3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            4689999999999999999987653   46555443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=83.25  E-value=0.66  Score=36.20  Aligned_cols=71  Identities=8%  Similarity=-0.022  Sum_probs=52.8

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHH---HhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALAC---KLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      ++++||=.|++.|   .++..|+++|.+|+.++.+++.++...+   ..+.++.++.+|+.+.+.           .++.
T Consensus        37 ~~~~vLDiGCG~G---~~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~~-----------~~~f  102 (246)
T d1y8ca_          37 VFDDYLDLACGTG---NLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNI-----------NRKF  102 (246)
T ss_dssp             CTTEEEEETCTTS---TTHHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCC-----------SCCE
T ss_pred             CCCeEEEEeCcCC---HHHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhcc-----------cccc
Confidence            4678999999888   4788889999999999999887655433   335578899888865421           1378


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      |+++...+
T Consensus       103 D~i~~~~~  110 (246)
T d1y8ca_         103 DLITCCLD  110 (246)
T ss_dssp             EEEEECTT
T ss_pred             cccceeee
Confidence            98887544

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.77  E-value=0.99  Score=31.86  Aligned_cols=35  Identities=23%  Similarity=0.222  Sum_probs=28.4

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHH----cCCEEEEEecCcc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHE----NGAKVVIADVQDN   38 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~----~G~~V~~~~r~~~   38 (302)
                      .|+++|.|| |.+|.++|..|++    .|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            578888877 9999999998864    5899999877554

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.63  E-value=1.5  Score=33.53  Aligned_cols=76  Identities=17%  Similarity=0.279  Sum_probs=50.0

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHh----CCCeEEEEecCCCHHHHHHHHHHHHHHcCC
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKL----GEDVCYIHCDVTSEDEITNLVDTAVAKYGK   77 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   77 (302)
                      .|.+||-.|+.+|--..+..++...+.+|+.++.+++..+...+.+    -.++.++..|..+.-          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            4678998988777555555555555678999999887666554433    246677777754311          11236


Q ss_pred             ccEEEEcccC
Q 044670           78 LDIMYNNAGI   87 (302)
Q Consensus        78 id~lv~~Ag~   87 (302)
                      .|.++.+++.
T Consensus       145 fD~I~~~~~~  154 (213)
T d1dl5a1         145 YDVIFVTVGV  154 (213)
T ss_dssp             EEEEEECSBB
T ss_pred             hhhhhhhccH
Confidence            8999988875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=82.55  E-value=0.7  Score=35.85  Aligned_cols=34  Identities=38%  Similarity=0.524  Sum_probs=28.1

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHH
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQDNLG   40 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~   40 (302)
                      |+|.|| |--|..+|..|+++|++|+++.++....
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g   38 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLG   38 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence            567776 5778899999999999999999876543

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.34  E-value=4.2  Score=26.20  Aligned_cols=69  Identities=20%  Similarity=0.206  Sum_probs=46.1

Q ss_pred             CEEEEeCCCChHHH-HHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            4 KVAIITGGASGIGA-AAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         4 k~vlVTGas~gIG~-~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +++-+.|- +|+|- ++|+.|.++|+.|...++........++..+..+. ..-|..+.              ...|.||
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~-~gh~~~~i--------------~~~d~vV   65 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIF-VPHSADNW--------------YDPDLVI   65 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEE-SSCCTTSC--------------CCCSEEE
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEE-eeeccccc--------------CCCCEEE
Confidence            35556644 66675 78999999999999999987666555666554332 11222221              2689999


Q ss_pred             EcccCC
Q 044670           83 NNAGIV   88 (302)
Q Consensus        83 ~~Ag~~   88 (302)
                      ...++.
T Consensus        66 ~SsAI~   71 (89)
T d1j6ua1          66 KTPAVR   71 (89)
T ss_dssp             ECTTCC
T ss_pred             EecCcC
Confidence            988864

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.22  E-value=1.1  Score=35.21  Aligned_cols=34  Identities=38%  Similarity=0.485  Sum_probs=28.5

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHc-CCEEEEEec
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHEN-GAKVVIADV   35 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~-G~~V~~~~r   35 (302)
                      ++||+++|-|- |-+|.++++.|+++ |++|+.+.-
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD   64 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSD   64 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccc
Confidence            57899999987 77999999999864 899887643

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=82.03  E-value=4.5  Score=27.54  Aligned_cols=82  Identities=11%  Similarity=0.024  Sum_probs=55.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCC--CHHHHHHHHHHHHHHcCCc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVT--SEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~~~~i   78 (302)
                      |+..+|||.-=...+...+...|...|++|..+. +.+.+.+...+  .....+.+|+.  +.+. -++++++.+..+.+
T Consensus         1 M~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~-~~~~al~~~~~--~~~dlvi~D~~mp~~~G-~e~~~~lr~~~~~~   76 (123)
T d1dbwa_           1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQ-SAEAFLAFAPD--VRNGVLVTDLRMPDMSG-VELLRNLGDLKINI   76 (123)
T ss_dssp             CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHGGG--CCSEEEEEECCSTTSCH-HHHHHHHHHTTCCC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHHHhh--cCCcEEEEeccCccccc-hHHHHHHHhcCCCC
Confidence            6777899999899999999999999999987654 33333233222  34556666665  4433 45677777766666


Q ss_pred             cEEEEccc
Q 044670           79 DIMYNNAG   86 (302)
Q Consensus        79 d~lv~~Ag   86 (302)
                      -+++..+-
T Consensus        77 ~iI~lt~~   84 (123)
T d1dbwa_          77 PSIVITGH   84 (123)
T ss_dssp             CEEEEECT
T ss_pred             eEEEEEee
Confidence            67766543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=81.84  E-value=3.5  Score=33.47  Aligned_cols=32  Identities=28%  Similarity=0.246  Sum_probs=22.9

Q ss_pred             CEEEEeCCCCh-H--HHHHHHHHHHcCCEEEEEec
Q 044670            4 KVAIITGGASG-I--GAAAAKLFHENGAKVVIADV   35 (302)
Q Consensus         4 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r   35 (302)
                      |.++.++||+| |  -.+++++|.++||+|++++.
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            34455677743 2  24589999999999998874

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.61  E-value=2.5  Score=28.92  Aligned_cols=82  Identities=12%  Similarity=0.120  Sum_probs=55.2

Q ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHH-HHHHHHHHHHHHcCCcc
Q 044670            1 LEGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSED-EITNLVDTAVAKYGKLD   79 (302)
Q Consensus         1 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~v~~~~~~~~~~~~~id   79 (302)
                      |+..+|||.-=...+...+.+.|...|++|..+....+..+.+. .  ..+..+-+|+.=++ +--++++++.+.++.+-
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l~-~--~~~dlii~D~~mp~~~G~el~~~l~~~~~~~p   77 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALA-S--KTPDVLLSDIRMPGMDGLALLKQIKQRHPMLP   77 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHHT-T--CCCSEEEECCSSSSSTTHHHHHHHHHHSSSCC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHH-h--CCCCEEEehhhcCCchHHHHHHHHHHhCCCCe
Confidence            55668999999999999999999999999987665444443332 2  34455666654321 22345777777776666


Q ss_pred             EEEEcc
Q 044670           80 IMYNNA   85 (302)
Q Consensus        80 ~lv~~A   85 (302)
                      +++..+
T Consensus        78 iI~~t~   83 (123)
T d1krwa_          78 VIIMTA   83 (123)
T ss_dssp             EEESCC
T ss_pred             EEEEec
Confidence            666544

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.44  E-value=0.63  Score=35.77  Aligned_cols=34  Identities=26%  Similarity=0.484  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCChHHH-----HHHHHHHHcCCEEEEEecC
Q 044670            3 GKVAIITGGASGIGA-----AAAKLFHENGAKVVIADVQ   36 (302)
Q Consensus         3 gk~vlVTGas~gIG~-----~ia~~l~~~G~~V~~~~r~   36 (302)
                      ||+|.|+|+-||.|+     +++..|++.|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999886     5677888999999999854

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=81.41  E-value=5.9  Score=26.72  Aligned_cols=81  Identities=14%  Similarity=0.178  Sum_probs=54.2

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMY   82 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv   82 (302)
                      +|+|||.-=...+-..+.+.|...|++|..+....+..+.+ ......+.+....+-+.+. -++++++.+....+-+++
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~-~~~~~dlillD~~mP~~~G-~el~~~lr~~~~~~pvi~   78 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIV-TKERPDLVLLDMKIPGMDG-IEILKRMKVIDENIRVII   78 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHH-HHHCCSEEEEESCCTTCCH-HHHHHHHHHHCTTCEEEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHH-HhCCCCEEEEeccCCCCCH-HHHHHHHHHhCCCCcEEE
Confidence            58899999999999999999999999998766444444433 3333444444333334443 356777777766666666


Q ss_pred             Ecc
Q 044670           83 NNA   85 (302)
Q Consensus        83 ~~A   85 (302)
                      ..+
T Consensus        79 lt~   81 (119)
T d1peya_          79 MTA   81 (119)
T ss_dssp             EES
T ss_pred             Eec
Confidence            654

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=81.40  E-value=0.76  Score=37.01  Aligned_cols=31  Identities=29%  Similarity=0.530  Sum_probs=27.0

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      |+|.|| |..|...|..|+++|++|+++.+..
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            677776 8889999999999999999998754

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=81.36  E-value=1.2  Score=33.24  Aligned_cols=73  Identities=11%  Similarity=0.082  Sum_probs=49.7

Q ss_pred             CCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCccEEEEcccCCC
Q 044670           11 GASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVTSEDEITNLVDTAVAKYGKLDIMYNNAGIVD   89 (302)
Q Consensus        11 as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~lv~~Ag~~~   89 (302)
                      ||-|-|-| .+.+++++.+|++++|++............++.++..++++.+..   +...  ..+++|.++..-|+.+
T Consensus        25 ~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~DLGvSs   97 (182)
T d1wg8a2          25 ATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRH---LAAL--GVERVDGILADLGVSS   97 (182)
T ss_dssp             TTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEECSCCH
T ss_pred             eCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHH---HHHc--CCCccCEEEEEccCCH
Confidence            44444445 455566678999999999887665554556889999888875442   2221  1347999999998754

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=81.28  E-value=1.1  Score=32.38  Aligned_cols=34  Identities=18%  Similarity=0.172  Sum_probs=26.9

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEecCc
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAK-VVIADVQD   37 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~-V~~~~r~~   37 (302)
                      +++|+|.|| |..|..+|..+.+.|++ |+++.|.+
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            456778765 88999999999999976 66777653

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=81.17  E-value=3.7  Score=32.19  Aligned_cols=70  Identities=17%  Similarity=0.274  Sum_probs=48.2

Q ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHH---hCCCeEEEEecCCCHHHHHHHHHHHHHHcCCc
Q 044670            2 EGKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACK---LGEDVCYIHCDVTSEDEITNLVDTAVAKYGKL   78 (302)
Q Consensus         2 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   78 (302)
                      .|++||=.|+.+|+   ++..+++.|++|+.++.++...+...+.   .+....++..|+.+      .+     ..++.
T Consensus       120 ~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~~f  185 (254)
T d2nxca1         120 PGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFGPF  185 (254)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGCCE
T ss_pred             ccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----ccccc
Confidence            57899989988885   3345677899999999999877655443   34556777766421      11     12478


Q ss_pred             cEEEEcc
Q 044670           79 DIMYNNA   85 (302)
Q Consensus        79 d~lv~~A   85 (302)
                      |.++.|.
T Consensus       186 D~V~ani  192 (254)
T d2nxca1         186 DLLVANL  192 (254)
T ss_dssp             EEEEEEC
T ss_pred             chhhhcc
Confidence            9998763

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.82  E-value=0.85  Score=36.90  Aligned_cols=31  Identities=42%  Similarity=0.746  Sum_probs=26.2

Q ss_pred             EEEeCCCChHHHHHHHHHHHcCCEEEEEecCc
Q 044670            6 AIITGGASGIGAAAAKLFHENGAKVVIADVQD   37 (302)
Q Consensus         6 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~   37 (302)
                      |+|.|| |--|...|..|+++|++|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            577777 6779999999999999999997644

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.52  E-value=4.6  Score=30.50  Aligned_cols=83  Identities=10%  Similarity=0.028  Sum_probs=52.6

Q ss_pred             CCEEEEeCCCChHHHH-HHHH---HHHc-----CCEEEEEecCccHHHHHHH-----------------HhCCCeEEEEe
Q 044670            3 GKVAIITGGASGIGAA-AAKL---FHEN-----GAKVVIADVQDNLGQALAC-----------------KLGEDVCYIHC   56 (302)
Q Consensus         3 gk~vlVTGas~gIG~~-ia~~---l~~~-----G~~V~~~~r~~~~~~~~~~-----------------~~~~~~~~~~~   56 (302)
                      .-+++|.||||.+.+- +.-+   |...     +.+++.++|++-..++..+                 .+-.++.++.+
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~   99 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG   99 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence            3468899999998753 2222   2333     3578999986533222221                 22267899999


Q ss_pred             cCCCHHHHHHHHHHHHHHcC--CccEEEEcc
Q 044670           57 DVTSEDEITNLVDTAVAKYG--KLDIMYNNA   85 (302)
Q Consensus        57 Dl~~~~~v~~~~~~~~~~~~--~id~lv~~A   85 (302)
                      |++++++..++.+.+.+...  ..+.++..|
T Consensus       100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1         100 QYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             cCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999998888776655321  234566655

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=80.34  E-value=3.6  Score=29.26  Aligned_cols=72  Identities=8%  Similarity=0.211  Sum_probs=45.8

Q ss_pred             CCCCEEEEeCC-CChHHHHHHHHHHHcCC-EEEEEecCccHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHHH
Q 044670            1 LEGKVAIITGG-ASGIGAAAAKLFHENGA-KVVIADVQDNLGQALACKL-----GEDVCYIHCDVTSEDEITNLVDTAVA   73 (302)
Q Consensus         1 l~gk~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~~~   73 (302)
                      ++|+++|=.|+ ||.+|.+    .+.+|+ +|+.++.+++..+.+.+..     ..++.++..|..+      ++   ..
T Consensus        13 ~~g~~vlDl~~GtG~~~ie----a~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~~   79 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAIE----AVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---DC   79 (152)
T ss_dssp             CCSCEEEEETCTTCHHHHH----HHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---HH
T ss_pred             CCCCeEEEcCCccCHHHHH----HHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---cc
Confidence            36888885544 5656654    355675 7999999888766554433     2568888887422      22   22


Q ss_pred             HcCCccEEEEcc
Q 044670           74 KYGKLDIMYNNA   85 (302)
Q Consensus        74 ~~~~id~lv~~A   85 (302)
                      ...+.|+++.+.
T Consensus        80 ~~~~fDiIf~DP   91 (152)
T d2esra1          80 LTGRFDLVFLDP   91 (152)
T ss_dssp             BCSCEEEEEECC
T ss_pred             cccccceeEech
Confidence            235789988754

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=80.13  E-value=2.2  Score=29.07  Aligned_cols=81  Identities=9%  Similarity=-0.002  Sum_probs=53.5

Q ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEecCccHHHHHHHHhCCCeEEEEecCC--CHHHHHHHHHHHHHHcCCccE
Q 044670            3 GKVAIITGGASGIGAAAAKLFHENGAKVVIADVQDNLGQALACKLGEDVCYIHCDVT--SEDEITNLVDTAVAKYGKLDI   80 (302)
Q Consensus         3 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~--~~~~v~~~~~~~~~~~~~id~   80 (302)
                      ..+|||.--...+...+...|.+.|++|..+....+..+.+.+...  ...+-+|+.  +.+. -++++++++....+-+
T Consensus         2 p~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~--~dliilD~~lp~~~G-~el~~~ir~~~~~~pi   78 (118)
T d2b4aa1           2 PFRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLST--CDLLIVSDQLVDLSI-FSLLDIVKEQTKQPSV   78 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGS--CSEEEEETTCTTSCH-HHHHHHHTTSSSCCEE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHHHHHHHHHhcCC--CCEEEEeCCCCCCCH-HHHHHHHHhcCCCCcE
Confidence            3578888888999999999999999999987644444443333222  344555554  4433 4667777766556666


Q ss_pred             EEEccc
Q 044670           81 MYNNAG   86 (302)
Q Consensus        81 lv~~Ag   86 (302)
                      ++..+.
T Consensus        79 i~lt~~   84 (118)
T d2b4aa1          79 LILTTG   84 (118)
T ss_dssp             EEEESC
T ss_pred             EEEECC
Confidence            776553