Query 044677
Match_columns 250
No_of_seqs 117 out of 201
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 09:32:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x3v_A Syndapin I, protein kin 92.7 5 0.00017 35.5 19.5 57 175-232 185-241 (337)
2 2efk_A CDC42-interacting prote 92.0 5.5 0.00019 34.4 21.8 50 175-224 167-216 (301)
3 3haj_A Human pacsin2 F-BAR; pa 92.0 8.2 0.00028 36.4 20.6 60 175-235 187-246 (486)
4 2efl_A Formin-binding protein 91.7 5.9 0.0002 34.1 24.1 171 43-230 37-229 (305)
5 2fic_A Bridging integrator 1; 89.0 9.7 0.00033 32.2 21.8 34 206-239 212-245 (251)
6 4a3a_A Amphiphysin; structural 87.5 13 0.00044 32.0 19.2 79 28-120 53-132 (243)
7 2q12_A DIP13 alpha, DCC-intera 85.4 17 0.00057 31.1 23.4 92 134-233 126-218 (265)
8 4h8s_A DCC-interacting protein 85.2 22 0.00075 32.3 20.9 23 135-157 150-172 (407)
9 3i2w_A Syndapin, LD46328P; EFC 83.6 20 0.0007 30.7 13.6 176 43-235 31-231 (290)
10 3aco_A Pacsin2, protein kinase 83.5 24 0.00081 31.4 18.7 58 175-233 194-251 (350)
11 4dyl_A Tyrosine-protein kinase 81.5 32 0.0011 31.5 19.5 168 43-224 35-215 (406)
12 3abh_A Pacsin2, protein kinase 78.9 32 0.0011 29.8 16.5 51 182-233 201-251 (312)
13 1uru_A Amphiphysin; endocytosi 64.8 58 0.002 26.8 21.1 61 175-242 175-235 (244)
14 3m3w_A Pacsin3, protein kinase 49.4 1.3E+02 0.0046 26.2 16.7 46 185-231 195-240 (320)
15 2q13_A DCC-interacting protein 47.9 1.5E+02 0.0052 26.4 22.3 24 134-157 126-149 (385)
16 2z0v_A SH3-containing GRB2-lik 39.8 1.7E+02 0.0057 24.5 15.0 36 205-241 190-225 (240)
17 3hls_A Guanylate cyclase solub 33.1 38 0.0013 23.4 3.3 38 117-154 9-46 (66)
18 2kvc_A Putative uncharacterize 30.6 52 0.0018 25.0 3.9 50 51-116 5-54 (103)
19 2lky_A Uncharacterized protein 30.2 52 0.0018 25.4 3.9 49 52-116 8-56 (112)
20 1yke_B RNA polymerase II holoe 29.9 1.6E+02 0.0054 23.5 6.9 19 29-47 5-23 (151)
21 1no1_A G39P, replisome organiz 28.7 1.1E+02 0.0036 24.0 5.5 30 87-116 26-55 (126)
22 1zww_A SH3-containing GRB2-lik 27.3 2.8E+02 0.0095 23.3 14.1 33 208-241 209-241 (256)
23 2v0o_A FCHO2, FCH domain only 26.3 2.8E+02 0.0094 22.9 23.4 44 181-225 164-207 (276)
24 2v66_B Nuclear distribution pr 23.1 2.5E+02 0.0086 21.4 8.5 66 89-155 17-86 (111)
25 3mq9_A Bone marrow stromal ant 22.7 4.2E+02 0.015 23.9 11.9 50 105-154 370-419 (471)
26 3ok8_A Brain-specific angiogen 22.4 3.6E+02 0.012 22.9 18.9 40 24-63 10-49 (222)
27 2v0o_A FCHO2, FCH domain only 22.1 3.3E+02 0.011 22.4 17.8 62 181-242 185-246 (276)
28 3ol3_A Putative uncharacterize 21.1 1.4E+02 0.0048 22.7 4.8 48 52-115 11-58 (107)
No 1
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=92.73 E-value=5 Score=35.52 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHH
Q 044677 175 VTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGM 232 (250)
Q Consensus 175 ~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ 232 (250)
+...+..++.++.+++.-...|..+|..+... -..+..-+|.+|+.|..+=..-+..
T Consensus 185 ~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~-~~~~~~~~~~~~~~~Q~le~~Rl~~ 241 (337)
T 2x3v_A 185 QKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKT-TPQYMEGMEQVFEQCQQFEEKRLVF 241 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445567777777888888999999988877 6778888999998776554443333
No 2
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=92.04 E-value=5.5 Score=34.37 Aligned_cols=50 Identities=16% Similarity=0.274 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHH
Q 044677 175 VTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSE 224 (250)
Q Consensus 175 ~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~ 224 (250)
+...+..++.....++.-...|..++..++..--.-...-+|.+|+.|..
T Consensus 167 ~eK~~~k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~p~~~~~lQ~ 216 (301)
T 2efk_A 167 VEKAKQQAHLRSHMAEESKNEYAAQLQRFNRDQAHFYFSQMPQIFDKLQD 216 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345556666666777778888888877665445566777887775543
No 3
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=92.03 E-value=8.2 Score=36.37 Aligned_cols=60 Identities=8% Similarity=0.237 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 044677 175 VTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMYRD 235 (250)
Q Consensus 175 ~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~ 235 (250)
+...+..++..+..++.-...|..++..+.... .-...-+|.+|+.|..+-...+....+
T Consensus 187 ~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~-~~y~~~~~~~~~~lQ~lEeeRi~~lK~ 246 (486)
T 3haj_A 187 LKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGT-PQYMENMEQVFEQCQQFEEKRLRFFRE 246 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556777777778888899999999998775 668899999999887776666665543
No 4
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=91.73 E-value=5.9 Score=34.10 Aligned_cols=171 Identities=11% Similarity=0.130 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHHHHH----
Q 044677 43 FCKLIDHQKAYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAALIN---- 118 (250)
Q Consensus 43 F~~wi~~Qk~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~~v~---- 118 (250)
|..=...-++|.+.|..|-++.. +.... +...|..+.+...|...++.+ +.+...-..|+..+.
T Consensus 37 ~~eRa~iE~eYak~L~kLa~~~~-~~~~~---------~~~~~~~~t~~~aw~~~~~~~--e~~a~~h~~~a~~l~~~v~ 104 (305)
T 2efl_A 37 VKERTEIELSYAKQLRNLSKKYQ-PKKNS---------KEEEEYKYTSCKAFISNLNEM--NDYAGQHEVISENMASQII 104 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTS-CC----------------CTTSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-ccccc---------CccccccccHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 44556678899999999988753 11000 001244667888998777653 333333344444432
Q ss_pred ----HHHHhhHHHHHHHHHH----HHHHHHHHHHhHHHHHHHHHhhhhcc----------ccccccccccccchHHHHHH
Q 044677 119 ----TIMHHQEEEMKLKERC----EETKKELSRKTRQFEDWYNKYITRRT----------QEELDADDTTLKDAVTERKF 180 (250)
Q Consensus 119 ----~i~~~Q~eE~~~k~k~----e~~~Kelekk~~~l~~~~~k~~~~~~----------~~~~~~~~~~~~~~~~ekk~ 180 (250)
.+...+.. .++++ ..+.|++.+....++..-.+|...-. -...+ .......+...+.
T Consensus 105 ~~l~~~~~~~~~---~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~e~e~a~~~~~~~~~~--~~~s~~~~eK~~~ 179 (305)
T 2efl_A 105 VDLARYVQELKQ---ERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRAQQYFEKMDAD--INVTKADVEKARQ 179 (305)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--TTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccHhHHHHHHH
Confidence 22221111 11211 12233333333333322222221100 00000 0011112333344
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHH
Q 044677 181 VVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACS 230 (250)
Q Consensus 181 ~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~ 230 (250)
.++....+++.-...|..+|..+...--.....-+|.+|+.|..+=...+
T Consensus 180 k~~~~~~~~~~a~~~Y~~~v~~~n~~~~~~~~~~~~~~~~~lQ~le~~r~ 229 (305)
T 2efl_A 180 QAQIRHQMAEDSKADYSSILQKFNHEQHEYYHTHIPNIFQKIQEMEERRI 229 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555566777778898888887765456677888888876554443333
No 5
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=88.96 E-value=9.7 Score=32.21 Aligned_cols=34 Identities=9% Similarity=0.115 Sum_probs=21.3
Q ss_pred hcHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHH
Q 044677 206 KSLTSLRNHLPELFKAMSEISFACSGMYRDLKNI 239 (250)
Q Consensus 206 ~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~l~~~ 239 (250)
.....+...|..++.+-..|...+.+.|++|...
T Consensus 212 ~~~~~~~~~l~~f~~~Q~~f~~~~~~~~~~L~~~ 245 (251)
T 2fic_A 212 SRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDV 245 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455666666666667777777777776544
No 6
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=87.53 E-value=13 Score=31.97 Aligned_cols=79 Identities=14% Similarity=0.130 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHH-HHHHhccCChHHH
Q 044677 28 RTIQLWAVVQEWNSQFCKLIDHQKAYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLA-WHDLLQKLPDEIA 106 (250)
Q Consensus 28 at~qLe~el~~W~~sF~~wi~~Qk~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~-W~~~ld~lp~k~v 106 (250)
.+..|..++..|..+......+|....+++.+ .+.|... +..+.|.+...|.. |.+--++|++ .|
T Consensus 53 ~~~kL~k~~k~y~~ai~~~~~~q~~~ae~l~~----ly~p~~~---------~~~~~~~~~~~~~~l~~d~~~~l~d-~~ 118 (243)
T 4a3a_A 53 EGTRLQRELRGYLAAIKGMQEASMKLTESLHE----VYEPDWY---------GREDVKMVGEKCDVLWEDFHQKLVD-GS 118 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCTTST---------THHHHHHHHHHHHHHHHHHHHHHHH-TH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HcCcccc---------CccchHHHHHHHHHHHHHHHHHHHH-HH
Confidence 35556666667777777777777777776655 1224211 11112345556654 7776666654 34
Q ss_pred HHHHHHHHHHHHHH
Q 044677 107 RSAIGNFAALINTI 120 (250)
Q Consensus 107 ~~AIk~f~~~v~~i 120 (250)
+.-|..|.+.+-.+
T Consensus 119 l~Pl~~l~~~f~~i 132 (243)
T 4a3a_A 119 LLTLDTYLGQFPDI 132 (243)
T ss_dssp HHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHChHH
Confidence 45566665555444
No 7
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=85.35 E-value=17 Score=31.10 Aligned_cols=92 Identities=13% Similarity=0.012 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhhhcccccccccccccc-chHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhh
Q 044677 134 CEETKKELSRKTRQFEDWYNKYITRRTQEELDADDTTLK-DAVTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLR 212 (250)
Q Consensus 134 ~e~~~Kelekk~~~l~~~~~k~~~~~~~~~~~~~~~~~~-~~~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq 212 (250)
+..+.|.|++....++....||..-... .+. ..+.|-...|...|+.-+...-.|.-.+..++..---.+=
T Consensus 126 ~ke~kk~fdk~~~~yd~al~k~~~~~k~--------k~~e~~l~Ea~~~l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~l 197 (265)
T 2q12_A 126 ILTLKEVFQIASNDHDAAINRYSRLSKK--------RENDKVKYEVTEDVYTSRKKQHQTMMHYFCALNTLQYKKKIALL 197 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCC--------CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888888888777776533210 011 1123444556666665555444444333333321111122
Q ss_pred hchHHHHHHHHHHHHHHHHHH
Q 044677 213 NHLPELFKAMSEISFACSGMY 233 (250)
Q Consensus 213 ~gL~~vF~aL~~Fs~~s~~~y 233 (250)
..|-..+++...|-..+.+++
T Consensus 198 e~l~~~~~a~~~ff~~g~e~~ 218 (265)
T 2q12_A 198 EPLLGYMQAQISFFKMGSENL 218 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 223334444444444444444
No 8
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=85.17 E-value=22 Score=32.31 Aligned_cols=23 Identities=13% Similarity=0.101 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhHHHHHHHHHhhh
Q 044677 135 EETKKELSRKTRQFEDWYNKYIT 157 (250)
Q Consensus 135 e~~~Kelekk~~~l~~~~~k~~~ 157 (250)
..+.|.||+..+.++.+..||..
T Consensus 150 ke~kK~Fek~~~~Yd~~l~Ky~~ 172 (407)
T 4h8s_A 150 STLKDLFGLASNEHDLSMAKYSR 172 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677788888888887777754
No 9
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=83.63 E-value=20 Score=30.74 Aligned_cols=176 Identities=16% Similarity=0.202 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHH
Q 044677 43 FCKLIDHQKAYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAALINTIMH 122 (250)
Q Consensus 43 F~~wi~~Qk~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~~v~~i~~ 122 (250)
|..=...-++|.+.|..|-+++...... .|+...++..|...+.. .+.+...-..|+..|..-+.
T Consensus 31 ~keRa~iE~~Yak~L~kL~~~~~~~~~~-------------~~~~gs~~~aw~~~~~~--~e~~a~~h~~~a~~l~~~v~ 95 (290)
T 3i2w_A 31 IQERADIEKGYAKSLRTWSKKWGELIEK-------------GPEYGTTEAAWKGVLTE--SERISDVHMKIKDNLCNDVN 95 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------SSCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC-------------CCCCchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 3444567899999999999875311100 12335678889777653 23344455555555533221
Q ss_pred hhHH----HH--------HHHHHH----HHHHHHHHHHhHHHHHHHHHhhhhccccccccc---cccccc-hHHHH----
Q 044677 123 HQEE----EM--------KLKERC----EETKKELSRKTRQFEDWYNKYITRRTQEELDAD---DTTLKD-AVTER---- 178 (250)
Q Consensus 123 ~Q~e----E~--------~~k~k~----e~~~Kelekk~~~l~~~~~k~~~~~~~~~~~~~---~~~~~~-~~~ek---- 178 (250)
..-. +. +.+++. ..+.+++......++..-.+|...-. +...+. .....+ .+..|
T Consensus 96 ~~l~~~~~e~~~k~~~~~kerK~~~~~~~k~~k~~~~~~~~l~kaKk~Y~~~c~-e~~~a~~~~~~a~~~~~~s~k~~~K 174 (290)
T 3i2w_A 96 SQIKTWQKENYHHTLMQIKERKDLEDLFKKAQKPWAKLLAKVEKAKADYHSACK-TERSATNQERNANADSSLSPDQVKK 174 (290)
T ss_dssp HHHHHHHHHHCCEETTEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTTSCC-------------------
T ss_pred HHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcCCCCCCHHHHHH
Confidence 1111 11 112222 23344444444555544444432210 000000 000000 01111
Q ss_pred -HHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHHHH
Q 044677 179 -KFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMYRD 235 (250)
Q Consensus 179 -k~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~ 235 (250)
+..++.....++.-...|..++..+...... ....+|.+|+.|-++=...+....+
T Consensus 175 ~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~~~-~~~~~p~~~~~~Q~lee~Ri~~lk~ 231 (290)
T 3i2w_A 175 MHDRVQKTKDQVQKCREKYEQAIAEITKYNSV-YIEDMTSVFEKCQTFEKTRLQFFKE 231 (290)
T ss_dssp -CTTSSTTTTHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123333445677788899999998888665 8999999998776666555555554
No 10
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=83.47 E-value=24 Score=31.36 Aligned_cols=58 Identities=7% Similarity=0.202 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHH
Q 044677 175 VTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMY 233 (250)
Q Consensus 175 ~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~y 233 (250)
+..-+..++.++..++.-...|..+|..+.... ..+..-+|.+|+.|..+=..-+...
T Consensus 194 ~eK~~~k~~k~~~~~~~a~~~Y~~~v~~~n~~~-~~~~~~~~~~~~~~Q~lee~Rl~~l 251 (350)
T 3aco_A 194 LKKLQDKIEKCKQDVLKTKEKYEKSLKELDQGT-PQYMENMEQVFEQCQQFEEKRLRFF 251 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333455667777777788889999999888764 5677889999887766655444443
No 11
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=81.46 E-value=32 Score=31.50 Aligned_cols=168 Identities=12% Similarity=0.133 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHH--
Q 044677 43 FCKLIDHQKAYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAALINTI-- 120 (250)
Q Consensus 43 F~~wi~~Qk~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~~v~~i-- 120 (250)
|..=...-++|-+.|..|-++...-.. + +..++..++..|...+..+ +.+......|+..+..-
T Consensus 35 ~reRA~IE~eYAk~L~kLakk~~~k~~--------~----~~~~~~tl~~aW~~ll~et--e~~a~~H~~lae~L~~~v~ 100 (406)
T 4dyl_A 35 MAQRVKSDREYAGLLHHMSLQDSGGQS--------R----AISPDSPISQSWAEITSQT--EGLSRLLRQHAEDLNSGPL 100 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHC------------------------CCSHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccc--------c----CCCCCChHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 344457789999999999887431000 0 0112335668887776643 33333333333332221
Q ss_pred ---HHhhHHHHHHHHHHH----HHHHHHHHHh-HHHHHHHHHhhhhcc-ccc-c-ccccccccchHHHHHHHHHHHHHhh
Q 044677 121 ---MHHQEEEMKLKERCE----ETKKELSRKT-RQFEDWYNKYITRRT-QEE-L-DADDTTLKDAVTERKFVVDVLKKRL 189 (250)
Q Consensus 121 ---~~~Q~eE~~~k~k~e----~~~Kelekk~-~~l~~~~~k~~~~~~-~~~-~-~~~~~~~~~~~~ekk~~le~~rkrl 189 (250)
-.-..+-.+.+++++ .+.+++.+.+ ..++..-.+|...-. .+. . ..........+..-+..++.....+
T Consensus 101 ~~l~~~~ke~~~~rK~~~~~~~klqk~~~k~~~~~lekaKk~Y~~~cke~e~A~~k~~~~~k~ke~eK~~~k~~k~~~~~ 180 (406)
T 4dyl_A 101 SKLSLLIRERQQLRKTYSEQWQQLQQELTKTHSQDIEKLKSQYRALARDSAQAKRKYQEASKDKDRDKAKDKYVRSLWKL 180 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCC---------CHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHH
Confidence 111111122333332 2444444444 444433333322100 000 0 0000000011233344555555666
Q ss_pred HHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHH
Q 044677 190 EEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSE 224 (250)
Q Consensus 190 e~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~ 224 (250)
+.-+..|..++..++...-.-....||.||+.+-.
T Consensus 181 ~~a~neY~~~l~~~N~~~~~yy~~~lp~~~d~lQ~ 215 (406)
T 4dyl_A 181 FAHHNRYVLGVRAAQLHHQHHHQLLLPGLLRSLQD 215 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 77777898888887766666677889999886444
No 12
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=78.87 E-value=32 Score=29.84 Aligned_cols=51 Identities=8% Similarity=0.255 Sum_probs=32.7
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHH
Q 044677 182 VDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMY 233 (250)
Q Consensus 182 le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~y 233 (250)
++.++..++.-...|..+|..+.... .....-+|.+|+.|..+=..-+...
T Consensus 201 ~~k~~~~~~~a~~~Y~~~v~~~n~~~-~~~~~~~~~~~~~~Q~lee~Rl~~l 251 (312)
T 3abh_A 201 IEKCKQDVLKTKEKYEKSLKELDQGT-PQYMENMEQVFEQCQQFEEKRLRFF 251 (312)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455666777888888887654 4467788888887665554444333
No 13
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=64.79 E-value=58 Score=26.84 Aligned_cols=61 Identities=20% Similarity=0.323 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044677 175 VTERKFVVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMYRDLKNIAQH 242 (250)
Q Consensus 175 ~~ekk~~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~l~~~~~~ 242 (250)
+.+=+...+.+...|.+|.... .+.....+...|..++.+-..|...+.+.|+.|...-..
T Consensus 175 l~~ak~~ye~ln~~L~~eLp~l-------~~~~~~~~~~~l~~fv~~q~~~~~~~~~~~~~l~~~~~~ 235 (244)
T 1uru_A 175 LEEARRTYEILNTELHDELPAL-------YDSRILFLVTNLQTLFATEQVFHNETAKIYSELEAIVDK 235 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555554443 334556677788888888899999999999988766543
No 14
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=49.43 E-value=1.3e+02 Score=26.22 Aligned_cols=46 Identities=9% Similarity=0.109 Sum_probs=29.7
Q ss_pred HHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHH
Q 044677 185 LKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSG 231 (250)
Q Consensus 185 ~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~ 231 (250)
....++.-+..|..++..+.... .-....+|.+|+.+-.+=..-+.
T Consensus 195 ~~~~~~~a~~~Y~~~l~~~n~~~-~~y~~~~~~~~~~~Q~lEe~Ri~ 240 (320)
T 3m3w_A 195 CTKEAEKMKTQYEQTLAELNRYT-PRYMEDMEQAFESCQAAERQRLL 240 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777888888887766 34667888888765544443333
No 15
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=47.88 E-value=1.5e+02 Score=26.37 Aligned_cols=24 Identities=13% Similarity=0.135 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhhh
Q 044677 134 CEETKKELSRKTRQFEDWYNKYIT 157 (250)
Q Consensus 134 ~e~~~Kelekk~~~l~~~~~k~~~ 157 (250)
+..+.|.||+....++....||..
T Consensus 126 ~ke~kk~fek~~~~yd~al~k~~~ 149 (385)
T 2q13_A 126 ILTLKEVFQIASNDHDAAINRYSR 149 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 335677888888888887777753
No 16
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=39.77 E-value=1.7e+02 Score=24.53 Aligned_cols=36 Identities=14% Similarity=0.256 Sum_probs=26.0
Q ss_pred HhcHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044677 205 EKSLTSLRNHLPELFKAMSEISFACSGMYRDLKNIAQ 241 (250)
Q Consensus 205 ~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~l~~~~~ 241 (250)
+.-...|. .|..+.+|-..|-..|.+..++|.....
T Consensus 190 ~~~~e~l~-~l~~~v~aQl~y~~~~~e~L~~l~~~l~ 225 (240)
T 2z0v_A 190 ENDVEQVS-QLAVFIEAALDYHRQSTEILQELQSKLQ 225 (240)
T ss_dssp HSTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCcHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33355665 7777888888888888888888766554
No 17
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=33.11 E-value=38 Score=23.42 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=30.0
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 044677 117 INTIMHHQEEEMKLKERCEETKKELSRKTRQFEDWYNK 154 (250)
Q Consensus 117 v~~i~~~Q~eE~~~k~k~e~~~Kelekk~~~l~~~~~k 154 (250)
|==+-.||..|.....+.|.+..+|+..+..|+.+.+|
T Consensus 9 lvl~~~q~~ae~~L~~~lE~~~~~Lee~t~~L~~EK~k 46 (66)
T 3hls_A 9 LVLLGEQFREEYKLTQELEMLTDRLQLTLRALEDEKKK 46 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33356788888888888899889999888888877666
No 18
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=30.60 E-value=52 Score=24.97 Aligned_cols=50 Identities=14% Similarity=0.380 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Q 044677 51 KAYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAAL 116 (250)
Q Consensus 51 k~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~~ 116 (250)
-.|+.+.-+||+-.+ |+.-+ ...-.|+++|+. -+|++++|.+....|+..
T Consensus 5 ~~~l~siv~WLRaGY-P~GVP---------~~Dy~PLlALL~------r~Ltdeev~~Va~~L~~~ 54 (103)
T 2kvc_A 5 NRFLTSIVAWLRAGY-PEGIP---------PTDSFAVLALLC------RRLSHDEVKAVANELMRL 54 (103)
T ss_dssp HHHHHHHHHHHHHHC-TTCCC---------HHHHHHHHHHHT------TTSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHccC-CCCCC---------CcchHHHHHHHh------ccCCHHHHHHHHHHHHHc
Confidence 468899999999865 32110 011358888887 589999998888777654
No 19
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=30.22 E-value=52 Score=25.36 Aligned_cols=49 Identities=16% Similarity=0.394 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Q 044677 52 AYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAAL 116 (250)
Q Consensus 52 ~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~~ 116 (250)
.|+.++-+||+--+ |+--+ ...-.|+++|+. -+|++++|.+....|+..
T Consensus 8 ~~l~siv~WLRAGY-P~GVP---------~~Dy~PLLALL~------r~Ltdeev~~Va~~L~~~ 56 (112)
T 2lky_A 8 AFLAKIAAWLNAGY-PEGVP---------GPDRVPLLALLT------RRLTNDEIKAIAEDLEKR 56 (112)
T ss_dssp HHHHHHHHHHHHHC-SSCCC---------HHHHHHHHHHHT------TTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccC-CCCCC---------CcchHHHHHHHc------ccCCHHHHHHHHHHHHHc
Confidence 48888999999865 32110 011258888887 789999999988888754
No 20
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=29.90 E-value=1.6e+02 Score=23.54 Aligned_cols=19 Identities=26% Similarity=0.487 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 044677 29 TIQLWAVVQEWNSQFCKLI 47 (250)
Q Consensus 29 t~qLe~el~~W~~sF~~wi 47 (250)
.-||...|......|++-|
T Consensus 5 LTQLQd~ldqLa~~f~nsi 23 (151)
T 1yke_B 5 LTQLQICLDQMTEQFCATL 23 (151)
T ss_dssp HHHHHHHHHHHHHHTTTTH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4588899999999998887
No 21
>1no1_A G39P, replisome organizer, gene 39; helical, bipartite, natively unfolded domain, replication; 2.40A {Bacillus phage SPP1} SCOP: a.179.1.1
Probab=28.67 E-value=1.1e+02 Score=23.96 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHhccCChHHHHHHHHHHHHH
Q 044677 87 IQRLLLAWHDLLQKLPDEIARSAIGNFAAL 116 (250)
Q Consensus 87 If~lC~~W~~~ld~lp~k~v~~AIk~f~~~ 116 (250)
.-...+.|++.|..+|-+.|..|++..+..
T Consensus 26 ~~~~ve~W~~lL~d~~ye~v~~Al~~hI~~ 55 (126)
T 1no1_A 26 LKGTVKAWHRVLAEYELEEIMNNLTDYAKV 55 (126)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhcCCHHHHHHHHHHHHHc
Confidence 457889999999999999999999988764
No 22
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=27.34 E-value=2.8e+02 Score=23.31 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=23.6
Q ss_pred HhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044677 208 LTSLRNHLPELFKAMSEISFACSGMYRDLKNIAQ 241 (250)
Q Consensus 208 l~~Lq~gL~~vF~aL~~Fs~~s~~~ye~l~~~~~ 241 (250)
...+ ..|..+.++--+|-..|.+..++|.....
T Consensus 209 ~e~~-~~L~~~v~aQl~y~~~~~e~L~~l~~~l~ 241 (256)
T 1zww_A 209 IEQV-SQLSALVQAQLEYHKQAVQILQQVTVRLE 241 (256)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444 56677777888888888888888766554
No 23
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=26.27 E-value=2.8e+02 Score=22.94 Aligned_cols=44 Identities=7% Similarity=0.154 Sum_probs=28.9
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHH
Q 044677 181 VVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEI 225 (250)
Q Consensus 181 ~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~F 225 (250)
.++.++.++..-...|..++..+....- .+..-+|.+|+.|..+
T Consensus 164 ~~eK~~~k~~ka~~~Y~~~v~~~n~~~~-~~~~~~~~~~~~lQ~l 207 (276)
T 2v0o_A 164 EIEKAAVKSKKATDTYKLYVEKYALAKA-DFEQKMTETAQKFQDI 207 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 4556666666666778877777765543 4577778877766433
No 24
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=23.14 E-value=2.5e+02 Score=21.35 Aligned_cols=66 Identities=15% Similarity=0.188 Sum_probs=48.3
Q ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhH----HHHHHHHHh
Q 044677 89 RLLLAWHDLLQKLPDEIARSAIGNFAALINTIMHHQEEEMKLKERCEETKKELSRKTR----QFEDWYNKY 155 (250)
Q Consensus 89 ~lC~~W~~~ld~lp~k~v~~AIk~f~~~v~~i~~~Q~eE~~~k~k~e~~~Kelekk~~----~l~~~~~k~ 155 (250)
.=|+.|...+.. ...+...+|..+=..|..+-.....=+..-+..|..+-||||..+ +|++.+.||
T Consensus 17 ~E~e~~k~K~~~-~~~e~~~~~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~ 86 (111)
T 2v66_B 17 YEVEALKEKLEH-QYAQSYKQVSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRL 86 (111)
T ss_dssp HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHH
Confidence 346778887777 556777788888888888877776666667778888888888854 455666665
No 25
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=22.74 E-value=4.2e+02 Score=23.86 Aligned_cols=50 Identities=14% Similarity=0.168 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 044677 105 IARSAIGNFAALINTIMHHQEEEMKLKERCEETKKELSRKTRQFEDWYNK 154 (250)
Q Consensus 105 ~v~~AIk~f~~~v~~i~~~Q~eE~~~k~k~e~~~Kelekk~~~l~~~~~k 154 (250)
.+-+|++.+...+..++..-..+...+.....+.|.|++=-+.|...+.+
T Consensus 370 t~eeal~~~~~~i~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (471)
T 3mq9_A 370 TVDEALKDAQTRITAARDGLRAVMEARNVTHLLQQELTEAQKGFQDVEAQ 419 (471)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHhhhHHHHHHH
Confidence 45678888888888888777666655555445555555544555544433
No 26
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=22.45 E-value=3.6e+02 Score=22.91 Aligned_cols=40 Identities=10% Similarity=0.228 Sum_probs=30.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044677 24 HHHERTIQLWAVVQEWNSQFCKLIDHQKAYIKALNSWLKL 63 (250)
Q Consensus 24 ~h~~at~qLe~el~~W~~sF~~wi~~Qk~YV~aLn~WL~~ 63 (250)
.|+-.-.-..+.+..++=...++|+.-+.|.+||++=..-
T Consensus 10 ~~~~t~~~y~nimeqfnP~l~nlv~lg~~Y~kAl~a~~~A 49 (222)
T 3ok8_A 10 FYRSTMAIYKSIMEQFNPALENLVYLGNNYLRAFHALSEA 49 (222)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 3444444456678889999999999999999999886653
No 27
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=22.08 E-value=3.3e+02 Score=22.40 Aligned_cols=62 Identities=15% Similarity=0.213 Sum_probs=34.4
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHhcHhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044677 181 VVDVLKKRLEEEEEAYQRQCGAVREKSLTSLRNHLPELFKAMSEISFACSGMYRDLKNIAQH 242 (250)
Q Consensus 181 ~le~~rkrle~E~~~~~~~~~~~r~~tl~~Lq~gL~~vF~aL~~Fs~~s~~~ye~l~~~~~~ 242 (250)
.++..+.+.+.++...-..++..-.--+..|+..|-.....+........+.|+.+....+.
T Consensus 185 ~~n~~~~~~~~~~~~~~~~lQ~le~~R~~~lk~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (276)
T 2v0o_A 185 KYALAKADFEQKMTETAQKFQDIEETHLIHIKEIIGSLSNAIKEIHLQIGQVHEEFINNMAN 246 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHh
Confidence 34445555544444444444444444455666666666666666555556677776665544
No 28
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=21.13 E-value=1.4e+02 Score=22.68 Aligned_cols=48 Identities=15% Similarity=0.231 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhhhcccccccccCCCCCCCCCCCChHHHHHHHHHHHhccCChHHHHHHHHHHHH
Q 044677 52 AYIKALNSWLKLNLIPIESSLREKVSSPPRIQTPPIQRLLLAWHDLLQKLPDEIARSAIGNFAA 115 (250)
Q Consensus 52 ~YV~aLn~WL~~~~~p~e~~~~~~~~sP~r~~aPpIf~lC~~W~~~ld~lp~k~v~~AIk~f~~ 115 (250)
.|+.++-+||+..+ |+.-+ ...-.|+++|+. -+|++++|...+..|+.
T Consensus 11 ~~l~siv~WLRaGY-PeGVP---------~~Dy~PLlALL~------R~Ltddev~~Va~~L~~ 58 (107)
T 3ol3_A 11 TFMDNVLGWLHKGY-PEGVP---------PKDYFALLALLK------RSLTEDEVVRAAQAILR 58 (107)
T ss_dssp HHHHHHHHHHHHHC-TTCBC---------GGGHHHHHHHHT------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccC-CCCCC---------CCccHHHHHHhc------ccCCHHHHHHHHHHHHh
Confidence 37899999999876 32111 112368888876 37999999877766643
Done!