Query 044681
Match_columns 184
No_of_seqs 130 out of 1141
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 09:37:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044681hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 6E-50 2E-54 333.2 18.6 170 8-177 6-204 (216)
2 2a33_A Hypothetical protein; s 100.0 2.1E-48 7.3E-53 323.6 18.8 177 1-177 1-208 (215)
3 3sbx_A Putative uncharacterize 100.0 5.9E-48 2E-52 315.6 18.6 133 9-142 11-143 (189)
4 1t35_A Hypothetical protein YV 100.0 1.7E-47 5.7E-52 312.7 16.6 154 11-164 1-183 (191)
5 3qua_A Putative uncharacterize 100.0 4.1E-47 1.4E-51 312.8 17.9 135 7-142 18-152 (199)
6 1weh_A Conserved hypothetical 100.0 5.4E-44 1.8E-48 287.3 16.3 147 11-159 1-170 (171)
7 1wek_A Hypothetical protein TT 100.0 9.7E-43 3.3E-47 289.9 16.6 151 11-163 37-216 (217)
8 3gh1_A Predicted nucleotide-bi 100.0 6E-41 2.1E-45 301.7 18.1 153 8-162 143-333 (462)
9 3bq9_A Predicted rossmann fold 100.0 8.5E-40 2.9E-44 295.5 15.8 150 9-160 142-329 (460)
10 1rcu_A Conserved hypothetical 100.0 5.2E-38 1.8E-42 257.8 17.2 144 6-162 18-194 (195)
11 2iz6_A Molybdenum cofactor car 100.0 2.1E-38 7.3E-43 256.3 12.9 146 8-161 10-172 (176)
12 3maj_A DNA processing chain A; 99.2 1.2E-10 4.3E-15 103.6 14.9 138 11-159 127-303 (382)
13 3uqz_A DNA processing protein 99.1 1.1E-09 3.9E-14 94.2 13.4 122 11-142 106-246 (288)
14 2nx2_A Hypothetical protein YP 97.7 0.0018 6.2E-08 51.7 15.4 141 10-159 1-178 (181)
15 3imk_A Putative molybdenum car 97.4 0.0041 1.4E-07 49.0 13.0 111 45-160 10-127 (158)
16 2o6l_A UDP-glucuronosyltransfe 95.1 0.33 1.1E-05 36.1 11.0 41 91-142 70-111 (170)
17 3ehd_A Uncharacterized conserv 94.5 0.11 3.8E-06 40.7 7.1 41 96-142 58-102 (162)
18 2khz_A C-MYC-responsive protei 94.2 0.1 3.6E-06 40.5 6.5 40 97-142 67-108 (165)
19 3s2u_A UDP-N-acetylglucosamine 93.9 0.47 1.6E-05 40.3 10.6 98 10-142 179-277 (365)
20 3otg_A CALG1; calicheamicin, T 92.4 1 3.5E-05 37.6 10.2 50 102-161 303-374 (412)
21 1f8y_A Nucleoside 2-deoxyribos 92.3 0.18 6.1E-06 39.1 5.0 42 96-143 67-112 (157)
22 4fyk_A Deoxyribonucleoside 5'- 91.8 0.44 1.5E-05 37.0 6.7 41 96-142 57-99 (152)
23 3rsc_A CALG2; TDP, enediyne, s 91.1 3.6 0.00012 34.4 12.2 49 103-161 309-379 (415)
24 3h4t_A Glycosyltransferase GTF 89.2 5.9 0.0002 33.6 12.1 86 42-142 221-309 (404)
25 1iir_A Glycosyltransferase GTF 89.2 4.5 0.00015 34.3 11.3 109 37-160 232-366 (415)
26 2f62_A Nucleoside 2-deoxyribos 88.3 0.69 2.4E-05 35.9 5.1 41 96-142 56-103 (161)
27 1rrv_A Glycosyltransferase GTF 88.2 9 0.00031 32.3 12.6 110 35-160 229-367 (416)
28 2iya_A OLEI, oleandomycin glyc 87.4 7.6 0.00026 32.7 11.6 48 104-161 318-387 (424)
29 2p6p_A Glycosyl transferase; X 86.8 7.8 0.00027 32.0 11.2 29 104-142 276-304 (384)
30 2yjn_A ERYCIII, glycosyltransf 85.9 4.1 0.00014 34.8 9.2 59 91-161 321-401 (441)
31 1s2d_A Purine trans deoxyribos 85.5 1.3 4.4E-05 34.5 5.3 41 97-143 71-115 (167)
32 3hbm_A UDP-sugar hydrolase; PS 85.1 12 0.00041 31.1 11.5 45 103-159 221-265 (282)
33 4fzr_A SSFS6; structural genom 83.7 2.8 9.7E-05 35.0 7.0 31 102-142 295-325 (398)
34 2iyf_A OLED, oleandomycin glyc 82.5 14 0.00048 30.9 11.0 30 103-142 295-324 (430)
35 3rss_A Putative uncharacterize 82.2 3.2 0.00011 37.6 7.2 98 42-142 244-353 (502)
36 3rpz_A ADP/ATP-dependent NAD(P 81.3 1.7 5.7E-05 36.5 4.7 95 42-142 30-130 (279)
37 3ia7_A CALG4; glycosysltransfe 79.3 8.1 0.00028 31.8 8.2 30 103-142 293-322 (402)
38 3oti_A CALG3; calicheamicin, T 78.8 8.6 0.00029 32.1 8.3 29 104-142 296-324 (398)
39 3ufx_B Succinyl-COA synthetase 76.9 13 0.00043 32.6 9.1 62 108-176 302-382 (397)
40 2jzc_A UDP-N-acetylglucosamine 71.6 12 0.00041 30.2 7.1 30 103-142 127-157 (224)
41 3ek6_A Uridylate kinase; UMPK 71.6 38 0.0013 27.2 11.1 107 11-130 9-154 (243)
42 3tsa_A SPNG, NDP-rhamnosyltran 70.0 6.6 0.00023 32.5 5.3 47 106-162 285-355 (391)
43 2f9f_A First mannosyl transfer 69.6 20 0.00067 26.3 7.5 53 100-161 90-160 (177)
44 2an1_A Putative kinase; struct 69.1 9.2 0.00032 31.3 6.0 60 10-73 4-93 (292)
45 4hwg_A UDP-N-acetylglucosamine 68.1 56 0.0019 27.8 11.3 62 90-162 264-341 (385)
46 2gk4_A Conserved hypothetical 67.6 6.9 0.00024 32.0 4.8 70 44-116 5-93 (232)
47 3nq4_A 6,7-dimethyl-8-ribityll 67.3 41 0.0014 25.9 9.0 53 106-158 71-130 (156)
48 3llv_A Exopolyphosphatase-rela 67.0 30 0.001 24.3 7.9 13 105-117 68-80 (141)
49 4eg0_A D-alanine--D-alanine li 66.9 7.9 0.00027 31.8 5.2 47 11-57 13-59 (317)
50 1v4v_A UDP-N-acetylglucosamine 66.3 9.1 0.00031 31.4 5.4 52 100-162 267-333 (376)
51 4ffl_A PYLC; amino acid, biosy 65.9 28 0.00095 28.9 8.5 67 46-118 5-74 (363)
52 2g1u_A Hypothetical protein TM 65.8 35 0.0012 24.6 9.5 78 43-123 20-100 (155)
53 4amg_A Snogd; transferase, pol 64.7 13 0.00044 30.6 6.1 30 103-142 300-329 (400)
54 2c92_A 6,7-dimethyl-8-ribityll 63.9 11 0.00039 29.2 5.2 55 104-158 69-130 (160)
55 4e3z_A Putative oxidoreductase 63.6 38 0.0013 26.7 8.5 23 107-129 104-134 (272)
56 1vgv_A UDP-N-acetylglucosamine 62.6 60 0.0021 26.2 14.0 52 99-161 274-340 (384)
57 3f6r_A Flavodoxin; FMN binding 61.2 11 0.00037 27.2 4.4 33 11-46 1-33 (148)
58 2bon_A Lipid kinase; DAG kinas 60.6 7.3 0.00025 32.7 3.8 52 106-159 81-143 (332)
59 2i2c_A Probable inorganic poly 59.7 19 0.00065 29.4 6.2 57 12-73 1-67 (272)
60 2i0f_A 6,7-dimethyl-8-ribityll 58.5 26 0.00089 27.0 6.4 52 107-158 73-131 (157)
61 1hqk_A 6,7-dimethyl-8-ribityll 58.5 17 0.00057 28.0 5.2 53 106-158 70-129 (154)
62 3h7a_A Short chain dehydrogena 58.5 46 0.0016 26.1 8.2 55 11-73 7-61 (252)
63 3kts_A Glycerol uptake operon 57.9 14 0.00049 29.4 4.9 65 94-163 16-83 (192)
64 3qiv_A Short-chain dehydrogena 57.4 64 0.0022 24.9 9.2 33 12-52 10-42 (253)
65 3hbf_A Flavonoid 3-O-glucosylt 56.7 35 0.0012 30.1 7.8 41 91-142 329-370 (454)
66 3sju_A Keto reductase; short-c 55.3 36 0.0012 27.2 7.1 54 12-73 25-78 (279)
67 3r6d_A NAD-dependent epimerase 53.3 34 0.0012 25.8 6.4 13 105-117 71-83 (221)
68 3r8s_O 50S ribosomal protein L 52.7 20 0.00067 26.3 4.6 39 29-67 67-113 (116)
69 3dzc_A UDP-N-acetylglucosamine 52.5 1.1E+02 0.0036 25.9 13.4 51 100-161 300-365 (396)
70 2acv_A Triterpene UDP-glucosyl 52.4 40 0.0014 29.3 7.4 99 33-142 264-375 (463)
71 3dhn_A NAD-dependent epimerase 52.2 15 0.00052 27.8 4.1 14 105-118 65-78 (227)
72 3q2o_A Phosphoribosylaminoimid 52.0 80 0.0027 26.4 9.0 62 46-113 18-81 (389)
73 1vkf_A Glycerol uptake operon 51.9 18 0.00061 28.8 4.5 54 104-162 28-84 (188)
74 2pq6_A UDP-glucuronosyl/UDP-gl 51.1 29 0.00099 30.3 6.2 96 35-142 285-396 (482)
75 3ff4_A Uncharacterized protein 51.0 14 0.00049 26.9 3.6 34 9-47 2-35 (122)
76 1rvv_A Riboflavin synthase; tr 50.9 35 0.0012 26.2 6.0 53 106-158 70-129 (154)
77 1nns_A L-asparaginase II; amid 50.2 30 0.001 29.4 6.0 34 106-142 78-111 (326)
78 1iow_A DD-ligase, DDLB, D-ALA\ 50.0 26 0.0009 27.8 5.4 38 12-49 3-40 (306)
79 1ejb_A Lumazine synthase; anal 49.9 15 0.00052 28.7 3.8 52 107-158 80-138 (168)
80 1id1_A Putative potassium chan 49.9 34 0.0012 24.6 5.6 73 42-118 3-82 (153)
81 3oid_A Enoyl-[acyl-carrier-pro 49.8 49 0.0017 26.1 7.0 54 12-73 5-59 (258)
82 1t2a_A GDP-mannose 4,6 dehydra 49.3 21 0.00073 29.4 4.9 28 45-73 27-54 (375)
83 2iw1_A Lipopolysaccharide core 48.9 50 0.0017 26.4 7.0 53 101-161 264-335 (374)
84 3l77_A Short-chain alcohol deh 48.6 55 0.0019 24.9 7.0 55 11-73 2-57 (235)
85 3tfo_A Putative 3-oxoacyl-(acy 48.5 48 0.0016 26.5 6.8 55 12-74 5-59 (264)
86 3tox_A Short chain dehydrogena 48.4 77 0.0026 25.3 8.1 33 12-52 9-41 (280)
87 3s40_A Diacylglycerol kinase; 48.2 17 0.00059 30.0 4.1 41 34-76 55-97 (304)
88 1c2y_A Protein (lumazine synth 48.1 44 0.0015 25.7 6.1 53 106-158 70-129 (156)
89 3ucx_A Short chain dehydrogena 47.9 57 0.0019 25.6 7.1 54 12-73 12-65 (264)
90 2hna_A Protein MIOC, flavodoxi 47.8 30 0.001 24.8 5.0 34 11-47 1-34 (147)
91 3beo_A UDP-N-acetylglucosamine 47.7 1.1E+02 0.0036 24.5 14.6 51 100-161 275-340 (375)
92 2qv7_A Diacylglycerol kinase D 46.9 18 0.00063 30.2 4.1 40 36-76 73-114 (337)
93 1kz1_A 6,7-dimethyl-8-ribityll 46.8 55 0.0019 25.2 6.5 53 106-158 76-135 (159)
94 2bfw_A GLGA glycogen synthase; 46.7 67 0.0023 23.3 6.9 53 101-161 109-178 (200)
95 3qvo_A NMRA family protein; st 46.6 19 0.00066 27.8 4.0 73 45-120 26-101 (236)
96 2gek_A Phosphatidylinositol ma 46.6 35 0.0012 27.7 5.7 39 9-47 18-56 (406)
97 3h2s_A Putative NADH-flavin re 46.1 43 0.0015 25.0 5.9 16 103-118 58-73 (224)
98 3guy_A Short-chain dehydrogena 45.9 22 0.00076 27.3 4.2 33 11-51 1-33 (230)
99 4id9_A Short-chain dehydrogena 44.7 24 0.00082 28.6 4.4 36 5-48 13-48 (347)
100 3qhp_A Type 1 capsular polysac 44.5 56 0.0019 23.0 6.0 55 99-161 66-138 (166)
101 2bon_A Lipid kinase; DAG kinas 44.4 23 0.0008 29.6 4.4 40 36-76 75-118 (332)
102 2buf_A Acetylglutamate kinase; 44.3 69 0.0024 26.4 7.3 41 11-52 27-69 (300)
103 3gaf_A 7-alpha-hydroxysteroid 44.1 52 0.0018 25.8 6.3 54 12-73 13-66 (256)
104 2gek_A Phosphatidylinositol ma 43.6 65 0.0022 26.1 6.9 54 100-161 275-347 (406)
105 4ibo_A Gluconate dehydrogenase 43.6 70 0.0024 25.4 7.0 54 12-73 27-80 (271)
106 4da9_A Short-chain dehydrogena 43.6 1E+02 0.0035 24.5 8.1 12 107-118 107-118 (280)
107 3r6d_A NAD-dependent epimerase 43.5 33 0.0011 25.9 4.8 34 11-52 5-39 (221)
108 3qlj_A Short chain dehydrogena 43.3 1.3E+02 0.0045 24.3 9.0 13 107-119 114-126 (322)
109 3tjr_A Short chain dehydrogena 43.3 70 0.0024 25.8 7.1 54 12-73 32-85 (301)
110 4fn4_A Short chain dehydrogena 43.0 86 0.003 25.3 7.6 56 11-74 7-62 (254)
111 3orf_A Dihydropteridine reduct 42.8 32 0.0011 27.0 4.8 29 44-73 24-52 (251)
112 3qvo_A NMRA family protein; st 42.8 1.1E+02 0.0037 23.3 10.3 35 9-51 21-56 (236)
113 2dkn_A 3-alpha-hydroxysteroid 42.6 32 0.0011 26.3 4.6 16 32-47 14-29 (255)
114 3v8b_A Putative dehydrogenase, 42.6 72 0.0025 25.5 7.0 28 45-73 31-58 (283)
115 1wv2_A Thiazole moeity, thiazo 41.7 1.5E+02 0.0052 24.7 9.9 109 31-159 123-234 (265)
116 2jah_A Clavulanic acid dehydro 41.7 82 0.0028 24.4 7.0 54 12-73 8-61 (247)
117 4imr_A 3-oxoacyl-(acyl-carrier 41.7 63 0.0022 25.7 6.5 43 31-73 45-87 (275)
118 1fjh_A 3alpha-hydroxysteroid d 41.6 34 0.0012 26.4 4.8 30 11-48 1-30 (257)
119 3fwz_A Inner membrane protein 41.6 91 0.0031 22.0 8.3 74 42-119 7-83 (140)
120 3lyl_A 3-oxoacyl-(acyl-carrier 41.5 72 0.0025 24.5 6.6 54 12-73 6-59 (247)
121 3ew7_A LMO0794 protein; Q8Y8U8 41.4 54 0.0019 24.3 5.7 28 46-74 4-31 (221)
122 3ot5_A UDP-N-acetylglucosamine 41.3 41 0.0014 28.7 5.5 61 90-161 283-359 (403)
123 1hdo_A Biliverdin IX beta redu 41.2 1E+02 0.0034 22.4 9.1 72 45-119 6-79 (206)
124 3ezl_A Acetoacetyl-COA reducta 41.0 52 0.0018 25.4 5.8 35 8-50 10-44 (256)
125 1jfl_A Aspartate racemase; alp 40.8 52 0.0018 25.7 5.7 21 54-74 102-122 (228)
126 3dmy_A Protein FDRA; predicted 40.8 26 0.0009 31.5 4.4 35 108-142 329-369 (480)
127 2him_A L-asparaginase 1; hydro 40.7 47 0.0016 28.7 5.8 35 106-142 100-134 (358)
128 3s2e_A Zinc-containing alcohol 40.3 44 0.0015 27.4 5.4 83 43-128 168-253 (340)
129 3r3s_A Oxidoreductase; structu 40.1 1.4E+02 0.0048 23.8 9.0 12 107-118 128-139 (294)
130 3u5t_A 3-oxoacyl-[acyl-carrier 39.7 97 0.0033 24.5 7.3 18 31-48 39-56 (267)
131 3ew7_A LMO0794 protein; Q8Y8U8 39.7 42 0.0015 24.9 4.9 30 12-49 1-30 (221)
132 3edm_A Short chain dehydrogena 39.5 1.1E+02 0.0038 23.8 7.6 54 12-73 9-63 (259)
133 1u0t_A Inorganic polyphosphate 39.3 40 0.0014 27.9 5.0 26 48-74 81-106 (307)
134 3s99_A Basic membrane lipoprot 38.9 59 0.002 27.6 6.2 42 30-74 195-236 (356)
135 3nxk_A Cytoplasmic L-asparagin 38.8 56 0.0019 27.9 6.0 34 106-142 87-120 (334)
136 2pk3_A GDP-6-deoxy-D-LYXO-4-he 38.6 41 0.0014 26.7 4.9 40 1-48 1-41 (321)
137 4dmm_A 3-oxoacyl-[acyl-carrier 38.5 65 0.0022 25.5 6.1 43 31-73 40-83 (269)
138 3ksu_A 3-oxoacyl-acyl carrier 38.3 89 0.0031 24.5 6.9 54 12-73 12-68 (262)
139 3rkr_A Short chain oxidoreduct 38.3 87 0.003 24.4 6.7 54 12-73 30-83 (262)
140 1wls_A L-asparaginase; structu 38.2 45 0.0015 28.4 5.2 35 106-142 72-106 (328)
141 4g81_D Putative hexonate dehyd 38.0 69 0.0024 25.9 6.2 43 31-73 21-63 (255)
142 3i4f_A 3-oxoacyl-[acyl-carrier 38.0 59 0.002 25.2 5.7 59 7-73 3-62 (264)
143 3s40_A Diacylglycerol kinase; 37.6 14 0.00047 30.6 1.8 49 107-159 63-122 (304)
144 3is3_A 17BETA-hydroxysteroid d 37.3 90 0.0031 24.5 6.7 54 12-73 19-73 (270)
145 3c24_A Putative oxidoreductase 37.2 46 0.0016 26.6 5.0 33 7-47 7-39 (286)
146 3h2s_A Putative NADH-flavin re 37.2 48 0.0017 24.7 4.9 33 12-52 1-33 (224)
147 2ph3_A 3-oxoacyl-[acyl carrier 37.1 1.3E+02 0.0044 22.7 7.5 105 11-134 1-114 (245)
148 4b79_A PA4098, probable short- 36.8 1.5E+02 0.0053 23.7 8.1 77 44-123 13-94 (242)
149 2ij9_A Uridylate kinase; struc 36.8 29 0.00099 27.0 3.6 41 12-52 2-43 (219)
150 1yb1_A 17-beta-hydroxysteroid 36.8 1.3E+02 0.0043 23.6 7.5 62 4-73 24-85 (272)
151 2qv7_A Diacylglycerol kinase D 36.6 14 0.00048 30.9 1.7 48 108-159 81-139 (337)
152 2qjg_A Putative aldolase MJ040 36.6 1.6E+02 0.0054 23.3 8.2 60 99-160 192-256 (273)
153 1zem_A Xylitol dehydrogenase; 36.5 1.1E+02 0.0038 23.8 7.1 54 12-73 8-61 (262)
154 1geg_A Acetoin reductase; SDR 36.4 1.1E+02 0.0038 23.6 7.1 54 12-73 3-56 (256)
155 1mqs_A SLY1 protein, SLY1P; SM 36.4 54 0.0019 30.3 5.9 52 108-160 609-661 (671)
156 3lab_A Putative KDPG (2-keto-3 36.4 79 0.0027 25.4 6.2 58 8-73 10-69 (217)
157 3c48_A Predicted glycosyltrans 36.3 1.1E+02 0.0038 25.1 7.3 55 99-161 317-389 (438)
158 3tov_A Glycosyl transferase fa 36.3 1.8E+02 0.0062 24.0 9.2 105 11-150 185-292 (349)
159 2jjm_A Glycosyl transferase, g 36.2 81 0.0028 25.6 6.5 52 102-161 279-348 (394)
160 2c07_A 3-oxoacyl-(acyl-carrier 36.2 1.1E+02 0.0036 24.3 7.0 31 12-50 45-75 (285)
161 3v2d_S 50S ribosomal protein L 36.2 38 0.0013 24.7 3.8 40 28-67 62-109 (112)
162 1zmt_A Haloalcohol dehalogenas 36.1 42 0.0014 26.2 4.5 33 11-51 1-33 (254)
163 3se7_A VANA; alpha-beta struct 35.9 24 0.00081 29.4 3.1 37 11-47 3-39 (346)
164 3imf_A Short chain dehydrogena 35.9 62 0.0021 25.3 5.5 33 12-52 7-39 (257)
165 2c20_A UDP-glucose 4-epimerase 35.7 48 0.0016 26.4 4.9 30 11-48 1-30 (330)
166 4h3k_B RNA polymerase II subun 35.7 45 0.0015 27.1 4.5 35 11-52 25-60 (214)
167 4egf_A L-xylulose reductase; s 35.7 1.4E+02 0.0048 23.4 7.6 104 12-134 21-132 (266)
168 2ark_A Flavodoxin; FMN, struct 35.6 50 0.0017 24.7 4.7 34 10-46 3-37 (188)
169 3okp_A GDP-mannose-dependent a 35.3 1.1E+02 0.0037 24.5 7.0 56 99-162 264-343 (394)
170 3pk0_A Short-chain dehydrogena 35.2 1.3E+02 0.0046 23.4 7.4 12 107-118 88-99 (262)
171 3p9y_A CG14216, LD40846P; phos 34.9 72 0.0025 25.6 5.6 37 9-52 7-44 (198)
172 3c48_A Predicted glycosyltrans 34.6 50 0.0017 27.3 4.9 39 9-47 18-63 (438)
173 3r5x_A D-alanine--D-alanine li 34.6 14 0.00049 29.7 1.5 38 11-48 3-40 (307)
174 2b69_A UDP-glucuronate decarbo 34.5 53 0.0018 26.5 5.0 34 7-48 23-56 (343)
175 1vq8_N 50S ribosomal protein L 34.4 52 0.0018 26.1 4.7 40 29-68 79-128 (187)
176 1edo_A Beta-keto acyl carrier 34.4 96 0.0033 23.5 6.3 54 12-73 2-56 (244)
177 3ged_A Short-chain dehydrogena 34.2 56 0.0019 26.3 5.0 28 45-73 5-32 (247)
178 3v2g_A 3-oxoacyl-[acyl-carrier 34.2 1.5E+02 0.005 23.5 7.5 27 45-72 34-60 (271)
179 2ae2_A Protein (tropinone redu 34.2 1.3E+02 0.0044 23.3 7.1 33 12-52 10-42 (260)
180 3osu_A 3-oxoacyl-[acyl-carrier 34.1 1.3E+02 0.0043 23.2 7.0 58 8-73 1-59 (246)
181 2d6f_A Glutamyl-tRNA(Gln) amid 33.9 63 0.0022 28.7 5.7 33 107-142 167-199 (435)
182 1o7j_A L-asparaginase; atomic 33.9 41 0.0014 28.5 4.3 33 107-142 85-117 (327)
183 2zki_A 199AA long hypothetical 33.8 47 0.0016 24.8 4.3 31 11-45 4-34 (199)
184 1mxh_A Pteridine reductase 2; 33.7 80 0.0027 24.7 5.8 32 12-51 12-43 (276)
185 1orr_A CDP-tyvelose-2-epimeras 33.6 54 0.0019 26.2 4.9 30 11-48 1-30 (347)
186 3zqu_A Probable aromatic acid 33.4 8.1 0.00028 31.1 -0.3 35 108-142 95-136 (209)
187 2a5l_A Trp repressor binding p 33.2 72 0.0025 23.6 5.2 33 11-46 5-37 (200)
188 2r3b_A YJEF-related protein; p 33.1 2.1E+02 0.0072 23.7 9.4 95 42-142 44-146 (310)
189 2pzm_A Putative nucleotide sug 33.0 1.9E+02 0.0064 23.1 8.4 73 45-119 23-100 (330)
190 3gk3_A Acetoacetyl-COA reducta 33.0 1.3E+02 0.0045 23.4 7.1 115 1-134 15-137 (269)
191 3ek2_A Enoyl-(acyl-carrier-pro 33.0 94 0.0032 24.0 6.1 63 2-73 5-69 (271)
192 4iin_A 3-ketoacyl-acyl carrier 32.9 1.1E+02 0.0036 24.1 6.5 54 12-73 30-84 (271)
193 1ae1_A Tropinone reductase-I; 32.9 1.3E+02 0.0045 23.6 7.0 54 12-73 22-75 (273)
194 3pxx_A Carveol dehydrogenase; 32.8 1.4E+02 0.0048 23.3 7.2 30 12-49 11-40 (287)
195 1dhr_A Dihydropteridine reduct 32.8 54 0.0019 25.3 4.6 28 45-73 10-37 (241)
196 3fro_A GLGA glycogen synthase; 32.6 1.2E+02 0.0042 24.5 7.0 53 101-161 324-393 (439)
197 3e8x_A Putative NAD-dependent 32.6 46 0.0016 25.4 4.1 27 46-73 25-51 (236)
198 3a28_C L-2.3-butanediol dehydr 32.6 1.3E+02 0.0044 23.3 6.8 32 12-51 3-34 (258)
199 2xci_A KDO-transferase, 3-deox 32.5 37 0.0013 28.5 3.8 52 101-161 271-344 (374)
200 3icc_A Putative 3-oxoacyl-(acy 32.5 1.4E+02 0.0048 22.7 7.0 54 12-73 8-62 (255)
201 3k5w_A Carbohydrate kinase; 11 32.4 1.4E+02 0.0049 26.5 7.8 100 42-159 236-353 (475)
202 1epu_A S-SEC1; parallel beta-s 32.2 76 0.0026 28.6 6.0 51 109-160 538-588 (591)
203 2wlt_A L-asparaginase; hydrola 32.1 45 0.0015 28.4 4.2 33 107-142 85-117 (332)
204 1ykg_A SIR-FP, sulfite reducta 32.1 26 0.0009 26.0 2.5 34 9-45 7-40 (167)
205 4ffl_A PYLC; amino acid, biosy 32.1 53 0.0018 27.1 4.6 29 11-48 1-29 (363)
206 3ioy_A Short-chain dehydrogena 31.9 1.1E+02 0.0038 24.9 6.6 33 12-52 9-41 (319)
207 2c5a_A GDP-mannose-3', 5'-epim 31.9 76 0.0026 26.2 5.6 40 1-48 19-58 (379)
208 3doj_A AT3G25530, dehydrogenas 31.5 63 0.0021 26.4 5.0 33 7-48 17-49 (310)
209 4fs3_A Enoyl-[acyl-carrier-pro 31.5 1.6E+02 0.0053 23.1 7.3 55 12-73 7-63 (256)
210 3b6i_A Flavoprotein WRBA; flav 31.5 67 0.0023 23.8 4.8 33 11-46 1-34 (198)
211 3c85_A Putative glutathione-re 31.4 1.5E+02 0.0052 21.6 7.0 80 42-125 39-123 (183)
212 1hdo_A Biliverdin IX beta redu 31.3 71 0.0024 23.2 4.9 31 12-50 4-34 (206)
213 2rhc_B Actinorhodin polyketide 31.3 1.4E+02 0.0049 23.4 7.0 54 12-73 23-76 (277)
214 3i1j_A Oxidoreductase, short c 31.3 1.6E+02 0.0055 22.3 7.2 13 107-119 94-106 (247)
215 1f0k_A MURG, UDP-N-acetylgluco 31.2 71 0.0024 25.6 5.2 32 12-47 7-38 (364)
216 3qja_A IGPS, indole-3-glycerol 31.1 2.2E+02 0.0074 23.3 9.3 107 32-160 151-261 (272)
217 2hq1_A Glucose/ribitol dehydro 31.1 1.7E+02 0.0058 22.1 7.9 54 12-73 6-60 (247)
218 3p19_A BFPVVD8, putative blue 31.0 1.9E+02 0.0066 22.7 8.5 31 43-74 17-47 (266)
219 3enk_A UDP-glucose 4-epimerase 30.9 74 0.0025 25.4 5.2 34 7-48 1-34 (341)
220 2wsb_A Galactitol dehydrogenas 30.9 85 0.0029 24.0 5.4 33 12-52 12-44 (254)
221 3iwh_A Rhodanese-like domain p 30.9 97 0.0033 21.2 5.2 30 11-48 56-85 (103)
222 2qq5_A DHRS1, dehydrogenase/re 30.9 1E+02 0.0035 23.9 6.0 32 12-51 6-37 (260)
223 3sx2_A Putative 3-ketoacyl-(ac 30.9 1.6E+02 0.0053 23.0 7.1 30 12-49 14-43 (278)
224 1zq1_A Glutamyl-tRNA(Gln) amid 30.8 84 0.0029 27.9 5.9 34 107-142 168-201 (438)
225 1wv9_A Rhodanese homolog TT165 30.8 53 0.0018 21.7 3.7 26 12-45 54-79 (94)
226 3ijr_A Oxidoreductase, short c 30.7 2E+02 0.0069 22.8 9.4 29 44-73 49-77 (291)
227 3rih_A Short chain dehydrogena 30.5 1.4E+02 0.0048 24.0 7.0 64 2-73 32-96 (293)
228 1fmc_A 7 alpha-hydroxysteroid 30.4 1.5E+02 0.0052 22.4 6.8 33 12-52 12-44 (255)
229 1wma_A Carbonyl reductase [NAD 30.3 1.1E+02 0.0039 23.3 6.1 58 8-73 1-59 (276)
230 3dqp_A Oxidoreductase YLBE; al 30.1 56 0.0019 24.5 4.2 29 45-74 3-31 (219)
231 1qyc_A Phenylcoumaran benzylic 30.1 55 0.0019 25.8 4.3 30 11-48 4-33 (308)
232 3fro_A GLGA glycogen synthase; 30.1 73 0.0025 25.9 5.1 37 11-47 2-39 (439)
233 1o5i_A 3-oxoacyl-(acyl carrier 29.9 75 0.0025 24.7 5.0 34 11-52 19-52 (249)
234 1bvy_F Protein (cytochrome P45 29.9 20 0.00067 27.9 1.5 16 56-71 124-139 (191)
235 2an1_A Putative kinase; struct 29.9 47 0.0016 26.9 3.9 50 104-159 60-118 (292)
236 1tzj_A ACC deaminase, 1-aminoc 29.8 1.4E+02 0.0048 24.5 7.0 57 19-76 163-225 (338)
237 3guy_A Short-chain dehydrogena 29.8 54 0.0018 25.0 4.1 30 44-74 3-32 (230)
238 3l6e_A Oxidoreductase, short-c 29.8 69 0.0024 24.7 4.8 33 12-52 4-36 (235)
239 1eiw_A Hypothetical protein MT 29.8 82 0.0028 22.6 4.7 31 106-142 37-72 (111)
240 3tqt_A D-alanine--D-alanine li 29.7 35 0.0012 29.1 3.2 36 12-47 5-40 (372)
241 2uvd_A 3-oxoacyl-(acyl-carrier 29.7 1.2E+02 0.004 23.4 6.1 54 12-73 5-59 (246)
242 3i12_A D-alanine-D-alanine lig 29.6 32 0.0011 28.9 2.9 36 12-47 4-39 (364)
243 3e8x_A Putative NAD-dependent 29.4 79 0.0027 24.0 5.0 34 11-52 21-54 (236)
244 4gx0_A TRKA domain protein; me 29.2 2.7E+02 0.0092 24.5 9.1 91 34-134 341-433 (565)
245 1f4p_A Flavodoxin; electron tr 29.2 61 0.0021 22.9 4.0 31 13-46 2-32 (147)
246 1iy8_A Levodione reductase; ox 29.2 1.6E+02 0.0056 22.8 7.0 32 12-51 14-45 (267)
247 3dii_A Short-chain dehydrogena 29.2 1.9E+02 0.0067 22.1 7.7 28 45-73 5-32 (247)
248 1pqw_A Polyketide synthase; ro 29.2 99 0.0034 22.8 5.4 32 43-75 40-71 (198)
249 3ftp_A 3-oxoacyl-[acyl-carrier 29.2 85 0.0029 24.9 5.3 20 31-50 40-59 (270)
250 3ax6_A Phosphoribosylaminoimid 29.1 68 0.0023 26.6 4.9 28 11-47 1-28 (380)
251 1vl8_A Gluconate 5-dehydrogena 29.1 1.7E+02 0.0059 22.9 7.1 33 12-52 22-54 (267)
252 3l6e_A Oxidoreductase, short-c 29.1 58 0.002 25.2 4.2 30 44-74 5-34 (235)
253 4fn4_A Short chain dehydrogena 29.0 52 0.0018 26.6 4.0 30 43-73 8-37 (254)
254 3cxt_A Dehydrogenase with diff 28.9 1.4E+02 0.0048 23.9 6.6 54 12-73 35-88 (291)
255 2zat_A Dehydrogenase/reductase 28.9 1.3E+02 0.0044 23.3 6.2 33 12-52 15-47 (260)
256 2ehd_A Oxidoreductase, oxidore 28.7 59 0.002 24.7 4.1 33 7-47 1-33 (234)
257 2q1w_A Putative nucleotide sug 28.6 76 0.0026 25.5 5.0 31 10-48 20-50 (333)
258 3sc4_A Short chain dehydrogena 28.6 1.9E+02 0.0064 22.9 7.3 59 7-73 5-70 (285)
259 1ovy_A 50S ribosomal protein L 28.6 29 0.00098 25.6 2.1 39 29-67 71-117 (120)
260 3orf_A Dihydropteridine reduct 28.5 59 0.002 25.3 4.1 56 11-74 22-92 (251)
261 2q2v_A Beta-D-hydroxybutyrate 28.3 1.9E+02 0.0066 22.2 7.2 52 12-73 5-56 (255)
262 1yob_A Flavodoxin 2, flavodoxi 28.3 48 0.0017 24.7 3.5 36 12-47 89-125 (179)
263 3lyu_A Putative hydrogenase; t 28.2 40 0.0014 24.5 2.9 34 35-68 99-132 (142)
264 3t7c_A Carveol dehydrogenase; 28.2 1.8E+02 0.006 23.2 7.1 29 12-48 29-57 (299)
265 1sny_A Sniffer CG10964-PA; alp 28.1 54 0.0019 25.4 3.9 40 1-48 11-53 (267)
266 3e48_A Putative nucleoside-dip 28.0 2.1E+02 0.0071 22.1 8.1 72 45-119 3-77 (289)
267 1oc2_A DTDP-glucose 4,6-dehydr 28.0 65 0.0022 25.9 4.4 30 11-48 4-35 (348)
268 3end_A Light-independent proto 27.9 91 0.0031 24.9 5.3 37 8-48 38-74 (307)
269 3ai3_A NADPH-sorbose reductase 27.9 1.6E+02 0.0056 22.7 6.7 33 12-52 8-40 (263)
270 1pl8_A Human sorbitol dehydrog 27.9 1E+02 0.0035 25.4 5.7 83 43-128 173-263 (356)
271 3h7a_A Short chain dehydrogena 27.8 62 0.0021 25.3 4.2 31 43-74 8-38 (252)
272 3tsc_A Putative oxidoreductase 27.7 58 0.002 25.7 4.0 30 12-49 12-41 (277)
273 2fwm_X 2,3-dihydro-2,3-dihydro 27.7 59 0.002 25.2 4.0 28 45-73 10-37 (250)
274 3sx2_A Putative 3-ketoacyl-(ac 27.6 62 0.0021 25.5 4.2 30 43-73 14-43 (278)
275 3e5n_A D-alanine-D-alanine lig 27.6 36 0.0012 29.1 2.9 36 12-47 23-58 (386)
276 1fjh_A 3alpha-hydroxysteroid d 27.6 60 0.0021 25.0 4.0 29 45-74 4-32 (257)
277 2r7k_A 5-formaminoimidazole-4- 27.5 1.2E+02 0.0042 25.7 6.3 50 45-97 21-70 (361)
278 3ou5_A Serine hydroxymethyltra 27.5 26 0.00088 31.9 2.0 43 30-72 342-394 (490)
279 2fcr_A Flavodoxin; electron tr 27.5 36 0.0012 25.2 2.6 19 55-73 105-123 (173)
280 3afn_B Carbonyl reductase; alp 27.4 2E+02 0.0068 21.7 7.2 59 7-73 3-62 (258)
281 3vps_A TUNA, NAD-dependent epi 27.3 81 0.0028 24.7 4.8 31 10-48 6-36 (321)
282 1qyd_A Pinoresinol-lariciresin 27.2 66 0.0023 25.4 4.3 30 11-48 4-33 (313)
283 2k0z_A Uncharacterized protein 27.2 1.2E+02 0.0041 20.6 5.2 34 11-52 56-91 (110)
284 1e4e_A Vancomycin/teicoplanin 27.2 38 0.0013 28.0 2.9 37 12-48 4-40 (343)
285 3pxx_A Carveol dehydrogenase; 27.2 64 0.0022 25.3 4.1 30 43-73 11-40 (287)
286 2c1x_A UDP-glucose flavonoid 3 27.2 73 0.0025 27.6 4.8 95 35-142 261-368 (456)
287 3uve_A Carveol dehydrogenase ( 27.1 1.9E+02 0.0066 22.6 7.1 30 12-49 12-41 (286)
288 4fzr_A SSFS6; structural genom 27.1 65 0.0022 26.5 4.3 59 8-75 12-70 (398)
289 3rwb_A TPLDH, pyridoxal 4-dehy 27.1 61 0.0021 25.2 4.0 33 12-52 7-39 (247)
290 1iy8_A Levodione reductase; ox 27.1 61 0.0021 25.4 4.0 31 43-74 14-44 (267)
291 3o26_A Salutaridine reductase; 27.1 54 0.0018 25.8 3.7 13 107-119 91-103 (311)
292 3f9i_A 3-oxoacyl-[acyl-carrier 27.0 65 0.0022 24.8 4.1 36 9-52 12-47 (249)
293 1ehi_A LMDDL2, D-alanine:D-lac 27.0 66 0.0023 27.1 4.4 37 12-48 4-41 (377)
294 3bbo_Q Ribosomal protein L18; 27.0 28 0.00095 27.1 1.8 39 29-67 112-158 (161)
295 3m1a_A Putative dehydrogenase; 26.8 60 0.002 25.5 3.9 18 31-48 17-34 (281)
296 3un1_A Probable oxidoreductase 26.8 2.3E+02 0.0077 22.1 9.3 71 42-118 28-107 (260)
297 1xg5_A ARPG836; short chain de 26.7 2.3E+02 0.0077 22.1 7.9 65 1-73 22-88 (279)
298 1req_B Methylmalonyl-COA mutas 26.7 64 0.0022 30.2 4.5 48 25-74 520-567 (637)
299 1dhr_A Dihydropteridine reduct 26.7 64 0.0022 24.8 4.0 35 10-52 6-40 (241)
300 2obx_A DMRL synthase 1, 6,7-di 26.6 44 0.0015 25.7 2.9 52 106-157 69-127 (157)
301 1ydg_A Trp repressor binding p 26.5 1.1E+02 0.0039 22.9 5.4 33 11-46 6-38 (211)
302 2z04_A Phosphoribosylaminoimid 26.5 63 0.0021 26.6 4.1 29 11-48 1-29 (365)
303 2i87_A D-alanine-D-alanine lig 26.5 31 0.001 28.8 2.2 37 12-48 4-40 (364)
304 3hly_A Flavodoxin-like domain; 26.5 75 0.0026 23.3 4.2 60 13-77 2-62 (161)
305 2iuy_A Avigt4, glycosyltransfe 26.4 1.2E+02 0.0041 24.0 5.8 37 11-47 3-51 (342)
306 2ew8_A (S)-1-phenylethanol deh 26.3 65 0.0022 25.0 4.0 33 12-52 8-40 (249)
307 3e03_A Short chain dehydrogena 26.3 2.2E+02 0.0074 22.3 7.3 54 12-73 7-67 (274)
308 3bgk_A SMU.573, putative uncha 26.3 2.8E+02 0.0095 23.0 9.2 97 42-142 58-160 (311)
309 3j21_O 50S ribosomal protein L 26.3 56 0.0019 26.3 3.6 41 28-68 79-129 (203)
310 1f0y_A HCDH, L-3-hydroxyacyl-C 26.3 88 0.003 25.2 4.9 32 7-47 11-42 (302)
311 3r6w_A FMN-dependent NADH-azor 26.3 87 0.003 23.8 4.7 34 12-46 3-38 (212)
312 4eez_A Alcohol dehydrogenase 1 26.2 76 0.0026 25.9 4.6 83 43-128 165-253 (348)
313 3f1l_A Uncharacterized oxidore 26.2 69 0.0024 24.9 4.2 33 12-52 13-45 (252)
314 2ekp_A 2-deoxy-D-gluconate 3-d 26.1 66 0.0023 24.7 4.0 33 12-52 3-35 (239)
315 3tpc_A Short chain alcohol deh 26.0 66 0.0023 25.0 4.0 28 45-73 10-37 (257)
316 4fgs_A Probable dehydrogenase 26.0 63 0.0022 26.5 4.0 20 31-50 41-60 (273)
317 3oig_A Enoyl-[acyl-carrier-pro 26.0 2.3E+02 0.0077 21.8 8.9 104 12-134 8-125 (266)
318 3uxy_A Short-chain dehydrogena 26.0 2.4E+02 0.0081 22.1 7.9 30 43-73 29-58 (266)
319 2q62_A ARSH; alpha/beta, flavo 25.9 1.1E+02 0.0038 24.5 5.5 65 11-78 35-110 (247)
320 4fgs_A Probable dehydrogenase 25.8 1.6E+02 0.0056 23.9 6.5 30 43-73 30-59 (273)
321 2q5c_A NTRC family transcripti 25.8 1E+02 0.0034 23.9 5.0 56 12-73 95-166 (196)
322 4hp8_A 2-deoxy-D-gluconate 3-d 25.8 1.6E+02 0.0054 23.8 6.4 42 31-74 21-62 (247)
323 4eso_A Putative oxidoreductase 25.8 66 0.0023 25.2 4.0 33 12-52 9-41 (255)
324 1hdc_A 3-alpha, 20 beta-hydrox 25.8 67 0.0023 25.1 4.0 32 12-51 6-37 (254)
325 3v2h_A D-beta-hydroxybutyrate 25.8 2.4E+02 0.0084 22.2 8.0 32 12-51 26-57 (281)
326 4e6p_A Probable sorbitol dehyd 25.8 70 0.0024 24.9 4.1 32 12-51 9-40 (259)
327 1db3_A GDP-mannose 4,6-dehydra 25.8 91 0.0031 25.2 5.0 30 11-48 1-30 (372)
328 4gkb_A 3-oxoacyl-[acyl-carrier 25.7 65 0.0022 26.0 4.0 53 12-73 8-60 (258)
329 1di0_A Lumazine synthase; tran 25.7 38 0.0013 26.1 2.4 52 106-157 68-126 (158)
330 3tsc_A Putative oxidoreductase 25.6 2.2E+02 0.0074 22.3 7.1 30 43-73 12-41 (277)
331 4gx0_A TRKA domain protein; me 25.6 2.3E+02 0.008 24.9 8.0 93 42-142 127-222 (565)
332 4imr_A 3-oxoacyl-(acyl-carrier 25.6 55 0.0019 26.1 3.5 31 43-74 34-64 (275)
333 3lf2_A Short chain oxidoreduct 25.6 2.1E+02 0.0073 22.2 7.1 33 12-52 9-41 (265)
334 1ja9_A 4HNR, 1,3,6,8-tetrahydr 25.6 1.8E+02 0.0061 22.3 6.5 63 3-73 13-76 (274)
335 3zv4_A CIS-2,3-dihydrobiphenyl 25.5 2.4E+02 0.0083 22.1 7.5 33 12-52 6-38 (281)
336 3asu_A Short-chain dehydrogena 25.5 58 0.002 25.4 3.6 21 31-51 12-32 (248)
337 3uve_A Carveol dehydrogenase ( 25.4 72 0.0024 25.3 4.2 30 43-73 12-41 (286)
338 3c98_A Syntaxin-binding protei 25.3 87 0.003 28.4 5.1 53 109-163 548-600 (606)
339 4fu0_A D-alanine--D-alanine li 25.3 42 0.0015 28.0 2.9 36 12-47 4-39 (357)
340 2pvp_A D-alanine-D-alanine lig 25.3 57 0.0019 27.6 3.7 38 9-48 18-55 (367)
341 2x4g_A Nucleoside-diphosphate- 25.3 97 0.0033 24.7 5.0 29 12-48 14-42 (342)
342 3t7c_A Carveol dehydrogenase; 25.1 68 0.0023 25.8 4.0 30 43-73 29-58 (299)
343 1uls_A Putative 3-oxoacyl-acyl 25.1 71 0.0024 24.8 4.0 31 12-50 6-36 (245)
344 2bgk_A Rhizome secoisolaricire 25.1 1E+02 0.0036 23.8 5.0 31 12-50 17-47 (278)
345 1xq1_A Putative tropinone redu 25.1 1.6E+02 0.0054 22.7 6.1 54 12-73 15-68 (266)
346 3ppi_A 3-hydroxyacyl-COA dehyd 25.1 73 0.0025 25.1 4.1 20 31-50 42-61 (281)
347 1z0s_A Probable inorganic poly 25.0 80 0.0027 26.2 4.5 54 12-75 30-99 (278)
348 3ak4_A NADH-dependent quinucli 25.0 70 0.0024 24.9 4.0 32 12-51 13-44 (263)
349 3ai3_A NADPH-sorbose reductase 25.0 71 0.0024 24.9 4.0 30 44-74 9-38 (263)
350 3orq_A N5-carboxyaminoimidazol 25.0 2.3E+02 0.008 23.5 7.6 28 46-75 16-43 (377)
351 3v2g_A 3-oxoacyl-[acyl-carrier 24.9 73 0.0025 25.3 4.1 54 12-73 32-86 (271)
352 3zv4_A CIS-2,3-dihydrobiphenyl 24.9 73 0.0025 25.3 4.1 30 44-74 7-36 (281)
353 2ag5_A DHRS6, dehydrogenase/re 24.9 60 0.0021 25.1 3.5 20 31-50 18-37 (246)
354 3gqv_A Enoyl reductase; medium 24.8 2.6E+02 0.0088 23.1 7.8 82 44-128 167-252 (371)
355 2d1y_A Hypothetical protein TT 24.8 71 0.0024 24.9 4.0 31 12-50 7-37 (256)
356 2gdz_A NAD+-dependent 15-hydro 24.8 75 0.0026 24.8 4.1 32 12-51 8-39 (267)
357 3vtz_A Glucose 1-dehydrogenase 24.7 63 0.0021 25.6 3.7 28 45-73 17-44 (269)
358 3op4_A 3-oxoacyl-[acyl-carrier 24.7 64 0.0022 25.1 3.7 32 12-51 10-41 (248)
359 3gem_A Short chain dehydrogena 24.6 72 0.0025 25.2 4.0 30 43-73 28-57 (260)
360 3a28_C L-2.3-butanediol dehydr 24.6 63 0.0021 25.2 3.6 30 44-74 4-33 (258)
361 3uf0_A Short-chain dehydrogena 24.6 75 0.0026 25.3 4.1 28 45-73 34-61 (273)
362 2ae2_A Protein (tropinone redu 24.6 73 0.0025 24.8 4.0 30 44-74 11-40 (260)
363 4h15_A Short chain alcohol deh 24.6 59 0.002 26.2 3.5 29 44-73 13-41 (261)
364 1c41_A Lumazine synthase; ribo 30.4 16 0.00054 29.5 0.0 52 107-158 110-168 (200)
365 4da9_A Short-chain dehydrogena 24.5 75 0.0026 25.3 4.1 55 12-74 30-85 (280)
366 2a35_A Hypothetical protein PA 24.5 1.1E+02 0.0038 22.4 4.9 25 12-44 6-30 (215)
367 3kkj_A Amine oxidase, flavin-c 24.4 29 0.00099 25.1 1.5 17 45-61 5-21 (336)
368 1zmo_A Halohydrin dehalogenase 24.4 54 0.0018 25.4 3.2 30 12-49 2-31 (244)
369 3nyw_A Putative oxidoreductase 24.3 64 0.0022 25.2 3.6 32 12-51 8-39 (250)
370 2b4q_A Rhamnolipids biosynthes 24.3 76 0.0026 25.2 4.1 32 12-51 30-61 (276)
371 3ijr_A Oxidoreductase, short c 24.3 72 0.0024 25.6 4.0 54 12-73 48-102 (291)
372 3tl3_A Short-chain type dehydr 24.2 68 0.0023 24.9 3.8 28 45-73 12-39 (257)
373 3kvo_A Hydroxysteroid dehydrog 24.2 2.2E+02 0.0076 23.6 7.2 53 12-73 46-106 (346)
374 1ooe_A Dihydropteridine reduct 24.2 66 0.0022 24.6 3.6 28 45-73 6-33 (236)
375 3sju_A Keto reductase; short-c 24.2 77 0.0026 25.2 4.2 33 41-74 23-55 (279)
376 2cfc_A 2-(R)-hydroxypropyl-COM 24.1 1.1E+02 0.0037 23.3 4.9 30 10-47 1-30 (250)
377 2a4k_A 3-oxoacyl-[acyl carrier 24.1 74 0.0025 25.1 4.0 32 12-51 7-38 (263)
378 2nu8_A Succinyl-COA ligase [AD 24.1 66 0.0023 26.4 3.8 39 31-71 76-119 (288)
379 2h78_A Hibadh, 3-hydroxyisobut 24.1 75 0.0026 25.5 4.1 29 10-47 2-30 (302)
380 1gee_A Glucose 1-dehydrogenase 24.0 1.8E+02 0.006 22.3 6.2 54 12-73 8-62 (261)
381 3s55_A Putative short-chain de 24.0 74 0.0025 25.1 4.0 31 12-50 11-41 (281)
382 2zat_A Dehydrogenase/reductase 24.0 63 0.0022 25.1 3.5 31 43-74 15-45 (260)
383 2qq5_A DHRS1, dehydrogenase/re 24.0 63 0.0022 25.2 3.5 30 43-73 6-35 (260)
384 2x4g_A Nucleoside-diphosphate- 24.0 2.7E+02 0.0091 22.0 7.7 73 44-119 15-89 (342)
385 1yde_A Retinal dehydrogenase/r 23.9 74 0.0025 25.1 4.0 32 12-51 10-41 (270)
386 1ag9_A Flavodoxin; electron tr 23.9 42 0.0014 25.0 2.4 21 54-74 99-119 (175)
387 4hp8_A 2-deoxy-D-gluconate 3-d 23.9 49 0.0017 26.9 2.9 29 44-73 11-39 (247)
388 1o5i_A 3-oxoacyl-(acyl carrier 23.9 81 0.0028 24.5 4.2 31 43-74 20-50 (249)
389 1cyd_A Carbonyl reductase; sho 23.9 1.1E+02 0.0037 23.2 4.9 29 12-48 8-36 (244)
390 3uko_A Alcohol dehydrogenase c 23.9 96 0.0033 25.8 4.9 84 43-129 195-285 (378)
391 2z1n_A Dehydrogenase; reductas 23.9 76 0.0026 24.7 4.0 33 12-52 8-40 (260)
392 3v2h_A D-beta-hydroxybutyrate 23.9 78 0.0027 25.2 4.1 30 43-73 26-55 (281)
393 4gkb_A 3-oxoacyl-[acyl-carrier 23.9 1.7E+02 0.0057 23.5 6.2 29 44-73 9-37 (258)
394 3ppi_A 3-hydroxyacyl-COA dehyd 23.9 1.1E+02 0.0039 23.9 5.1 31 43-74 31-61 (281)
395 1vl8_A Gluconate 5-dehydrogena 23.9 75 0.0026 25.1 4.0 31 43-74 22-52 (267)
396 2ph1_A Nucleotide-binding prot 23.8 98 0.0033 24.2 4.7 35 11-48 18-52 (262)
397 3i1j_A Oxidoreductase, short c 23.8 69 0.0024 24.5 3.7 48 12-67 15-62 (247)
398 3m1a_A Putative dehydrogenase; 23.7 63 0.0022 25.4 3.5 30 44-74 7-36 (281)
399 2gas_A Isoflavone reductase; N 23.7 62 0.0021 25.5 3.5 11 11-21 2-12 (307)
400 3d40_A FOMA protein; fosfomyci 23.7 1.2E+02 0.0041 24.8 5.3 42 12-53 25-76 (286)
401 3ioy_A Short-chain dehydrogena 23.6 87 0.003 25.5 4.5 30 44-74 10-39 (319)
402 1mxh_A Pteridine reductase 2; 23.6 60 0.0021 25.4 3.4 31 43-74 12-42 (276)
403 3ucx_A Short chain dehydrogena 23.6 93 0.0032 24.3 4.5 31 43-74 12-42 (264)
404 3s55_A Putative short-chain de 23.6 2.6E+02 0.009 21.7 8.8 31 43-74 11-41 (281)
405 2pd6_A Estradiol 17-beta-dehyd 23.5 83 0.0029 24.2 4.1 33 12-52 8-40 (264)
406 2ekp_A 2-deoxy-D-gluconate 3-d 23.5 1E+02 0.0035 23.6 4.6 30 44-74 4-33 (239)
407 3c1o_A Eugenol synthase; pheny 23.5 76 0.0026 25.2 4.0 30 11-48 4-33 (321)
408 2f9z_C Protein (chemotaxis met 23.5 1.9E+02 0.0066 22.0 6.1 44 4-47 76-122 (159)
409 2dkn_A 3-alpha-hydroxysteroid 23.5 85 0.0029 23.7 4.1 29 45-74 4-32 (255)
410 1xu9_A Corticosteroid 11-beta- 23.5 68 0.0023 25.4 3.7 32 12-51 29-60 (286)
411 2nwq_A Probable short-chain de 23.5 66 0.0023 25.6 3.6 17 33-49 35-51 (272)
412 1sb8_A WBPP; epimerase, 4-epim 23.5 1.1E+02 0.0038 24.6 5.1 31 10-48 26-56 (352)
413 3lf2_A Short chain oxidoreduct 23.5 82 0.0028 24.7 4.1 31 43-74 9-39 (265)
414 1xu9_A Corticosteroid 11-beta- 23.5 2E+02 0.007 22.5 6.6 31 43-74 29-59 (286)
415 3u9l_A 3-oxoacyl-[acyl-carrier 23.5 1.6E+02 0.0053 24.2 6.0 59 7-73 1-64 (324)
416 1geg_A Acetoin reductase; SDR 23.5 79 0.0027 24.5 4.0 30 44-74 4-33 (256)
417 3pgx_A Carveol dehydrogenase; 23.4 82 0.0028 24.9 4.2 30 12-49 16-45 (280)
418 3s8m_A Enoyl-ACP reductase; ro 23.4 66 0.0022 28.5 3.8 29 44-73 63-92 (422)
419 3v8b_A Putative dehydrogenase, 23.4 81 0.0028 25.2 4.2 54 12-73 29-82 (283)
420 3ca8_A Protein YDCF; two domai 23.3 68 0.0023 26.3 3.7 23 106-128 35-58 (266)
421 3tzq_B Short-chain type dehydr 23.3 83 0.0028 24.8 4.1 31 12-50 12-42 (271)
422 3dhn_A NAD-dependent epimerase 23.3 2.3E+02 0.0078 20.9 8.7 35 10-52 3-37 (227)
423 4fc7_A Peroxisomal 2,4-dienoyl 23.3 82 0.0028 24.9 4.1 33 12-52 28-60 (277)
424 3q9l_A Septum site-determining 23.2 1.4E+02 0.0048 22.8 5.4 34 12-48 3-36 (260)
425 3tfo_A Putative 3-oxoacyl-(acy 23.2 70 0.0024 25.5 3.7 31 43-74 5-35 (264)
426 3svt_A Short-chain type dehydr 23.2 83 0.0028 24.8 4.1 32 12-51 12-43 (281)
427 2bgk_A Rhizome secoisolaricire 23.1 86 0.0029 24.3 4.2 31 43-74 17-47 (278)
428 3o38_A Short chain dehydrogena 23.1 1.6E+02 0.0055 22.7 5.8 64 12-82 23-86 (266)
429 3k5i_A Phosphoribosyl-aminoimi 23.1 3.4E+02 0.012 22.8 10.3 12 149-160 148-159 (403)
430 4b4o_A Epimerase family protei 23.1 83 0.0028 24.8 4.1 28 12-47 1-28 (298)
431 3dqp_A Oxidoreductase YLBE; al 23.1 2.3E+02 0.0079 20.9 7.5 33 12-52 1-33 (219)
432 1g3q_A MIND ATPase, cell divis 23.0 1.5E+02 0.0052 22.3 5.5 34 12-48 3-36 (237)
433 3rd5_A Mypaa.01249.C; ssgcid, 23.0 84 0.0029 25.0 4.2 33 12-52 17-49 (291)
434 1g0o_A Trihydroxynaphthalene r 22.9 63 0.0022 25.6 3.4 20 31-50 41-60 (283)
435 3e03_A Short chain dehydrogena 22.9 80 0.0027 24.9 4.0 31 43-74 7-37 (274)
436 3lwb_A D-alanine--D-alanine li 22.9 52 0.0018 27.9 3.0 36 12-47 11-46 (373)
437 2wsb_A Galactitol dehydrogenas 22.9 88 0.003 23.9 4.1 31 43-74 12-42 (254)
438 3f9i_A 3-oxoacyl-[acyl-carrier 22.8 63 0.0021 24.9 3.3 31 43-74 15-45 (249)
439 3hno_A Pyrophosphate-dependent 22.8 44 0.0015 29.6 2.6 34 41-74 3-43 (419)
440 1h5q_A NADP-dependent mannitol 22.8 1.1E+02 0.0036 23.5 4.6 39 1-47 4-42 (265)
441 1w6u_A 2,4-dienoyl-COA reducta 22.8 2.2E+02 0.0076 22.2 6.7 54 12-73 27-81 (302)
442 3l77_A Short-chain alcohol deh 22.8 85 0.0029 23.8 4.0 30 44-74 4-33 (235)
443 3ruf_A WBGU; rossmann fold, UD 22.8 77 0.0026 25.5 3.9 39 2-48 16-54 (351)
444 3edm_A Short chain dehydrogena 22.8 87 0.003 24.5 4.1 30 43-73 9-38 (259)
445 3rd5_A Mypaa.01249.C; ssgcid, 22.8 1.4E+02 0.0049 23.6 5.5 31 43-74 17-47 (291)
446 1f2d_A 1-aminocyclopropane-1-c 22.7 2.2E+02 0.0075 23.4 6.9 57 19-76 166-228 (341)
447 2wc1_A Flavodoxin; electron tr 22.7 54 0.0018 24.4 2.8 36 12-47 90-126 (182)
448 1yo6_A Putative carbonyl reduc 22.7 2.4E+02 0.0082 21.0 9.5 29 44-73 5-35 (250)
449 3ged_A Short-chain dehydrogena 22.7 2.7E+02 0.0094 22.1 7.2 50 12-73 3-52 (247)
450 3k3p_A D-alanine--D-alanine li 22.7 51 0.0018 28.2 2.9 36 12-47 38-73 (383)
451 4g81_D Putative hexonate dehyd 22.6 53 0.0018 26.6 2.9 29 44-73 11-39 (255)
452 3ksu_A 3-oxoacyl-acyl carrier 22.6 77 0.0026 24.9 3.8 30 43-73 12-41 (262)
453 1oi7_A Succinyl-COA synthetase 22.6 1E+02 0.0035 25.3 4.7 41 30-72 75-120 (288)
454 3n74_A 3-ketoacyl-(acyl-carrie 22.6 2.6E+02 0.0089 21.3 8.8 13 107-119 83-95 (261)
455 3vtz_A Glucose 1-dehydrogenase 22.6 89 0.003 24.7 4.2 33 9-49 12-44 (269)
456 4dqx_A Probable oxidoreductase 22.5 86 0.003 24.9 4.1 18 31-48 39-56 (277)
457 1nff_A Putative oxidoreductase 22.5 83 0.0028 24.6 4.0 32 12-51 8-39 (260)
458 2rhc_B Actinorhodin polyketide 22.5 87 0.003 24.8 4.1 31 43-74 23-53 (277)
459 3uce_A Dehydrogenase; rossmann 22.5 63 0.0021 24.6 3.2 31 12-50 7-37 (223)
460 4dqx_A Probable oxidoreductase 22.5 2.9E+02 0.0098 21.8 7.4 31 43-74 28-58 (277)
461 3ip1_A Alcohol dehydrogenase, 22.4 1.4E+02 0.0047 25.2 5.6 83 43-128 215-304 (404)
462 2ew2_A 2-dehydropantoate 2-red 22.4 76 0.0026 25.1 3.8 29 11-48 3-31 (316)
463 2o23_A HADH2 protein; HSD17B10 22.4 1.3E+02 0.0044 23.1 5.0 30 12-49 13-42 (265)
464 3qiv_A Short-chain dehydrogena 22.4 91 0.0031 24.0 4.1 31 43-74 10-40 (253)
465 3pk0_A Short-chain dehydrogena 22.4 66 0.0023 25.3 3.4 55 12-74 11-66 (262)
466 2x0d_A WSAF; GT4 family, trans 22.4 2.2E+02 0.0075 24.1 6.9 56 98-161 305-377 (413)
467 3n74_A 3-ketoacyl-(acyl-carrie 22.3 91 0.0031 24.1 4.1 53 11-74 9-61 (261)
468 3e9n_A Putative short-chain de 22.3 79 0.0027 24.3 3.8 30 12-50 6-35 (245)
469 4axs_A Carbamate kinase; oxido 22.2 47 0.0016 28.4 2.6 43 10-52 23-72 (332)
470 3zu3_A Putative reductase YPO4 22.2 69 0.0024 28.2 3.7 28 45-73 50-78 (405)
471 1zem_A Xylitol dehydrogenase; 22.2 86 0.0029 24.5 4.0 31 43-74 8-38 (262)
472 2o23_A HADH2 protein; HSD17B10 22.1 93 0.0032 23.9 4.1 31 43-74 13-43 (265)
473 2x6q_A Trehalose-synthase TRET 22.1 3E+02 0.01 22.3 7.6 52 101-161 309-377 (416)
474 3fpc_A NADP-dependent alcohol 22.1 59 0.002 26.8 3.1 84 43-129 168-257 (352)
475 1nff_A Putative oxidoreductase 22.1 1.1E+02 0.0038 23.9 4.6 31 43-74 8-38 (260)
476 3dii_A Short-chain dehydrogena 22.0 1.1E+02 0.0038 23.6 4.6 33 12-52 3-35 (247)
477 3gvc_A Oxidoreductase, probabl 22.0 80 0.0027 25.2 3.8 29 44-73 31-59 (277)
478 3rsc_A CALG2; TDP, enediyne, s 22.0 77 0.0026 26.1 3.8 40 9-52 18-57 (415)
479 2nm0_A Probable 3-oxacyl-(acyl 22.0 87 0.003 24.6 4.0 29 44-73 23-51 (253)
480 2x9g_A PTR1, pteridine reducta 22.0 1.7E+02 0.0058 23.1 5.8 54 12-73 24-79 (288)
481 3svt_A Short-chain type dehydr 22.0 2.9E+02 0.0098 21.6 7.6 31 43-74 12-42 (281)
482 2aef_A Calcium-gated potassium 21.9 48 0.0016 25.6 2.4 71 41-117 8-81 (234)
483 3r1i_A Short-chain type dehydr 21.9 91 0.0031 24.8 4.2 28 45-73 35-62 (276)
484 3imf_A Short chain dehydrogena 21.9 69 0.0024 25.0 3.4 30 44-74 8-37 (257)
485 3ftp_A 3-oxoacyl-[acyl-carrier 21.9 72 0.0025 25.3 3.5 31 43-74 29-59 (270)
486 2r60_A Glycosyl transferase, g 21.8 1.4E+02 0.0049 25.2 5.6 41 7-47 3-54 (499)
487 1ae1_A Tropinone reductase-I; 21.8 88 0.003 24.6 4.0 31 43-74 22-52 (273)
488 2gdz_A NAD+-dependent 15-hydro 21.8 1.1E+02 0.0039 23.7 4.6 30 44-74 9-38 (267)
489 2vzf_A NADH-dependent FMN redu 21.8 1.2E+02 0.004 22.8 4.6 65 11-78 2-81 (197)
490 1uzm_A 3-oxoacyl-[acyl-carrier 21.7 74 0.0025 24.7 3.5 28 45-73 18-45 (247)
491 1zmt_A Haloalcohol dehalogenas 21.7 69 0.0024 24.9 3.3 28 45-73 4-31 (254)
492 3k4o_A Isopentenyl phosphate k 21.7 92 0.0031 25.3 4.2 43 10-52 6-63 (266)
493 1iuk_A Hypothetical protein TT 21.7 83 0.0028 22.9 3.6 37 10-52 12-48 (140)
494 2nm0_A Probable 3-oxacyl-(acyl 21.6 1.3E+02 0.0043 23.6 4.9 32 11-50 21-52 (253)
495 2jjx_A Uridylate kinase, UMP k 21.6 1.7E+02 0.006 23.2 5.8 42 11-53 13-63 (255)
496 1uls_A Putative 3-oxoacyl-acyl 21.6 1.3E+02 0.0046 23.1 5.0 31 43-74 6-36 (245)
497 3is3_A 17BETA-hydroxysteroid d 21.5 79 0.0027 24.9 3.7 31 43-74 19-49 (270)
498 2jah_A Clavulanic acid dehydro 21.5 92 0.0031 24.1 4.0 31 43-74 8-38 (247)
499 2ew8_A (S)-1-phenylethanol deh 21.4 1.2E+02 0.004 23.4 4.6 31 43-74 8-38 (249)
500 3tjr_A Short chain dehydrogena 21.4 93 0.0032 25.0 4.1 31 43-74 32-62 (301)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=6e-50 Score=333.20 Aligned_cols=170 Identities=56% Similarity=1.009 Sum_probs=148.2
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCC
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVT 87 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~ 87 (184)
+++|++|||||||+.+.++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|+.+.+.|+.++.
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~ 85 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGET 85 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSC
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCCcEEEEechhcCccccccCC
Confidence 46788999999999988999999999999999999999999999889999999999999999999999988888999999
Q ss_pred CceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------------
Q 044681 88 LGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI------------------------- 142 (184)
Q Consensus 88 ~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl------------------------- 142 (184)
+++++++.+|++||++|+++||+||+||||+|||||||++|+|.|+|+|+|||++
T Consensus 86 ~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~ 165 (216)
T 1ydh_A 86 VGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKP 165 (216)
T ss_dssp CSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCH
T ss_pred CCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred ----EEEecCCHHHHHHHhhhhcCCCCCccccccccccc
Q 044681 143 ----IMVSASNAKELVQKLEDYEPSHDGVVAKAEWDAEK 177 (184)
Q Consensus 143 ----~i~~~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 177 (184)
.+++++|++|++++|++|++...+....++|..+.
T Consensus 166 ~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~ 204 (216)
T 1ydh_A 166 GARNIVVSAPTAKELMEKMEEYTPSHMHVASHESWKVEE 204 (216)
T ss_dssp HHHTTEEEESSHHHHHHHHHHCC----------------
T ss_pred HHcCeEEEeCCHHHHHHHHHHhcccccccccccccchhh
Confidence 57889999999999999999888888889998763
No 2
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=2.1e-48 Score=323.58 Aligned_cols=177 Identities=63% Similarity=1.103 Sum_probs=137.5
Q ss_pred Cccccc--cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcc
Q 044681 1 MEEKKE--AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRAL 78 (184)
Q Consensus 1 ~~~~~~--~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~ 78 (184)
||||-. .+++|++|||||||+..+++.|++.|++||+.||++|+.||||||+.|+|+++++||+++||+||||+|..+
T Consensus 1 ~~~~~~~~~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~GG~tiGVlP~~~ 80 (215)
T 2a33_A 1 MEIKGESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTL 80 (215)
T ss_dssp -------CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEESSC
T ss_pred CCccccccccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcCCcEEEEcchHh
Confidence 566544 245678999999999888888999999999999999999999999779999999999999999999999988
Q ss_pred ccccccCCCCceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE----------------
Q 044681 79 MKKELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------- 142 (184)
Q Consensus 79 ~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------- 142 (184)
.+.+..++.+++++++.+|++||++|+++||+||++|||+|||||+|++|+|.|+|+|+|||++
T Consensus 81 ~~~e~~~~~~~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~ 160 (215)
T 2a33_A 81 MPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDK 160 (215)
T ss_dssp C--------CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHH
T ss_pred cchhhccCCCCceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHH
Confidence 7777777888899999999999999999999999999999999999999999999999999998
Q ss_pred -------------EEEecCCHHHHHHHhhhhcCCCCCccccccccccc
Q 044681 143 -------------IMVSASNAKELVQKLEDYEPSHDGVVAKAEWDAEK 177 (184)
Q Consensus 143 -------------~i~~~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~ 177 (184)
.+++++|++|+++.|++|+++..++..+++|..+.
T Consensus 161 ~~~~Gfi~~~~~~~~~~~d~~ee~~~~l~~~~~~~~~~~~~~~~~~~~ 208 (215)
T 2a33_A 161 AVEEGFISPTAREIIVSAPTAKELVKKLEEYAPCHERVATKLCWEMER 208 (215)
T ss_dssp HHHHTSSCHHHHTTEEEESSHHHHHHHHHC------------------
T ss_pred HHHcCCCCHHHCCeEEEeCCHHHHHHHHHHhcCccccccccccccccc
Confidence 56789999999999999998888888889998764
No 3
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=5.9e-48 Score=315.59 Aligned_cols=133 Identities=32% Similarity=0.562 Sum_probs=126.6
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTL 88 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~ 88 (184)
...++|||||||+ +.++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|..+...+.+++++
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~ 89 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDA 89 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCC
Confidence 3447999999999 889999999999999999999999999998899999999999999999999999887778888888
Q ss_pred ceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 89 GEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 89 ~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
++++.+++|++||.+|+++||+||+||||+|||||+|++|+|.|+|+|+|||++
T Consensus 90 ~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvl 143 (189)
T 3sbx_A 90 DELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVV 143 (189)
T ss_dssp SEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEE
T ss_pred CeeEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEE
Confidence 999999999999999999999999999999999999999999999999999998
No 4
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=1.7e-47 Score=312.71 Aligned_cols=154 Identities=40% Similarity=0.808 Sum_probs=143.2
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCce
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGE 90 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~ 90 (184)
|++|||||||+.+.++.|++.|++||+.||++|+.||||||+.|+|+++++||+++||+||||+|..+.+.+.+++.+++
T Consensus 1 m~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~ 80 (191)
T 1t35_A 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTE 80 (191)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSE
T ss_pred CCEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCc
Confidence 57899999999988999999999999999999999999999889999999999999999999999988777778888888
Q ss_pred EeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE----------------------------
Q 044681 91 VKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------------------- 142 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------------------- 142 (184)
.+.+.+|++||++|+++||+||++|||+|||||+|++|+|.|+|+|+|||++
T Consensus 81 ~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~ 160 (191)
T 1t35_A 81 LIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHL 160 (191)
T ss_dssp EEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHH
T ss_pred cccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHc
Confidence 8889999999999999999999999999999999999999999999999999
Q ss_pred -EEEecCCHHHHHHHhhhhcCCC
Q 044681 143 -IMVSASNAKELVQKLEDYEPSH 164 (184)
Q Consensus 143 -~i~~~~~~~e~~~~l~~~~~~~ 164 (184)
.+.+++|++|+++.|++|.|+.
T Consensus 161 ~~~~~~~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 161 KLIHSSSRPDELIEQMQNYSYPI 183 (191)
T ss_dssp HHEEEESSHHHHHHHHHTC----
T ss_pred CeEEEeCCHHHHHHHHHHhcCCc
Confidence 4788999999999999998664
No 5
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=4.1e-47 Score=312.80 Aligned_cols=135 Identities=39% Similarity=0.697 Sum_probs=127.3
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCC
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGV 86 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~ 86 (184)
+++.+++|||||||+ +.++.|++.|++||++||++|+.||||||+.|+|+++++||+++||+||||+|..+...+.+++
T Consensus 18 ~~~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~ 96 (199)
T 3qua_A 18 GQDRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKALVHRELADV 96 (199)
T ss_dssp ---CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCT
T ss_pred ccCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEeCchhhhccccCC
Confidence 345668999999999 8899999999999999999999999999988999999999999999999999998877888888
Q ss_pred CCceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 87 TLGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 87 ~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.+++++++++|++||.+|+++|||||+||||+|||+|+|++|+|.|+|+|+|||++
T Consensus 97 ~~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvl 152 (199)
T 3qua_A 97 DAAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLIL 152 (199)
T ss_dssp TSSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEE
T ss_pred CCCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEE
Confidence 89999999999999999999999999999999999999999999999999999998
No 6
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=5.4e-44 Score=287.31 Aligned_cols=147 Identities=20% Similarity=0.296 Sum_probs=135.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcccccc-ccCCCCc
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKE-LTGVTLG 89 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e-~~~~~~~ 89 (184)
|++|||||||+.+.++.|++.|++||+.||++|++||||||+ |+|+++++||+++||+|+||+|..+.|.| .+++.++
T Consensus 1 m~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~ 79 (171)
T 1weh_A 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVD 79 (171)
T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCS
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCcEEEEeccccCcccccccCCCc
Confidence 578999999999989999999999999999999999999999 99999999999999999999998766766 4566677
Q ss_pred eEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCC-CCCCEEE---------------------EEEec
Q 044681 90 EVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGV-HNKPVAI---------------------IMVSA 147 (184)
Q Consensus 90 ~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~-~~kPvvl---------------------~i~~~ 147 (184)
+.+.+.+|++||++|+++||+||++|||+|||+|+|++|+|.|+|+ ++|| ++ .+.++
T Consensus 80 ~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~g~~~~l~~~~gfi~~~~~~~~~~~ 158 (171)
T 1weh_A 80 LELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVDPYWLGLLKAHGEIAPEDVGLLRVV 158 (171)
T ss_dssp EECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEECGGGGGTCCCBTTBCHHHHTTSEEC
T ss_pred eeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEECcchhhhHhhcCCCChhhcCeEEEe
Confidence 7788999999999999999999999999999999999999999997 6899 66 26788
Q ss_pred CCHHHHHHHhhh
Q 044681 148 SNAKELVQKLED 159 (184)
Q Consensus 148 ~~~~e~~~~l~~ 159 (184)
+||+|+++.+++
T Consensus 159 ~~~~e~~~~l~~ 170 (171)
T 1weh_A 159 ADEEDLRRFLRS 170 (171)
T ss_dssp CSHHHHHHHHHT
T ss_pred CCHHHHHHHHHh
Confidence 999999999875
No 7
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=9.7e-43 Score=289.87 Aligned_cols=151 Identities=27% Similarity=0.366 Sum_probs=133.7
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCce
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGE 90 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~ 90 (184)
+++|||||||+.+.++.|++.|++||+.||++|++||||||+ |+|+++++||+++||+||||+|.. ...+.+++.+++
T Consensus 37 ~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~-GiM~aa~~gAl~~gG~~iGV~~~~-P~~~~~~~~~t~ 114 (217)
T 1wek_A 37 VPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGGVSVGLNIEL-PHEQKPNPYQTH 114 (217)
T ss_dssp SCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTCCEEEEEECC-TTCCCCCSCCSE
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCCEEEEeeCC-cchhhccccCCc
Confidence 479999999999989999999999999999999999999997 999999999999999999997652 223455666777
Q ss_pred EeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCC-CCCCEEE---------------------------
Q 044681 91 VKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGV-HNKPVAI--------------------------- 142 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~-~~kPvvl--------------------------- 142 (184)
.+.+.+|++||++|+++||+||++|||+|||+|+|++|+|.|+|. ++|||++
T Consensus 115 ~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~~~w~~l~~~l~~~~~~Gfi~~~~~ 194 (217)
T 1wek_A 115 ALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDRGYWEGLVRWLAFLRDQKAVGPEDL 194 (217)
T ss_dssp EEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECHHHHHHHHHHHHHHHHTTSSCTTGG
T ss_pred CcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCcccchhHHHHHHHHHHCCCCCHHHc
Confidence 788899999999999999999999999999999999999999996 6799998
Q ss_pred -EEEecCCHHHHHHHhhhhcCC
Q 044681 143 -IMVSASNAKELVQKLEDYEPS 163 (184)
Q Consensus 143 -~i~~~~~~~e~~~~l~~~~~~ 163 (184)
.+.+++|++|+++.|++|+++
T Consensus 195 ~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 195 QLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp GGSEEESCHHHHHHHHHC----
T ss_pred CeEEEeCCHHHHHHHHHHhcCC
Confidence 467889999999999988754
No 8
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=6e-41 Score=301.72 Aligned_cols=153 Identities=20% Similarity=0.287 Sum_probs=141.4
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhc-------CCeEEEEecCcccc
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRG-------RRHVLGIIPRALMK 80 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~-------GG~viGviP~~~~~ 80 (184)
..+.++|||||||+. .+++|++.|++||++||++|+.||||||+ |+|+++++||..+ ||+||||+|..+..
T Consensus 143 p~r~~~IvV~cGSs~-~~p~yye~A~eLGr~LA~~G~~LVtGGG~-GLMeAa~aGA~~a~a~qr~aGG~vIGIiP~~L~~ 220 (462)
T 3gh1_A 143 PGATPNLVVCWGGHS-INEVEYQYTREVGHELGLRELNICTGCGP-GAMEGPMKGAAVGHAKQRYSEYRYLGLTEPSIIA 220 (462)
T ss_dssp TTCCSCEEEEECCSS-CCHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCTTCCEEEEECTTTTT
T ss_pred CCCCCCEEEEECCCC-CCHHHHHHHHHHHHHHHHCCCEEEeCCcH-HHHHHHHHHHHHhccccccCCCeEEEEccchhhh
Confidence 456789999999998 48999999999999999999999999997 9999999999886 99999999988777
Q ss_pred ccccCCCCceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhC---CCCCCEEE---------------
Q 044681 81 KELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLG---VHNKPVAI--------------- 142 (184)
Q Consensus 81 ~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg---~~~kPvvl--------------- 142 (184)
.|.+++.+++++++++|++||.+|++.|||||+||||+|||||||++|+|.|++ .++|||+|
T Consensus 221 ~E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~ 300 (462)
T 3gh1_A 221 AEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDK 300 (462)
T ss_dssp TSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHH
T ss_pred hhccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHHHH
Confidence 788888889999999999999999999999999999999999999999999888 78999999
Q ss_pred -------------EEEecCCHHHHHHHhhhhcC
Q 044681 143 -------------IMVSASNAKELVQKLEDYEP 162 (184)
Q Consensus 143 -------------~i~~~~~~~e~~~~l~~~~~ 162 (184)
.+++++|++|++++|++|++
T Consensus 301 fL~~~v~eg~~~~~~iv~DdpeEvl~~i~~~~~ 333 (462)
T 3gh1_A 301 FITDTLGEAARKHYSIAIDNPAEAARIMSNAMP 333 (462)
T ss_dssp HHHHHHCGGGGGGCEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHhhhhhhhccEEEcCCHHHHHHHHHHHHH
Confidence 56789999999999998763
No 9
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=8.5e-40 Score=295.48 Aligned_cols=150 Identities=19% Similarity=0.263 Sum_probs=134.3
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhc-------CCeEEEEecCccccc
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRG-------RRHVLGIIPRALMKK 81 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~-------GG~viGviP~~~~~~ 81 (184)
.++++|||||||+.. ++++|+.|++||++||++|+.||||||+ |+|+++++||..+ ||+||||+|..+.+.
T Consensus 142 ~~~~~ivVv~GSs~~-~~~~Ye~A~eLGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~ 219 (460)
T 3bq9_A 142 QEEPNMVVCWGGHSI-NEIEYKYTKDVGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAA 219 (460)
T ss_dssp TCCSCEEEEECCSSC-CHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTT
T ss_pred CCCCCEEEEEcCCCC-CCHHHHHHHHHHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCCEEEEEeChhhhhh
Confidence 455667777777765 6677799999999999999999999999 9998888888775 999999999988888
Q ss_pred cccCCCCceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCC---CCCCEEEE---------------
Q 044681 82 ELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGV---HNKPVAII--------------- 143 (184)
Q Consensus 82 e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~---~~kPvvl~--------------- 143 (184)
|.+++.+++++++++|++||.+|++.|||||+||||+|||+|+|++|+|.|+|. ++|||+++
T Consensus 220 E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~ 299 (460)
T 3bq9_A 220 EPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEF 299 (460)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHH
T ss_pred hhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHH
Confidence 888888999999999999999999999999999999999999999999999876 89999992
Q ss_pred -------------EEecCCHHHHHHHhhhh
Q 044681 144 -------------MVSASNAKELVQKLEDY 160 (184)
Q Consensus 144 -------------i~~~~~~~e~~~~l~~~ 160 (184)
+++++||+|+++.++++
T Consensus 300 l~~~l~~~~~~~~iiv~ddpeEal~~l~~~ 329 (460)
T 3bq9_A 300 IGATIGDEARQLYKIIIDDPAAVAQHMHAG 329 (460)
T ss_dssp HHHHTCTTGGGGCEEEESCHHHHHHHHHHH
T ss_pred HHHHhcchhhcCcEEEeCCHHHHHHHHHHH
Confidence 56789999999998763
No 10
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=100.00 E-value=5.2e-38 Score=257.78 Aligned_cols=144 Identities=27% Similarity=0.368 Sum_probs=122.3
Q ss_pred ccccCCceEEEEcCCCCCCCh----HHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccc
Q 044681 6 EAKSRFKRVCVFCGSSPDYKY----CYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKK 81 (184)
Q Consensus 6 ~~~~~~~~I~Vfggs~~~~~~----~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~ 81 (184)
.+.+.|++|||||||+. .++ .|++.|++||+.||++|++|||||+. |+|+++++||+++||.||||+|..
T Consensus 18 ~~~~~m~~IaV~Gss~~-~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~-GiM~aa~~gAl~~GG~~iGVlP~e---- 91 (195)
T 1rcu_A 18 YFQGHMKKVVVVGYSGP-VNKSPVSELRDICLELGRTLAKKGYLVFNGGRD-GVMELVSQGVREAGGTVVGILPDE---- 91 (195)
T ss_dssp -----CCEEEEEECCSC-TTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSS-HHHHHHHHHHHHTTCCEEEEESTT----
T ss_pred cccCCCCeEEEEecCCC-CCccccHHHHHHHHHHHHHHHHCCCEEEeCCHH-HHHHHHHHHHHHcCCcEEEEeCCc----
Confidence 34566789999999986 445 89999999999999999999999888 999999999999999999999972
Q ss_pred cccCCCCceEeec--CChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-----------------
Q 044681 82 ELTGVTLGEVKPV--DHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI----------------- 142 (184)
Q Consensus 82 e~~~~~~~~~~~~--~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl----------------- 142 (184)
...+.+.++.+. .+|++||++|+++||+||++|||+|||+|++++|++ +|||++
T Consensus 92 -~~~~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~------~kPV~lln~~g~w~~~l~~~~~~ 164 (195)
T 1rcu_A 92 -EAGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYAL------GKPVILLRGTGGWTDRISQVLID 164 (195)
T ss_dssp -CCCCTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHT------TCCEEEETTSCHHHHHGGGGCBT
T ss_pred -ccCCCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhc------CCCEEEECCCCccHHHHHHHHHc
Confidence 234455677665 699999999999999999999999999999999984 799998
Q ss_pred ----------EEEecCCHHHHHHHhhhhcC
Q 044681 143 ----------IMVSASNAKELVQKLEDYEP 162 (184)
Q Consensus 143 ----------~i~~~~~~~e~~~~l~~~~~ 162 (184)
.+.+++|++|++++|++|+.
T Consensus 165 G~fi~~~~~~~i~~~~~~ee~~~~l~~~~~ 194 (195)
T 1rcu_A 165 GKYLDNRRIVEIHQAWTVEEAVQIIEQILG 194 (195)
T ss_dssp TTBSSTTCCSCEEEESSHHHHHHHHHTC--
T ss_pred CCcCCHHHcCeEEEeCCHHHHHHHHHHHhc
Confidence 36788999999999988753
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=100.00 E-value=2.1e-38 Score=256.31 Aligned_cols=146 Identities=16% Similarity=0.192 Sum_probs=129.8
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCC
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVT 87 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~ 87 (184)
....++||||||++.+.++.|++.|++||+.||++|++|||||+..|+|+++++||+++||+||||+|.. ..+.+++.
T Consensus 10 ~~~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~gG~tigVlP~~--~~~~~~~~ 87 (176)
T 2iz6_A 10 SGRKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP--DTSEISDA 87 (176)
T ss_dssp -CCCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTTCCEEEEECC-------CCTT
T ss_pred cCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHcCCEEEEEeCch--hhhhhccC
Confidence 3445799999999977899999999999999999999999999933999999999999999999999976 44667777
Q ss_pred CceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-----------------EEEecCCH
Q 044681 88 LGEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-----------------IMVSASNA 150 (184)
Q Consensus 88 ~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-----------------~i~~~~~~ 150 (184)
+++++++.+|++||++|+++||+||++|||+|||+|++++|. ++|||++ .+.+++||
T Consensus 88 ~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~------~~kpV~~l~~~~~~~gfi~~~~~~~i~~~~~~ 161 (176)
T 2iz6_A 88 VDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALK------AKKPVVLLGTQPEAEKFFTSLDAGLVHVAADV 161 (176)
T ss_dssp CSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHH------TTCCEEEESCCHHHHHHHHHHCTTTEEEESSH
T ss_pred CceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHH------hCCcEEEEcCcccccccCChhhcCeEEEcCCH
Confidence 888888999999999999999999999999999999999993 4899998 57889999
Q ss_pred HHHHHHhhhhc
Q 044681 151 KELVQKLEDYE 161 (184)
Q Consensus 151 ~e~~~~l~~~~ 161 (184)
+|++++|++++
T Consensus 162 ~e~~~~l~~~~ 172 (176)
T 2iz6_A 162 AGAIAAVKQLL 172 (176)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 12
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=99.25 E-value=1.2e-10 Score=103.63 Aligned_cols=138 Identities=12% Similarity=0.095 Sum_probs=106.9
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcc---ccccc----
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRAL---MKKEL---- 83 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~---~~~e~---- 83 (184)
.+.|+|.|+.+.. +.-.+.|++|++.|+++|++||+|+-. |++.++.++|+++| +|+|++..+ +|.+.
T Consensus 127 ~~~vAIVGsR~~s--~yG~~~a~~l~~~La~~g~~VVSGlA~-GID~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~ 201 (382)
T 3maj_A 127 RPMIAIVGSRNAS--GAGLKFAGQLAADLGAAGFVVISGLAR-GIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLL 201 (382)
T ss_dssp SCEEEEECCSSCC--HHHHHHHHHHHHHHHHHTCEEEECCCT-THHHHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHH
T ss_pred CceEEEEeCCCCC--HHHHHHHHHHHHHHHHCCcEEEeCCcc-CHHHHHHHHHHhCC--eEEEECCCcCccCCHhhHHHH
Confidence 3689999987763 333788999999999999999999998 99999999999987 999998654 22221
Q ss_pred ----cCCCC-------ceEeecCChHHHHHHHHHhCCEEEEecCc--cccHHHHHHHHHHHHhCCCCCCEEE--------
Q 044681 84 ----TGVTL-------GEVKPVDHMHQRKAEMARYADCFIVLPGG--FGTLEKLFEVTTWSQLGVHNKPVAI-------- 142 (184)
Q Consensus 84 ----~~~~~-------~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG--~GTL~El~~~l~~~qlg~~~kPvvl-------- 142 (184)
..+.+ ..-....+|..||+++...||++||+-.+ .|||...-.++.+ +|||..
T Consensus 202 ~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGsliTA~~Ale~------gR~VfavPG~i~~~ 275 (382)
T 3maj_A 202 LDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQ------GREVFAVPGSPLDP 275 (382)
T ss_dssp HHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCTTCTHHHHHHHHHHH------TCCEEECCCCTTCG
T ss_pred HHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCCCCcHHHHHHHHHHh------CCcEEEEcCCCCCc
Confidence 11111 11112356899999999999999999877 7999999888876 788876
Q ss_pred -----------EEEecCCHHHHHHHhhh
Q 044681 143 -----------IMVSASNAKELVQKLED 159 (184)
Q Consensus 143 -----------~i~~~~~~~e~~~~l~~ 159 (184)
.-..+.+++++++.+..
T Consensus 276 ~s~G~n~LI~~GA~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 276 RAAGTNDLIKQGATLITSASDIVEAVAS 303 (382)
T ss_dssp GGHHHHHHHHTTCEECSSHHHHHHHHTT
T ss_pred ccccHHHHHHCCCEEECCHHHHHHHhhh
Confidence 23346789999998864
No 13
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=99.10 E-value=1.1e-09 Score=94.17 Aligned_cols=122 Identities=18% Similarity=0.093 Sum_probs=93.2
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccc---ccccc---
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALM---KKELT--- 84 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~---~~e~~--- 84 (184)
.+.|+|.|+.++ ++.-.+.|+++++.|+ ++++||+|+.. |+-.++.++|+++||.+|+|++..+. |.+..
T Consensus 106 ~~~vaIVGsR~~--s~yg~~~a~~l~~~La-~~~~VVSGlA~-GID~~AH~~aL~~~g~TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRAC--SKQGAKSVEKVIQGLE-NELVIVSGLAK-GIDTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTC--CHHHHHHHHHHHHTTT-TCSEEEECCCT-THHHHHHHHHHHHTCCEEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCC--CHHHHHHHHHHHHHHh-hhheEecCccc-CHHHHHHHHHHhcCCCEEEEecccccccCchhhHHHH
Confidence 468999998775 3444789999999996 68999999998 99999999999999999999986542 22100
Q ss_pred -----------CCCCceEeecCChHHHHHHHHHhCCEEEEecCc--cccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 85 -----------GVTLGEVKPVDHMHQRKAEMARYADCFIVLPGG--FGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 85 -----------~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG--~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.-+...-.....|..||+++...||++||+--+ .|||.=.-.++.+ +|||..
T Consensus 182 ~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsliTA~~Ale~------gR~Vfa 246 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAMEE------GRDVFA 246 (288)
T ss_dssp HHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCTTCHHHHHHHHHHHT------TCEEEE
T ss_pred HHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCCCChHHHHHHHHHHc------CCeEEE
Confidence 001112233467899999999999999999865 7888766666654 778765
No 14
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.73 E-value=0.0018 Score=51.68 Aligned_cols=141 Identities=14% Similarity=0.047 Sum_probs=85.2
Q ss_pred CCceEEEEcCCCCC------CChHHHHHHH----HHHHHHHHCCC-eEEEcCCCcchhHHHHHHHHh-----cCCeEEEE
Q 044681 10 RFKRVCVFCGSSPD------YKYCYRKAAI----DLGNELVSKGL-DLVYGGGNVGLMGLISEEVHR-----GRRHVLGI 73 (184)
Q Consensus 10 ~~~~I~Vfggs~~~------~~~~~~~~A~----~lG~~LA~~G~-~lV~GGg~~GlM~a~a~ga~~-----~GG~viGv 73 (184)
.|++|+|-|..... .++.....-. +|-+++ +.|+ .+++||-. |+--.+++.|++ .+.+++-|
T Consensus 1 ~m~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~-G~D~~aae~vl~lk~~y~~i~L~~v 78 (181)
T 2nx2_A 1 SLKVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQL-GVELWAAEAAYDLQEEYPDLKVAVI 78 (181)
T ss_dssp CCCEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCT-THHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred CceEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCc-cHHHHHHHHHHHhccccCCceEEEE
Confidence 36899999976543 1333322233 334434 4685 66777776 999999999999 45788888
Q ss_pred ecCccccccccC----------CCCceEee---c-----CChHHHHHHHHHhCCEEEEec-Ccc--ccHHHHHHHHHHHH
Q 044681 74 IPRALMKKELTG----------VTLGEVKP---V-----DHMHQRKAEMARYADCFIVLP-GGF--GTLEKLFEVTTWSQ 132 (184)
Q Consensus 74 iP~~~~~~e~~~----------~~~~~~~~---~-----~~~~~Rk~~m~~~sDa~IvlP-GG~--GTL~El~~~l~~~q 132 (184)
+|-......+.. ...+.+.. . ..+..|++.|+++||.+|++- |.. ||-.=+-.+....+
T Consensus 79 ~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~ 158 (181)
T 2nx2_A 79 TPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRRE 158 (181)
T ss_dssp ESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHH
T ss_pred ecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcc
Confidence 883322211110 00112121 1 236799999999999999998 433 67655554444321
Q ss_pred hCCCCCCEEEEEEecCCHHHHHHHhhh
Q 044681 133 LGVHNKPVAIIMVSASNAKELVQKLED 159 (184)
Q Consensus 133 lg~~~kPvvl~i~~~~~~~e~~~~l~~ 159 (184)
.+++||.++ +++++-+.+++
T Consensus 159 --~~~~pv~~I-----~~~~l~~~~~~ 178 (181)
T 2nx2_A 159 --QDGYPIYFI-----TMDDLRVTVEE 178 (181)
T ss_dssp --HHCCCEEEE-----CHHHHHHHHHC
T ss_pred --ccCCeEEEE-----cHHHHHHHHhc
Confidence 237898652 57777666653
No 15
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=97.41 E-value=0.0041 Score=48.98 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=73.6
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcccccccc-CCCC-ceEeecCChHHHHHHHHHhCCEEEEec-CccccH
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELT-GVTL-GEVKPVDHMHQRKAEMARYADCFIVLP-GGFGTL 121 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~-~~~~-~~~~~~~~~~~Rk~~m~~~sDa~IvlP-GG~GTL 121 (184)
.||+||-. |+-.|+-+.|+++|=..-|..|......+-+ +..| .......++..|....++.||+.++|- |..-.=
T Consensus 10 kIiSGGQT-GvDraALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGG 88 (158)
T 3imk_A 10 KIISGGQT-GADRAALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGG 88 (158)
T ss_dssp EEECCCCT-THHHHHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHH
T ss_pred EEeeCCcc-hHHHHHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCc
Confidence 57777765 9999999999999988889999765433321 2222 222335788999999999999988887 655333
Q ss_pred HHHHHHHHHHHhCCCCCCEEEEEEec----CCHHHHHHHhhhh
Q 044681 122 EKLFEVTTWSQLGVHNKPVAIIMVSA----SNAKELVQKLEDY 160 (184)
Q Consensus 122 ~El~~~l~~~qlg~~~kPvvl~i~~~----~~~~e~~~~l~~~ 160 (184)
.++...++. .+.||+.+.-... ..++.+.+||.++
T Consensus 89 T~lT~~~a~----~~~KP~l~i~l~~~~~~~~~~~v~~wl~~~ 127 (158)
T 3imk_A 89 SALTEFFAE----QYKKPCLHIDLDRISIEDAATLINSWTVSH 127 (158)
T ss_dssp HHHHHHHHH----HTTCCEEEEETTTSCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHH----HhCCCEEEEecccccccchHHHHHHHHHHC
Confidence 344444443 3589987632221 2245556666654
No 16
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=95.06 E-value=0.33 Score=36.10 Aligned_cols=41 Identities=17% Similarity=0.248 Sum_probs=25.5
Q ss_pred EeecCChHHHHHHHH-HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 91 VKPVDHMHQRKAEMA-RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~-~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
+.+...+.. ..+|. ..||+||- .||.+|+.|.. . +++|+++
T Consensus 70 v~~~~~~~~-~~~l~~~~ad~~I~-~~G~~t~~Ea~---~------~G~P~i~ 111 (170)
T 2o6l_A 70 TRLYKWIPQ-NDLLGHPKTRAFIT-HGGANGIYEAI---Y------HGIPMVG 111 (170)
T ss_dssp EEEESSCCH-HHHHTSTTEEEEEE-CCCHHHHHHHH---H------HTCCEEE
T ss_pred EEEecCCCH-HHHhcCCCcCEEEE-cCCccHHHHHH---H------cCCCEEe
Confidence 334444433 33332 66787775 78889988754 3 2789988
No 17
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=94.47 E-value=0.11 Score=40.68 Aligned_cols=41 Identities=17% Similarity=0.151 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHhCCEEEEe-cCc---cccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 96 HMHQRKAEMARYADCFIVL-PGG---FGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 96 ~~~~Rk~~m~~~sDa~Ivl-PGG---~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
....+....++.||++|++ .|. .||.-|+-.++.+ +|||++
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a~------gkPVi~ 102 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYAK------GIPVVA 102 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHHT------TCCEEE
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHC------CCEEEE
Confidence 4578888889999998886 554 8999999999986 899988
No 18
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=94.24 E-value=0.1 Score=40.46 Aligned_cols=40 Identities=18% Similarity=0.239 Sum_probs=35.0
Q ss_pred hHHHHHHHHHhCCEEEEecC--ccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 97 MHQRKAEMARYADCFIVLPG--GFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 97 ~~~Rk~~m~~~sDa~IvlPG--G~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
...|...+++.||++|++.+ ..||.-|+..++.+ +|||++
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~al------gKPVi~ 108 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILC 108 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------CSSEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHHC------CCEEEE
Confidence 46788889999999999975 68999999999987 889987
No 19
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=93.94 E-value=0.47 Score=40.32 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=53.1
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHH-HHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNEL-VSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTL 88 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~L-A~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~ 88 (184)
..+.|.|+|||.. ... ..+...+.-..+ .+.++.++..+|. +-.+...+...+.+..+ -+
T Consensus 179 ~~~~ilv~gGs~g-~~~-~~~~~~~al~~l~~~~~~~vi~~~G~-~~~~~~~~~~~~~~~~~-~v--------------- 239 (365)
T 3s2u_A 179 RRVNLLVLGGSLG-AEP-LNKLLPEALAQVPLEIRPAIRHQAGR-QHAEITAERYRTVAVEA-DV--------------- 239 (365)
T ss_dssp SCCEEEECCTTTT-CSH-HHHHHHHHHHTSCTTTCCEEEEECCT-TTHHHHHHHHHHTTCCC-EE---------------
T ss_pred CCcEEEEECCcCC-ccc-cchhhHHHHHhcccccceEEEEecCc-cccccccceeccccccc-cc---------------
Confidence 4468899988763 232 223333322222 2346777766666 55555544443333211 01
Q ss_pred ceEeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 89 GEVKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 89 ~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
...+++|. -++..||.+|. -+|.+|+.|+. .. ++|+|+
T Consensus 240 --~~f~~dm~----~~l~~aDlvI~-raG~~Tv~E~~---a~------G~P~Il 277 (365)
T 3s2u_A 240 --APFISDMA----AAYAWADLVIC-RAGALTVSELT---AA------GLPAFL 277 (365)
T ss_dssp --ESCCSCHH----HHHHHCSEEEE-CCCHHHHHHHH---HH------TCCEEE
T ss_pred --ccchhhhh----hhhccceEEEe-cCCcchHHHHH---Hh------CCCeEE
Confidence 11124443 35578998774 56689987754 33 789887
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.38 E-value=1 Score=37.62 Aligned_cols=50 Identities=14% Similarity=-0.003 Sum_probs=33.4
Q ss_pred HHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec-C--CHHHHHHHhhh
Q 044681 102 AEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA-S--NAKELVQKLED 159 (184)
Q Consensus 102 ~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~-~--~~~e~~~~l~~ 159 (184)
.-++..||+|| .+||.+|+.|. +.. ++|+++ .+.+. + |++++.+.|.+
T Consensus 303 ~~~l~~ad~~v-~~~g~~t~~Ea---~a~------G~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ 372 (412)
T 3otg_A 303 AALLPHVDLVV-HHGGSGTTLGA---LGA------GVPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKR 372 (412)
T ss_dssp HHHGGGCSEEE-ESCCHHHHHHH---HHH------TCCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHhcCcEEE-ECCchHHHHHH---HHh------CCCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHH
Confidence 34567799876 78888887664 443 899987 22222 2 77888777776
Q ss_pred hc
Q 044681 160 YE 161 (184)
Q Consensus 160 ~~ 161 (184)
..
T Consensus 373 ll 374 (412)
T 3otg_A 373 LL 374 (412)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 21
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=92.33 E-value=0.18 Score=39.09 Aligned_cols=42 Identities=12% Similarity=-0.048 Sum_probs=36.1
Q ss_pred ChHHHHHHHHHhCCEEEEecCc----cccHHHHHHHHHHHHhCCCCCCEEEE
Q 044681 96 HMHQRKAEMARYADCFIVLPGG----FGTLEKLFEVTTWSQLGVHNKPVAII 143 (184)
Q Consensus 96 ~~~~Rk~~m~~~sDa~IvlPGG----~GTL~El~~~l~~~qlg~~~kPvvl~ 143 (184)
....+....++.||++|++.-| .||.-|+-.++.+ +|||+++
T Consensus 67 ~I~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A~------gkPVv~~ 112 (157)
T 1f8y_A 67 ATYNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALSQ------GKYVLLV 112 (157)
T ss_dssp HHHHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHHT------TCEEEEE
T ss_pred HHHHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHHC------CCeEEEE
Confidence 3478888889999999999855 8999999999987 8999763
No 22
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=91.85 E-value=0.44 Score=36.98 Aligned_cols=41 Identities=17% Similarity=0.231 Sum_probs=35.9
Q ss_pred ChHHHHHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 96 HMHQRKAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 96 ~~~~Rk~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
....|..-+++.||++|+.. =..||.-|+..++.+ +|||++
T Consensus 57 ~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~al------gkPV~~ 99 (152)
T 4fyk_A 57 FIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVAL------GKPILC 99 (152)
T ss_dssp HHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHHT------TCCEEE
T ss_pred HHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHHc------CCeEEE
Confidence 45789999999999999985 368999999999986 899988
No 23
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=91.06 E-value=3.6 Score=34.41 Aligned_cols=49 Identities=18% Similarity=0.328 Sum_probs=32.5
Q ss_pred HHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec-C--CHHHHHHHhhhh
Q 044681 103 EMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA-S--NAKELVQKLEDY 160 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~-~--~~~e~~~~l~~~ 160 (184)
.++..||++| ..||.||+.|.. . .++|+++ .+... + |++++.+.+.+.
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 378 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---Y------WGRPLVVVPQSFDVQPMARRVDQLGLGAVLPGEKADGDTLLAAVGAV 378 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---H------TTCCEEECCCSGGGHHHHHHHHHHTCEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---H------hCCCEEEeCCcchHHHHHHHHHHcCCEEEcccCCCCHHHHHHHHHHH
Confidence 4557799855 678889976643 3 4899988 22222 1 677777777765
Q ss_pred c
Q 044681 161 E 161 (184)
Q Consensus 161 ~ 161 (184)
.
T Consensus 379 l 379 (415)
T 3rsc_A 379 A 379 (415)
T ss_dssp H
T ss_pred H
Confidence 4
No 24
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=89.17 E-value=5.9 Score=33.58 Aligned_cols=86 Identities=15% Similarity=0.069 Sum_probs=48.8
Q ss_pred CCCeEEEcCCC---cchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHhCCEEEEecCcc
Q 044681 42 KGLDLVYGGGN---VGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGF 118 (184)
Q Consensus 42 ~G~~lV~GGg~---~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~ 118 (184)
....+|++|+. ..++..+.+...+.+-+++=....... +.. +....+.+.+.... .. ++..+|+|| -.||.
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~--~~~-~~~~~v~~~~~~~~-~~-ll~~~d~~v-~~gG~ 294 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGL--GRI-DEGDDCLVVGEVNH-QV-LFGRVAAVV-HHGGA 294 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTC--CCS-SCCTTEEEESSCCH-HH-HGGGSSEEE-ECCCH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCccc--ccc-cCCCCEEEecCCCH-HH-HHhhCcEEE-ECCcH
Confidence 56677777764 235777777766666666554321111 111 11123444444433 33 447899876 66778
Q ss_pred ccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 119 GTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 119 GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
||..|.. . +++|+++
T Consensus 295 ~t~~Eal---~------~GvP~v~ 309 (404)
T 3h4t_A 295 GTTTAVT---R------AGAPQVV 309 (404)
T ss_dssp HHHHHHH---H------HTCCEEE
T ss_pred HHHHHHH---H------cCCCEEE
Confidence 9977654 3 3899988
No 25
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=89.16 E-value=4.5 Score=34.27 Aligned_cols=109 Identities=13% Similarity=0.025 Sum_probs=59.6
Q ss_pred HHHHH-CCCeEEEcCCC---cchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHhCCEEE
Q 044681 37 NELVS-KGLDLVYGGGN---VGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARYADCFI 112 (184)
Q Consensus 37 ~~LA~-~G~~lV~GGg~---~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~I 112 (184)
++|.+ ....+|++|+. ..+.+.+.++..+.+-+++-++..... +. ...-..+.+...... ..+ +..+|+||
T Consensus 232 ~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--~~-~~~~~~v~~~~~~~~-~~~-l~~~d~~v 306 (415)
T 1iir_A 232 AFLDAGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADL--VL-PDDGADCFAIGEVNH-QVL-FGRVAAVI 306 (415)
T ss_dssp HHHHTSSCCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTC--CC-SSCGGGEEECSSCCH-HHH-GGGSSEEE
T ss_pred HHHhhCCCeEEEeCCCCCCcHHHHHHHHHHHHHCCCeEEEEeCCCcc--cc-cCCCCCEEEeCcCCh-HHH-HhhCCEEE
Confidence 44533 45677887775 123455556555556555544321111 10 111123444444443 344 48999988
Q ss_pred EecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec---CCHHHHHHHhhhh
Q 044681 113 VLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA---SNAKELVQKLEDY 160 (184)
Q Consensus 113 vlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~---~~~~e~~~~l~~~ 160 (184)
- .||.||+.|.. . +++|+++ .+... -+++++.+.|++.
T Consensus 307 ~-~~G~~t~~Ea~---~------~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 366 (415)
T 1iir_A 307 H-HGGAGTTHVAA---R------AGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATA 366 (415)
T ss_dssp E-CCCHHHHHHHH---H------HTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHH
T ss_pred e-CCChhHHHHHH---H------cCCCEEECCCCCccHHHHHHHHHCCCcccCCcCCCCHHHHHHHHHHH
Confidence 6 78889977754 3 3899988 23322 2677887777766
No 26
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=88.34 E-value=0.69 Score=35.95 Aligned_cols=41 Identities=24% Similarity=0.252 Sum_probs=34.9
Q ss_pred ChHHHHHHHHHhCCEEEEe--c-----CccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 96 HMHQRKAEMARYADCFIVL--P-----GGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 96 ~~~~Rk~~m~~~sDa~Ivl--P-----GG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
....+....++.||++|++ | =-.||.-|+-.++.+ +|||++
T Consensus 56 ~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~Al------gKPVi~ 103 (161)
T 2f62_A 56 DIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAAL------NKMVLT 103 (161)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHT------TCEEEE
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHHC------CCEEEE
Confidence 4567888999999999999 4 357999999999987 899986
No 27
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=88.23 E-value=9 Score=32.29 Aligned_cols=110 Identities=15% Similarity=0.051 Sum_probs=60.3
Q ss_pred HHHHHHH-CCCeEEEcCCCcc------hhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHh
Q 044681 35 LGNELVS-KGLDLVYGGGNVG------LMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARY 107 (184)
Q Consensus 35 lG~~LA~-~G~~lV~GGg~~G------lM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~ 107 (184)
+-++|.+ ....+|++|+. + .+..+.++..+.+-+++=++.......+ +....+.+.+.... ..+ +..
T Consensus 229 ~~~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~---~~~~~v~~~~~~~~-~~l-l~~ 302 (416)
T 1rrv_A 229 LEAFLAAGSPPVHIGFGSS-SGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLP---DDRDDCFAIDEVNF-QAL-FRR 302 (416)
T ss_dssp HHHHHHSSSCCEEECCTTC-CSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCS---CCCTTEEEESSCCH-HHH-GGG
T ss_pred HHHHHhcCCCeEEEecCCC-CccChHHHHHHHHHHHHHCCCeEEEEeCCcccccc---CCCCCEEEeccCCh-HHH-hcc
Confidence 3344533 35667777765 4 3455556555556565544322111101 11112334333332 334 489
Q ss_pred CCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec---CCHHHHHHHhhhh
Q 044681 108 ADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA---SNAKELVQKLEDY 160 (184)
Q Consensus 108 sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~---~~~~e~~~~l~~~ 160 (184)
+|+||- .||.||+.|... +++|+++ .+... -+++++.+.|++.
T Consensus 303 ~d~~v~-~~G~~t~~Ea~~---------~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l 367 (416)
T 1rrv_A 303 VAAVIH-HGSAGTEHVATR---------AGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV 367 (416)
T ss_dssp SSEEEE-CCCHHHHHHHHH---------HTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH
T ss_pred CCEEEe-cCChhHHHHHHH---------cCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh
Confidence 999887 788899877543 3799988 22222 3677777777766
No 28
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=87.42 E-value=7.6 Score=32.72 Aligned_cols=48 Identities=17% Similarity=0.219 Sum_probs=32.1
Q ss_pred HHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec---CCHHHHHHHhhhhc
Q 044681 104 MARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA---SNAKELVQKLEDYE 161 (184)
Q Consensus 104 m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~---~~~~e~~~~l~~~~ 161 (184)
++.++|+|| ..||.||+.|.. . +++|+++ .+... -+++++.+.|++..
T Consensus 318 ~l~~~d~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll 387 (424)
T 2iya_A 318 ILTKASAFI-THAGMGSTMEAL---S------NAVPMVAVPQIAEQTMNAERIVELGLGRHIPRDQVTAEKLREAVLAVA 387 (424)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCCSHHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHHHH
T ss_pred HHhhCCEEE-ECCchhHHHHHH---H------cCCCEEEecCccchHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHH
Confidence 567899765 578889977754 2 4899988 22222 16777777777653
No 29
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=86.85 E-value=7.8 Score=32.00 Aligned_cols=29 Identities=14% Similarity=0.091 Sum_probs=21.8
Q ss_pred HHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 104 MARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 104 m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
++..+|+||. .||.||+.|.. . .++|+++
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~v~ 304 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---S------AGVPQLL 304 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---H------TTCCEEE
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---H------hCCCEEE
Confidence 3488998886 78889976644 3 4899988
No 30
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=85.86 E-value=4.1 Score=34.81 Aligned_cols=59 Identities=17% Similarity=0.227 Sum_probs=38.0
Q ss_pred EeecCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec-C--
Q 044681 91 VKPVDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA-S-- 148 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~-~-- 148 (184)
+.+...... .. ++..+|+||. .||.||+.|.. . +++|+++ .+.+. +
T Consensus 321 v~~~~~~~~-~~-ll~~ad~~V~-~~G~~t~~Ea~---~------~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~ 388 (441)
T 2yjn_A 321 VRTVGFVPM-HA-LLPTCAATVH-HGGPGSWHTAA---I------HGVPQVILPDGWDTGVRAQRTQEFGAGIALPVPEL 388 (441)
T ss_dssp EEECCSCCH-HH-HGGGCSEEEE-CCCHHHHHHHH---H------TTCCEEECCCSHHHHHHHHHHHHHTSEEECCTTTC
T ss_pred EEEecCCCH-HH-HHhhCCEEEE-CCCHHHHHHHH---H------hCCCEEEeCCcccHHHHHHHHHHcCCEEEcccccC
Confidence 444444443 33 4589999886 78899977754 3 4899998 23322 2
Q ss_pred CHHHHHHHhhhhc
Q 044681 149 NAKELVQKLEDYE 161 (184)
Q Consensus 149 ~~~e~~~~l~~~~ 161 (184)
|++++.+.|++..
T Consensus 389 ~~~~l~~~i~~ll 401 (441)
T 2yjn_A 389 TPDQLRESVKRVL 401 (441)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 6777777777653
No 31
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=85.52 E-value=1.3 Score=34.52 Aligned_cols=41 Identities=20% Similarity=0.147 Sum_probs=34.6
Q ss_pred hHHHHHHHHHhCCEEEEe----cCccccHHHHHHHHHHHHhCCCCCCEEEE
Q 044681 97 MHQRKAEMARYADCFIVL----PGGFGTLEKLFEVTTWSQLGVHNKPVAII 143 (184)
Q Consensus 97 ~~~Rk~~m~~~sDa~Ivl----PGG~GTL~El~~~l~~~qlg~~~kPvvl~ 143 (184)
...+....++.||++|++ .=-.||.-||..++.+ +|||+++
T Consensus 71 I~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~al------gKPVv~l 115 (167)
T 1s2d_A 71 TYQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRAM------HKPVILV 115 (167)
T ss_dssp HHHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHHT------TCCEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhhC------CCeEEEE
Confidence 467888889999999996 3468999999999987 8999863
No 32
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=85.06 E-value=12 Score=31.05 Aligned_cols=45 Identities=9% Similarity=0.117 Sum_probs=30.8
Q ss_pred HHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEEEEEecCCHHHHHHHhhh
Q 044681 103 EMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAIIMVSASNAKELVQKLED 159 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl~i~~~~~~~e~~~~l~~ 159 (184)
-++..||.+|. +|| +|+.|+.. .++|.++.- ..++.++..+++.+
T Consensus 221 ~~m~~aDlvI~-~gG-~T~~E~~~---------~g~P~i~ip-~~~~Q~~nA~~l~~ 265 (282)
T 3hbm_A 221 KLMNESNKLII-SAS-SLVNEALL---------LKANFKAIC-YVKNQESTATWLAK 265 (282)
T ss_dssp HHHHTEEEEEE-ESS-HHHHHHHH---------TTCCEEEEC-CSGGGHHHHHHHHH
T ss_pred HHHHHCCEEEE-CCc-HHHHHHHH---------cCCCEEEEe-CCCCHHHHHHHHHH
Confidence 34578999999 677 79887653 389998743 34555566666654
No 33
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=83.70 E-value=2.8 Score=35.01 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=23.2
Q ss_pred HHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 102 AEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 102 ~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..++..||+|| ..||.||+.|.. . +++|+++
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea~---~------~G~P~v~ 325 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTCL---S------EGVPQVS 325 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEE
T ss_pred HHHHhhCCEEE-ecCCHHHHHHHH---H------hCCCEEe
Confidence 34567799988 688899976644 3 4899988
No 34
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=82.46 E-value=14 Score=30.93 Aligned_cols=30 Identities=23% Similarity=0.379 Sum_probs=21.3
Q ss_pred HHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 103 EMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.++..||+|| ..||.+|+.|.. . +++|+++
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~i~ 324 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---A------TATPMIA 324 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEE
T ss_pred HHhhccCEEE-ECCCccHHHHHH---H------hCCCEEE
Confidence 3567899765 578888866643 3 3899987
No 35
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=82.15 E-value=3.2 Score=37.62 Aligned_cols=98 Identities=20% Similarity=0.112 Sum_probs=50.4
Q ss_pred CCCeEEEcCCCcchhHHH---HHHHHhcC-CeEEEEecCcccc-ccccCCCCceEeecC---Ch----HHHHHHHHHhCC
Q 044681 42 KGLDLVYGGGNVGLMGLI---SEEVHRGR-RHVLGIIPRALMK-KELTGVTLGEVKPVD---HM----HQRKAEMARYAD 109 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~---a~ga~~~G-G~viGviP~~~~~-~e~~~~~~~~~~~~~---~~----~~Rk~~m~~~sD 109 (184)
.|+.+|.||.. |..+|+ +++|+..| |.|.=+.|....+ .....+++.-..... .+ .+.-.-+++.+|
T Consensus 244 ~G~vlvigGs~-~~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~~~d 322 (502)
T 3rss_A 244 YGKVLIIAGSR-LYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVD 322 (502)
T ss_dssp GCEEEEECCCS-SCCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHTTCS
T ss_pred CceEEEEECCC-CCCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhccCC
Confidence 59999999987 666665 56777766 5555555654321 000112221111111 01 122233567899
Q ss_pred EEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 110 CFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 110 a~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
++++=|| .|+-++..+.+.. .+...++|+|+
T Consensus 323 avviGpG-lg~~~~~~~~~~~-~l~~~~~pvVl 353 (502)
T 3rss_A 323 VVAIGPG-LGNNEHVREFVNE-FLKTLEKPAVI 353 (502)
T ss_dssp EEEECTT-CCCSHHHHHHHHH-HHHHCCSCEEE
T ss_pred EEEEeCC-CCCCHHHHHHHHH-HHHhcCCCEEE
Confidence 9888775 4543333332221 11124789988
No 36
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=81.35 E-value=1.7 Score=36.47 Aligned_cols=95 Identities=15% Similarity=0.165 Sum_probs=48.4
Q ss_pred CCCeEEEcCCCcchhHHH---HHHHHhcC-CeEEEEecCccccccccCCCCceEeec-CChHHH-HHHHHHhCCEEEEec
Q 044681 42 KGLDLVYGGGNVGLMGLI---SEEVHRGR-RHVLGIIPRALMKKELTGVTLGEVKPV-DHMHQR-KAEMARYADCFIVLP 115 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~---a~ga~~~G-G~viGviP~~~~~~e~~~~~~~~~~~~-~~~~~R-k~~m~~~sDa~IvlP 115 (184)
.|+.+|.||.. |..+|+ +++|+..| |.|.=+.|....+. .....-++.+. ...... ..-+++.+|++++=|
T Consensus 30 ~G~vlvigGs~-~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~--~~~~~Pe~m~~~~~~~~~~~~~~l~~~davviGP 106 (279)
T 3rpz_A 30 YGTALLLAGSD-DMPGAALLAGLGAMRSGLGKLVIGTSENVIPL--IVPVLPEATYWRDGWKKAADAQLEETYRAIAIGP 106 (279)
T ss_dssp GCEEEEECCBT-TBCHHHHHHHHHHHTTTCSEEEEEECTTTHHH--HTTTCTTCEEEETHHHHTTTSCCSSCCSEEEECT
T ss_pred CCEEEEEeCCC-CCCcHHHHHHHHHHHhCCCeEEEEecHHHHHH--HHhcCCeeEEccccccchhhHhhccCCCEEEECC
Confidence 59999999987 888877 56667766 56655556543221 01111122221 111000 001236678877754
Q ss_pred CccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 116 GGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 116 GG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
|.|+=++..+.+.. +-...+|+|+
T Consensus 107 -Glg~~~~~~~~~~~--~l~~~~p~Vl 130 (279)
T 3rpz_A 107 -GLPQTESVQQAVDH--VLTADCPVIL 130 (279)
T ss_dssp -TCCCCHHHHHHHHH--HTTSSSCEEE
T ss_pred -CCCCCHHHHHHHHH--HHhhCCCEEE
Confidence 56664443333321 1123568887
No 37
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=79.34 E-value=8.1 Score=31.77 Aligned_cols=30 Identities=17% Similarity=0.305 Sum_probs=21.2
Q ss_pred HHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 103 EMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.++..||++| ..||.||+.|.. . .++|+++
T Consensus 293 ~ll~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~ 322 (402)
T 3ia7_A 293 SVLAHARACL-THGTTGAVLEAF---A------AGVPLVL 322 (402)
T ss_dssp HHHTTEEEEE-ECCCHHHHHHHH---H------TTCCEEE
T ss_pred HHHhhCCEEE-ECCCHHHHHHHH---H------hCCCEEE
Confidence 4557799754 678889976643 3 4899984
No 38
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=78.82 E-value=8.6 Score=32.07 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=21.5
Q ss_pred HHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 104 MARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 104 m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
++..||+|| ..||.||+.|. +.. ++|+++
T Consensus 296 ll~~ad~~v-~~~G~~t~~Ea---l~~------G~P~v~ 324 (398)
T 3oti_A 296 LLRTCTAVV-HHGGGGTVMTA---IDA------GIPQLL 324 (398)
T ss_dssp HHTTCSEEE-ECCCHHHHHHH---HHH------TCCEEE
T ss_pred HHhhCCEEE-ECCCHHHHHHH---HHh------CCCEEE
Confidence 457799876 68999997664 443 889987
No 39
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=76.92 E-value=13 Score=32.59 Aligned_cols=62 Identities=13% Similarity=0.137 Sum_probs=37.4
Q ss_pred CCEEEE-ecCccccHHHHHHHHHHHHhC-CCCCCEEEE-----------------EEecCCHHHHHHHhhhhcCCCCCcc
Q 044681 108 ADCFIV-LPGGFGTLEKLFEVTTWSQLG-VHNKPVAII-----------------MVSASNAKELVQKLEDYEPSHDGVV 168 (184)
Q Consensus 108 sDa~Iv-lPGG~GTL~El~~~l~~~qlg-~~~kPvvl~-----------------i~~~~~~~e~~~~l~~~~~~~~~~~ 168 (184)
.|++++ ++||+-.-+++++.+.-..-. ..+|||++. +...+||+++++.+-+. .
T Consensus 302 v~~ilv~i~ggi~~~~~vA~~i~~a~~~~~~~kPvvv~~~G~~~~~~~~~l~~~gip~~~~~e~Aa~~~~~l-------~ 374 (397)
T 3ufx_B 302 VKGVFINIFGGITRADEVAKGVIRALEEGLLTKPVVMRVAGTAEEEAKKLLEGKPVYMYPTSIEAAKVTVAM-------K 374 (397)
T ss_dssp CCEEEEEEEEEEEESHHHHHHHHHHHTTTCCCSCEEEEEEEECHHHHHHHTTTSSEEECSSHHHHHHHHHHS-------C
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHhhCCCCcEEEEccCCCHHHHHHHHHhCCCcccCCHHHHHHHHHHH-------H
Confidence 477776 889998889999877543211 148999982 44555666666666544 2
Q ss_pred cccccccc
Q 044681 169 AKAEWDAE 176 (184)
Q Consensus 169 ~~~~~~~~ 176 (184)
...+|.+.
T Consensus 375 ~~a~w~~~ 382 (397)
T 3ufx_B 375 GGAAWLEF 382 (397)
T ss_dssp CSCC----
T ss_pred HHhHHhhC
Confidence 23477775
No 40
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=71.59 E-value=12 Score=30.22 Aligned_cols=30 Identities=30% Similarity=0.562 Sum_probs=22.2
Q ss_pred HHHH-hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 103 EMAR-YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 103 ~m~~-~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.++. .||.+|-= ||.||+.|+.. .++|.++
T Consensus 127 ~~l~~~AdlvIsh-aGagTv~Eal~---------~G~P~Iv 157 (224)
T 2jzc_A 127 SIIRDYSDLVISH-AGTGSILDSLR---------LNKPLIV 157 (224)
T ss_dssp HHHHHHCSCEEES-SCHHHHHHHHH---------TTCCCCE
T ss_pred HHHHhcCCEEEEC-CcHHHHHHHHH---------hCCCEEE
Confidence 3457 89987765 89999877653 3788887
No 41
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=71.58 E-value=38 Score=27.24 Aligned_cols=107 Identities=18% Similarity=0.247 Sum_probs=54.0
Q ss_pred CceEEE-EcCCCCCCC------h-HHHHHHHHHHHHHHHCCC--eEEEcCCCc--ch-------h-------H-------
Q 044681 11 FKRVCV-FCGSSPDYK------Y-CYRKAAIDLGNELVSKGL--DLVYGGGNV--GL-------M-------G------- 57 (184)
Q Consensus 11 ~~~I~V-fggs~~~~~------~-~~~~~A~~lG~~LA~~G~--~lV~GGg~~--Gl-------M-------~------- 57 (184)
+++|.| +|||....+ + ...+.|+++.++. +.|+ .||.|||.. |. - +
T Consensus 9 ~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~-~~G~~vviV~gGG~~~~~~~~~~~g~~~~~~d~~g~l~t~~N 87 (243)
T 3ek6_A 9 YRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQ-QAGAQVALVIGGGNIFRGAGLAASGMDRVTGDHMGMLATVIN 87 (243)
T ss_dssp CSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHH-HTTCEEEEEECSTTTSCSTTTSCSSSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 445555 777776532 2 3445555555443 3454 668888652 22 1 1
Q ss_pred -H-HHHHHHhcCCeEEEEecCccccccccCCCCceEeecCCh-HHHHHHHHHhCCEEEEecCc---cccHHHHHHHHHH
Q 044681 58 -L-ISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHM-HQRKAEMARYADCFIVLPGG---FGTLEKLFEVTTW 130 (184)
Q Consensus 58 -a-~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~-~~Rk~~m~~~sDa~IvlPGG---~GTL~El~~~l~~ 130 (184)
. ..+...+.|...+++.+... .... +++ ..|-..+++.....|+-|+. +++-|.++..++-
T Consensus 88 ~~~l~~al~~~G~~a~~~~~~~~-------~~v~-----~~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~ 154 (243)
T 3ek6_A 88 ALAMQDALEKLGAKVRVMSAIKI-------NDVC-----EDFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAI 154 (243)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCB-------TTTB-----EECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCeEEechhhc-------Cccc-----CcCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHH
Confidence 1 33333456667888865321 1111 122 23334444555555544432 5778888876654
No 42
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=69.99 E-value=6.6 Score=32.49 Aligned_cols=47 Identities=17% Similarity=0.184 Sum_probs=33.1
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------------------EEEec-----CCHHHHHHHhhhhc
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------------------IMVSA-----SNAKELVQKLEDYE 161 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------------------~i~~~-----~~~~e~~~~l~~~~ 161 (184)
..||+|| ..||.||+.|.. . +++|+++ .+... .|++++.+.+.+..
T Consensus 285 ~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll 354 (391)
T 3tsa_A 285 RTCELVI-CAGGSGTAFTAT---R------LGIPQLVLPQYFDQFDYARNLAAAGAGICLPDEQAQSDHEQFTDSIATVL 354 (391)
T ss_dssp GGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCCSTTHHHHHHHHHHTTSEEECCSHHHHTCHHHHHHHHHHHH
T ss_pred hhCCEEE-eCCCHHHHHHHH---H------hCCCEEecCCcccHHHHHHHHHHcCCEEecCcccccCCHHHHHHHHHHHH
Confidence 8899988 578889976643 3 4899998 22222 36788888877765
Q ss_pred C
Q 044681 162 P 162 (184)
Q Consensus 162 ~ 162 (184)
.
T Consensus 355 ~ 355 (391)
T 3tsa_A 355 G 355 (391)
T ss_dssp T
T ss_pred c
Confidence 3
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=69.60 E-value=20 Score=26.33 Aligned_cols=53 Identities=15% Similarity=0.297 Sum_probs=38.6
Q ss_pred HHHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE----------------EEEecCCHHHHHHHhhhhc
Q 044681 100 RKAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI----------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl----------------~i~~~~~~~e~~~~l~~~~ 161 (184)
...-+...||++|..+ .|+|.- ++|++.. ++|||. .++ .+|++++.+.|.+..
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~~--~~Eama~------G~PvI~~~~~~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGLT--PIEAMAS------GKPVIAVNEGGFKETVINEKTGYLV-NADVNEIIDAMKKVS 160 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCHH--HHHHHHT------TCCEEEESSHHHHHHCCBTTTEEEE-CSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEeCCCcCCCChH--HHHHHHc------CCcEEEeCCCCHHHHhcCCCccEEe-CCCHHHHHHHHHHHH
Confidence 3556678899988744 455532 5666654 899998 444 889999999999875
No 44
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=69.12 E-value=9.2 Score=31.31 Aligned_cols=60 Identities=23% Similarity=0.211 Sum_probs=40.6
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe------------------------------EEEcCCCcchhHHH
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD------------------------------LVYGGGNVGLMGLI 59 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~------------------------------lV~GGg~~GlM~a~ 59 (184)
.|++|+++.-.. ++...+.++++-++|.++|+. +|+-||. |-+-.+
T Consensus 4 ~mkki~ii~np~---~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGD-GT~l~a 79 (292)
T 2an1_A 4 HFKCIGIVGHPR---HPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGD-GNMLGA 79 (292)
T ss_dssp CCCEEEEECC----------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCH-HHHHHH
T ss_pred cCcEEEEEEcCC---CHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCc-HHHHHH
Confidence 378899997543 233445677777777776653 3456777 999999
Q ss_pred HHHHHhcCCeEEEE
Q 044681 60 SEEVHRGRRHVLGI 73 (184)
Q Consensus 60 a~ga~~~GG~viGv 73 (184)
+++....+-.++||
T Consensus 80 ~~~~~~~~~P~lGI 93 (292)
T 2an1_A 80 ARTLARYDINVIGI 93 (292)
T ss_dssp HHHHTTSSCEEEEB
T ss_pred HHHhhcCCCCEEEE
Confidence 99988777788998
No 45
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=68.06 E-value=56 Score=27.81 Aligned_cols=62 Identities=15% Similarity=0.226 Sum_probs=40.6
Q ss_pred eEeecCCh-HHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHH
Q 044681 90 EVKPVDHM-HQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKEL 153 (184)
Q Consensus 90 ~~~~~~~~-~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~ 153 (184)
.+.+.+.+ ......++..||++|.=.||. . .|+..+ ++|++. .+.+..|++++
T Consensus 264 ~v~l~~~lg~~~~~~l~~~adlvvt~SGgv--~---~EA~al------G~Pvv~~~~~ter~e~v~~G~~~lv~~d~~~i 332 (385)
T 4hwg_A 264 KIRFLPAFSFTDYVKLQMNAFCILSDSGTI--T---EEASIL------NLPALNIREAHERPEGMDAGTLIMSGFKAERV 332 (385)
T ss_dssp GEEECCCCCHHHHHHHHHHCSEEEECCTTH--H---HHHHHT------TCCEEECSSSCSCTHHHHHTCCEECCSSHHHH
T ss_pred CEEEEcCCCHHHHHHHHHhCcEEEECCccH--H---HHHHHc------CCCEEEcCCCccchhhhhcCceEEcCCCHHHH
Confidence 35555544 334566778999998666652 2 345554 899998 23333589999
Q ss_pred HHHhhhhcC
Q 044681 154 VQKLEDYEP 162 (184)
Q Consensus 154 ~~~l~~~~~ 162 (184)
.+.+.+...
T Consensus 333 ~~ai~~ll~ 341 (385)
T 4hwg_A 333 LQAVKTITE 341 (385)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999887653
No 46
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=67.60 E-value=6.9 Score=32.02 Aligned_cols=70 Identities=21% Similarity=0.166 Sum_probs=39.5
Q ss_pred CeEEEcCCC--------------cchhHHH-HHHHHhcCCeEEEEe-cCccccccccCCCCceEeecCCh---HHHHHHH
Q 044681 44 LDLVYGGGN--------------VGLMGLI-SEEVHRGRRHVLGII-PRALMKKELTGVTLGEVKPVDHM---HQRKAEM 104 (184)
Q Consensus 44 ~~lV~GGg~--------------~GlM~a~-a~ga~~~GG~viGvi-P~~~~~~e~~~~~~~~~~~~~~~---~~Rk~~m 104 (184)
..|||||+. +|-||.+ ++.+.+.|..|+-+- |..+.+ ..+...+.+-+.+. ...-.-.
T Consensus 5 ~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 5 KILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---EPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp EEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---CCCTTEEEEECCSHHHHHHHHHHH
T ss_pred EEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCCCCeEEEEHhHHHHHHHHHHHh
Confidence 357898872 4878766 778888999988774 322111 11112234434333 3333333
Q ss_pred HHhCCEEEEecC
Q 044681 105 ARYADCFIVLPG 116 (184)
Q Consensus 105 ~~~sDa~IvlPG 116 (184)
....|++|-.-+
T Consensus 82 ~~~~Dili~aAA 93 (232)
T 2gk4_A 82 VQDYQVLIHSMA 93 (232)
T ss_dssp GGGCSEEEECSB
T ss_pred cCCCCEEEEcCc
Confidence 456898887665
No 47
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=67.28 E-value=41 Score=25.91 Aligned_cols=53 Identities=15% Similarity=0.239 Sum_probs=41.2
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
..-|++|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 71 ~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~eQA~~Rag 130 (156)
T 3nq4_A 71 GKYDAVVALGTVIRGGTAHFEYVAGGASNGLASVAQDSGVPVAFGVLTTESIEQAIERAG 130 (156)
T ss_dssp CSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESCHHHHHHHBT
T ss_pred CCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCCCHHHHHHHhC
Confidence 4479999887 887777777665543 34443 58999999898999999999876
No 48
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=66.96 E-value=30 Score=24.33 Aligned_cols=13 Identities=0% Similarity=-0.000 Sum_probs=10.0
Q ss_pred HHhCCEEEEecCc
Q 044681 105 ARYADCFIVLPGG 117 (184)
Q Consensus 105 ~~~sDa~IvlPGG 117 (184)
++.+|++|+..+-
T Consensus 68 ~~~~d~vi~~~~~ 80 (141)
T 3llv_A 68 LEGVSAVLITGSD 80 (141)
T ss_dssp CTTCSEEEECCSC
T ss_pred cccCCEEEEecCC
Confidence 4578999998873
No 49
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=66.89 E-value=7.9 Score=31.78 Aligned_cols=47 Identities=15% Similarity=0.081 Sum_probs=32.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhH
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMG 57 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~ 57 (184)
+++|+|.+|....+.+.-...++.+.+.|.+.||.++.=.-..+...
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~~~~ 59 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLS 59 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTSCTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCchHH
Confidence 45788888766555555567899999999999998874333324333
No 50
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=66.31 E-value=9.1 Score=31.36 Aligned_cols=52 Identities=13% Similarity=0.205 Sum_probs=36.5
Q ss_pred HHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhcC
Q 044681 100 RKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYEP 162 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~~ 162 (184)
...-+...||+|| +|. |++ +.|++.. ++|++. .+.+..|++++.+.+.+...
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a~------G~PvI~~~~~~~~~~~~~~g~g~lv~~d~~~la~~i~~ll~ 333 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAAL------GVPVVVLRNVTERPEGLKAGILKLAGTDPEGVYRVVKGLLE 333 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHHT------TCCEEECSSSCSCHHHHHHTSEEECCSCHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHHc------CCCEEeccCCCcchhhhcCCceEECCCCHHHHHHHHHHHHh
Confidence 3455668899985 555 555 6677765 899997 33333689999988887653
No 51
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=65.91 E-value=28 Score=28.87 Aligned_cols=67 Identities=12% Similarity=0.102 Sum_probs=38.7
Q ss_pred EEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCC-ceEeecCCh--HHHHHHHHHhCCEEEEecCcc
Q 044681 46 LVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTL-GEVKPVDHM--HQRKAEMARYADCFIVLPGGF 118 (184)
Q Consensus 46 lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~-~~~~~~~~~--~~Rk~~m~~~sDa~IvlPGG~ 118 (184)
++.|||..|.| +++.|++.|=+|+-+-++.. .+...+ ++.+..+.. .+....+.+..|+++...|..
T Consensus 5 ~ilGgg~~g~~--~~~~Ak~~G~~vv~vd~~~~----~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 74 (363)
T 4ffl_A 5 CLVGGKLQGFE--AAYLSKKAGMKVVLVDKNPQ----ALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENL 74 (363)
T ss_dssp EEECCSHHHHH--HHHHHHHTTCEEEEEESCTT----CTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCH
T ss_pred EEECCCHHHHH--HHHHHHHCCCEEEEEeCCCC----ChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCCh
Confidence 44566655665 45678888888888854322 122233 344444433 344445567789888766653
No 52
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=65.78 E-value=35 Score=24.65 Aligned_cols=78 Identities=14% Similarity=0.062 Sum_probs=38.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEeecC--ChHHHHHHHHHhCCEEEEecCccc
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELT-GVTLGEVKPVD--HMHQRKAEMARYADCFIVLPGGFG 119 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~-~~~~~~~~~~~--~~~~Rk~~m~~~sDa~IvlPGG~G 119 (184)
...+|.|+|..|.. +++...+.|-.|+.+-.+........ .... ..+..+ +...-+..-+..+|++|+.-+...
T Consensus 20 ~~v~IiG~G~iG~~--la~~L~~~g~~V~vid~~~~~~~~~~~~~g~-~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 20 KYIVIFGCGRLGSL--IANLASSSGHSVVVVDKNEYAFHRLNSEFSG-FTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEESCGGGGGGSCTTCCS-EEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CcEEEECCCHHHHH--HHHHHHhCCCeEEEEECCHHHHHHHHhcCCC-cEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 45677887665543 45555667777887754322111111 1111 222222 111111111467899999887654
Q ss_pred cHHH
Q 044681 120 TLEK 123 (184)
Q Consensus 120 TL~E 123 (184)
+...
T Consensus 97 ~~~~ 100 (155)
T 2g1u_A 97 TNFF 100 (155)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4333
No 53
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=64.74 E-value=13 Score=30.61 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=21.7
Q ss_pred HHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 103 EMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.++.++|+|| --||.||+.|.. . +++|+++
T Consensus 300 ~lL~~~~~~v-~h~G~~s~~Eal---~------~GvP~v~ 329 (400)
T 4amg_A 300 ALLETCDAII-HHGGSGTLLTAL---A------AGVPQCV 329 (400)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------HTCCEEE
T ss_pred HHhhhhhhee-ccCCccHHHHHH---H------hCCCEEE
Confidence 3457799854 688999977643 3 3899988
No 54
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=63.94 E-value=11 Score=29.17 Aligned_cols=55 Identities=15% Similarity=0.316 Sum_probs=41.4
Q ss_pred HHHhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 104 MARYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 104 m~~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
|.+.-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 69 la~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eQA~~Rag 130 (160)
T 2c92_A 69 LARNHDAVVALGVVIRGQTPHFDYVCDAVTQGLTRVSLDSSTPIANGVLTTNTEEQALDRAG 130 (160)
T ss_dssp HHTSCSEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESSHHHHHTTBT
T ss_pred HHhcCCEEEEEeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEcCCCCHHHHHHHhc
Confidence 345699999887 877777766665543 34443 58999999999999999988764
No 55
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=63.56 E-value=38 Score=26.72 Aligned_cols=23 Identities=13% Similarity=0.164 Sum_probs=14.4
Q ss_pred hCCEEEEecCccc--------cHHHHHHHHH
Q 044681 107 YADCFIVLPGGFG--------TLEKLFEVTT 129 (184)
Q Consensus 107 ~sDa~IvlPGG~G--------TL~El~~~l~ 129 (184)
.-|++|-..|-.. +.+++-..+.
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLR 134 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHh
Confidence 3589998888543 5555544443
No 56
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=62.59 E-value=60 Score=26.23 Aligned_cols=52 Identities=13% Similarity=0.187 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 99 QRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 99 ~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
....-+...||+||. |. |++ +.|++.. ++||+. .+.+..|++++.+.|.+..
T Consensus 274 ~~~~~~~~~ad~~v~-~S--g~~--~lEA~a~------G~PvI~~~~~~~~~e~v~~g~g~lv~~d~~~la~~i~~ll 340 (384)
T 1vgv_A 274 LPFVWLMNHAWLILT-DS--GGI--QEEAPSL------GKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHHHCSEEEE-SS--STG--GGTGGGG------TCCEEEESSCCSCHHHHHHTSEEEECSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcEEEE-CC--cch--HHHHHHc------CCCEEEccCCCCcchhhhCCceEEeCCCHHHHHHHHHHHH
Confidence 344556688999765 44 333 5666655 889987 3444458999988887754
No 57
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=61.16 E-value=11 Score=27.21 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=22.6
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL 46 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 46 (184)
|++|.|+.+|..++ -.+.|+.+++.|.+.|+.+
T Consensus 1 M~ki~I~y~S~tGn---T~~~A~~ia~~l~~~g~~v 33 (148)
T 3f6r_A 1 MSKVLIVFGSSTGN---TESIAQKLEELIAAGGHEV 33 (148)
T ss_dssp -CEEEEEEECSSSH---HHHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEEEECCCch---HHHHHHHHHHHHHhCCCeE
Confidence 45777777777663 3467888888888777654
No 58
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=60.55 E-value=7.3 Score=32.74 Aligned_cols=52 Identities=13% Similarity=0.080 Sum_probs=33.5
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-----------EEEecCCHHHHHHHhhh
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-----------IMVSASNAKELVQKLED 159 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-----------~i~~~~~~~e~~~~l~~ 159 (184)
+..|.+|+ -||=||+.|+...+.... ...+.|+.+ .+-...+++++++.|.+
T Consensus 81 ~~~d~vvv-~GGDGTl~~v~~~l~~~~-~~~~~plgiiP~Gt~N~fa~~l~i~~~~~~al~~i~~ 143 (332)
T 2bon_A 81 FGVATVIA-GGGDGTINEVSTALIQCE-GDDIPALGILPLGTANDFATSVGIPEALDKALKLAIA 143 (332)
T ss_dssp HTCSEEEE-EESHHHHHHHHHHHHHCC-SSCCCEEEEEECSSSCHHHHHTTCCSSHHHHHHHHHH
T ss_pred cCCCEEEE-EccchHHHHHHHHHhhcc-cCCCCeEEEecCcCHHHHHHhcCCCCCHHHHHHHHHc
Confidence 45676555 589999999999875311 023567655 12224578888888764
No 59
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=59.69 E-value=19 Score=29.38 Aligned_cols=57 Identities=9% Similarity=0.092 Sum_probs=42.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe--------EEEcCCCcchhHHHHHHHHhc--CCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD--------LVYGGGNVGLMGLISEEVHRG--RRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~--------lV~GGg~~GlM~a~a~ga~~~--GG~viGv 73 (184)
|+|+++... ++...+.++++-++|.++|+. +|.=||. |-|-.+++..... +-.++||
T Consensus 1 mki~ii~n~----~~~~~~~~~~l~~~l~~~g~~v~~~~~D~vv~lGGD-GT~l~aa~~~~~~~~~~PilGI 67 (272)
T 2i2c_A 1 MKYMITSKG----DEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGD-GTFLSAFHQYEERLDEIAFIGI 67 (272)
T ss_dssp CEEEEEECC----SHHHHHHHHHHHHHHTTSSCEECSSSCSEEEEEESH-HHHHHHHHHTGGGTTTCEEEEE
T ss_pred CEEEEEECC----CHHHHHHHHHHHHHHHHCCCEeCCCCCCEEEEEcCc-HHHHHHHHHHhhcCCCCCEEEE
Confidence 468888752 345567888899999988753 4556667 9999999988765 6788999
No 60
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=58.54 E-value=26 Score=27.02 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=40.5
Q ss_pred hCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 107 YADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 107 ~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
.-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 73 ~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~vsl~~~vPV~~GVLT~~~~eQA~~Rag 131 (157)
T 2i0f_A 73 EYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGNGILTVENEEQAWVHAR 131 (157)
T ss_dssp CCSEEEEEEEEECCSSSTTHHHHHHHHHHHHHHHHHTTCCEEEEEEEESSHHHHHHHHC
T ss_pred CCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHHhC
Confidence 469999887 887777766665543 34553 68999999999999999999885
No 61
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=58.50 E-value=17 Score=28.03 Aligned_cols=53 Identities=13% Similarity=0.271 Sum_probs=40.3
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
..-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 70 ~~yDavIalG~VIrG~T~Hfd~Va~~vs~gl~~v~l~~~vPV~~GVLT~~~~eQA~~Rag 129 (154)
T 1hqk_A 70 EDIDAVIAIGVLIRGATPHFDYIASEVSKGLANLSLELRKPITFGVITADTLEQAIERAG 129 (154)
T ss_dssp TTCCEEEEEEEEECCSSTHHHHHHHHHHHHHHHHHHHHTSCEEEEEEEESSHHHHHHHEE
T ss_pred CCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHHhc
Confidence 3479999887 877777766665543 34453 58999999999999999998874
No 62
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=58.45 E-value=46 Score=26.11 Aligned_cols=55 Identities=11% Similarity=0.215 Sum_probs=37.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.+++.|.|+++ -..+++++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 7 ~k~vlVTGas~--------GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (252)
T 3h7a_A 7 NATVAVIGAGD--------YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61 (252)
T ss_dssp SCEEEEECCSS--------HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 35778888775 36778888889999998866655344455555555556666555
No 63
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=57.91 E-value=14 Score=29.41 Aligned_cols=65 Identities=11% Similarity=0.056 Sum_probs=47.0
Q ss_pred cCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---EEEecCCHHHHHHHhhhhcCC
Q 044681 94 VDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---IMVSASNAKELVQKLEDYEPS 163 (184)
Q Consensus 94 ~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---~i~~~~~~~e~~~~l~~~~~~ 163 (184)
..++..=+..+-..++.++++-|-+++|.|+.+.+.- ++|++++ .+.--..-++.+++|++...+
T Consensus 16 vr~~~~l~~al~s~~~~ifll~g~i~~l~~~v~~lk~-----~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~p 83 (192)
T 3kts_A 16 AHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQA-----GGKKVLLHADLVNGLKNDDYAIDFLCTEICP 83 (192)
T ss_dssp ESSSHHHHHHTTSSCCEEEECSEETTTHHHHHHHHHH-----TTCEEEEEGGGEETCCCSHHHHHHHHHTTCC
T ss_pred ecCHHHHHHHHcCCCCEEEEecCcHHHHHHHHHHHHH-----cCCeEEEecCchhccCCcHHHHHHHHhCCCC
Confidence 4666555556656689999999999999999986643 5677766 333335667899999986544
No 64
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=57.43 E-value=64 Score=24.87 Aligned_cols=33 Identities=18% Similarity=0.095 Sum_probs=19.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 10 k~vlITGas~--------giG~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 10 KVGIVTGSGG--------GIGQAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEcCC
Confidence 4556666554 25566666667777776654433
No 65
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=56.70 E-value=35 Score=30.10 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=27.0
Q ss_pred EeecCChHHHHHHHHHhCC-EEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 91 VKPVDHMHQRKAEMARYAD-CFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~~~sD-a~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..+++.... ..++.++| ..++--||+||..|... +++|+++
T Consensus 329 ~~vv~w~Pq--~~vL~h~~v~~fvtH~G~~S~~Eal~---------~GvP~i~ 370 (454)
T 3hbf_A 329 GKIVAWAPQ--VEILKHSSVGVFLTHSGWNSVLECIV---------GGVPMIS 370 (454)
T ss_dssp EEEESSCCH--HHHHHSTTEEEEEECCCHHHHHHHHH---------HTCCEEE
T ss_pred eEEEeeCCH--HHHHhhcCcCeEEecCCcchHHHHHH---------cCCCEec
Confidence 344444443 34447777 57777899999888543 3788888
No 66
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=55.29 E-value=36 Score=27.21 Aligned_cols=54 Identities=13% Similarity=0.134 Sum_probs=28.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 25 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 78 (279)
T 3sju_A 25 QTAFVTGVSS--------GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS 78 (279)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4566666654 25566666677777776654443222333333333445555444
No 67
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=53.34 E-value=34 Score=25.81 Aligned_cols=13 Identities=15% Similarity=-0.005 Sum_probs=8.6
Q ss_pred HHhCCEEEEecCc
Q 044681 105 ARYADCFIVLPGG 117 (184)
Q Consensus 105 ~~~sDa~IvlPGG 117 (184)
++..|++|..-|.
T Consensus 71 ~~~~d~vv~~ag~ 83 (221)
T 3r6d_A 71 VTNAEVVFVGAME 83 (221)
T ss_dssp HTTCSEEEESCCC
T ss_pred HcCCCEEEEcCCC
Confidence 3567777777764
No 68
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=52.65 E-value=20 Score=26.30 Aligned_cols=39 Identities=21% Similarity=0.388 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHH----CCCeEE-E--cCC-CcchhHHHHHHHHhcC
Q 044681 29 RKAAIDLGNELVS----KGLDLV-Y--GGG-NVGLMGLISEEVHRGR 67 (184)
Q Consensus 29 ~~~A~~lG~~LA~----~G~~lV-~--GGg-~~GlM~a~a~ga~~~G 67 (184)
.++|+.+|++||+ .|+.-| + ||. .-|-..|++++|.++|
T Consensus 67 ~~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhGrV~Ala~~are~G 113 (116)
T 3r8s_O 67 KDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAG 113 (116)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCEEECTTSCSSSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHhC
Confidence 4789999999988 365433 2 552 2489999999999987
No 69
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=52.47 E-value=1.1e+02 Score=25.89 Aligned_cols=51 Identities=18% Similarity=0.232 Sum_probs=33.9
Q ss_pred HHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 100 RKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
....++..||++|.=. | |+. .|+..+ ++|+++ .+.+..|++++.+.+.+..
T Consensus 300 ~~~~l~~~ad~vv~~S-G-g~~---~EA~a~------G~PvV~~~~~~~~~e~v~~G~~~lv~~d~~~l~~ai~~ll 365 (396)
T 3dzc_A 300 PFVYLMDRAHIILTDS-G-GIQ---EEAPSL------GKPVLVMRETTERPEAVAAGTVKLVGTNQQQICDALSLLL 365 (396)
T ss_dssp HHHHHHHHCSEEEESC-S-GGG---TTGGGG------TCCEEECCSSCSCHHHHHHTSEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCEEEECC-c-cHH---HHHHHc------CCCEEEccCCCcchHHHHcCceEEcCCCHHHHHHHHHHHH
Confidence 4556778999986444 3 443 344444 899997 4444457999988887754
No 70
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=52.41 E-value=40 Score=29.34 Aligned_cols=99 Identities=13% Similarity=0.002 Sum_probs=55.7
Q ss_pred HHHHHHHHH---CCCeEEEcCCCcc------hhHHHHHHHHhcCCeEEEEecCc--cccccccCCC--CceEeecCChHH
Q 044681 33 IDLGNELVS---KGLDLVYGGGNVG------LMGLISEEVHRGRRHVLGIIPRA--LMKKELTGVT--LGEVKPVDHMHQ 99 (184)
Q Consensus 33 ~~lG~~LA~---~G~~lV~GGg~~G------lM~a~a~ga~~~GG~viGviP~~--~~~~e~~~~~--~~~~~~~~~~~~ 99 (184)
.++-++|.+ +...+|++|.. | .+..++++..+.+-+++-++... ..+.+..... -....+++....
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq 342 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSM-GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSS-CCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCH
T ss_pred hhHHHHHhcCCCCceEEEEeccc-cccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCH
Confidence 456667765 35777788876 6 36667777767777888776431 1111100000 012334443333
Q ss_pred HHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 100 RKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..+|...+=.+++--||.||..|... +++|+++
T Consensus 343 -~~vL~h~~~~~fvth~G~~s~~Eal~---------~GvP~i~ 375 (463)
T 2acv_A 343 -VEVLAHKAIGGFVSHCGWNSILESMW---------FGVPILT 375 (463)
T ss_dssp -HHHHHSTTEEEEEECCCHHHHHHHHH---------TTCCEEE
T ss_pred -HHHhCCCccCeEEecCCchhHHHHHH---------cCCCeee
Confidence 34443223345667899999887542 4889988
No 71
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=52.17 E-value=15 Score=27.79 Aligned_cols=14 Identities=21% Similarity=-0.033 Sum_probs=9.6
Q ss_pred HHhCCEEEEecCcc
Q 044681 105 ARYADCFIVLPGGF 118 (184)
Q Consensus 105 ~~~sDa~IvlPGG~ 118 (184)
++..|++|-+.|..
T Consensus 65 ~~~~d~vi~~a~~~ 78 (227)
T 3dhn_A 65 CKGADAVISAFNPG 78 (227)
T ss_dssp HTTCSEEEECCCC-
T ss_pred hcCCCEEEEeCcCC
Confidence 45688888887654
No 72
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=51.96 E-value=80 Score=26.42 Aligned_cols=62 Identities=13% Similarity=0.201 Sum_probs=31.0
Q ss_pred EEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCCh--HHHHHHHHHhCCEEEE
Q 044681 46 LVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHM--HQRKAEMARYADCFIV 113 (184)
Q Consensus 46 lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~--~~Rk~~m~~~sDa~Iv 113 (184)
+|.|||..|. .+++.+++.|=+|+.+-|+...+ ...+.+..+..++ .+.-.-+.+.+|++..
T Consensus 18 lIlG~G~~g~--~la~aa~~~G~~vi~~d~~~~~~----~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 18 GIIGGGQLGR--MMALAAKEMGYKIAVLDPTKNSP----CAQVADIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp EEECCSHHHH--HHHHHHHHTTCEEEEEESSTTCT----TTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred EEECCCHHHH--HHHHHHHHcCCEEEEEeCCCCCc----hHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence 4456655343 35566777777777775433211 2223333332233 2233455577887643
No 73
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=51.92 E-value=18 Score=28.84 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=38.4
Q ss_pred HHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---EEEecCCHHHHHHHhhhhcC
Q 044681 104 MARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---IMVSASNAKELVQKLEDYEP 162 (184)
Q Consensus 104 m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---~i~~~~~~~e~~~~l~~~~~ 162 (184)
+-..+..++++.|.+++|+++...+.- ++||+++ .+---..-++++++|+.+.|
T Consensus 28 ~~s~~~~ifll~g~I~~L~~iv~~ik~-----~gK~vivh~DlI~GLs~d~~ai~fL~~~~p 84 (188)
T 1vkf_A 28 GEIEPDVVFLLKSDILNLKFHLKILKD-----RGKTVFVDMDFVNGLGEGEEAILFVKKAGA 84 (188)
T ss_dssp CCCCSSEEEECCEETTTHHHHHHHHHH-----TTCEEEEEGGGEETCCSSHHHHHHHHHHTC
T ss_pred ccCCCCEEEEEeCcHHHHHHHHHHHHH-----CCCeEEEecCcccccCCCHHHHHHHHhcCC
Confidence 334567899999999999998886643 5899998 23333445789999944444
No 74
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=51.15 E-value=29 Score=30.28 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=51.4
Q ss_pred HHHHHHH---CCCeEEEcCCCcch-----hHHHHHHHHhcCCeEEEEecCcc-------ccccccCCCCceEeecCChHH
Q 044681 35 LGNELVS---KGLDLVYGGGNVGL-----MGLISEEVHRGRRHVLGIIPRAL-------MKKELTGVTLGEVKPVDHMHQ 99 (184)
Q Consensus 35 lG~~LA~---~G~~lV~GGg~~Gl-----M~a~a~ga~~~GG~viGviP~~~-------~~~e~~~~~~~~~~~~~~~~~ 99 (184)
+-++|-+ +...+|++|.. +. +..++++..+.+-+++-++.... .+.+.....-....+.+....
T Consensus 285 ~~~wld~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq 363 (482)
T 2pq6_A 285 CLDWLESKEPGSVVYVNFGST-TVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQ 363 (482)
T ss_dssp HHHHHTTSCTTCEEEEECCSS-SCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCH
T ss_pred HHHHHhcCCCCceEEEecCCc-ccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCH
Confidence 4556654 34566677765 43 45556666666667776653211 010000000012344444443
Q ss_pred HHHHHHHhCCE-EEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 100 RKAEMARYADC-FIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 100 Rk~~m~~~sDa-~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
. . ++.++++ .++--||+||..|... +++|+++
T Consensus 364 ~-~-~L~h~~~~~~vth~G~~s~~Eal~---------~GvP~i~ 396 (482)
T 2pq6_A 364 D-K-VLNHPSIGGFLTHCGWNSTTESIC---------AGVPMLC 396 (482)
T ss_dssp H-H-HHTSTTEEEEEECCCHHHHHHHHH---------HTCCEEE
T ss_pred H-H-HhcCCCCCEEEecCCcchHHHHHH---------cCCCEEe
Confidence 3 3 4466664 6777899999887543 3788888
No 75
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=51.05 E-value=14 Score=26.87 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=22.8
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
...++|+|+|.|..... .+..+-+.|-+.||.+.
T Consensus 2 ~~p~siAVVGaS~~~~~-----~g~~v~~~L~~~g~~V~ 35 (122)
T 3ff4_A 2 NAMKKTLILGATPETNR-----YAYLAAERLKSHGHEFI 35 (122)
T ss_dssp CCCCCEEEETCCSCTTS-----HHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEEccCCCCCC-----HHHHHHHHHHHCCCeEE
Confidence 45689999998875432 34456666667777554
No 76
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=50.90 E-value=35 Score=26.15 Aligned_cols=53 Identities=17% Similarity=0.236 Sum_probs=40.2
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
..-||+|+|+ |+.--.+-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 70 ~~yDavIaLG~VIrG~T~Hfd~V~~~vs~Gl~~v~l~~~vPV~~GVLT~~~~eQA~~Rag 129 (154)
T 1rvv_A 70 KKYDAIITLGTVIRGATTHYDYVCNEAAKGIAQAANTTGVPVIFGIVTTENIEQAIERAG 129 (154)
T ss_dssp SCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCSCEEEEEEEESSHHHHHHTEE
T ss_pred CCCCEEEEeeeeecCCchHHHHHHHHHHHHHHHHHhhhCCCEEEEecCCCCHHHHHHHhc
Confidence 3479999887 887777766665543 34453 58999999998999999988763
No 77
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=50.20 E-value=30 Score=29.41 Aligned_cols=34 Identities=24% Similarity=0.336 Sum_probs=27.9
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
+..|+||+.-| .=||+|-+.+|+++- ...||||+
T Consensus 78 ~~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVl 111 (326)
T 1nns_A 78 DKTDGFVITHG-TDTMEETAYFLDLTV--KCDKPVVM 111 (326)
T ss_dssp GGCSEEEEECC-SSSHHHHHHHHHHHC--CCCSCEEE
T ss_pred hcCCcEEEEcC-chhHHHHHHHHHHhc--CCCCCEEE
Confidence 34599999974 789999999999864 35899999
No 78
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=49.98 E-value=26 Score=27.83 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=28.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
++|+|+++......+.-...++.+.+.+.+.|+.++.=
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~ 40 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPV 40 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEE
Confidence 57999998665433443457889999999999987743
No 79
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=49.92 E-value=15 Score=28.68 Aligned_cols=52 Identities=17% Similarity=0.194 Sum_probs=40.1
Q ss_pred hCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 107 YADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 107 ~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
.-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 80 ~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~vsL~~~vPV~~GVLT~~~~eQA~~Rag 138 (168)
T 1ejb_A 80 PLDVVIPIGVLIKGSTMHFEYISDSTTHALMNLQEKVDMPVIFGLLTCMTEEQALARAG 138 (168)
T ss_dssp CCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHTSCBCCEEEEESSHHHHHHHBT
T ss_pred CcCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEecCCCHHHHHHhcC
Confidence 369999887 877777766665543 34443 58999998889999999999875
No 80
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=49.90 E-value=34 Score=24.60 Aligned_cols=73 Identities=14% Similarity=0.017 Sum_probs=39.1
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccc---cc-cccCCCCceEeecCCh---HHHHHHHHHhCCEEEEe
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALM---KK-ELTGVTLGEVKPVDHM---HQRKAEMARYADCFIVL 114 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~---~~-e~~~~~~~~~~~~~~~---~~Rk~~m~~~sDa~Ivl 114 (184)
+++.+|+|+|..| ..+++...+.|-.|+.|-++... .. +.....+ ..+. .+. ..-+..-++.+|++|+.
T Consensus 3 ~~~vlI~G~G~vG--~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~-gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGHSILA--INTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIP-GDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECCSHHH--HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEE-SCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECCCHHH--HHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEE-cCCCCHHHHHHcChhhCCEEEEe
Confidence 4567888887644 45666666777788887653110 00 0001111 2222 222 22222335789999998
Q ss_pred cCcc
Q 044681 115 PGGF 118 (184)
Q Consensus 115 PGG~ 118 (184)
-+.-
T Consensus 79 ~~~d 82 (153)
T 1id1_A 79 SDND 82 (153)
T ss_dssp SSCH
T ss_pred cCCh
Confidence 8764
No 81
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=49.76 E-value=49 Score=26.07 Aligned_cols=54 Identities=19% Similarity=0.112 Sum_probs=32.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|-|+++ -..+++++.|+++|+.++.. +....--+.+.+...+.|+.+..+
T Consensus 5 k~vlVTGas~--------gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3oid_A 5 KCALVTGSSR--------GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59 (258)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 5677777665 25677788888889887764 443233344444444456665555
No 82
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=49.33 E-value=21 Score=29.40 Aligned_cols=28 Identities=21% Similarity=0.129 Sum_probs=12.7
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.||+||.+ ++=.++++...+.|-.|+++
T Consensus 27 vlVtGatG-~iG~~l~~~L~~~g~~V~~~ 54 (375)
T 1t2a_A 27 ALITGITG-QDGSYLAEFLLEKGYEVHGI 54 (375)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 34444443 44444444444444444444
No 83
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=48.92 E-value=50 Score=26.40 Aligned_cols=53 Identities=23% Similarity=0.182 Sum_probs=36.2
Q ss_pred HHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEe--cCCHHHHHHHhhhhc
Q 044681 101 KAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVS--ASNAKELVQKLEDYE 161 (184)
Q Consensus 101 k~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~--~~~~~e~~~~l~~~~ 161 (184)
..-+...||++|.-. .|+|+- +.|+++. ++||+. .+.+ ..|++++.+.|.+..
T Consensus 264 ~~~~~~~ad~~v~ps~~e~~~~~--~~Ea~a~------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 264 VSELMAAADLLLHPAYQEAAGIV--LLEAITA------GLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKAL 335 (374)
T ss_dssp HHHHHHHCSEEEECCSCCSSCHH--HHHHHHH------TCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCEEEeccccCCcccH--HHHHHHC------CCCEEEecCCCchhhhccCCceEEeCCCCCHHHHHHHHHHHH
Confidence 345668899887644 344442 6666665 899998 3333 359999999998764
No 84
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=48.60 E-value=55 Score=24.92 Aligned_cols=55 Identities=18% Similarity=0.196 Sum_probs=33.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHH-hcCCeEEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVH-RGRRHVLGI 73 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~-~~GG~viGv 73 (184)
+|++.|.|+++ -..+++.+.|+++|+.|+..+...--.+.+.+... +.+..+.-+
T Consensus 2 ~k~vlITGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 57 (235)
T 3l77_A 2 MKVAVITGASR--------GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYH 57 (235)
T ss_dssp CCEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CCEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEE
Confidence 46778888775 36778888888999988766554222233333222 345555554
No 85
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=48.53 E-value=48 Score=26.48 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=35.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.++.+..+.
T Consensus 5 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 5 KVILITGASG--------GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCcc--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 5677777665 366778888889999988666542333444444445567666653
No 86
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=48.38 E-value=77 Score=25.35 Aligned_cols=33 Identities=21% Similarity=0.089 Sum_probs=19.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+..
T Consensus 9 k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 9 KIAIVTGASS--------GIGRAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEECCSC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEECC
Confidence 4455555554 25566666677777776655444
No 87
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=48.15 E-value=17 Score=29.98 Aligned_cols=41 Identities=24% Similarity=0.280 Sum_probs=28.5
Q ss_pred HHHHHHHHCCC-eEEEcCCCcchhHHHHHHHHhc-CCeEEEEecC
Q 044681 34 DLGNELVSKGL-DLVYGGGNVGLMGLISEEVHRG-RRHVLGIIPR 76 (184)
Q Consensus 34 ~lG~~LA~~G~-~lV~GGg~~GlM~a~a~ga~~~-GG~viGviP~ 76 (184)
++.+.+++ ++ .||.-||. |-+-.+.++.... ....+|++|-
T Consensus 55 ~~~~~~~~-~~d~vv~~GGD-GTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 55 KYCQEFAS-KVDLIIVFGGD-GTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHTT-TCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHhhc-CCCEEEEEccc-hHHHHHHHHHhhCCCCCcEEEecC
Confidence 34444443 43 56667777 9999999988773 4578999984
No 88
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=48.11 E-value=44 Score=25.69 Aligned_cols=53 Identities=9% Similarity=0.204 Sum_probs=40.2
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
..-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 70 ~~yDavIaLG~VIrG~T~Hfd~Va~~v~~gl~~v~L~~~vPV~~GVLT~~~~eQA~~Rag 129 (156)
T 1c2y_A 70 GKYHAIVCLGAVVKGDTSHYDAVVNSASSGVLSAGLNSGVPCVFGVLTCDNMDQAINRAG 129 (156)
T ss_dssp TCCSEEEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCSSHHHHHHHEE
T ss_pred CCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHHcC
Confidence 3479999987 777777766665543 34453 58999999999999999998763
No 89
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=47.90 E-value=57 Score=25.65 Aligned_cols=54 Identities=20% Similarity=0.261 Sum_probs=32.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++- ..+++++.|+++|+.|+.-+...--.+.+.+...+.|+++..+
T Consensus 12 k~vlVTGas~g--------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 65 (264)
T 3ucx_A 12 KVVVISGVGPA--------LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSV 65 (264)
T ss_dssp CEEEEESCCTT--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECCCcH--------HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 56777777652 5667777788888887765544233333444444456655555
No 90
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=47.82 E-value=30 Score=24.85 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=24.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|++|.|+.+|..++.. +.|+.+++.|.+.|+.+.
T Consensus 1 M~ki~I~Y~S~tGnT~---~~A~~ia~~l~~~g~~v~ 34 (147)
T 2hna_A 1 MADITLISGSTLGGAE---YVAEHLAEKLEEAGFTTE 34 (147)
T ss_dssp CCSEEEECCTTSCCCH---HHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEEECCchHHH---HHHHHHHHHHHHCCCceE
Confidence 4567777778888654 467788888888877654
No 91
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=47.67 E-value=1.1e+02 Score=24.54 Aligned_cols=51 Identities=10% Similarity=0.191 Sum_probs=35.3
Q ss_pred HHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 100 RKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
...-+...||++|. |. |+. +.|++.. ++||+. .+.+..|++++.+.|.+..
T Consensus 275 ~~~~~~~~ad~~v~-~s--g~~--~lEA~a~------G~Pvi~~~~~~~~~e~v~~g~g~~v~~d~~~la~~i~~ll 340 (375)
T 3beo_A 275 DFHNVAARSYLMLT-DS--GGV--QEEAPSL------GVPVLVLRDTTERPEGIEAGTLKLAGTDEETIFSLADELL 340 (375)
T ss_dssp HHHHHHHTCSEEEE-CC--HHH--HHHHHHH------TCCEEECSSCCSCHHHHHTTSEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHhCcEEEE-CC--CCh--HHHHHhc------CCCEEEecCCCCCceeecCCceEEcCCCHHHHHHHHHHHH
Confidence 34556688999964 54 444 7777776 889987 3444358999888887754
No 92
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=46.90 E-value=18 Score=30.17 Aligned_cols=40 Identities=23% Similarity=0.464 Sum_probs=27.5
Q ss_pred HHHHHHCCC-eEEEcCCCcchhHHHHHHHHhcC-CeEEEEecC
Q 044681 36 GNELVSKGL-DLVYGGGNVGLMGLISEEVHRGR-RHVLGIIPR 76 (184)
Q Consensus 36 G~~LA~~G~-~lV~GGg~~GlM~a~a~ga~~~G-G~viGviP~ 76 (184)
.+.+...++ .||..||. |-+-.++++..+.+ ...+|++|-
T Consensus 73 ~~~~~~~~~d~vvv~GGD-GTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 73 AERAMHENYDVLIAAGGD-GTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHTTTTCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHhhcCCCEEEEEcCc-hHHHHHHHHHHhCCCCCcEEEecC
Confidence 333444454 45667778 99999999986543 557899884
No 93
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=46.77 E-value=55 Score=25.22 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=40.8
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
..-|++|+|+ |+.=-.|-+....+. +++.+ +++||++.+..+++.+++++...
T Consensus 76 ~~yDavIaLG~VIrG~T~Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~eQA~~Rag 135 (159)
T 1kz1_A 76 NTYDAVIGIGVLIKGSTMHFEYISEAVVHGLMRVGLDSGVPVILGLLTVLNEEQALYRAG 135 (159)
T ss_dssp SCCSEEEEEEEEECCSSSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESSHHHHHHHBT
T ss_pred CCCCEEEEecccccCCchHHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHHHHHHHhC
Confidence 4579999887 887777766665543 34453 58999999999999999999874
No 94
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=46.70 E-value=67 Score=23.30 Aligned_cols=53 Identities=21% Similarity=0.220 Sum_probs=35.7
Q ss_pred HHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 101 KAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 101 k~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
..-+...||++|... .|+|+- ++|++.. ++|||. .++-..|++++.+.|.+..
T Consensus 109 ~~~~~~~ad~~l~ps~~e~~~~~--~~Ea~a~------G~PvI~~~~~~~~e~~~~~~g~~~~~~~~~~l~~~i~~l~ 178 (200)
T 2bfw_A 109 VRELYGSVDFVIIPSYFEPFGLV--ALEAMCL------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKAL 178 (200)
T ss_dssp HHHHHTTCSEEEECCSCCSSCHH--HHHHHHT------TCEEEEESCHHHHHHCCTTTCEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEECCCCCCccHH--HHHHHHC------CCCEEEeCCCChHHHcCCCceEEecCCCHHHHHHHHHHHH
Confidence 445568899888744 244433 6666654 889888 3444468999999888764
No 95
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=46.59 E-value=19 Score=27.78 Aligned_cols=73 Identities=7% Similarity=-0.017 Sum_probs=37.9
Q ss_pred eEEEcCCCcchhHHHHHHHHhcC-CeEEEEecCccccccccCCCCceEeecCChHHH--HHHHHHhCCEEEEecCcccc
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGR-RHVLGIIPRALMKKELTGVTLGEVKPVDHMHQR--KAEMARYADCFIVLPGGFGT 120 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~G-G~viGviP~~~~~~e~~~~~~~~~~~~~~~~~R--k~~m~~~sDa~IvlPGG~GT 120 (184)
.||+||.+ |+=.++++...+.| -.|+.+.-+.....+..... -..+..|+... -..+++..|++|..-|+...
T Consensus 26 vlVtGatG-~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 26 VLILGAGG-QIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN--SQIIMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp EEEETTTS-HHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT--EEEEECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred EEEEeCCc-HHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC--cEEEEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 57788776 77777777777777 46666532111101111111 12223333222 22344678999888777554
No 96
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=46.58 E-value=35 Score=27.74 Aligned_cols=39 Identities=18% Similarity=0.232 Sum_probs=26.2
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
..||+|++++........-....+..+.+.|+++||.+.
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~ 56 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVS 56 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEE
Confidence 457899999965433222344678899999999998764
No 97
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=46.11 E-value=43 Score=25.03 Aligned_cols=16 Identities=6% Similarity=-0.226 Sum_probs=10.7
Q ss_pred HHHHhCCEEEEecCcc
Q 044681 103 EMARYADCFIVLPGGF 118 (184)
Q Consensus 103 ~m~~~sDa~IvlPGG~ 118 (184)
..+...|++|-+-|-.
T Consensus 58 ~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 58 ADLDSVDAVVDALSVP 73 (224)
T ss_dssp HHHTTCSEEEECCCCC
T ss_pred hhcccCCEEEECCccC
Confidence 3446678888877664
No 98
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=45.85 E-value=22 Score=27.30 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=17.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
||+|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 1 Mk~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~r 33 (230)
T 3guy_A 1 MSLIVITGASS--------GLGAELAKLYDAEGKATYLTGR 33 (230)
T ss_dssp --CEEEESTTS--------HHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEeC
Confidence 34566666654 2455555666666666654443
No 99
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=44.69 E-value=24 Score=28.57 Aligned_cols=36 Identities=8% Similarity=-0.023 Sum_probs=20.7
Q ss_pred cccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 5 KEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 5 ~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
+..+...|+|.|.|++. -....|.+.|.++|+.|+.
T Consensus 13 ~~~~~~~~~vlVtGatG--------~iG~~l~~~L~~~G~~V~~ 48 (347)
T 4id9_A 13 GLVPRGSHMILVTGSAG--------RVGRAVVAALRTQGRTVRG 48 (347)
T ss_dssp --------CEEEETTTS--------HHHHHHHHHHHHTTCCEEE
T ss_pred cccccCCCEEEEECCCC--------hHHHHHHHHHHhCCCEEEE
Confidence 34445567899999875 2566777777777877664
No 100
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=44.47 E-value=56 Score=23.03 Aligned_cols=55 Identities=16% Similarity=0.216 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCC-CEEE---------------EEEecCCHHHHHHHhhhh
Q 044681 99 QRKAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNK-PVAI---------------IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 99 ~Rk~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~k-Pvvl---------------~i~~~~~~~e~~~~l~~~ 160 (184)
+...-+...||++|.-. -|+|. =+.|++.. ++ ||+. .++..+|++++.+.|.+.
T Consensus 66 ~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama~------G~vPvi~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~l 137 (166)
T 3qhp_A 66 NELLEILKTCTLYVHAANVESEAI--ACLEAISV------GIVPVIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWW 137 (166)
T ss_dssp HHHHHHHTTCSEEEECCCSCCCCH--HHHHHHHT------TCCEEEECCTTCGGGGGCSSGGGEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCcccCccH--HHHHHHhc------CCCcEEeeCCCCchhhhccCCceEEcCCCHHHHHHHHHHH
Confidence 33455668899887633 34553 35666654 77 8888 456678999999999876
Q ss_pred c
Q 044681 161 E 161 (184)
Q Consensus 161 ~ 161 (184)
.
T Consensus 138 ~ 138 (166)
T 3qhp_A 138 L 138 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 101
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=44.44 E-value=23 Score=29.55 Aligned_cols=40 Identities=28% Similarity=0.474 Sum_probs=26.5
Q ss_pred HHHHHHCCC-eEEEcCCCcchhHHHHHHHHhc---CCeEEEEecC
Q 044681 36 GNELVSKGL-DLVYGGGNVGLMGLISEEVHRG---RRHVLGIIPR 76 (184)
Q Consensus 36 G~~LA~~G~-~lV~GGg~~GlM~a~a~ga~~~---GG~viGviP~ 76 (184)
.+.+...++ .||.-||. |-+-.++++..+. -...+|++|-
T Consensus 75 ~~~~~~~~~d~vvv~GGD-GTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 75 VEEARKFGVATVIAGGGD-GTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHHHTCSEEEEEESH-HHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHhcCCCEEEEEccc-hHHHHHHHHHhhcccCCCCeEEEecC
Confidence 333333444 45566667 9999999998853 3446999984
No 102
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=44.34 E-value=69 Score=26.39 Aligned_cols=41 Identities=22% Similarity=0.207 Sum_probs=26.9
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCC--eEEEcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGL--DLVYGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~--~lV~GGg~ 52 (184)
.+.|-=+||+.....+.....++++.. |.+.|+ .||.|||+
T Consensus 27 k~iVIKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 27 KTLVIKYGGNAMESEELKAGFARDVVL-MKAVGINPVVVHGGGP 69 (300)
T ss_dssp CEEEEEECCTTTTSSHHHHHHHHHHHH-HHHTTCEEEEEECCCH
T ss_pred CeEEEEECchhhCCchHHHHHHHHHHH-HHHCCCeEEEEECCcH
Confidence 345666788877654445667777765 455666 57789965
No 103
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=44.11 E-value=52 Score=25.78 Aligned_cols=54 Identities=7% Similarity=0.108 Sum_probs=31.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+++.|-|+++ -..+++++.|+++|+.|+.-+...---+.+.+...+.++++..+
T Consensus 13 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 66 (256)
T 3gaf_A 13 AVAIVTGAAA--------GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGL 66 (256)
T ss_dssp CEEEECSCSS--------HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 5666666664 25667777778888887755544222233333344456666555
No 104
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=43.59 E-value=65 Score=26.07 Aligned_cols=54 Identities=24% Similarity=0.265 Sum_probs=38.2
Q ss_pred HHHHHHHhCCEEEEec---CccccHHHHHHHHHHHHhCCCCCCEEE----------------EEEecCCHHHHHHHhhhh
Q 044681 100 RKAEMARYADCFIVLP---GGFGTLEKLFEVTTWSQLGVHNKPVAI----------------IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 100 Rk~~m~~~sDa~IvlP---GG~GTL~El~~~l~~~qlg~~~kPvvl----------------~i~~~~~~~e~~~~l~~~ 160 (184)
...-+...||++|... .|+|+ =+.|++.. ++|||. .++-.+|++++.+.|.+.
T Consensus 275 ~~~~~~~~adv~v~ps~~~e~~~~--~~~Ea~a~------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l 346 (406)
T 2gek_A 275 TKASAMRSADVYCAPHLGGESFGI--VLVEAMAA------GTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGI 346 (406)
T ss_dssp HHHHHHHHSSEEEECCCSCCSSCH--HHHHHHHH------TCEEEECCCHHHHHHHTTTTSSEECCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHCCEEEecCCCCCCCch--HHHHHHHc------CCCEEEecCCcHHHHhcCCCceEEeCCCCHHHHHHHHHHH
Confidence 3456668899988763 34553 36677765 899998 444448999999988876
Q ss_pred c
Q 044681 161 E 161 (184)
Q Consensus 161 ~ 161 (184)
.
T Consensus 347 ~ 347 (406)
T 2gek_A 347 L 347 (406)
T ss_dssp H
T ss_pred H
Confidence 4
No 105
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=43.57 E-value=70 Score=25.43 Aligned_cols=54 Identities=11% Similarity=0.129 Sum_probs=31.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 27 k~~lVTGas~--------gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 80 (271)
T 4ibo_A 27 RTALVTGSSR--------GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAV 80 (271)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 4566666654 25667778888888888766554222333333333445555444
No 106
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=43.56 E-value=1e+02 Score=24.47 Aligned_cols=12 Identities=25% Similarity=0.379 Sum_probs=8.3
Q ss_pred hCCEEEEecCcc
Q 044681 107 YADCFIVLPGGF 118 (184)
Q Consensus 107 ~sDa~IvlPGG~ 118 (184)
.-|++|-..|-.
T Consensus 107 ~iD~lvnnAg~~ 118 (280)
T 4da9_A 107 RIDCLVNNAGIA 118 (280)
T ss_dssp CCCEEEEECC--
T ss_pred CCCEEEECCCcc
Confidence 469999988863
No 107
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=43.50 E-value=33 Score=25.94 Aligned_cols=34 Identities=12% Similarity=0.265 Sum_probs=25.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHH-HCCCeEEEcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELV-SKGLDLVYGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA-~~G~~lV~GGg~ 52 (184)
|++|.|.|++. ...+.+.+.|+ ++|+.|+.-...
T Consensus 5 mk~vlVtGasg--------~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 5 YXYITILGAAG--------QIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CSEEEEESTTS--------HHHHHHHHHHHHHCCCEEEEEESS
T ss_pred EEEEEEEeCCc--------HHHHHHHHHHHhcCCceEEEEecC
Confidence 45599999876 36778888888 799988765443
No 108
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=43.34 E-value=1.3e+02 Score=24.34 Aligned_cols=13 Identities=15% Similarity=0.025 Sum_probs=9.1
Q ss_pred hCCEEEEecCccc
Q 044681 107 YADCFIVLPGGFG 119 (184)
Q Consensus 107 ~sDa~IvlPGG~G 119 (184)
.-|++|-..|-..
T Consensus 114 ~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 114 GLDVLVNNAGIVR 126 (322)
T ss_dssp CCCEEECCCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 4588888877543
No 109
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=43.29 E-value=70 Score=25.81 Aligned_cols=54 Identities=15% Similarity=0.194 Sum_probs=33.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++++.|+++|+.|+.-+...---+.+.+...+.+..+..+
T Consensus 32 k~vlVTGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (301)
T 3tjr_A 32 RAAVVTGGAS--------GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85 (301)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEE
Confidence 4677777765 36777888888899888766554222333333333445555555
No 110
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=43.02 E-value=86 Score=25.31 Aligned_cols=56 Identities=18% Similarity=0.077 Sum_probs=35.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-|.+.|-|+++ + .-+++++.||++|..|+.-+-..--.+.+++...+.|++++.+-
T Consensus 7 gKvalVTGas~-G-------IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 7 NKVVIVTGAGS-G-------IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp TCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEeCCCC-H-------HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 35556666655 2 56667777788888888655543334455555556777777763
No 111
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=42.80 E-value=32 Score=26.95 Aligned_cols=29 Identities=21% Similarity=0.217 Sum_probs=16.4
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 24 ~vlITGas~-gIG~~la~~l~~~G~~V~~~ 52 (251)
T 3orf_A 24 NILVLGGSG-ALGAEVVKFFKSKSWNTISI 52 (251)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345566655 55555566555555555554
No 112
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=42.77 E-value=1.1e+02 Score=23.30 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=26.0
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCC-CeEEEcCC
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKG-LDLVYGGG 51 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G-~~lV~GGg 51 (184)
..||+|.|.|++. -..+.+.+.|+++| +.|+.-..
T Consensus 21 ~~mk~vlVtGatG--------~iG~~l~~~L~~~G~~~V~~~~R 56 (236)
T 3qvo_A 21 GHMKNVLILGAGG--------QIARHVINQLADKQTIKQTLFAR 56 (236)
T ss_dssp -CCEEEEEETTTS--------HHHHHHHHHHTTCTTEEEEEEES
T ss_pred CcccEEEEEeCCc--------HHHHHHHHHHHhCCCceEEEEEc
Confidence 3468899999876 36788888899999 77765443
No 113
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=42.64 E-value=32 Score=26.27 Aligned_cols=16 Identities=19% Similarity=0.283 Sum_probs=6.6
Q ss_pred HHHHHHHHHHCCCeEE
Q 044681 32 AIDLGNELVSKGLDLV 47 (184)
Q Consensus 32 A~~lG~~LA~~G~~lV 47 (184)
.+++.+.|+++|+.|+
T Consensus 14 G~~l~~~L~~~g~~V~ 29 (255)
T 2dkn_A 14 GAALKELLARAGHTVI 29 (255)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHhCCCEEE
Confidence 3334444444444433
No 114
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=42.57 E-value=72 Score=25.51 Aligned_cols=28 Identities=18% Similarity=0.245 Sum_probs=14.5
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 31 ~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 31 ALITGAGS-GIGRATALALAADGVTVGAL 58 (283)
T ss_dssp EEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45555554 55555555555555554443
No 115
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=41.71 E-value=1.5e+02 Score=24.67 Aligned_cols=109 Identities=15% Similarity=0.243 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHCCCeEE-EcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHhCC
Q 044681 31 AAIDLGNELVSKGLDLV-YGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARYAD 109 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV-~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sD 109 (184)
...+..+.|.+.|+.++ |---. =..++...+.|...+ +|-.. +.. .+..+ .++ +--+.+.+..+
T Consensus 123 ~tv~aa~~L~~~Gf~Vlpy~~dd----~~~akrl~~~G~~aV--mPlg~-pIG-sG~Gi------~~~-~lI~~I~e~~~ 187 (265)
T 1wv2_A 123 ETLKAAEQLVKDGFDVMVYTSDD----PIIARQLAEIGCIAV--MPLAG-LIG-SGLGI------CNP-YNLRIILEEAK 187 (265)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSC----HHHHHHHHHSCCSEE--EECSS-STT-CCCCC------SCH-HHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHhCCCEE--EeCCc-cCC-CCCCc------CCH-HHHHHHHhcCC
Confidence 45566777889999988 54433 245566667887655 55211 111 11111 122 22355667788
Q ss_pred EEEEecCccccHHHHHHHHHHHHhCCCCCCEEE--EEEecCCHHHHHHHhhh
Q 044681 110 CFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI--IMVSASNAKELVQKLED 159 (184)
Q Consensus 110 a~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl--~i~~~~~~~e~~~~l~~ 159 (184)
.-|+.-||++|.+.+..++.+ |.. -|++ .|...+||.+..+.+.+
T Consensus 188 vPVI~eGGI~TPsDAa~AmeL---GAd--gVlVgSAI~~a~dP~~ma~af~~ 234 (265)
T 1wv2_A 188 VPVLVDAGVGTASDAAIAMEL---GCE--AVLMNTAIAHAKDPVMMAEAMKH 234 (265)
T ss_dssp SCBEEESCCCSHHHHHHHHHH---TCS--EEEESHHHHTSSSHHHHHHHHHH
T ss_pred CCEEEeCCCCCHHHHHHHHHc---CCC--EEEEChHHhCCCCHHHHHHHHHH
Confidence 888889999999999988855 433 2333 44557889888777776
No 116
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=41.70 E-value=82 Score=24.41 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=31.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+++.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 8 k~~lVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 61 (247)
T 2jah_A 8 KVALITGASS--------GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL 61 (247)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 5777888765 36677888888899888765544222233333333345555544
No 117
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=41.68 E-value=63 Score=25.74 Aligned_cols=43 Identities=9% Similarity=0.197 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 31 AAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..+++++.|+++|+.|+.-+....--+.+.+...+.++.+..+
T Consensus 45 IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 87 (275)
T 4imr_A 45 IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQEL 87 (275)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE
Confidence 4555666666667666544433233344444344445544444
No 118
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=41.63 E-value=34 Score=26.42 Aligned_cols=30 Identities=10% Similarity=0.069 Sum_probs=16.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|.|.|+++ -..+++.+.|+++|+.|+.
T Consensus 1 mk~vlVTGas~--------gIG~~~a~~l~~~G~~V~~ 30 (257)
T 1fjh_A 1 MSIIVISGCAT--------GIGAATRKVLEAAGHQIVG 30 (257)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEeCCCC--------HHHHHHHHHHHHCCCEEEE
Confidence 34566666554 2455555666666666554
No 119
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=41.60 E-value=91 Score=22.01 Aligned_cols=74 Identities=16% Similarity=0.078 Sum_probs=37.9
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHH---HHHHHHHhCCEEEEecCcc
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQ---RKAEMARYADCFIVLPGGF 118 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~---Rk~~m~~~sDa~IvlPGG~ 118 (184)
+++.+|+|.|..|. .+++...+.|-.|+++-.+...-.+.....+ ..+..+... -+..-++.+|++|+.-+--
T Consensus 7 ~~~viIiG~G~~G~--~la~~L~~~g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVGS--LLGEKLLASDIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHHH--HHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHHH--HHHHHHHHCCCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 56788888766333 4455566677788888543221111111111 222222221 1222356799999876654
Q ss_pred c
Q 044681 119 G 119 (184)
Q Consensus 119 G 119 (184)
-
T Consensus 83 ~ 83 (140)
T 3fwz_A 83 Y 83 (140)
T ss_dssp H
T ss_pred H
Confidence 3
No 120
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=41.54 E-value=72 Score=24.46 Aligned_cols=54 Identities=17% Similarity=0.147 Sum_probs=30.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+...---+.+.+...+.+.++..+
T Consensus 6 k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (247)
T 3lyl_A 6 KVALVTGASR--------GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL 59 (247)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 5666767664 25667777788888887755544222233333333445555544
No 121
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=41.39 E-value=54 Score=24.27 Aligned_cols=28 Identities=21% Similarity=0.189 Sum_probs=15.5
Q ss_pred EEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 46 LVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 46 lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
+|+||.+ ++=.++++...+.|-+|+.+.
T Consensus 4 lVtGatG-~iG~~l~~~L~~~g~~V~~~~ 31 (221)
T 3ew7_A 4 GIIGATG-RAGSRILEEAKNRGHEVTAIV 31 (221)
T ss_dssp EEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEcCCc-hhHHHHHHHHHhCCCEEEEEE
Confidence 5566554 555555555555555555553
No 122
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=41.27 E-value=41 Score=28.68 Aligned_cols=61 Identities=13% Similarity=0.195 Sum_probs=38.6
Q ss_pred eEeecCCh-HHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHH
Q 044681 90 EVKPVDHM-HQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKEL 153 (184)
Q Consensus 90 ~~~~~~~~-~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~ 153 (184)
.+.+.+.+ ...-..++..||++|.=. |++. .|+..+ ++|+++ .+.+..|++++
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~~--~EA~a~------g~PvV~~~~~~~~~e~v~~g~~~lv~~d~~~l 351 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS---GGVQ--EEAPGM------GVPVLVLRDTTERPEGIEAGTLKLIGTNKENL 351 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC---HHHH--HHGGGT------TCCEEECCSSCSCHHHHHHTSEEECCSCHHHH
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC---ccHH--HHHHHh------CCCEEEecCCCcchhheeCCcEEEcCCCHHHH
Confidence 35555544 345666778899876433 4554 455544 899997 33333489999
Q ss_pred HHHhhhhc
Q 044681 154 VQKLEDYE 161 (184)
Q Consensus 154 ~~~l~~~~ 161 (184)
.+.+.+..
T Consensus 352 ~~ai~~ll 359 (403)
T 3ot5_A 352 IKEALDLL 359 (403)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887653
No 123
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=41.21 E-value=1e+02 Score=22.38 Aligned_cols=72 Identities=14% Similarity=0.017 Sum_probs=33.2
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHH--HHHHHHhCCEEEEecCccc
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQR--KAEMARYADCFIVLPGGFG 119 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~R--k~~m~~~sDa~IvlPGG~G 119 (184)
.+|+||.+ ++=.++++...+.|-+|+.+.-+.....+.....+ +. +..++... -...++..|++|-+.|...
T Consensus 6 ilVtGatG-~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~-~~~D~~~~~~~~~~~~~~d~vi~~a~~~~ 79 (206)
T 1hdo_A 6 IAIFGATG-QTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPA-HV-VVGDVLQAADVDKTVAGQDAVIVLLGTRN 79 (206)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCS-EE-EESCTTSHHHHHHHHTTCSEEEECCCCTT
T ss_pred EEEEcCCc-HHHHHHHHHHHHCCCeEEEEEeChhhcccccCCce-EE-EEecCCCHHHHHHHHcCCCEEEECccCCC
Confidence 35566554 55555555555555555555321110001001111 22 22333222 2233466899998887654
No 124
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=40.98 E-value=52 Score=25.44 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=23.9
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
+...++|.|.|+++ -..+++++.|+++|+.++...
T Consensus 10 ~~~~k~vlITGas~--------giG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 10 VMSQRIAYVTGGMG--------GIGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp ---CEEEEETTTTS--------HHHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCCEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEe
Confidence 34456777777765 267778888888999887644
No 125
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=40.83 E-value=52 Score=25.68 Aligned_cols=21 Identities=10% Similarity=0.172 Sum_probs=15.7
Q ss_pred chhHHHHHHHHhcCCeEEEEe
Q 044681 54 GLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 54 GlM~a~a~ga~~~GG~viGvi 74 (184)
|+++++.+.+...+++.|||+
T Consensus 102 ~i~~~~~~~a~~~~~~rigvl 122 (228)
T 1jfl_A 102 SMIEETAKKVKELGFKKAGLL 122 (228)
T ss_dssp CHHHHHHHHHHHTTCSEEEEE
T ss_pred chHHHHHHHHHHcCCCeEEEE
Confidence 567777777776677788887
No 126
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=40.82 E-value=26 Score=31.54 Aligned_cols=35 Identities=11% Similarity=0.127 Sum_probs=20.1
Q ss_pred CCEEEE--e--cCccccH-HHHHHHHHHHHhCC-CCCCEEE
Q 044681 108 ADCFIV--L--PGGFGTL-EKLFEVTTWSQLGV-HNKPVAI 142 (184)
Q Consensus 108 sDa~Iv--l--PGG~GTL-~El~~~l~~~qlg~-~~kPvvl 142 (184)
.|++++ + |+..-.. +++++++.-.+-.. .+||+++
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~ 369 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYA 369 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEE
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEE
Confidence 366666 4 6665554 78887775433221 2689644
No 127
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=40.73 E-value=47 Score=28.65 Aligned_cols=35 Identities=23% Similarity=0.294 Sum_probs=28.0
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
+..|+|||+-| .=||+|-+.+|+++- ...+|||||
T Consensus 100 ~~~dG~VItHG-TDTmeeTA~~Ls~~l-~~~~kPVVl 134 (358)
T 2him_A 100 DDYDGFVILHG-TDTMAYTASALSFML-ENLGKPVIV 134 (358)
T ss_dssp GGCSEEEEECC-STTHHHHHHHHHHHE-ETCCSCEEE
T ss_pred hcCCeEEEecC-chHHHHHHHHHHHHH-hcCCCCEEE
Confidence 45799999974 789999999998852 235799999
No 128
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=40.25 E-value=44 Score=27.38 Aligned_cols=83 Identities=10% Similarity=-0.016 Sum_probs=44.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEeec--CChHHHHHHHHHhCCEEEEecCccc
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELT-GVTLGEVKPV--DHMHQRKAEMARYADCFIVLPGGFG 119 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~-~~~~~~~~~~--~~~~~Rk~~m~~~sDa~IvlPGG~G 119 (184)
...||+|+|+.|++- .+-|+..|.+|+++-.+.. ..+.. .-..+..+.. .++.++-.......|.+|...|+--
T Consensus 168 ~~VlV~GaG~vG~~a--~qla~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 168 QWVVISGIGGLGHVA--VQYARAMGLRVAAVDIDDA-KLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp SEEEEECCSTTHHHH--HHHHHHTTCEEEEEESCHH-HHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHHHH--HHHHHHCCCeEEEEeCCHH-HHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 456778887767654 4566677889999854321 11111 1112223322 2333222211224577777777777
Q ss_pred cHHHHHHHH
Q 044681 120 TLEKLFEVT 128 (184)
Q Consensus 120 TL~El~~~l 128 (184)
++++.+..+
T Consensus 245 ~~~~~~~~l 253 (340)
T 3s2e_A 245 AFSQAIGMV 253 (340)
T ss_dssp HHHHHHHHE
T ss_pred HHHHHHHHh
Confidence 777766654
No 129
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=40.07 E-value=1.4e+02 Score=23.81 Aligned_cols=12 Identities=17% Similarity=0.180 Sum_probs=9.4
Q ss_pred hCCEEEEecCcc
Q 044681 107 YADCFIVLPGGF 118 (184)
Q Consensus 107 ~sDa~IvlPGG~ 118 (184)
.-|.+|-..|..
T Consensus 128 ~iD~lv~nAg~~ 139 (294)
T 3r3s_A 128 GLDILALVAGKQ 139 (294)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCc
Confidence 469999988854
No 130
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=39.70 E-value=97 Score=24.49 Aligned_cols=18 Identities=22% Similarity=0.407 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHCCCeEEE
Q 044681 31 AAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~ 48 (184)
..+++++.|+++|+.++.
T Consensus 39 IG~aia~~la~~G~~Vv~ 56 (267)
T 3u5t_A 39 IGAAIAARLASDGFTVVI 56 (267)
T ss_dssp HHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 444555555556665553
No 131
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=39.67 E-value=42 Score=24.89 Aligned_cols=30 Identities=10% Similarity=0.185 Sum_probs=21.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|+|.|.|++. -..+.+.+.|+++|+.|+.-
T Consensus 1 MkvlVtGatG--------~iG~~l~~~L~~~g~~V~~~ 30 (221)
T 3ew7_A 1 MKIGIIGATG--------RAGSRILEEAKNRGHEVTAI 30 (221)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEcCCc--------hhHHHHHHHHHhCCCEEEEE
Confidence 4688999775 35667777777788776643
No 132
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=39.48 E-value=1.1e+02 Score=23.84 Aligned_cols=54 Identities=15% Similarity=0.190 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.++.- .....--+...+...+.|+.+..+
T Consensus 9 k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (259)
T 3edm_A 9 RTIVVAGAGR--------DIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63 (259)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEE
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEE
Confidence 5677777765 25677777888888888754 332233333333333445544444
No 133
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=39.31 E-value=40 Score=27.94 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=20.3
Q ss_pred EcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 48 YGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 48 ~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.-||. |-|-.+++.....+-.++||-
T Consensus 81 ~~GGD-GT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 81 VLGGD-GTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp EEECH-HHHHHHHHHHHHHTCCEEEEE
T ss_pred EEeCC-HHHHHHHHHhccCCCCEEEEe
Confidence 44557 988888888887777889984
No 134
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=38.90 E-value=59 Score=27.58 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 30 KAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 30 ~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
+.++++++.|-++|..+|+.... .| .+.+.|.+.|-.+||+=
T Consensus 195 ~kg~~~a~~l~~~G~DvIf~~~d--~~-Gv~~aa~e~Gv~vIG~D 236 (356)
T 3s99_A 195 GKEADAAKALIDQGVDIITQHTD--ST-AAIQVAHDRGIKAFGQA 236 (356)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSS--SS-HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEECCC--ch-HHHHHHHHcCCEEEEEc
Confidence 46777788888889999976643 24 45567888999999993
No 135
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=38.85 E-value=56 Score=27.91 Aligned_cols=34 Identities=21% Similarity=0.258 Sum_probs=27.8
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
+..|+||+.- |.=||+|-+..|+++- ..+||||+
T Consensus 87 ~~~dGvVItH-GTDTm~~TA~~L~~~l--~~~kPVVl 120 (334)
T 3nxk_A 87 EGIDGVVITH-GTDTMEETAYFLNLTI--KSDKPVVL 120 (334)
T ss_dssp TTCCEEEEEC-CSTTHHHHHHHHHHHC--CCCSCEEE
T ss_pred cCCCeEEEEC-CCchHHHHHHHHHHHc--CCCCCEEE
Confidence 4579999886 4789999999998753 35899999
No 136
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=38.58 E-value=41 Score=26.75 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=0.0
Q ss_pred CccccccccC-CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 1 MEEKKEAKSR-FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 1 ~~~~~~~~~~-~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
|+++...+.. +++|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 1 ~~~~~~~~~~~~~~vlVTGatG--------~iG~~l~~~L~~~G~~V~~ 41 (321)
T 2pk3_A 1 MRGSHHHHHHGSMRALITGVAG--------FVGKYLANHLTEQNVEVFG 41 (321)
T ss_dssp ------------CEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCCcccccccCcceEEEECCCC--------hHHHHHHHHHHHCCCEEEE
No 137
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.54 E-value=65 Score=25.52 Aligned_cols=43 Identities=9% Similarity=0.163 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEE
Q 044681 31 AAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGv 73 (184)
..+++++.|+++|+.++.-.. ...-.+.+.+...+.++.+..+
T Consensus 40 IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dmm_A 40 IGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83 (269)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE
Confidence 455666666777776654332 2233344444344445555444
No 138
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=38.34 E-value=89 Score=24.52 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=30.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC---cchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN---VGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~---~GlM~a~a~ga~~~GG~viGv 73 (184)
+++.|-|+++ -..+++++.|+++|+.++.-+.. .--.+.+.+...+.|+++..+
T Consensus 12 k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (262)
T 3ksu_A 12 KVIVIAGGIK--------NLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68 (262)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEE
Confidence 5677777665 25667777778888887764321 012233333334445555544
No 139
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.29 E-value=87 Score=24.44 Aligned_cols=54 Identities=15% Similarity=0.117 Sum_probs=27.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.++.+..+
T Consensus 30 k~vlITGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 83 (262)
T 3rkr_A 30 QVAVVTGASR--------GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH 83 (262)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEE
Confidence 4555666554 25566666677777776655444222223333333344544443
No 140
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=38.22 E-value=45 Score=28.35 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=27.5
Q ss_pred HhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 106 RYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 106 ~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
+..|+||++-| .=||+|-+.+|+++-. ..+||||+
T Consensus 72 ~~~dG~VItHG-TDTmeeTA~~Ls~ll~-~~~kPVVl 106 (328)
T 1wls_A 72 WEYDGIVITHG-TDTMAYSASMLSFMLR-NPPIPIVL 106 (328)
T ss_dssp TTCSEEEEECC-GGGHHHHHHHHHHHEE-SCSSEEEE
T ss_pred ccCCeEEEEcC-CchHHHHHHHHHHHHh-CCCCCEEE
Confidence 35799999974 7899999999985322 35799999
No 141
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=37.98 E-value=69 Score=25.93 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 31 AAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.-+++++.|+++|..|+.-+-..---+.+++...+.|++++.+
T Consensus 21 IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~ 63 (255)
T 4g81_D 21 LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGV 63 (255)
T ss_dssp HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 6677888889999999877765333344455555677777776
No 142
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=37.98 E-value=59 Score=25.25 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.+..++++.|.|+++ -..+++++.|+++|+.++.- ......-+.+.+-..+.+.++.-+
T Consensus 3 ~~~~~k~vlVTGas~--------gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (264)
T 3i4f_A 3 LGRFVRHALITAGTK--------GLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFV 62 (264)
T ss_dssp ---CCCEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEE
T ss_pred cccccCEEEEeCCCc--------hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEE
No 143
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=37.57 E-value=14 Score=30.62 Aligned_cols=49 Identities=20% Similarity=0.133 Sum_probs=31.2
Q ss_pred hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-----------EEEecCCHHHHHHHhhh
Q 044681 107 YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-----------IMVSASNAKELVQKLED 159 (184)
Q Consensus 107 ~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-----------~i~~~~~~~e~~~~l~~ 159 (184)
..|. |+.-||=||++|+...+.-. ..+.|+.+ .+-...|++++++.|.+
T Consensus 63 ~~d~-vv~~GGDGTl~~v~~~l~~~---~~~~~l~iiP~Gt~N~~ar~lg~~~~~~~a~~~i~~ 122 (304)
T 3s40_A 63 KVDL-IIVFGGDGTVFECTNGLAPL---EIRPTLAIIPGGTCNDFSRTLGVPQNIAEAAKLITK 122 (304)
T ss_dssp TCSE-EEEEECHHHHHHHHHHHTTC---SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHTT
T ss_pred CCCE-EEEEccchHHHHHHHHHhhC---CCCCcEEEecCCcHHHHHHHcCCCccHHHHHHHHHh
Confidence 3465 45568999999998876321 13456655 22234578888888765
No 144
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=37.35 E-value=90 Score=24.51 Aligned_cols=54 Identities=13% Similarity=0.068 Sum_probs=32.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.++.- .....--+.+.+...+.|+++..+
T Consensus 19 k~~lVTGas~--------gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (270)
T 3is3_A 19 KVALVTGSGR--------GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAI 73 (270)
T ss_dssp CEEEESCTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4566666654 25667777888888888753 322233444445455566666655
No 145
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=37.22 E-value=46 Score=26.65 Aligned_cols=33 Identities=12% Similarity=0.157 Sum_probs=24.4
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++..|++|+|+|.+. .....+++.|+++|+.++
T Consensus 7 ~~~mmm~I~iIG~tG--------~mG~~la~~l~~~g~~V~ 39 (286)
T 3c24_A 7 NDVGPKTVAILGAGG--------KMGARITRKIHDSAHHLA 39 (286)
T ss_dssp CSCCCCEEEEETTTS--------HHHHHHHHHHHHSSSEEE
T ss_pred ccccCCEEEEECCCC--------HHHHHHHHHHHhCCCEEE
Confidence 344467999999732 366778888899998775
No 146
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=37.18 E-value=48 Score=24.74 Aligned_cols=33 Identities=12% Similarity=0.201 Sum_probs=23.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|++. -..+.+.+.|+++|+.|+.-...
T Consensus 1 MkilVtGatG--------~iG~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGATG--------RAGSAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcCCC--------HHHHHHHHHHHHCCCEEEEEEec
Confidence 3588888875 36677778888888887654433
No 147
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=37.13 E-value=1.3e+02 Score=22.67 Aligned_cols=105 Identities=17% Similarity=0.157 Sum_probs=0.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEE-EecCccccccccCCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLG-IIPRALMKKELTGVTL 88 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viG-viP~~~~~~e~~~~~~ 88 (184)
+|+|.|.|+++ -..+++.+.|+++|+.++.- +....-.+.+.+...+.+..+.- + .-.+
T Consensus 1 ~k~vlITGasg--------giG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----------~~D~ 61 (245)
T 2ph3_A 1 MRKALITGASR--------GIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVL-----------GANL 61 (245)
T ss_dssp CCEEEETTTTS--------HHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEE-----------ECCT
T ss_pred CCEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEE-----------eccC
Q ss_pred ceEeecCChHHHHHHHHHhCCEEEEecCccc-------cHHHHHHHHHHHHhC
Q 044681 89 GEVKPVDHMHQRKAEMARYADCFIVLPGGFG-------TLEKLFEVTTWSQLG 134 (184)
Q Consensus 89 ~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~G-------TL~El~~~l~~~qlg 134 (184)
++......+.++-.--...-|++|-..|-.. +.+++-..+..+-.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g 114 (245)
T 2ph3_A 62 LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSA 114 (245)
T ss_dssp TSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHH
No 148
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=36.83 E-value=1.5e+02 Score=23.71 Aligned_cols=77 Identities=14% Similarity=0.059 Sum_probs=42.4
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeec---CChHHHHHHHHHh--CCEEEEecCcc
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPV---DHMHQRKAEMARY--ADCFIVLPGGF 118 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~---~~~~~Rk~~m~~~--sDa~IvlPGG~ 118 (184)
..|||||+. |+=.+.++...+.|.+|+..--+...-.+...... ..+. .+-..-++++-+. =|.+|---|-.
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~--~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi~ 89 (242)
T 4b79_A 13 QVLVTGGSS-GIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRI--RREELDITDSQRLQRLFEALPRLDVLVNNAGIS 89 (242)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTE--EEEECCTTCHHHHHHHHHHCSCCSEEEECCCCC
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCe--EEEEecCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 457899988 99889999888888888765211100001111111 1222 2333334444333 38888877766
Q ss_pred ccHHH
Q 044681 119 GTLEK 123 (184)
Q Consensus 119 GTL~E 123 (184)
+.++|
T Consensus 90 ~~~~~ 94 (242)
T 4b79_A 90 RDREE 94 (242)
T ss_dssp CGGGG
T ss_pred CCccc
Confidence 65443
No 149
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=36.77 E-value=29 Score=27.01 Aligned_cols=41 Identities=24% Similarity=0.212 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCCC-hHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYK-YCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~-~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
+.|.=||||....+ +...+.++++.++.......||.|||+
T Consensus 2 ~iViK~GGs~l~~~~~~~~~~~~~i~~l~~g~~vvlV~ggG~ 43 (219)
T 2ij9_A 2 KVVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGGK 43 (219)
T ss_dssp EEEEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECCHH
T ss_pred eEEEEeChhhhCChHHHHHHHHHHHHHHcCCCEEEEEECcch
Confidence 46677888887542 444556666655433233478899865
No 150
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=36.76 E-value=1.3e+02 Score=23.59 Aligned_cols=62 Identities=11% Similarity=-0.090 Sum_probs=0.0
Q ss_pred ccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 4 KKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 4 ~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+.-.+-..++|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.++.+.-+
T Consensus 24 ~~~~~l~~k~vlITGasg--------gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (272)
T 1yb1_A 24 KRRKSVTGEIVLITGAGH--------GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85 (272)
T ss_dssp -CCCCCTTCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CcccccCCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEE
No 151
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=36.60 E-value=14 Score=30.93 Aligned_cols=48 Identities=15% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-----------EEEecCCHHHHHHHhhh
Q 044681 108 ADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-----------IMVSASNAKELVQKLED 159 (184)
Q Consensus 108 sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-----------~i~~~~~~~e~~~~l~~ 159 (184)
.|.+| .-||=||+.|+...+.. . ..+.|+.+ .+-...+++++++.|.+
T Consensus 81 ~d~vv-v~GGDGTv~~v~~~l~~--~-~~~~pl~iIP~GT~N~lAr~Lg~~~~~~~al~~i~~ 139 (337)
T 2qv7_A 81 YDVLI-AAGGDGTLNEVVNGIAE--K-PNRPKLGVIPMGTVNDFGRALHIPNDIMGALDVIIE 139 (337)
T ss_dssp CSEEE-EEECHHHHHHHHHHHTT--C-SSCCEEEEEECSSCCHHHHHTTCCSSHHHHHHHHHH
T ss_pred CCEEE-EEcCchHHHHHHHHHHh--C-CCCCcEEEecCCcHhHHHHHcCCCCCHHHHHHHHHc
Confidence 45555 46899999999987721 1 13567666 22234678888888765
No 152
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=36.57 E-value=1.6e+02 Score=23.30 Aligned_cols=60 Identities=13% Similarity=0.202 Sum_probs=32.7
Q ss_pred HHHHHHHHhCCEEEEecCcccc--HHHHHHHH-HHHHhCCCCCCEEE--EEEecCCHHHHHHHhhhh
Q 044681 99 QRKAEMARYADCFIVLPGGFGT--LEKLFEVT-TWSQLGVHNKPVAI--IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 99 ~Rk~~m~~~sDa~IvlPGG~GT--L~El~~~l-~~~qlg~~~kPvvl--~i~~~~~~~e~~~~l~~~ 160 (184)
++-+.+.+..+.-|+.-||+++ .+++.+.+ .+.+.|... +.+ .++...+|.+.++.+.+.
T Consensus 192 ~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~g--v~vg~~i~~~~~~~~~~~~l~~~ 256 (273)
T 2qjg_A 192 DSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAG--VAVGRNIFQHDDVVGITRAVCKI 256 (273)
T ss_dssp HHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHHHHHHHTCSE--EECCHHHHTSSSHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcE--EEeeHHhhCCCCHHHHHHHHHHH
Confidence 3344455556777777888885 66655522 233455431 111 233446777777666653
No 153
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=36.54 E-value=1.1e+02 Score=23.81 Aligned_cols=54 Identities=11% Similarity=0.021 Sum_probs=31.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (262)
T 1zem_A 8 KVCLVTGAGG--------NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSY 61 (262)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 5777778765 35677788888889887765544222223333333345555444
No 154
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=36.44 E-value=1.1e+02 Score=23.64 Aligned_cols=54 Identities=15% Similarity=0.199 Sum_probs=30.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.++++..+
T Consensus 3 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 56 (256)
T 1geg_A 3 KVALVTGAGQ--------GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAV 56 (256)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4677777765 35667777888888887755443222223333333345555444
No 155
>1mqs_A SLY1 protein, SLY1P; SM-protein, snare, syntaxin, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: e.25.1.1
Probab=36.42 E-value=54 Score=30.33 Aligned_cols=52 Identities=13% Similarity=0.314 Sum_probs=39.7
Q ss_pred CCEEEEecCccccHHHHHHHHHHHHhC-CCCCCEEEEEEecCCHHHHHHHhhhh
Q 044681 108 ADCFIVLPGGFGTLEKLFEVTTWSQLG-VHNKPVAIIMVSASNAKELVQKLEDY 160 (184)
Q Consensus 108 sDa~IvlPGG~GTL~El~~~l~~~qlg-~~~kPvvl~i~~~~~~~e~~~~l~~~ 160 (184)
.+++|++-|| +|..|+..+..|.+.. ..++-|++.-...-++.+.++.|.+.
T Consensus 609 ~~viVFvVGG-~Ty~E~~~l~~l~~~~~~~~~~viiGsT~I~n~~~Fl~~l~~l 661 (671)
T 1mqs_A 609 NKSLVFVVGG-GNYLEYQNLQEWAHSQLHNPKKVMYGSTAITTPAEFLNEISRL 661 (671)
T ss_dssp SEEEEEEETC-BCHHHHHHHHHHHTTCCSSCCEEEEEESSBCCHHHHHHHHHHH
T ss_pred CeEEEEEECC-ccHHHHHHHHHHHhhccCCCceEEEeeccccCHHHHHHHHHHh
Confidence 6788888888 6999999999887642 22566777656667899999888764
No 156
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=36.39 E-value=79 Score=25.44 Aligned_cols=58 Identities=17% Similarity=0.121 Sum_probs=41.0
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE--EcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV--YGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV--~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.+..+.|.|+=+.+. +.+..+++.|.+.|+.++ +-=.+ +-++++..=..+....+||.
T Consensus 10 ~~~~~vi~Vir~~~~-------~~a~~~a~al~~gGi~~iEvt~~t~-~a~~~I~~l~~~~p~~~IGA 69 (217)
T 3lab_A 10 ANTKPLIPVIVIDDL-------VHAIPMAKALVAGGVHLLEVTLRTE-AGLAAISAIKKAVPEAIVGA 69 (217)
T ss_dssp TTSCSEEEEECCSCG-------GGHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTSEEEE
T ss_pred HhhCCEEEEEEcCCH-------HHHHHHHHHHHHcCCCEEEEeCCCc-cHHHHHHHHHHHCCCCeEee
Confidence 345678888876554 578888999999998877 44444 66777766555566677887
No 157
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=36.29 E-value=1.1e+02 Score=25.13 Aligned_cols=55 Identities=20% Similarity=0.274 Sum_probs=36.6
Q ss_pred HHHHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE----------------EEEecCCHHHHHHHhhhh
Q 044681 99 QRKAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI----------------IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 99 ~Rk~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl----------------~i~~~~~~~e~~~~l~~~ 160 (184)
+...-+...||++|.-. .|+|+- +.|++.. ++|||. .++-..|++++.+.|.+.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~--~~Eama~------G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l 388 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLV--AMEAQAS------GTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATL 388 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHH--HHHHHHT------TCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECccccCCchH--HHHHHHc------CCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence 34455668899877543 244532 5666654 899998 344446899999998876
Q ss_pred c
Q 044681 161 E 161 (184)
Q Consensus 161 ~ 161 (184)
.
T Consensus 389 ~ 389 (438)
T 3c48_A 389 L 389 (438)
T ss_dssp H
T ss_pred H
Confidence 4
No 158
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=36.28 E-value=1.8e+02 Score=23.97 Aligned_cols=105 Identities=13% Similarity=0.046 Sum_probs=57.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHh-cCCeEEEEecCccccccccCCCCc
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHR-GRRHVLGIIPRALMKKELTGVTLG 89 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~-~GG~viGviP~~~~~~e~~~~~~~ 89 (184)
.+.|++.-+|+......-.+.-.+|++.|.++|+.+|.=|++ .=-+ .++...+ .+..+
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~-~e~~-~~~~i~~~~~~~~------------------- 243 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGP-MDLE-MVQPVVEQMETKP------------------- 243 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCT-TTHH-HHHHHHHTCSSCC-------------------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCc-chHH-HHHHHHHhccccc-------------------
Confidence 357888766654322111345566777777778888765555 3333 2232222 11111
Q ss_pred eEee--cCChHHHHHHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEEEEEecCCH
Q 044681 90 EVKP--VDHMHQRKAEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAIIMVSASNA 150 (184)
Q Consensus 90 ~~~~--~~~~~~Rk~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl~i~~~~~~ 150 (184)
+.+ ..++.+ ...++..||.+|..-.|.-.| +. . .++|++. ++-..+|
T Consensus 244 -~~l~g~~sl~e-~~ali~~a~~~i~~DsG~~Hl---Aa--a------~g~P~v~-lfg~t~p 292 (349)
T 3tov_A 244 -IVATGKFQLGP-LAAAMNRCNLLITNDSGPMHV---GI--S------QGVPIVA-LYGPSNP 292 (349)
T ss_dssp -EECTTCCCHHH-HHHHHHTCSEEEEESSHHHHH---HH--T------TTCCEEE-ECSSCCH
T ss_pred -EEeeCCCCHHH-HHHHHHhCCEEEECCCCHHHH---HH--h------cCCCEEE-EECCCCc
Confidence 111 124444 555668999999887766554 22 2 2789875 4445555
No 159
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=36.23 E-value=81 Score=25.64 Aligned_cols=52 Identities=17% Similarity=0.312 Sum_probs=35.7
Q ss_pred HHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE----------------EEEecCCHHHHHHHhhhhc
Q 044681 102 AEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI----------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 102 ~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl----------------~i~~~~~~~e~~~~l~~~~ 161 (184)
.-+...||++|.-. .|+|+- +.|+++. ++|||. .++-..|++++.+.|.+..
T Consensus 279 ~~~~~~adv~v~ps~~e~~~~~--~~EAma~------G~PvI~~~~~~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~ 348 (394)
T 2jjm_A 279 AELLAMSDLMLLLSEKESFGLV--LLEAMAC------GVPCIGTRVGGIPEVIQHGDTGYLCEVGDTTGVADQAIQLL 348 (394)
T ss_dssp HHHHHTCSEEEECCSCCSCCHH--HHHHHHT------TCCEEEECCTTSTTTCCBTTTEEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeccccCCCchH--HHHHHhc------CCCEEEecCCChHHHhhcCCceEEeCCCCHHHHHHHHHHHH
Confidence 34557899888643 344442 5666654 899988 4444569999999998764
No 160
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=36.23 E-value=1.1e+02 Score=24.26 Aligned_cols=31 Identities=10% Similarity=0.006 Sum_probs=22.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
++|.|.|+++ -..+++.+.|+++|+.|+..+
T Consensus 45 k~vlITGasg--------gIG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAGR--------GIGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHTTTSSEEEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHcCCEEEEEc
Confidence 5788888775 366677778888888887644
No 161
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=36.20 E-value=38 Score=24.71 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHH----CCCeEE---EcCCC-cchhHHHHHHHHhcC
Q 044681 28 YRKAAIDLGNELVS----KGLDLV---YGGGN-VGLMGLISEEVHRGR 67 (184)
Q Consensus 28 ~~~~A~~lG~~LA~----~G~~lV---~GGg~-~GlM~a~a~ga~~~G 67 (184)
-.++|+.+|++||+ .|+.=| -||.. -|-..|++++|.++|
T Consensus 62 n~~AA~~vG~llA~ra~~~GI~~vvfDrgg~~yhGrV~Ala~~are~G 109 (112)
T 3v2d_S 62 KTEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGG 109 (112)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCEEECTTSCSCSSTTHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHcC
Confidence 35789999999888 365433 25522 588999999999987
No 162
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=36.06 E-value=42 Score=26.19 Aligned_cols=33 Identities=9% Similarity=-0.008 Sum_probs=21.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
||+|.|.|+++- ..+++.+.|+++|+.|+.-+.
T Consensus 1 Mk~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF--------GGMGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST--------THHHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch--------HHHHHHHHHHHCCCEEEEEeC
Confidence 456777776652 456677777888888776544
No 163
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=35.92 E-value=24 Score=29.39 Aligned_cols=37 Identities=11% Similarity=0.140 Sum_probs=28.1
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+++|+|++|....+.+.=...|+.+.+.|-+.||.++
T Consensus 3 ~~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~ 39 (346)
T 3se7_A 3 HMKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPF 39 (346)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEE
Confidence 3466666665555566667899999999999999887
No 164
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=35.90 E-value=62 Score=25.30 Aligned_cols=33 Identities=24% Similarity=0.328 Sum_probs=20.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 7 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~ 39 (257)
T 3imf_A 7 KVVIITGGSS--------GMGKGMATRFAKEGARVVITGRT 39 (257)
T ss_dssp CEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4566666554 25666777777788877654443
No 165
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=35.75 E-value=48 Score=26.44 Aligned_cols=30 Identities=20% Similarity=0.337 Sum_probs=0.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|.|.|++. -....|.+.|.++|+.|+.
T Consensus 1 M~~ilVtGatG--------~iG~~l~~~L~~~g~~V~~ 30 (330)
T 2c20_A 1 MNSILICGGAG--------YIGSHAVKKLVDEGLSVVV 30 (330)
T ss_dssp -CEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCc--------HHHHHHHHHHHhCCCEEEE
No 166
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=35.69 E-value=45 Score=27.08 Aligned_cols=35 Identities=26% Similarity=0.462 Sum_probs=25.9
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE-EcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV-YGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV-~GGg~ 52 (184)
..++||.|+|+-. ..-|-=+.|.++||.|. ||.|.
T Consensus 25 ~Lr~avVCaSN~N-------RSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 25 PLRVAVVSSSNQN-------RSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp -CEEEEEESSSSS-------HHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEECCCCcc-------hhHHHHHHHHHCCCceEeecCCC
Confidence 3579999999863 34444567889999999 67766
No 167
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=35.67 E-value=1.4e+02 Score=23.37 Aligned_cols=104 Identities=15% Similarity=0.142 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHh-cCCeEEEEecCccccccccCCCCce
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHR-GRRHVLGIIPRALMKKELTGVTLGE 90 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~-~GG~viGviP~~~~~~e~~~~~~~~ 90 (184)
|+|.|-|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+ .++++..+ .-.+++
T Consensus 21 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~-----------~~Dv~~ 81 (266)
T 4egf_A 21 KRALITGATK--------GIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTV-----------AIDLAE 81 (266)
T ss_dssp CEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEE-----------ECCTTS
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEE-----------EecCCC
Q ss_pred EeecCChHHHHHHHHHhCCEEEEecCccc-------cHHHHHHHHHHHHhC
Q 044681 91 VKPVDHMHQRKAEMARYADCFIVLPGGFG-------TLEKLFEVTTWSQLG 134 (184)
Q Consensus 91 ~~~~~~~~~Rk~~m~~~sDa~IvlPGG~G-------TL~El~~~l~~~qlg 134 (184)
......+.++-.--...-|++|-..|-.. +.+++-..+..+-.+
T Consensus 82 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g 132 (266)
T 4egf_A 82 PDAPAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRA 132 (266)
T ss_dssp TTHHHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHH
No 168
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=35.59 E-value=50 Score=24.75 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=23.1
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCeE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVS-KGLDL 46 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~-~G~~l 46 (184)
.|++|.|+.+|..+ .-.+.|+.+.+.+.+ .|+.+
T Consensus 3 ~M~kiliiy~S~~G---nT~~~a~~i~~~l~~~~g~~v 37 (188)
T 2ark_A 3 AMGKVLVIYDTRTG---NTKKMAELVAEGARSLEGTEV 37 (188)
T ss_dssp CCEEEEEEECCSSS---HHHHHHHHHHHHHHTSTTEEE
T ss_pred CCCEEEEEEECCCc---HHHHHHHHHHHHHhhcCCCeE
Confidence 46677777777544 334678888888887 77644
No 169
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=35.32 E-value=1.1e+02 Score=24.51 Aligned_cols=56 Identities=23% Similarity=0.309 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCEEEEec---------CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHH
Q 044681 99 QRKAEMARYADCFIVLP---------GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELV 154 (184)
Q Consensus 99 ~Rk~~m~~~sDa~IvlP---------GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~ 154 (184)
+...-+...||++|... .|+|+ =+.|++.. ++||+. .++-.+|++++.
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a~------G~PvI~~~~~~~~e~i~~~~g~~~~~~d~~~l~ 335 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQAC------GVPVIAGTSGGAPETVTPATGLVVEGSDVDKLS 335 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHHT------TCCEEECSSTTGGGGCCTTTEEECCTTCHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCc--HHHHHHHc------CCCEEEeCCCChHHHHhcCCceEeCCCCHHHHH
Confidence 34445668899988743 44553 36666654 899998 334345999999
Q ss_pred HHhhhhcC
Q 044681 155 QKLEDYEP 162 (184)
Q Consensus 155 ~~l~~~~~ 162 (184)
+.|.+...
T Consensus 336 ~~i~~l~~ 343 (394)
T 3okp_A 336 ELLIELLD 343 (394)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99988654
No 170
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=35.21 E-value=1.3e+02 Score=23.40 Aligned_cols=12 Identities=25% Similarity=0.185 Sum_probs=9.1
Q ss_pred hCCEEEEecCcc
Q 044681 107 YADCFIVLPGGF 118 (184)
Q Consensus 107 ~sDa~IvlPGG~ 118 (184)
.-|++|-..|-.
T Consensus 88 ~id~lvnnAg~~ 99 (262)
T 3pk0_A 88 GIDVVCANAGVF 99 (262)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 468999888754
No 171
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=34.95 E-value=72 Score=25.60 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=27.0
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE-EcCCC
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV-YGGGN 52 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV-~GGg~ 52 (184)
....++||.|+|+.. ..-|-=+.|.++|+.|. ||-|.
T Consensus 7 ~~~l~~avVCaSN~N-------RSMEaH~~L~k~G~~V~SfGTGs 44 (198)
T 3p9y_A 7 PSKLAVAVVDSSNMN-------RSMEAHNFLAKKGFNVRSYGTGE 44 (198)
T ss_dssp TTCCEEEEEESSSSS-------HHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCceEEEEcCCCCc-------ccHHHHHHHHhCCCceeecCCCc
Confidence 344699999999864 33444467888999998 67666
No 172
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=34.59 E-value=50 Score=27.26 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=26.1
Q ss_pred cCCceEEEEcCCCCCC-------ChHHHHHHHHHHHHHHHCCCeEE
Q 044681 9 SRFKRVCVFCGSSPDY-------KYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~-------~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
..||+|++++..-... ..-....+.+|++.|+++||.+.
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~ 63 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVD 63 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEE
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 5678999999754321 01133568899999999988664
No 173
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=34.57 E-value=14 Score=29.71 Aligned_cols=38 Identities=16% Similarity=0.109 Sum_probs=27.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
.|+|+|++|....+.+.-...++.+.+.|.+.||.++.
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~ 40 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVP 40 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEE
Confidence 35777776655433444456788899999999998875
No 174
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=34.51 E-value=53 Score=26.53 Aligned_cols=34 Identities=18% Similarity=0.282 Sum_probs=22.4
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++..+|+|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 23 ~~~~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 56 (343)
T 2b69_A 23 MEKDRKRILITGGAG--------FVGSHLTDKLMMDGHEVTV 56 (343)
T ss_dssp ----CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred cccCCCEEEEEcCcc--------HHHHHHHHHHHHCCCEEEE
Confidence 334567899999875 3567777777788887764
No 175
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=34.44 E-value=52 Score=26.13 Aligned_cols=40 Identities=15% Similarity=-0.008 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHC----CCeEE---EcCCC-c--chhHHHHHHHHhcCC
Q 044681 29 RKAAIDLGNELVSK----GLDLV---YGGGN-V--GLMGLISEEVHRGRR 68 (184)
Q Consensus 29 ~~~A~~lG~~LA~~----G~~lV---~GGg~-~--GlM~a~a~ga~~~GG 68 (184)
.++|+.+|++||++ |+.-| -||.. . |-..|+++||.++|=
T Consensus 79 ~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~yh~GgRV~Ala~gAre~GL 128 (187)
T 1vq8_N 79 MPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGL 128 (187)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCBCEEECTTSCCCTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEcCCCceeccchHHHHHHHHhhcCCE
Confidence 57888999998883 65433 36632 2 899999999999874
No 176
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=34.39 E-value=96 Score=23.49 Aligned_cols=54 Identities=11% Similarity=0.044 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE-cCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY-GGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~-GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|.|+++ -..+++.+.|+++|+.++. .+....-.+.+.+...+.++.+.-+
T Consensus 2 k~vlVTGasg--------giG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 56 (244)
T 1edo_A 2 PVVVVTGASR--------GIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITF 56 (244)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
No 177
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=34.19 E-value=56 Score=26.33 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=17.2
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 5 vlVTGas~-GIG~aia~~la~~Ga~V~~~ 32 (247)
T 3ged_A 5 VIVTGGGH-GIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEecCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45666665 66666666666666665544
No 178
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=34.18 E-value=1.5e+02 Score=23.47 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=12.7
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLG 72 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viG 72 (184)
.|||||+. |+=.++++...+.|-+|+.
T Consensus 34 ~lVTGas~-GIG~aia~~la~~G~~V~~ 60 (271)
T 3v2g_A 34 AFVTGGSR-GIGAAIAKRLALEGAAVAL 60 (271)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEE
Confidence 34455444 4444444444444444443
No 179
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=34.16 E-value=1.3e+02 Score=23.29 Aligned_cols=33 Identities=24% Similarity=0.159 Sum_probs=24.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 10 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSR--------GIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 6788888775 36677888888899988765543
No 180
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=34.11 E-value=1.3e+02 Score=23.22 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=0.0
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE-EEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL-VYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l-V~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+-..|++.|-|+++ -..+++++.|+++|+.+ +.......-.+.+.+...+.|+.+..+
T Consensus 1 Ml~~k~~lVTGas~--------gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (246)
T 3osu_A 1 MKMTKSALVTGASR--------GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI 59 (246)
T ss_dssp CCCSCEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCCCCEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
No 181
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=33.90 E-value=63 Score=28.72 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=28.0
Q ss_pred hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 107 YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 107 ~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..|+||++-| .=||+|-+.+|+++- ..+|||||
T Consensus 167 ~~DG~VItHG-TDTMeeTA~~Lsl~l--~~~KPVVl 199 (435)
T 2d6f_A 167 GADGVVVAHG-TDTMHYTSAALSFML--RTPVPVVF 199 (435)
T ss_dssp TCSEEEEECC-TTTHHHHHHHHHHHE--ECSSCEEE
T ss_pred CCCeEEEEcC-cchHHHHHHHHHHHh--CCCCCEEE
Confidence 5799999974 789999999999864 45899999
No 182
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=33.85 E-value=41 Score=28.53 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=27.4
Q ss_pred hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 107 YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 107 ~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..|+|||+-| .=||+|-+.+|+++- . .+|||||
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVl 117 (327)
T 1o7j_A 85 DVDGVVITHG-TDTVEESAYFLHLTV-K-SDKPVVF 117 (327)
T ss_dssp TCCEEEEECC-STTHHHHHHHHHHHC-C-CCSCEEE
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh-C-CCCCEEE
Confidence 3689999974 789999999998853 3 6899999
No 183
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=33.80 E-value=47 Score=24.79 Aligned_cols=31 Identities=13% Similarity=0.116 Sum_probs=18.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD 45 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 45 (184)
||+|.|+.+| .+ .-.+.|+.+.+.+.+.|+.
T Consensus 4 mmkilii~~S-~g---~T~~la~~i~~~l~~~g~~ 34 (199)
T 2zki_A 4 KPNILVLFYG-YG---SIVELAKEIGKGAEEAGAE 34 (199)
T ss_dssp CCEEEEEECC-SS---HHHHHHHHHHHHHHHHSCE
T ss_pred CcEEEEEEeC-cc---HHHHHHHHHHHHHHhCCCE
Confidence 4455555555 43 2345777777777666654
No 184
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=33.67 E-value=80 Score=24.70 Aligned_cols=32 Identities=13% Similarity=0.181 Sum_probs=20.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 12 k~~lVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGAR--------RIGHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2556677777777877775544
No 185
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=33.59 E-value=54 Score=26.20 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=16.7
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|.|.|++. -..+.+.+.|.++|+.|+.
T Consensus 1 M~~vlVTGatG--------~iG~~l~~~L~~~g~~V~~ 30 (347)
T 1orr_A 1 MAKLLITGGCG--------FLGSNLASFALSQGIDLIV 30 (347)
T ss_dssp -CEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CcEEEEeCCCc--------hhHHHHHHHHHhCCCEEEE
Confidence 35666666654 2455555566666666553
No 186
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=33.40 E-value=8.1 Score=31.09 Aligned_cols=35 Identities=14% Similarity=0.324 Sum_probs=25.5
Q ss_pred CCEEEEecCccccHHHHHHHHHHHHhC-------CCCCCEEE
Q 044681 108 ADCFIVLPGGFGTLEKLFEVTTWSQLG-------VHNKPVAI 142 (184)
Q Consensus 108 sDa~IvlPGG~GTL~El~~~l~~~qlg-------~~~kPvvl 142 (184)
+|++|+.|=..+||.-++.-++-.-+- ..++|+++
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~Lk~~~plvl 136 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVALKERRPLVL 136 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHHHHTCCEEE
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHHhcCCcEEE
Confidence 899999999999999887644322111 13789998
No 187
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=33.19 E-value=72 Score=23.63 Aligned_cols=33 Identities=12% Similarity=0.099 Sum_probs=21.1
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL 46 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 46 (184)
|++|.|+.+|..+ .-.+.|+.+.+.+.+.|+.+
T Consensus 5 M~kilii~~S~~g---~T~~la~~i~~~l~~~g~~v 37 (200)
T 2a5l_A 5 SPYILVLYYSRHG---ATAEMARQIARGVEQGGFEA 37 (200)
T ss_dssp CCEEEEEECCSSS---HHHHHHHHHHHHHHHTTCEE
T ss_pred cceEEEEEeCCCC---hHHHHHHHHHHHHhhCCCEE
Confidence 4466666666533 33467788888887777654
No 188
>2r3b_A YJEF-related protein; putative kinase in the ribokinase-like superfamily, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Enterococcus faecalis} PDB: 2r3e_A
Probab=33.08 E-value=2.1e+02 Score=23.72 Aligned_cols=95 Identities=15% Similarity=0.068 Sum_probs=44.5
Q ss_pred CCCeEEEcCCCcchhHHHHHH---HHhcC-CeEEEEecCcccc-ccccCCCCceEeec--CChHHHHHHHHHhCCEEEEe
Q 044681 42 KGLDLVYGGGNVGLMGLISEE---VHRGR-RHVLGIIPRALMK-KELTGVTLGEVKPV--DHMHQRKAEMARYADCFIVL 114 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~g---a~~~G-G~viGviP~~~~~-~e~~~~~~~~~~~~--~~~~~Rk~~m~~~sDa~Ivl 114 (184)
.|..++-||.. +..+|.... +...| |.|.-++|..... .....+ +++.. .+. +.-.-+++.+|++++=
T Consensus 44 ~G~vlvIaGsd-~~~GA~ilA~~aal~~Gaglvt~~t~~~~~~~v~~~~p---e~~~~~~~~~-~ql~~~~~~~dav~IG 118 (310)
T 2r3b_A 44 FGRVVLIGGNR-QYGGAIIMSTEACINSGAGLTTVITDVKNHGPLHARCP---EAMVVGFEET-VLLTNVVEQADVILIG 118 (310)
T ss_dssp GCEEEEECCCS-SSHHHHHHHHHHHHHHTCSEEEEECCGGGHHHHHHHCT---TCEEECTTCH-HHHHHHHHHCSEEEEC
T ss_pred CCEEEEEECCC-CCCcHHHHHHHHHHHhCcCcEEEEEChhhHhHHhhCCh---hheEecCCcH-HHHHHHhccCCEEEEe
Confidence 47788888877 767766444 33455 4445554432211 000111 12211 111 2223345678988885
Q ss_pred cCccccHHHHHHHHHH-HHhCCCCCCEEE
Q 044681 115 PGGFGTLEKLFEVTTW-SQLGVHNKPVAI 142 (184)
Q Consensus 115 PGG~GTL~El~~~l~~-~qlg~~~kPvvl 142 (184)
|| .|+-+|..+++.. .+.-..++|+|+
T Consensus 119 ~G-l~~~~~~~~~v~~~l~~~~~~~pvVl 146 (310)
T 2r3b_A 119 PG-LGLDATAQQILKMVLAQHQKQQWLII 146 (310)
T ss_dssp TT-CCSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred CC-CCCCHHHHHHHHHHHHhcCCCCcEEE
Confidence 54 4443333333322 111114678887
No 189
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=33.02 E-value=1.9e+02 Score=23.11 Aligned_cols=73 Identities=14% Similarity=0.043 Sum_probs=36.9
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCce-EeecCChHHHH--HHHHH--hCCEEEEecCccc
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGE-VKPVDHMHQRK--AEMAR--YADCFIVLPGGFG 119 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~-~~~~~~~~~Rk--~~m~~--~sDa~IvlPGG~G 119 (184)
.||+||.+ ++=.++++...+.|-.|+++.-+.....+.. ..+.. ..+..++.... ..+++ ..|++|-+.|-..
T Consensus 23 vlVTGasG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~~~ 100 (330)
T 2pzm_A 23 ILITGGAG-CLGSNLIEHWLPQGHEILVIDNFATGKREVL-PPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAAYK 100 (330)
T ss_dssp EEEETTTS-HHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-CSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCCCS
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEEECCCccchhhh-hccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence 56777765 6666667777777777777642110000000 11111 12233442222 22334 7899999887554
No 190
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=33.00 E-value=1.3e+02 Score=23.43 Aligned_cols=115 Identities=10% Similarity=0.008 Sum_probs=0.0
Q ss_pred CccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC-CCcchhHHHHHHHHhcCCeEEEEecCccc
Q 044681 1 MEEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG-GNVGLMGLISEEVHRGRRHVLGIIPRALM 79 (184)
Q Consensus 1 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG-g~~GlM~a~a~ga~~~GG~viGviP~~~~ 79 (184)
..+-...+...+++.|.|+++ -..+++++.|+++|+.++.-+ .....-+...+...+.+.++..+
T Consensus 15 ~~~~p~~~~~~k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 80 (269)
T 3gk3_A 15 QTQGPGSMQAKRVAFVTGGMG--------GLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY------ 80 (269)
T ss_dssp ---------CCCEEEETTTTS--------HHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEE------
T ss_pred CcCCchhhhcCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEE------
Q ss_pred cccccCCCCceEeecCChHHHHHHHHHhCCEEEEecCccc-------cHHHHHHHHHHHHhC
Q 044681 80 KKELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGFG-------TLEKLFEVTTWSQLG 134 (184)
Q Consensus 80 ~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~G-------TL~El~~~l~~~qlg 134 (184)
.-.+++..-...+.++-.--...-|.+|-..|-.. |.+++-..+..+-++
T Consensus 81 -----~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~ 137 (269)
T 3gk3_A 81 -----AVDVADFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDA 137 (269)
T ss_dssp -----ECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHH
T ss_pred -----EecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHH
No 191
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=32.97 E-value=94 Score=23.96 Aligned_cols=63 Identities=11% Similarity=-0.052 Sum_probs=0.0
Q ss_pred ccccccccCCceEEEEcCC--CCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 2 EEKKEAKSRFKRVCVFCGS--SPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 2 ~~~~~~~~~~~~I~Vfggs--~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..+.......|+|.|.|++ +- ..+++++.|+++|+.|+.-+.. .--....+...+..+.+..+
T Consensus 5 ~~~~~~~~~~k~vlITGa~~~~g--------iG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~ 69 (271)
T 3ek2_A 5 HHHHMGFLDGKRILLTGLLSNRS--------IAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFGSELVF 69 (271)
T ss_dssp ----CCTTTTCEEEECCCCSTTS--------HHHHHHHHHHHTTCEEEEEESS-GGGHHHHHHHHHHTTCCCEE
T ss_pred CCCCccccCCCEEEEeCCCCCCc--------HHHHHHHHHHHcCCCEEEEecc-hhhHHHHHHHHHHcCCcEEE
No 192
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=32.95 E-value=1.1e+02 Score=24.05 Aligned_cols=54 Identities=19% Similarity=0.193 Sum_probs=28.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|-|+++ -..+++++.|+++|+.++.-+. ....-+.+.+...+.+.++.-+
T Consensus 30 k~vlITGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (271)
T 4iin_A 30 KNVLITGASK--------GIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVI 84 (271)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEE
Confidence 4555666554 2556666677777777665443 2233344444344445444433
No 193
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=32.88 E-value=1.3e+02 Score=23.55 Aligned_cols=54 Identities=19% Similarity=0.054 Sum_probs=31.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+++.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.+..+..+
T Consensus 22 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 75 (273)
T 1ae1_A 22 TTALVTGGSK--------GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 75 (273)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCcc--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 5677777765 36677788888889888765544222222222223345555544
No 194
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.76 E-value=1.4e+02 Score=23.28 Aligned_cols=30 Identities=23% Similarity=0.235 Sum_probs=19.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|+|.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 11 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 11 KVVLVTGGAR--------GQGRSHAVKLAEEGADIILF 40 (287)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCeEEEE
Confidence 4666666654 25566677777777777643
No 195
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=32.75 E-value=54 Score=25.26 Aligned_cols=28 Identities=29% Similarity=0.327 Sum_probs=14.5
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.||+||.. |+=.++++...+.|-+|+.+
T Consensus 10 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (241)
T 1dhr_A 10 VLVYGGRG-ALGSRCVQAFRARNWWVASI 37 (241)
T ss_dssp EEEETTTS-HHHHHHHHHHHTTTCEEEEE
T ss_pred EEEECCCc-HHHHHHHHHHHhCCCEEEEE
Confidence 45555554 55555555555555554443
No 196
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=32.62 E-value=1.2e+02 Score=24.55 Aligned_cols=53 Identities=21% Similarity=0.220 Sum_probs=37.3
Q ss_pred HHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 101 KAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 101 k~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
..-+...||++|.-. .|+|.- +.|+++. ++||+. .++-.+|++++.+.|.+..
T Consensus 324 ~~~~~~~adv~v~ps~~e~~~~~--~~EAma~------G~Pvi~s~~~~~~e~~~~~~g~~~~~~d~~~la~~i~~ll 393 (439)
T 3fro_A 324 VRELYGSVDFVIIPSYFEPFGLV--ALEAMCL------GAIPIASAVGGLRDIITNETGILVKAGDPGELANAILKAL 393 (439)
T ss_dssp HHHHHTTCSEEEECBSCCSSCHH--HHHHHHT------TCEEEEESSTHHHHHCCTTTCEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHCCEEEeCCCCCCccHH--HHHHHHC------CCCeEEcCCCCcceeEEcCceEEeCCCCHHHHHHHHHHHH
Confidence 344668899887543 345543 6777765 899998 4555579999999998754
No 197
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=32.60 E-value=46 Score=25.37 Aligned_cols=27 Identities=15% Similarity=0.277 Sum_probs=12.6
Q ss_pred EEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 46 LVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 46 lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+|+||.+ |+=.++++...+.|-.|+++
T Consensus 25 lVtGatG-~iG~~l~~~L~~~G~~V~~~ 51 (236)
T 3e8x_A 25 LVVGANG-KVARYLLSELKNKGHEPVAM 51 (236)
T ss_dssp EEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCCC-hHHHHHHHHHHhCCCeEEEE
Confidence 4444444 44444444444444444444
No 198
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=32.57 E-value=1.3e+02 Score=23.31 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|++.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 3 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 3 KVAMVTGGAQ--------GIGRGISEKLAADGFDIAVADL 34 (258)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHHTCEEEEEEC
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566667664 2556666677777777665443
No 199
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=32.51 E-value=37 Score=28.46 Aligned_cols=52 Identities=31% Similarity=0.319 Sum_probs=34.1
Q ss_pred HHHHHHhCCEEEEec---C-ccccHHHHHHHHHHHHhCCCCCCEEE------------------EEEecCCHHHHHHHhh
Q 044681 101 KAEMARYADCFIVLP---G-GFGTLEKLFEVTTWSQLGVHNKPVAI------------------IMVSASNAKELVQKLE 158 (184)
Q Consensus 101 k~~m~~~sDa~IvlP---G-G~GTL~El~~~l~~~qlg~~~kPvvl------------------~i~~~~~~~e~~~~l~ 158 (184)
...+...||++++.+ + |.-+ +.|+++. ++|||. .++..+|++++.+.|.
T Consensus 271 l~~~y~~aDv~vl~ss~~e~gg~~---~lEAmA~------G~PVI~~~~~~~~~e~~~~~~~~G~l~~~~d~~~La~ai~ 341 (374)
T 2xci_A 271 LKELYPVGKIAIVGGTFVNIGGHN---LLEPTCW------GIPVIYGPYTHKVNDLKEFLEKEGAGFEVKNETELVTKLT 341 (374)
T ss_dssp HHHHGGGEEEEEECSSSSSSCCCC---CHHHHTT------TCCEEECSCCTTSHHHHHHHHHTTCEEECCSHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCcccCCCCcC---HHHHHHh------CCCEEECCCccChHHHHHHHHHCCCEEEeCCHHHHHHHHH
Confidence 345668899988743 2 2233 5566654 899985 3445578888888777
Q ss_pred hhc
Q 044681 159 DYE 161 (184)
Q Consensus 159 ~~~ 161 (184)
+..
T Consensus 342 ~ll 344 (374)
T 2xci_A 342 ELL 344 (374)
T ss_dssp HHH
T ss_pred HHH
Confidence 754
No 200
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=32.49 E-value=1.4e+02 Score=22.72 Aligned_cols=54 Identities=15% Similarity=0.075 Sum_probs=32.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE-cCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY-GGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~-GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|.|+++ -..+++++.|+++|+.++. .+....-.+...+...+.++.+.-+
T Consensus 8 k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (255)
T 3icc_A 8 KVALVTGASR--------GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62 (255)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEE
Confidence 5666667664 2667778888888888765 2333244444444444555555443
No 201
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=32.39 E-value=1.4e+02 Score=26.54 Aligned_cols=100 Identities=14% Similarity=0.059 Sum_probs=54.2
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhcC-CeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHhCCEEEEecCcccc
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRGR-RHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPGGFGT 120 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~G-G~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~GT 120 (184)
.|+.+|.||...|---.++++|+..| |.|.=+.|.........++ ++..... +.+..|++++=|| .|+
T Consensus 236 ~G~vlvigGs~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~p---e~m~~~~-------~~~~~~a~~iGPG-lG~ 304 (475)
T 3k5w_A 236 YGHAHVLLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKPL---ELVFCEN-------FPNLLSAFALGMG-LEN 304 (475)
T ss_dssp GCEEEEEECSSHHHHHHHHHHHHHTTCSEEEEEESSSCCSSSSSCT---TSEEESS-------CCSSCSEEEECTT-CSS
T ss_pred CCeEEEEeCCCCcHHHHHHHHHHHhCCCeEEEeccHHHhhcccCCh---hheeehh-------hccCCCEEEEcCC-CCC
Confidence 69999999874455555578888876 5665555654111000011 2222222 1267899988886 443
Q ss_pred HH-HHHHHHHHHHhCCCCCCEEE----------------EEEecCCHHHHHHHhhh
Q 044681 121 LE-KLFEVTTWSQLGVHNKPVAI----------------IMVSASNAKELVQKLED 159 (184)
Q Consensus 121 L~-El~~~l~~~qlg~~~kPvvl----------------~i~~~~~~~e~~~~l~~ 159 (184)
-+ ++.+++.. + |+|+ ..+.+.++.|+-..+..
T Consensus 305 ~~~~l~~~l~~------~-p~VlDADaL~~~~~~~~~~~~~VlTPh~~E~~rL~g~ 353 (475)
T 3k5w_A 305 IPKDFNRWLEL------A-PCVLDAGVFYHKEILQALEKEAVLTPHPKEFLSLLNL 353 (475)
T ss_dssp CCTTHHHHHHH------S-CEEEEGGGGGSGGGGTTTTSSEEEECCHHHHHHHHHH
T ss_pred CHHHHHHHHhc------C-CEEEECcccCCchhhhccCCCEEECCCHHHHHHHhCC
Confidence 11 23223321 3 7777 13456677777766653
No 202
>1epu_A S-SEC1; parallel beta-sheets, LEFT-hand turn connection, helical BUN endocytosis-exocytosis complex; 2.40A {Loligo pealei} SCOP: e.25.1.1 PDB: 1fvf_A 1fvh_A
Probab=32.21 E-value=76 Score=28.61 Aligned_cols=51 Identities=16% Similarity=0.149 Sum_probs=37.7
Q ss_pred CEEEEecCccccHHHHHHHHHHHHhCCCCCCEEEEEEecCCHHHHHHHhhhh
Q 044681 109 DCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAIIMVSASNAKELVQKLEDY 160 (184)
Q Consensus 109 Da~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl~i~~~~~~~e~~~~l~~~ 160 (184)
.++|++-|| +|.+|+..+..+.+-...++-|++.=...-++.+.++.+.+.
T Consensus 538 ~viVF~vGG-~Ty~E~~~l~~l~~~~~~~~~viigsT~i~n~~~fl~~l~~l 588 (591)
T 1epu_A 538 RLIIFVVGG-ISYSEMRSAYEVTQTAKNNWEVILGSTHILTPEGLLRDLRKI 588 (591)
T ss_dssp EEEEEEETC-BCHHHHHHHHHHHTSSCSSCEEEEEESSBCCHHHHHHHHHTT
T ss_pred eEEEEEECC-CCHHHHHHHHHHHhhccCCCeEEEecCCcCCHHHHHHHHHHh
Confidence 477777777 699999998888762223567777655567899999887754
No 203
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=32.08 E-value=45 Score=28.37 Aligned_cols=33 Identities=21% Similarity=0.213 Sum_probs=27.3
Q ss_pred hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 107 YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 107 ~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..|+|||+-| .=||+|-+.+|+++- . .+|||||
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVl 117 (332)
T 2wlt_A 85 RIQGVVITHG-TDTLEESAYFLNLVL-H-STKPVVL 117 (332)
T ss_dssp TCCEEEEECC-SSSHHHHHHHHHHHC-C-CSSCEEE
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh-C-CCCCEEE
Confidence 3689999974 789999999998753 3 6899999
No 204
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=32.07 E-value=26 Score=25.97 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=20.1
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD 45 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 45 (184)
..|++|.|+.+|..++. .+.|+.+++.|.+.|+.
T Consensus 7 ~~~~ki~I~Y~S~tGnT---~~~A~~ia~~l~~~g~~ 40 (167)
T 1ykg_A 7 AEMPGITIISASQTGNA---RRVAEALRDDLLAAKLN 40 (167)
T ss_dssp -----CEEEEECSSSHH---HHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEEECCchHH---HHHHHHHHHHHHHCCCc
Confidence 44666777777777632 35778888888776664
No 205
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=32.07 E-value=53 Score=27.13 Aligned_cols=29 Identities=17% Similarity=0.390 Sum_probs=21.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|+|.||. +..+++.+...+.|+.++.
T Consensus 1 MK~I~ilGgg---------~~g~~~~~~Ak~~G~~vv~ 29 (363)
T 4ffl_A 1 MKTICLVGGK---------LQGFEAAYLSKKAGMKVVL 29 (363)
T ss_dssp CCEEEEECCS---------HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC---------HHHHHHHHHHHHCCCEEEE
Confidence 7899999986 3456666666778988773
No 206
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=31.93 E-value=1.1e+02 Score=24.87 Aligned_cols=33 Identities=18% Similarity=0.272 Sum_probs=25.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|-|+++- ..+++.+.|+++|+.|+.-+..
T Consensus 9 k~vlVTGas~g--------IG~~la~~l~~~G~~Vv~~~r~ 41 (319)
T 3ioy_A 9 RTAFVTGGANG--------VGIGLVRQLLNQGCKVAIADIR 41 (319)
T ss_dssp CEEEEETTTST--------HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEcCCchH--------HHHHHHHHHHHCCCEEEEEECC
Confidence 57888888763 6778888899999998865554
No 207
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=31.87 E-value=76 Score=26.21 Aligned_cols=40 Identities=13% Similarity=0.126 Sum_probs=0.0
Q ss_pred CccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 1 MEEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 1 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
..........||+|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 19 ~~~~~~~~~~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 58 (379)
T 2c5a_A 19 LEREQYWPSENLKISITGAGG--------FIASHIARRLKHEGHYVIA 58 (379)
T ss_dssp CCCCCSCTTSCCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred HhccccccccCCeEEEECCcc--------HHHHHHHHHHHHCCCeEEE
No 208
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=31.51 E-value=63 Score=26.37 Aligned_cols=33 Identities=12% Similarity=0.132 Sum_probs=25.1
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++..|++|+|+|.. .....+++.|+++|+.|+.
T Consensus 17 ~~~~m~~I~iIG~G---------~mG~~~A~~l~~~G~~V~~ 49 (310)
T 3doj_A 17 RGSHMMEVGFLGLG---------IMGKAMSMNLLKNGFKVTV 49 (310)
T ss_dssp -CCCSCEEEEECCS---------HHHHHHHHHHHHTTCEEEE
T ss_pred ccccCCEEEEECcc---------HHHHHHHHHHHHCCCeEEE
Confidence 34567899999964 3667788888999997763
No 209
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=31.50 E-value=1.6e+02 Score=23.11 Aligned_cols=55 Identities=11% Similarity=0.022 Sum_probs=31.4
Q ss_pred ceEEEEcCCC-CCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCC-eEEEE
Q 044681 12 KRVCVFCGSS-PDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRR-HVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~-~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGv 73 (184)
|++.|-|+|+ .+ ..+.+++.|+++|..|+.-+-..---+.+.+-..+.++ .+..+
T Consensus 7 K~alVTGaa~~~G-------IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~ 63 (256)
T 4fs3_A 7 KTYVIMGIANKRS-------IAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63 (256)
T ss_dssp CEEEEECCCSTTC-------HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE
T ss_pred CEEEEECCCCCch-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE
Confidence 4666666543 23 56677778888898887655542333444444444443 44444
No 210
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=31.48 E-value=67 Score=23.75 Aligned_cols=33 Identities=15% Similarity=0.130 Sum_probs=20.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCeE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVS-KGLDL 46 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~-~G~~l 46 (184)
||+|.|+.+|..+ .-.+.|+.+.+.+.+ .|+.+
T Consensus 1 Mmkilii~~S~~g---~t~~la~~i~~~l~~~~g~~v 34 (198)
T 3b6i_A 1 MAKVLVLYYSMYG---HIETMARAVAEGASKVDGAEV 34 (198)
T ss_dssp -CEEEEEECCSSS---HHHHHHHHHHHHHHTSTTCEE
T ss_pred CCeEEEEEeCCCc---HHHHHHHHHHHHHhhcCCCEE
Confidence 3456665556543 334678888888877 67543
No 211
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=31.35 E-value=1.5e+02 Score=21.56 Aligned_cols=80 Identities=13% Similarity=0.052 Sum_probs=38.5
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhc-CCeEEEEecCccccccccCCCCceEeecCChHHHHHH----HHHhCCEEEEecC
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRG-RRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAE----MARYADCFIVLPG 116 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~-GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~----m~~~sDa~IvlPG 116 (184)
.+..+|+|.|..|. .+++...+. |-.|+.+-.+............ +.+. .+......+ -++.+|.+|+.-+
T Consensus 39 ~~~v~IiG~G~~G~--~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~-~~~~-gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILGMGRIGT--GAYDELRARYGKISLGIEIREEAAQQHRSEGR-NVIS-GDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEECCSHHHH--HHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC-CEEE-CCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEECCCHHHH--HHHHHHHhccCCeEEEEECCHHHHHHHHHCCC-CEEE-cCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 34788888765443 334555566 7788888543221111111111 1222 222111111 1356899999776
Q ss_pred ccccHHHHH
Q 044681 117 GFGTLEKLF 125 (184)
Q Consensus 117 G~GTL~El~ 125 (184)
..-+...+.
T Consensus 115 ~~~~~~~~~ 123 (183)
T 3c85_A 115 HHQGNQTAL 123 (183)
T ss_dssp SHHHHHHHH
T ss_pred ChHHHHHHH
Confidence 644444433
No 212
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=31.30 E-value=71 Score=23.22 Aligned_cols=31 Identities=13% Similarity=0.275 Sum_probs=24.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
|+|.|.|++. -..+.+.+.|.++|+.++.-.
T Consensus 4 ~~ilVtGatG--------~iG~~l~~~l~~~g~~V~~~~ 34 (206)
T 1hdo_A 4 KKIAIFGATG--------QTGLTTLAQAVQAGYEVTVLV 34 (206)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEEcCCc--------HHHHHHHHHHHHCCCeEEEEE
Confidence 5899999875 367788888888999887543
No 213
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=31.29 E-value=1.4e+02 Score=23.43 Aligned_cols=54 Identities=13% Similarity=0.106 Sum_probs=31.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 23 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 76 (277)
T 2rhc_B 23 EVALVTGATS--------GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGR 76 (277)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 5777777765 36677888888899988765443222222233333345555544
No 214
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=31.28 E-value=1.6e+02 Score=22.31 Aligned_cols=13 Identities=15% Similarity=0.087 Sum_probs=9.9
Q ss_pred hCCEEEEecCccc
Q 044681 107 YADCFIVLPGGFG 119 (184)
Q Consensus 107 ~sDa~IvlPGG~G 119 (184)
.-|.+|-..|..+
T Consensus 94 ~id~lv~nAg~~~ 106 (247)
T 3i1j_A 94 RLDGLLHNASIIG 106 (247)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 4699999988653
No 215
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=31.19 E-value=71 Score=25.55 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|+|.++++.. .-+...+..|++.|+++||.+.
T Consensus 7 mkIl~~~~~~----gG~~~~~~~la~~L~~~G~~V~ 38 (364)
T 1f0k_A 7 KRLMVMAGGT----GGHVFPGLAVAHHLMAQGWQVR 38 (364)
T ss_dssp CEEEEECCSS----HHHHHHHHHHHHHHHTTTCEEE
T ss_pred cEEEEEeCCC----ccchhHHHHHHHHHHHcCCEEE
Confidence 6898887432 2455678899999999998775
No 216
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=31.14 E-value=2.2e+02 Score=23.27 Aligned_cols=107 Identities=15% Similarity=0.175 Sum_probs=62.7
Q ss_pred HHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHHHHHHHhC--C
Q 044681 32 AIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRKAEMARYA--D 109 (184)
Q Consensus 32 A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~s--D 109 (184)
.+++-+...+.|..++..-.. .+.+ +-|.+.|-..|||.+..+.. .. .++ +.-..+.... +
T Consensus 151 l~~l~~~a~~lGl~~lvev~t---~ee~-~~A~~~Gad~IGv~~r~l~~----------~~--~dl-~~~~~l~~~v~~~ 213 (272)
T 3qja_A 151 LVSMLDRTESLGMTALVEVHT---EQEA-DRALKAGAKVIGVNARDLMT----------LD--VDR-DCFARIAPGLPSS 213 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESS---HHHH-HHHHHHTCSEEEEESBCTTT----------CC--BCT-THHHHHGGGSCTT
T ss_pred HHHHHHHHHHCCCcEEEEcCC---HHHH-HHHHHCCCCEEEECCCcccc----------cc--cCH-HHHHHHHHhCccc
Confidence 344444444568877655443 2333 34667889999997432111 00 111 1122333443 7
Q ss_pred EEEEecCccccHHHHHHHHHHHHhCCCCCCEEE--EEEecCCHHHHHHHhhhh
Q 044681 110 CFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI--IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 110 a~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl--~i~~~~~~~e~~~~l~~~ 160 (184)
..|+.-||+.|.+.+..+. +.|.. =+++ .++..+||.+.++.+.+.
T Consensus 214 ~pvVaegGI~t~edv~~l~---~~Gad--gvlVGsal~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 214 VIRIAESGVRGTADLLAYA---GAGAD--AVLVGEGLVTSGDPRAAVADLVTA 261 (272)
T ss_dssp SEEEEESCCCSHHHHHHHH---HTTCS--EEEECHHHHTCSCHHHHHHHHHTT
T ss_pred CEEEEECCCCCHHHHHHHH---HcCCC--EEEEcHHHhCCCCHHHHHHHHHhh
Confidence 8899999999999988765 44432 2333 345568999999888864
No 217
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=31.10 E-value=1.7e+02 Score=22.06 Aligned_cols=54 Identities=17% Similarity=0.113 Sum_probs=31.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG-GGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G-Gg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.++.- .....-.+...+...+.+..+.-+
T Consensus 6 ~~vlItGasg--------giG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 60 (247)
T 2hq1_A 6 KTAIVTGSSR--------GLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVA 60 (247)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEE
Confidence 5777877765 36677888888899988754 322233333333333345554443
No 218
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=31.04 E-value=1.9e+02 Score=22.66 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=24.0
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 17 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGASS-GIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 4567888887 888888888888888877663
No 219
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=30.94 E-value=74 Score=25.44 Aligned_cols=34 Identities=24% Similarity=0.258 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++...|+|.|.|++. -..+.+.+.|+++|+.|+.
T Consensus 1 ~M~~~~~vlVTGatG--------~iG~~l~~~L~~~G~~V~~ 34 (341)
T 3enk_A 1 SMSTKGTILVTGGAG--------YIGSHTAVELLAHGYDVVI 34 (341)
T ss_dssp -CCSSCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcEEEEecCCc--------HHHHHHHHHHHHCCCcEEE
No 220
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=30.92 E-value=85 Score=23.97 Aligned_cols=33 Identities=12% Similarity=0.169 Sum_probs=24.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 12 k~vlITGasg--------giG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGS--------GIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5788888775 36677888888899988765544
No 221
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=30.91 E-value=97 Score=21.20 Aligned_cols=30 Identities=17% Similarity=0.269 Sum_probs=21.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
-+.|.|||.+.. .+...++.|.+.||..++
T Consensus 56 ~~~ivv~C~~G~--------rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 56 NEIYYIVCAGGV--------RSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp TSEEEEECSSSS--------HHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEECCCCH--------HHHHHHHHHHHcCCCEEE
Confidence 358999997632 345566778899999885
No 222
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=30.90 E-value=1e+02 Score=23.93 Aligned_cols=32 Identities=16% Similarity=0.139 Sum_probs=20.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
+++.|.|+++ -..+++++.|+++|+.|+.-+.
T Consensus 6 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 37 (260)
T 2qq5_A 6 QVCVVTGASR--------GIGRGIALQLCKAGATVYITGR 37 (260)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2566677777888888775443
No 223
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=30.86 E-value=1.6e+02 Score=23.03 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=19.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 14 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 14 KVAFITGAAR--------GQGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCeEEEE
Confidence 5666667665 25566777777788877643
No 224
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=30.85 E-value=84 Score=27.94 Aligned_cols=34 Identities=21% Similarity=0.173 Sum_probs=27.8
Q ss_pred hCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 107 YADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 107 ~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
..|+||++-| .=||+|-+.+|+++ +...+|||||
T Consensus 168 ~~DG~VItHG-TDTMeeTA~~Lsl~-l~~~~KPVVl 201 (438)
T 1zq1_A 168 GDYGVVVAHG-TDTMGYTAAALSFM-LRNLGKPVVL 201 (438)
T ss_dssp TCSEEEEECC-SSSHHHHHHHHHHH-EESCCSCEEE
T ss_pred CCCeEEEecC-chhHHHHHHHHHHH-HhCCCCCEEE
Confidence 5799999974 78999999999885 3335799999
No 225
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=30.80 E-value=53 Score=21.65 Aligned_cols=26 Identities=12% Similarity=0.201 Sum_probs=19.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD 45 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~ 45 (184)
+.|.|||.+. ..+......|.+.||.
T Consensus 54 ~~ivvyC~~g--------~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 54 RPLLLVCEKG--------LLSQVAALYLEAEGYE 79 (94)
T ss_dssp SCEEEECSSS--------HHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCC--------ChHHHHHHHHHHcCCc
Confidence 6899999764 2456667778888987
No 226
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=30.71 E-value=2e+02 Score=22.82 Aligned_cols=29 Identities=17% Similarity=0.200 Sum_probs=16.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 49 ~vlVTGas~-GIG~aia~~la~~G~~V~~~ 77 (291)
T 3ijr_A 49 NVLITGGDS-GIGRAVSIAFAKEGANIAIA 77 (291)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 345566655 66556666655555555544
No 227
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=30.54 E-value=1.4e+02 Score=23.99 Aligned_cols=64 Identities=14% Similarity=0.174 Sum_probs=0.0
Q ss_pred ccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcC-CeEEEE
Q 044681 2 EEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGR-RHVLGI 73 (184)
Q Consensus 2 ~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~G-G~viGv 73 (184)
+.+.-.+-..|+|.|-|+++ -..+++++.|+++|+.|+.-+....--+.+.+...+.+ +.+..+
T Consensus 32 ~~~~m~~l~~k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 96 (293)
T 3rih_A 32 ERKVMFDLSARSVLVTGGTK--------GIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGV 96 (293)
T ss_dssp --CCTTCCTTCEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEE
T ss_pred ccccccCCCCCEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEE
No 228
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=30.45 E-value=1.5e+02 Score=22.43 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=23.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 12 ~~vlVtGasg--------giG~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 12 KCAIITGAGA--------GIGKEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp CEEEETTTTS--------HHHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEECCcc--------HHHHHHHHHHHHCCCEEEEEcCC
Confidence 5777777765 36677788888889887765443
No 229
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=30.32 E-value=1.1e+02 Score=23.27 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=0.0
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVS-KGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~-~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+...++|.|.|+++ -..+.+.+.|++ +|+.|+.-+...--.+...+...+.+.++.-+
T Consensus 1 ~~~~k~vlITGasg--------gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 59 (276)
T 1wma_A 1 SSGIHVALVTGGNK--------GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 59 (276)
T ss_dssp -CCCCEEEESSCSS--------HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCEEEEeCCCc--------HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEE
No 230
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=30.13 E-value=56 Score=24.53 Aligned_cols=29 Identities=3% Similarity=0.007 Sum_probs=20.5
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.+|+||.+ ++=.++++...+.|-.|+++.
T Consensus 3 ilItGatG-~iG~~l~~~L~~~g~~V~~~~ 31 (219)
T 3dqp_A 3 IFIVGSTG-RVGKSLLKSLSTTDYQIYAGA 31 (219)
T ss_dssp EEEESTTS-HHHHHHHHHHTTSSCEEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 46777776 666777777777777777764
No 231
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=30.09 E-value=55 Score=25.79 Aligned_cols=30 Identities=7% Similarity=0.058 Sum_probs=19.2
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
+++|.|+|++.. ..+.+.+.|.++|+.++.
T Consensus 4 ~~~ilVtGatG~--------iG~~l~~~L~~~g~~V~~ 33 (308)
T 1qyc_A 4 RSRILLIGATGY--------IGRHVAKASLDLGHPTFL 33 (308)
T ss_dssp CCCEEEESTTST--------THHHHHHHHHHTTCCEEE
T ss_pred CCEEEEEcCCcH--------HHHHHHHHHHhCCCCEEE
Confidence 567889887653 344555666666766554
No 232
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=30.09 E-value=73 Score=25.93 Aligned_cols=37 Identities=14% Similarity=0.043 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 044681 11 FKRVCVFCGSSPD-YKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 11 ~~~I~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
.|+|++++..-.+ ...-....+.+|++.|+++||.+.
T Consensus 2 ~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~ 39 (439)
T 3fro_A 2 HMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVL 39 (439)
T ss_dssp CCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred ceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEE
Confidence 3678888866433 111233568899999999988765
No 233
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.93 E-value=75 Score=24.74 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=24.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
.|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 19 ~k~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 19 DKGVLVLAASR--------GIGRAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp TCEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEcCC
Confidence 46777888765 25667777788888887765544
No 234
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=29.93 E-value=20 Score=27.87 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=6.5
Q ss_pred hHHHHHHHHhcCCeEE
Q 044681 56 MGLISEEVHRGRRHVL 71 (184)
Q Consensus 56 M~a~a~ga~~~GG~vi 71 (184)
+..+.+-..+.|..++
T Consensus 124 ~~~l~~~L~~~Ga~~v 139 (191)
T 1bvy_F 124 PAFIDETLAAKGAENI 139 (191)
T ss_dssp HHHHHHHHHTTTCCCC
T ss_pred HHHHHHHHHHCCCeEe
Confidence 3333333334444443
No 235
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.92 E-value=47 Score=26.95 Aligned_cols=50 Identities=18% Similarity=0.205 Sum_probs=32.2
Q ss_pred HHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE-------EE--EecCCHHHHHHHhhh
Q 044681 104 MARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI-------IM--VSASNAKELVQKLED 159 (184)
Q Consensus 104 m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl-------~i--~~~~~~~e~~~~l~~ 159 (184)
+.+..|.+|+ -||=||+.|.+..+.- .+.|++- ++ +..++++++++.|.+
T Consensus 60 ~~~~~D~vi~-~GGDGT~l~a~~~~~~-----~~~P~lGI~~Gt~gfla~~~~~~~~~al~~i~~ 118 (292)
T 2an1_A 60 IGQQADLAVV-VGGDGNMLGAARTLAR-----YDINVIGINRGNLGFLTDLDPDNALQQLSDVLE 118 (292)
T ss_dssp HHHHCSEEEE-CSCHHHHHHHHHHHTT-----SSCEEEEBCSSSCCSSCCBCTTSHHHHHHHHHT
T ss_pred cccCCCEEEE-EcCcHHHHHHHHHhhc-----CCCCEEEEECCCcccCCcCCHHHHHHHHHHHHc
Confidence 4466887766 5889999998876632 2456543 11 124667777777764
No 236
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=29.84 E-value=1.4e+02 Score=24.45 Aligned_cols=57 Identities=9% Similarity=-0.013 Sum_probs=38.6
Q ss_pred CCCCCCChHHHHHHHHHHHHHHH----CCCeEEEcCCCcchhHHHHHHHHhcC--CeEEEEecC
Q 044681 19 GSSPDYKYCYRKAAIDLGNELVS----KGLDLVYGGGNVGLMGLISEEVHRGR--RHVLGIIPR 76 (184)
Q Consensus 19 gs~~~~~~~~~~~A~~lG~~LA~----~G~~lV~GGg~~GlM~a~a~ga~~~G--G~viGviP~ 76 (184)
++++..-.-|...+.|+-+.+.+ -.+.++.-|+. |..-.++++.++.| .+++||-|.
T Consensus 163 ~~n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~G-Gt~~Gi~~~~k~~g~~~~vigve~~ 225 (338)
T 1tzj_A 163 SDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTG-STQAGMVVGFAADGRADRVIGVDAS 225 (338)
T ss_dssp TSSTTTTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSS-HHHHHHHHHHHTTTCGGGEEEEECS
T ss_pred CCCcccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCc-HHHHHHHHHHHhhCCCCeEEEEEcc
Confidence 44544445577778888887763 35555555555 88888899888642 189999764
No 237
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=29.80 E-value=54 Score=25.01 Aligned_cols=30 Identities=13% Similarity=0.091 Sum_probs=26.4
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 3 ~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 32 (230)
T 3guy_A 3 LIVITGASS-GLGAELAKLYDAEGKATYLTG 32 (230)
T ss_dssp CEEEESTTS-HHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecCCc-hHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 999999999999999888774
No 238
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=29.76 E-value=69 Score=24.74 Aligned_cols=33 Identities=21% Similarity=0.179 Sum_probs=21.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 4 k~vlVTGas~--------GIG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 4 GHIIVTGAGS--------GLGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECC
Confidence 4666667664 25566677777777777655444
No 239
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=29.76 E-value=82 Score=22.57 Aligned_cols=31 Identities=35% Similarity=0.438 Sum_probs=21.7
Q ss_pred HhCCEEEEecCcccc-----HHHHHHHHHHHHhCCCCCCEEE
Q 044681 106 RYADCFIVLPGGFGT-----LEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 106 ~~sDa~IvlPGG~GT-----L~El~~~l~~~qlg~~~kPvvl 142 (184)
+.||++|+|.|-.-+ -.||-.++ ..+||++.
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIig 72 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIIT 72 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEE
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEE
Confidence 668999999987764 34444433 25899886
No 240
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=29.72 E-value=35 Score=29.07 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=27.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++|+|++|....+.+.=...|+.+.+.|-+.||.++
T Consensus 5 ~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~ 40 (372)
T 3tqt_A 5 LHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLIS 40 (372)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEE
Confidence 466666665656567777899999999988899876
No 241
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=29.65 E-value=1.2e+02 Score=23.37 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.++.-+. ..--.+.+.+...+.++.+..+
T Consensus 5 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 59 (246)
T 2uvd_A 5 KVALVTGASR--------GIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAV 59 (246)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
No 242
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=29.55 E-value=32 Score=28.94 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=26.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++|+|++|....+.+.=...|+.+.+.|-+.||.++
T Consensus 4 ~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~ 39 (364)
T 3i12_A 4 LRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVV 39 (364)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred cEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEE
Confidence 456666655555566667899999999988999876
No 243
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=29.44 E-value=79 Score=23.98 Aligned_cols=34 Identities=35% Similarity=0.165 Sum_probs=26.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
-|+|.|.|++. -..+.+.+.|+++|+.|+.-...
T Consensus 21 ~~~ilVtGatG--------~iG~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 21 GMRVLVVGANG--------KVARYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECCCC--------hHHHHHHHHHHhCCCeEEEEECC
Confidence 46899999876 36778888889999988755544
No 244
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=29.24 E-value=2.7e+02 Score=24.48 Aligned_cols=91 Identities=14% Similarity=0.019 Sum_probs=49.0
Q ss_pred HHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeec--CChHHHHHHHHHhCCEE
Q 044681 34 DLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPV--DHMHQRKAEMARYADCF 111 (184)
Q Consensus 34 ~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~--~~~~~Rk~~m~~~sDa~ 111 (184)
.++..... ++.+|+|+|..| ..+++.-.+.|-.++-|=.+... -+.+...+.. .+...=+..=++.+|++
T Consensus 341 ~~~~~~~~-~~viIiG~G~~G--~~la~~L~~~g~~v~vid~d~~~-----~~~~~~~i~gD~t~~~~L~~agi~~ad~v 412 (565)
T 4gx0_A 341 LIGEAPED-ELIFIIGHGRIG--CAAAAFLDRKPVPFILIDRQESP-----VCNDHVVVYGDATVGQTLRQAGIDRASGI 412 (565)
T ss_dssp ------CC-CCEEEECCSHHH--HHHHHHHHHTTCCEEEEESSCCS-----SCCSSCEEESCSSSSTHHHHHTTTSCSEE
T ss_pred HhcCCCCC-CCEEEECCCHHH--HHHHHHHHHCCCCEEEEECChHH-----HhhcCCEEEeCCCCHHHHHhcCccccCEE
Confidence 34433333 899999999855 56677777788888877432211 1112223332 22222233446789999
Q ss_pred EEecCccccHHHHHHHHHHHHhC
Q 044681 112 IVLPGGFGTLEKLFEVTTWSQLG 134 (184)
Q Consensus 112 IvlPGG~GTL~El~~~l~~~qlg 134 (184)
|+.-+-- -.-+.-.+...+++
T Consensus 413 i~~~~~d--~~ni~~~~~ak~l~ 433 (565)
T 4gx0_A 413 IVTTNDD--STNIFLTLACRHLH 433 (565)
T ss_dssp EECCSCH--HHHHHHHHHHHHHC
T ss_pred EEECCCc--hHHHHHHHHHHHHC
Confidence 9999873 22233334444555
No 245
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=29.22 E-value=61 Score=22.89 Aligned_cols=31 Identities=19% Similarity=0.349 Sum_probs=19.5
Q ss_pred eEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 044681 13 RVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL 46 (184)
Q Consensus 13 ~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 46 (184)
+|.|+.+|..++ -.+.|+.+.+.+.+.|+.+
T Consensus 2 ki~iiy~S~~Gn---t~~~a~~i~~~l~~~g~~v 32 (147)
T 1f4p_A 2 KALIVYGSTTGN---TEYTAETIARELADAGYEV 32 (147)
T ss_dssp EEEEEEECSSSH---HHHHHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCcCH---HHHHHHHHHHHHHhcCCee
Confidence 444444555553 3467788888887777765
No 246
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=29.21 E-value=1.6e+02 Score=22.80 Aligned_cols=32 Identities=19% Similarity=0.131 Sum_probs=20.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+-
T Consensus 14 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 45 (267)
T 1iy8_A 14 RVVLITGGGS--------GLGRATAVRLAAEGAKLSLVDV 45 (267)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 5666777664 2566677777777877765443
No 247
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=29.18 E-value=1.9e+02 Score=22.14 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=17.9
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 5 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (247)
T 3dii_A 5 VIVTGGGH-GIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 46666666 66666666666666666554
No 248
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=29.16 E-value=99 Score=22.85 Aligned_cols=32 Identities=6% Similarity=-0.126 Sum_probs=23.2
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEec
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIP 75 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP 75 (184)
...+|+||+. |+=.++++-+...|.+|+++-.
T Consensus 40 ~~vlV~Ga~g-giG~~~~~~~~~~G~~V~~~~~ 71 (198)
T 1pqw_A 40 ERVLIHSATG-GVGMAAVSIAKMIGARIYTTAG 71 (198)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEeeCCC-hHHHHHHHHHHHcCCEEEEEeC
Confidence 3467888755 6556677778888889988754
No 249
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=29.16 E-value=85 Score=24.87 Aligned_cols=20 Identities=15% Similarity=0.172 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHCCCeEEEcC
Q 044681 31 AAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GG 50 (184)
..+++++.|+++|+.|+.-+
T Consensus 40 IG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 40 IGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44555555666666655433
No 250
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=29.13 E-value=68 Score=26.62 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=13.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|++|.|+|+. +.++++.+.+.+.|+.++
T Consensus 1 M~~Ililg~g---------~~g~~~~~a~~~~G~~v~ 28 (380)
T 3ax6_A 1 MKKIGIIGGG---------QLGKMMTLEAKKMGFYVI 28 (380)
T ss_dssp CCEEEEECCS---------HHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCC---------HHHHHHHHHHHHCCCEEE
Confidence 3456666653 134444444444555443
No 251
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.09 E-value=1.7e+02 Score=22.86 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=23.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 22 k~~lVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 22 RVALVTGGSR--------GLGFGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677777765 35677777888888887754443
No 252
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=29.06 E-value=58 Score=25.21 Aligned_cols=30 Identities=20% Similarity=0.165 Sum_probs=26.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 5 ~vlVTGas~-GIG~a~a~~l~~~G~~V~~~~ 34 (235)
T 3l6e_A 5 HIIVTGAGS-GLGRALTIGLVERGHQVSMMG 34 (235)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 468999998 999999999999999888763
No 253
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=29.00 E-value=52 Score=26.64 Aligned_cols=30 Identities=20% Similarity=0.351 Sum_probs=26.1
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||+. |+=.+.++...+.|.+|+-+
T Consensus 8 KvalVTGas~-GIG~aiA~~la~~Ga~Vv~~ 37 (254)
T 4fn4_A 8 KVVIVTGAGS-GIGRAIAKKFALNDSIVVAV 37 (254)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHcCCEEEEE
Confidence 3568999998 99999999999999988766
No 254
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=28.94 E-value=1.4e+02 Score=23.91 Aligned_cols=54 Identities=15% Similarity=0.100 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.|+.+..+
T Consensus 35 k~vlVTGas~--------gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 88 (291)
T 3cxt_A 35 KIALVTGASY--------GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGY 88 (291)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
No 255
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=28.93 E-value=1.3e+02 Score=23.29 Aligned_cols=33 Identities=15% Similarity=0.247 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 15 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 15 KVALVTASTD--------GIGLAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4566666654 25566777777788777654433
No 256
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=28.69 E-value=59 Score=24.69 Aligned_cols=33 Identities=15% Similarity=0.012 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+....++|.|.|+++ -..+++.+.|+++|+.|+
T Consensus 1 M~~~~k~vlVtGasg--------giG~~~a~~l~~~G~~V~ 33 (234)
T 2ehd_A 1 MEGMKGAVLITGASR--------GIGEATARLLHAKGYRVG 33 (234)
T ss_dssp ---CCCEEEESSTTS--------HHHHHHHHHHHHTTCEEE
T ss_pred CCCCCCEEEEECCCc--------HHHHHHHHHHHHCCCEEE
No 257
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=28.62 E-value=76 Score=25.55 Aligned_cols=31 Identities=16% Similarity=0.215 Sum_probs=0.0
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
.+|+|.|.|++. -..+.|.+.|+++|+.|+.
T Consensus 20 ~~~~vlVTGatG--------~iG~~l~~~L~~~g~~V~~ 50 (333)
T 2q1w_A 20 HMKKVFITGICG--------QIGSHIAELLLERGDKVVG 50 (333)
T ss_dssp -CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCCEEEEeCCcc--------HHHHHHHHHHHHCCCEEEE
No 258
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.61 E-value=1.9e+02 Score=22.91 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcc-------hhHHHHHHHHhcCCeEEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVG-------LMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~G-------lM~a~a~ga~~~GG~viGv 73 (184)
++-.-+++.|-|+++ -..+++++.|+++|+.|+.-+...- -.+.+.+...+.++.+..+
T Consensus 5 m~l~~k~vlVTGas~--------GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (285)
T 3sc4_A 5 MSLRGKTMFISGGSR--------GIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70 (285)
T ss_dssp -CCTTCEEEEESCSS--------HHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEE
T ss_pred cCCCCCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEE
No 259
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=28.61 E-value=29 Score=25.64 Aligned_cols=39 Identities=21% Similarity=0.334 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHC----CCeEEE---cCCC-cchhHHHHHHHHhcC
Q 044681 29 RKAAIDLGNELVSK----GLDLVY---GGGN-VGLMGLISEEVHRGR 67 (184)
Q Consensus 29 ~~~A~~lG~~LA~~----G~~lV~---GGg~-~GlM~a~a~ga~~~G 67 (184)
.++|+.+|++||++ |+.=|. ||.. -|-+.|+++||.++|
T Consensus 71 ~~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhgrV~ala~~are~G 117 (120)
T 1ovy_A 71 IEAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGRVKALADAAREAG 117 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCCCSTTCSSCSSTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHHHhC
Confidence 57889999998884 554332 4432 478999999999876
No 260
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=28.52 E-value=59 Score=25.33 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=36.6
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCc---------------chhHHHHHHHHhcCCeEEEEe
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNV---------------GLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~---------------GlM~a~a~ga~~~GG~viGvi 74 (184)
.|+|.|.|+++ -..+++++.|+++|+.|+.-+-.. .-...+.+.+.+..|.+=.++
T Consensus 22 ~k~vlITGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li 92 (251)
T 3orf_A 22 SKNILVLGGSG--------ALGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFV 92 (251)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 36788888775 367888899999999987654331 123444555555566665665
No 261
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=28.32 E-value=1.9e+02 Score=22.18 Aligned_cols=52 Identities=17% Similarity=0.155 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+...- +...+...+.+..+..+
T Consensus 5 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~ 56 (255)
T 2q2v_A 5 KTALVTGSTS--------GIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHH 56 (255)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEE
No 262
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=28.27 E-value=48 Score=24.71 Aligned_cols=36 Identities=25% Similarity=0.260 Sum_probs=17.6
Q ss_pred ceEEEEcCCCCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPD-YKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++++|||..... ..+.|....+.+-+.|.+.|..++
T Consensus 89 k~~a~fg~g~~~~y~~~~~~a~~~l~~~l~~~G~~~~ 125 (179)
T 1yob_A 89 KTVALFGLGDQVGYPENYLDALGELYSFFKDRGAKIV 125 (179)
T ss_dssp CEEEEEEECCTTTCTTTTTHHHHHHHHHHHTTTCEEE
T ss_pred CEEEEEEECCCcchhHHHHHHHHHHHHHHHHCCCEEE
Confidence 456666654322 112234455555555555555554
No 263
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=28.22 E-value=40 Score=24.55 Aligned_cols=34 Identities=29% Similarity=0.214 Sum_probs=24.6
Q ss_pred HHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCC
Q 044681 35 LGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRR 68 (184)
Q Consensus 35 lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG 68 (184)
|-+.+.......+|=+||.++|.++.+.+.+.|=
T Consensus 99 l~~~~~~~~~~~vy~CGP~~Mm~av~~~l~~~~~ 132 (142)
T 3lyu_A 99 VRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGV 132 (142)
T ss_dssp HHHHHHSSCCSEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHhcccCCCCEEEEECCHHHHHHHHHHHHHcCC
Confidence 4444555566677777788999999998888653
No 264
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=28.16 E-value=1.8e+02 Score=23.24 Aligned_cols=29 Identities=14% Similarity=0.148 Sum_probs=17.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
|++.|-|+++ -..+++++.|+++|+.|+.
T Consensus 29 k~~lVTGas~--------GIG~aia~~la~~G~~V~~ 57 (299)
T 3t7c_A 29 KVAFITGAAR--------GQGRSHAITLAREGADIIA 57 (299)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEE
Confidence 4555666554 2455666666777777664
No 265
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=28.11 E-value=54 Score=25.40 Aligned_cols=40 Identities=10% Similarity=0.026 Sum_probs=0.0
Q ss_pred CccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCC---CeEEE
Q 044681 1 MEEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKG---LDLVY 48 (184)
Q Consensus 1 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G---~~lV~ 48 (184)
+.++...+-.+++|.|.|+++ -..+++.+.|+++| +.|+.
T Consensus 11 ~~~~~~~~~~~k~vlITGasg--------gIG~~la~~L~~~G~~~~~V~~ 53 (267)
T 1sny_A 11 SSGLVPRGSHMNSILITGCNR--------GLGLGLVKALLNLPQPPQHLFT 53 (267)
T ss_dssp ---------CCSEEEESCCSS--------HHHHHHHHHHHTSSSCCSEEEE
T ss_pred cccccccCCCCCEEEEECCCC--------cHHHHHHHHHHhcCCCCcEEEE
No 266
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=28.05 E-value=2.1e+02 Score=22.13 Aligned_cols=72 Identities=11% Similarity=0.014 Sum_probs=37.3
Q ss_pred eEEEcCCCcchhHHHHHHHHhc-CCeEEEEecCccccccccCCCCceEeecCChHHH--HHHHHHhCCEEEEecCccc
Q 044681 45 DLVYGGGNVGLMGLISEEVHRG-RRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQR--KAEMARYADCFIVLPGGFG 119 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~-GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~R--k~~m~~~sDa~IvlPGG~G 119 (184)
.||+||.+ ++=.++++...+. |..|+.+.-+.....+.....+ +.+ ..|+... -.-.++..|++|-+.|-..
T Consensus 3 ilVtGatG-~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v-~~~-~~D~~d~~~l~~~~~~~d~vi~~a~~~~ 77 (289)
T 3e48_A 3 IMLTGATG-HLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKV-SVR-QLDYFNQESMVEAFKGMDTVVFIPSIIH 77 (289)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTB-EEE-ECCTTCHHHHHHHTTTCSEEEECCCCCC
T ss_pred EEEEcCCc-hHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCC-EEE-EcCCCCHHHHHHHHhCCCEEEEeCCCCc
Confidence 47788865 6666677776665 6677777422111111111111 222 2333222 2234467899998887543
No 267
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=27.96 E-value=65 Score=25.86 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=20.8
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHC--CCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSK--GLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~--G~~lV~ 48 (184)
||+|.|.|++. -..+.+.+.|.++ |+.|+.
T Consensus 4 m~~vlVTGatG--------~iG~~l~~~L~~~~~g~~V~~ 35 (348)
T 1oc2_A 4 FKNIIVTGGAG--------FIGSNFVHYVYNNHPDVHVTV 35 (348)
T ss_dssp CSEEEEETTTS--------HHHHHHHHHHHHHCTTCEEEE
T ss_pred CcEEEEeCCcc--------HHHHHHHHHHHHhCCCCEEEE
Confidence 67888888775 2566667767776 676653
No 268
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=27.95 E-value=91 Score=24.95 Aligned_cols=37 Identities=14% Similarity=0.158 Sum_probs=26.1
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
.+.++.|+|+ + +.+...- -.|..|+..||++|..++.
T Consensus 38 ~~~~~vI~v~-~-KGGvGKT--T~a~nLA~~La~~G~~Vll 74 (307)
T 3end_A 38 ITGAKVFAVY-G-KGGIGKS--TTSSNLSAAFSILGKRVLQ 74 (307)
T ss_dssp --CCEEEEEE-C-STTSSHH--HHHHHHHHHHHHTTCCEEE
T ss_pred cCCceEEEEE-C-CCCccHH--HHHHHHHHHHHHCCCeEEE
Confidence 3567889998 4 5454444 4788899999999987763
No 269
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=27.88 E-value=1.6e+02 Score=22.70 Aligned_cols=33 Identities=15% Similarity=0.222 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITGSSS--------GIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCC
Confidence 5778888775 36677888888899988765543
No 270
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=27.86 E-value=1e+02 Score=25.43 Aligned_cols=83 Identities=13% Similarity=0.048 Sum_probs=44.0
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEeecC--C-hHHHHHHHH---HhCCEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRR-HVLGIIPRALMKKELTG-VTLGEVKPVD--H-MHQRKAEMA---RYADCFIVL 114 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGviP~~~~~~e~~~-~~~~~~~~~~--~-~~~Rk~~m~---~~sDa~Ivl 114 (184)
...+|+|+|+.|++- .+-|+..|. +|+++-.+.. ..+... -..+..+... + -...+.+.. ...|.+|-.
T Consensus 173 ~~VlV~GaG~vG~~a--iqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 173 HKVLVCGAGPIGMVT--LLVAKAMGAAQVVVTDLSAT-RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CEEEEECCSHHHHHH--HHHHHHTTCSEEEEEESCHH-HHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CEEEEECCCHHHHHH--HHHHHHcCCCEEEEECCCHH-HHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 457789987666653 455666776 8888854321 111111 1112233222 1 111122221 247999988
Q ss_pred cCccccHHHHHHHH
Q 044681 115 PGGFGTLEKLFEVT 128 (184)
Q Consensus 115 PGG~GTL~El~~~l 128 (184)
.|+.-++++.+..+
T Consensus 250 ~g~~~~~~~~~~~l 263 (356)
T 1pl8_A 250 TGAEASIQAGIYAT 263 (356)
T ss_dssp SCCHHHHHHHHHHS
T ss_pred CCChHHHHHHHHHh
Confidence 88876777766654
No 271
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=27.75 E-value=62 Score=25.33 Aligned_cols=31 Identities=16% Similarity=0.073 Sum_probs=26.8
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 8 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~ 38 (252)
T 3h7a_A 8 ATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGR 38 (252)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999999888774
No 272
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.75 E-value=58 Score=25.74 Aligned_cols=30 Identities=7% Similarity=0.106 Sum_probs=18.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 12 k~~lVTGas~--------GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAAR--------GQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc--------HHHHHHHHHHHHcCCEEEEE
Confidence 4566666654 25566666677777777653
No 273
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=27.72 E-value=59 Score=25.25 Aligned_cols=28 Identities=21% Similarity=0.222 Sum_probs=15.9
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||.. |+=.++++...+.|-+|+.+
T Consensus 10 vlVTGas~-giG~~ia~~l~~~G~~V~~~ 37 (250)
T 2fwm_X 10 VWVTGAGK-GIGYATALAFVEAGAKVTGF 37 (250)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 45566655 55556666555555555544
No 274
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=27.60 E-value=62 Score=25.46 Aligned_cols=30 Identities=7% Similarity=0.191 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||.. |+=.++++...+.|-+|+.+
T Consensus 14 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 14 KVAFITGAAR-GQGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCeEEEE
Confidence 3578999998 99999999999999998877
No 275
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=27.56 E-value=36 Score=29.11 Aligned_cols=36 Identities=17% Similarity=0.164 Sum_probs=26.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++|+|++|....+.+.=...|+.+.+.|-+.||.++
T Consensus 23 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~ 58 (386)
T 3e5n_A 23 IRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPV 58 (386)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred ceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEE
Confidence 466666555555566667899999999988999876
No 276
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=27.55 E-value=60 Score=24.97 Aligned_cols=29 Identities=14% Similarity=0.267 Sum_probs=25.4
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.|||||.. |+=.++++...+.|-+|+.+-
T Consensus 4 vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 32 (257)
T 1fjh_A 4 IVISGCAT-GIGAATRKVLEAAGHQIVGID 32 (257)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 68999998 999999999999998888763
No 277
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=27.49 E-value=1.2e+02 Score=25.73 Aligned_cols=50 Identities=12% Similarity=-0.065 Sum_probs=31.1
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCCh
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHM 97 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~ 97 (184)
..+.||| .|+| ++++|++.|=+|+-+-++...+.-......++.++.+++
T Consensus 21 I~ilGs~-l~~~--l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d~~ 70 (361)
T 2r7k_A 21 IATLGSH-TSLH--ILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDNF 70 (361)
T ss_dssp EEEESST-THHH--HHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSSG
T ss_pred EEEECcH-HHHH--HHHHHHHCCCEEEEEECCCCCCcccccccCceEEECCCc
Confidence 3456777 4888 889999999999988765322211122333455656655
No 278
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=27.47 E-value=26 Score=31.91 Aligned_cols=43 Identities=30% Similarity=0.389 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCC----------cchhHHHHHHHHhcCCeEEE
Q 044681 30 KAAIDLGNELVSKGLDLVYGGGN----------VGLMGLISEEVHRGRRHVLG 72 (184)
Q Consensus 30 ~~A~~lG~~LA~~G~~lV~GGg~----------~GlM~a~a~ga~~~GG~viG 72 (184)
+-|+.|++.|.++|+.||+||=. .|+-+..+..+++.-|.++-
T Consensus 342 ~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvN 394 (490)
T 3ou5_A 342 KNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITAN 394 (490)
T ss_dssp HHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEEC
Confidence 34677888889999999998843 36677777777776664443
No 279
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=27.46 E-value=36 Score=25.25 Aligned_cols=19 Identities=11% Similarity=0.156 Sum_probs=9.2
Q ss_pred hhHHHHHHHHhcCCeEEEE
Q 044681 55 LMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 55 lM~a~a~ga~~~GG~viGv 73 (184)
.+..+.+-..+.|..+++-
T Consensus 105 a~~~l~~~l~~~G~~~~~~ 123 (173)
T 2fcr_A 105 AIEEIHDCFAKQGAKPVGF 123 (173)
T ss_dssp HHHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHCCCEEEee
Confidence 3344444444456655553
No 280
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=27.37 E-value=2e+02 Score=21.69 Aligned_cols=59 Identities=10% Similarity=0.028 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC-cchhHHHHHHHHhcCCeEEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN-VGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~-~GlM~a~a~ga~~~GG~viGv 73 (184)
++-..++|.|.|+++ -..+.+.+.|+++|+.|+.-+.. ..-.+.+.+...+.+..+.-+
T Consensus 3 ~~l~~k~vlVTGasg--------giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 62 (258)
T 3afn_B 3 PDLKGKRVLITGSSQ--------GIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFF 62 (258)
T ss_dssp GGGTTCEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEE
T ss_pred cCCCCCEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEE
No 281
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=27.32 E-value=81 Score=24.73 Aligned_cols=31 Identities=19% Similarity=0.231 Sum_probs=22.8
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
.+++|.|.|++. -....|.+.|.++|+.|+.
T Consensus 6 ~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 36 (321)
T 3vps_A 6 LKHRILITGGAG--------FIGGHLARALVASGEEVTV 36 (321)
T ss_dssp -CCEEEEETTTS--------HHHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCC--------hHHHHHHHHHHHCCCEEEE
Confidence 357899999875 3567777888888887664
No 282
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.23 E-value=66 Score=25.38 Aligned_cols=30 Identities=20% Similarity=0.138 Sum_probs=18.7
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
+++|.|.|++.. ..+.+.+.|.++|+.++.
T Consensus 4 ~~~ilVtGatG~--------iG~~l~~~L~~~g~~V~~ 33 (313)
T 1qyd_A 4 KSRVLIVGGTGY--------IGKRIVNASISLGHPTYV 33 (313)
T ss_dssp CCCEEEESTTST--------THHHHHHHHHHTTCCEEE
T ss_pred CCEEEEEcCCcH--------HHHHHHHHHHhCCCcEEE
Confidence 467888887653 344555556666666654
No 283
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=27.22 E-value=1.2e+02 Score=20.55 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=22.2
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe--EEEcCCC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLD--LVYGGGN 52 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~--lV~GGg~ 52 (184)
-+.|.|||.+. ..+...+..|.+.||. ++-||-.
T Consensus 56 ~~~ivvyC~~G--------~rs~~aa~~L~~~G~~~~~l~GG~~ 91 (110)
T 2k0z_A 56 DKKVLLHCRAG--------RRALDAAKSMHELGYTPYYLEGNVY 91 (110)
T ss_dssp SSCEEEECSSS--------HHHHHHHHHHHHTTCCCEEEESCGG
T ss_pred CCEEEEEeCCC--------chHHHHHHHHHHCCCCEEEecCCHH
Confidence 35788999653 2456667777787774 5556654
No 284
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=27.20 E-value=38 Score=27.97 Aligned_cols=37 Identities=16% Similarity=0.346 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++|+|++|....+.+.=...++.+.+.|.+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (343)
T 1e4e_A 4 IKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLY 40 (343)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEE
Confidence 4666666655443344355788889999889988763
No 285
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=27.16 E-value=64 Score=25.35 Aligned_cols=30 Identities=17% Similarity=0.178 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||+. |+=.++++...+.|-+|+.+
T Consensus 11 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 11 KVVLVTGGAR-GQGRSHAVKLAEEGADIILF 40 (287)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-hHHHHHHHHHHHCCCeEEEE
Confidence 3578999998 99999999999999998876
No 286
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=27.16 E-value=73 Score=27.62 Aligned_cols=95 Identities=16% Similarity=0.030 Sum_probs=50.9
Q ss_pred HHHHHHH---CCCeEEEcCCCcch-----hHHHHHHHHhcCCeEEEEecCccccccccCCCC-----ceEeecCChHHHH
Q 044681 35 LGNELVS---KGLDLVYGGGNVGL-----MGLISEEVHRGRRHVLGIIPRALMKKELTGVTL-----GEVKPVDHMHQRK 101 (184)
Q Consensus 35 lG~~LA~---~G~~lV~GGg~~Gl-----M~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~-----~~~~~~~~~~~Rk 101 (184)
+-++|.+ +...+|++|+. |. +..++++..+.+-+++-++...... ..+ +.+ ....+.+.... .
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~-~l~-~~~~~~~~~~~~v~~w~pq-~ 336 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTV-TTPPPAEVVALSEALEASRVPFIWSLRDKARV-HLP-EGFLEKTRGYGMVVPWAPQ-A 336 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSS-CCCCHHHHHHHHHHHHHHTCCEEEECCGGGGG-GSC-TTHHHHHTTTEEEESCCCH-H
T ss_pred HHHHHhcCCCcceEEEecCcc-ccCCHHHHHHHHHHHHhcCCeEEEEECCcchh-hCC-HHHHhhcCCceEEecCCCH-H
Confidence 4456653 45667777775 42 5566666666677777765322110 111 111 12334444443 2
Q ss_pred HHHHHhCCEEEEecCccccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 102 AEMARYADCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 102 ~~m~~~sDa~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
.+|...+=.+++--||+||..|... +++|+++
T Consensus 337 ~vL~h~~~~~fvth~G~~S~~Eal~---------~GvP~i~ 368 (456)
T 2c1x_A 337 EVLAHEAVGAFVTHCGWNSLWESVA---------GGVPLIC 368 (456)
T ss_dssp HHHTSTTEEEEEECCCHHHHHHHHH---------HTCCEEE
T ss_pred HHhcCCcCCEEEecCCcchHHHHHH---------hCceEEe
Confidence 3443223345566789999877542 3789988
No 287
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.11 E-value=1.9e+02 Score=22.61 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=20.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 12 k~~lVTGas~--------gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAAR--------GQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCeEEEE
Confidence 5666666664 25667777777788877643
No 288
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=27.09 E-value=65 Score=26.47 Aligned_cols=59 Identities=15% Similarity=0.201 Sum_probs=35.5
Q ss_pred ccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEec
Q 044681 8 KSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIP 75 (184)
Q Consensus 8 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP 75 (184)
+..+|+|.++.... ..+......|++.|.++||.+..=..+ ...+ -....|-.++.+-+
T Consensus 12 ~~~~MrIl~~~~~~----~gh~~~~~~La~~L~~~GheV~v~~~~-~~~~----~~~~~G~~~~~~~~ 70 (398)
T 4fzr_A 12 RGSHMRILVIAGCS----EGFVMPLVPLSWALRAAGHEVLVAASE-NMGP----TVTGAGLPFAPTCP 70 (398)
T ss_dssp ---CCEEEEECCSS----HHHHGGGHHHHHHHHHTTCEEEEEEEG-GGHH----HHHHTTCCEEEEES
T ss_pred CCCceEEEEEcCCC----cchHHHHHHHHHHHHHCCCEEEEEcCH-HHHH----HHHhCCCeeEecCC
Confidence 34556888876542 344556778999999999988654333 3322 23346666666643
No 289
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=27.08 E-value=61 Score=25.22 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=21.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 7 k~vlVTGas~--------gIG~a~a~~l~~~G~~V~~~~r~ 39 (247)
T 3rwb_A 7 KTALVTGAAQ--------GIGKAIAARLAADGATVIVSDIN 39 (247)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5666777665 25566777777788877655443
No 290
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=27.07 E-value=61 Score=25.40 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 14 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGGS-GLGRATAVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4578999998 999999999999998888763
No 291
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.05 E-value=54 Score=25.83 Aligned_cols=13 Identities=23% Similarity=0.210 Sum_probs=8.7
Q ss_pred hCCEEEEecCccc
Q 044681 107 YADCFIVLPGGFG 119 (184)
Q Consensus 107 ~sDa~IvlPGG~G 119 (184)
.-|++|-..|-.+
T Consensus 91 ~iD~lv~nAg~~~ 103 (311)
T 3o26_A 91 KLDILVNNAGVAG 103 (311)
T ss_dssp SCCEEEECCCCCS
T ss_pred CCCEEEECCcccc
Confidence 4578887777553
No 292
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=27.01 E-value=65 Score=24.77 Aligned_cols=36 Identities=19% Similarity=0.136 Sum_probs=25.2
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
..-++|.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 12 ~~~k~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~r~ 47 (249)
T 3f9i_A 12 LTGKTSLITGASS--------GIGSAIARLLHKLGSKVIISGSN 47 (249)
T ss_dssp CTTCEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEcCC
Confidence 3446777777765 25677888888889888765544
No 293
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=27.00 E-value=66 Score=27.09 Aligned_cols=37 Identities=16% Similarity=0.330 Sum_probs=26.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHH-HHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNEL-VSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~L-A~~G~~lV~ 48 (184)
++|+|++|....+.+.=...++.+-+.| .+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~ 41 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIV 41 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEE
Confidence 4677776655443333356789999999 899998764
No 294
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=26.97 E-value=28 Score=27.12 Aligned_cols=39 Identities=23% Similarity=0.339 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHH----CCCeEEE---cCCC-cchhHHHHHHHHhcC
Q 044681 29 RKAAIDLGNELVS----KGLDLVY---GGGN-VGLMGLISEEVHRGR 67 (184)
Q Consensus 29 ~~~A~~lG~~LA~----~G~~lV~---GGg~-~GlM~a~a~ga~~~G 67 (184)
.++|+.+|+.||+ .|+.=|. ||.. -|-+.|++++|.++|
T Consensus 112 ~~AA~~VG~liAeRA~e~GI~~VvFDRgg~~YhGRVkAladaaRe~G 158 (161)
T 3bbo_Q 112 IEVAKKVGEVIASACLEKGITKVAFDRGGYPYHGRVKALADAAREKG 158 (161)
T ss_dssp HHHHHHHHHHSSSHHHHTSSCCCCCCCSSSCSSSTTHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcchHHHHHHHHHHHHhC
Confidence 3678889998887 4665442 5532 488999999999987
No 295
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=26.83 E-value=60 Score=25.54 Aligned_cols=18 Identities=11% Similarity=0.115 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHCCCeEEE
Q 044681 31 AAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~ 48 (184)
..+.+.+.|+++|+.|+.
T Consensus 17 IG~~~a~~l~~~G~~V~~ 34 (281)
T 3m1a_A 17 FGRAIAEAAVAAGDTVIG 34 (281)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 344455555555555543
No 296
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=26.81 E-value=2.3e+02 Score=22.10 Aligned_cols=71 Identities=8% Similarity=0.082 Sum_probs=43.1
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCCh---HHHHHHHHH------hCCEEE
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHM---HQRKAEMAR------YADCFI 112 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~---~~Rk~~m~~------~sDa~I 112 (184)
....|||||+. |+=.++++...+.|-+|+.+--+.. . .....-..+..|+ ..-+.++.+ .-|++|
T Consensus 28 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~---~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 101 (260)
T 3un1_A 28 QKVVVITGASQ-GIGAGLVRAYRDRNYRVVATSRSIK---P--SADPDIHTVAGDISKPETADRIVREGIERFGRIDSLV 101 (260)
T ss_dssp CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESSCC---C--CSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEeCChh---h--cccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence 34678899988 9999999999999998887732111 1 1111112223333 333333332 469999
Q ss_pred EecCcc
Q 044681 113 VLPGGF 118 (184)
Q Consensus 113 vlPGG~ 118 (184)
-..|-.
T Consensus 102 ~nAg~~ 107 (260)
T 3un1_A 102 NNAGVF 107 (260)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 988754
No 297
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=26.71 E-value=2.3e+02 Score=22.07 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=0.0
Q ss_pred CccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcC--CeEEEE
Q 044681 1 MEEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGR--RHVLGI 73 (184)
Q Consensus 1 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~G--G~viGv 73 (184)
|..+.-.+-..++|.|.|+++ -..+++.+.|+++|+.|+.-+....-.+.+.+...+.| +.+.-+
T Consensus 22 ~~~~~m~~l~~k~vlVTGasg--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 88 (279)
T 1xg5_A 22 MARPGMERWRDRLALVTGASG--------GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 88 (279)
T ss_dssp -CCTTCGGGTTCEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEE
T ss_pred cccccccccCCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEE
No 298
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=26.68 E-value=64 Score=30.21 Aligned_cols=48 Identities=13% Similarity=0.034 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 25 KYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 25 ~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
+..|-.-+.-+...|+..||.++++|+..- +.+++.|.+.+-.++|+-
T Consensus 520 Da~Hd~ga~~va~~l~~aGfeVi~~g~~~t--ee~v~aa~e~~adiv~lS 567 (637)
T 1req_B 520 RRDFGGREGFSSPVWHIAGIDTPQVEGGTT--AEIVEAFKKSGAQVADLC 567 (637)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCEEECCCH--HHHHHHHHHHTCSEEEEE
T ss_pred chhhhhhHHHHHHHHHhCCeeEEeCCCCCC--HHHHHHHHhcCCCEEEEe
Confidence 447767777778889999999999988755 999999999999999993
No 299
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=26.67 E-value=64 Score=24.85 Aligned_cols=35 Identities=11% Similarity=0.020 Sum_probs=26.6
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
..|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 6 ~~k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGGRG--------ALGSRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETTTS--------HHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECCCc--------HHHHHHHHHHHhCCCEEEEEeCC
Confidence 346788888876 36778888899999998765443
No 300
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=26.63 E-value=44 Score=25.68 Aligned_cols=52 Identities=12% Similarity=0.082 Sum_probs=37.8
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKL 157 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l 157 (184)
..-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.++.++..
T Consensus 69 ~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eqa~eR~ 127 (157)
T 2obx_A 69 GRYGAVLGTAFVVNGGIYRHEFVASAVIDGMMNVQLSTGVPVLSAVLTPHNYHDSAEHH 127 (157)
T ss_dssp TCCSEEEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEEEECBSCCCSCHHHH
T ss_pred CCCCEEEEeeccccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHh
Confidence 4579999987 777766666655443 34443 5899999988898888777764
No 301
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.53 E-value=1.1e+02 Score=22.93 Aligned_cols=33 Identities=12% Similarity=0.030 Sum_probs=20.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL 46 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l 46 (184)
||+|.|+.+|..+ .-.+.|+.+.+.+.+.|+.+
T Consensus 6 mmkilii~~S~~g---~T~~la~~i~~~l~~~g~~v 38 (211)
T 1ydg_A 6 PVKLAIVFYSSTG---TGYAMAQEAAEAGRAAGAEV 38 (211)
T ss_dssp CCEEEEEECCSSS---HHHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEECCCC---hHHHHHHHHHHHHhcCCCEE
Confidence 4566666555533 33467777888777777643
No 302
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=26.50 E-value=63 Score=26.62 Aligned_cols=29 Identities=14% Similarity=0.016 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
|++|.|.|+. +.++.+.+.+.+.|+.++.
T Consensus 1 M~~Ililg~g---------~~~~~~~~a~~~~G~~v~~ 29 (365)
T 2z04_A 1 MLTVGILGGG---------QLGWMTILEGRKLGFKFHV 29 (365)
T ss_dssp -CEEEEECCS---------HHHHHHHHHHGGGTCEEEE
T ss_pred CCEEEEECCC---------HHHHHHHHHHHHCCCEEEE
Confidence 5789999875 4577788888888987663
No 303
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=26.46 E-value=31 Score=28.84 Aligned_cols=37 Identities=11% Similarity=0.155 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++|+|++|....+.+.=...++.+.+.|.+.||.++.
T Consensus 4 ~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (364)
T 2i87_A 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDI 40 (364)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEE
T ss_pred cEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEE
Confidence 4677766655443333356788899999999998763
No 304
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=26.45 E-value=75 Score=23.32 Aligned_cols=60 Identities=25% Similarity=0.289 Sum_probs=32.6
Q ss_pred eEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE-EEcCCCcchhHHHHHHHHhcCCeEEEEecCc
Q 044681 13 RVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDL-VYGGGNVGLMGLISEEVHRGRRHVLGIIPRA 77 (184)
Q Consensus 13 ~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~l-V~GGg~~GlM~a~a~ga~~~GG~viGviP~~ 77 (184)
+|.|+.+|..++. .+.|+.+++.|.+.|+.+ ++=-...- ...+..-..+..+.++|. |.+
T Consensus 2 kv~IvY~S~tGnT---~~~A~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~d~ii~Gs-pty 62 (161)
T 3hly_A 2 SVLIGYLSDYGYS---DRLSQAIGRGLVKTGVAVEMVDLRAVD-PQELIEAVSSARGIVLGT-PPS 62 (161)
T ss_dssp CEEEEECTTSTTH---HHHHHHHHHHHHHTTCCEEEEETTTCC-HHHHHHHHHHCSEEEEEC-CBS
T ss_pred EEEEEEECCChHH---HHHHHHHHHHHHhCCCeEEEEECCCCC-HHHHHHHHHhCCEEEEEc-CCc
Confidence 4555555666642 357888888888888754 22222212 222223344566666664 544
No 305
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=26.40 E-value=1.2e+02 Score=24.02 Aligned_cols=37 Identities=14% Similarity=0.043 Sum_probs=25.0
Q ss_pred CceEEEEcCC-----------CCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 044681 11 FKRVCVFCGS-----------SPD-YKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 11 ~~~I~Vfggs-----------~~~-~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+|+|++++.+ -+. ...-....+.++.+.|+++||.+.
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~ 51 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVF 51 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEE
Confidence 4689999887 111 112334578889999999988765
No 306
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=26.30 E-value=65 Score=25.00 Aligned_cols=33 Identities=12% Similarity=0.181 Sum_probs=22.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 8 KLAVITGGAN--------GIGRAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEcCC
Confidence 5677777765 35667777778888887755443
No 307
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.30 E-value=2.2e+02 Score=22.30 Aligned_cols=54 Identities=9% Similarity=0.116 Sum_probs=29.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcc-------hhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVG-------LMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~G-------lM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+...- -.+...+...+.++++..+
T Consensus 7 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (274)
T 3e03_A 7 KTLFITGASR--------GIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67 (274)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE
T ss_pred cEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE
Confidence 4666666664 2566677777778887765543311 1333343344445555544
No 308
>3bgk_A SMU.573, putative uncharacterized protein; alpha/beta three layer sandwich, unknown function; 2.50A {Streptococcus mutans}
Probab=26.29 E-value=2.8e+02 Score=22.96 Aligned_cols=97 Identities=15% Similarity=0.021 Sum_probs=44.4
Q ss_pred CCCeEEEcCCCcchhHHHHHH---HHhcCC-eEEEEecCcccc-ccccCCCCceEeecCChHHHHHHHHHhCCEEEEecC
Q 044681 42 KGLDLVYGGGNVGLMGLISEE---VHRGRR-HVLGIIPRALMK-KELTGVTLGEVKPVDHMHQRKAEMARYADCFIVLPG 116 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~g---a~~~GG-~viGviP~~~~~-~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlPG 116 (184)
.|..++-||.. +-.+|.... ++..|. .|.-+.|..... .....+.+... ...+. +.-.-+++..|++++=||
T Consensus 58 ~G~vlvIaGsd-~~~GAgilA~~aal~~Gaglvt~~t~q~~~~~v~~~~pe~~~~-~~~~~-~ql~~~~~~~dav~IG~G 134 (311)
T 3bgk_A 58 FGRVLLIGGNY-PYGGAIIMAALACVNSGAGLVTVATHKDNITALHSHLPEAMAF-DMVEK-DRLSEQITAADVVLMGPG 134 (311)
T ss_dssp TCEEEEECCCT-TCHHHHHHHHHHHHHTTCSEEEEEECGGGHHHHHHHCTTSEEE-ETTCH-HHHHHHHHHCSEEEECTT
T ss_pred CCEEEEEECCC-CCCCHHHHHHHHHHHhCcCeEEEEEChhhHhHHhhCChhHhee-ccccH-HHHHHHhccCCEEEEcCC
Confidence 47788888877 666665443 444554 444454432211 00011211110 01111 222334567899888543
Q ss_pred ccccHHHHHHHHHH-HHhCCCCCCEEE
Q 044681 117 GFGTLEKLFEVTTW-SQLGVHNKPVAI 142 (184)
Q Consensus 117 G~GTL~El~~~l~~-~qlg~~~kPvvl 142 (184)
.|+-+|..+++.. .+.-..++|+|+
T Consensus 135 -l~~~~~~~~~v~~~l~~~~~~~pvVl 160 (311)
T 3bgk_A 135 -LAEDDLAQTTFDVVWQAIEPKQTLII 160 (311)
T ss_dssp -CCSSHHHHHHHHHHHHHCCTTSEEEE
T ss_pred -CCCCHHHHHHHHHHHHHcCCCCeEEE
Confidence 3432333333321 111113678877
No 309
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=26.27 E-value=56 Score=26.28 Aligned_cols=41 Identities=15% Similarity=-0.006 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHHHHC----CCeEE---EcCCCc---chhHHHHHHHHhcCC
Q 044681 28 YRKAAIDLGNELVSK----GLDLV---YGGGNV---GLMGLISEEVHRGRR 68 (184)
Q Consensus 28 ~~~~A~~lG~~LA~~----G~~lV---~GGg~~---GlM~a~a~ga~~~GG 68 (184)
-+++|+.+|.+||++ |+.-| -||... |-..|+++||.++|=
T Consensus 79 N~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~y~~hgRV~Ala~gAre~GL 129 (203)
T 3j21_O 79 NTPSAYLLGLLIGYKAKQAGIEEAILDIGLHPPVRGSSVFAVLKGAVDAGL 129 (203)
T ss_dssp SHHHHHHHHHHSSSSTTSSCCCCCEEECCSSCCCTTSHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHhCCCCEEEEecCcceeccCcchhhhhhhcccCCe
Confidence 358999999999984 54433 477764 899999999999875
No 310
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.26 E-value=88 Score=25.19 Aligned_cols=32 Identities=22% Similarity=0.251 Sum_probs=23.3
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+...|++|+|+|... ....++..|+++|+.|+
T Consensus 11 ~~~~~~~I~VIG~G~---------mG~~iA~~la~~G~~V~ 42 (302)
T 1f0y_A 11 KKIIVKHVTVIGGGL---------MGAGIAQVAAATGHTVV 42 (302)
T ss_dssp -CCCCCEEEEECCSH---------HHHHHHHHHHHTTCEEE
T ss_pred ccccCCEEEEECCCH---------HHHHHHHHHHhCCCeEE
Confidence 344578899999753 45567788889999775
No 311
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=26.25 E-value=87 Score=23.84 Aligned_cols=34 Identities=9% Similarity=-0.031 Sum_probs=18.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHC--CCeE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSK--GLDL 46 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~--G~~l 46 (184)
+.+.|+||.+. .++.-.+.++++.+.+.++ |+.+
T Consensus 3 kiLii~gSpr~-~~s~t~~l~~~~~~~~~~~~~g~~v 38 (212)
T 3r6w_A 3 RILAVHASPRG-ERSQSRRLAEVFLAAYREAHPQARV 38 (212)
T ss_dssp CEEEEECCSCS-TTCHHHHHHHHHHHHHHHHCTTCCE
T ss_pred EEEEEEeCCCC-CCCHHHHHHHHHHHHHHHhCCCCeE
Confidence 34444554443 2344456777777777665 5443
No 312
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=26.23 E-value=76 Score=25.86 Aligned_cols=83 Identities=10% Similarity=0.033 Sum_probs=40.8
Q ss_pred CCeEEEcCCCcchhHHHHHHHH-hcCCeEEEEecCcccccccc-CCCCceEeec--CChHHHHHHHHHh--CCEEEEecC
Q 044681 43 GLDLVYGGGNVGLMGLISEEVH-RGRRHVLGIIPRALMKKELT-GVTLGEVKPV--DHMHQRKAEMARY--ADCFIVLPG 116 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~-~~GG~viGviP~~~~~~e~~-~~~~~~~~~~--~~~~~Rk~~m~~~--sDa~IvlPG 116 (184)
...+|+|+|+.|.+ ++.-+. ..|.+||++-.+... .+.. ....+..+.. .+..++-.-+... .|.++...|
T Consensus 165 ~~VlV~GaG~~g~~--a~~~a~~~~g~~Vi~~~~~~~r-~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 165 DWQVIFGAGGLGNL--AIQYAKNVFGAKVIAVDINQDK-LNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTSCCEEEEEESCHHH-HHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CEEEEEcCCCccHH--HHHHHHHhCCCEEEEEECcHHH-hhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 45678888764443 344444 457789988543221 1111 1112223332 3444443333322 245555567
Q ss_pred ccccHHHHHHHH
Q 044681 117 GFGTLEKLFEVT 128 (184)
Q Consensus 117 G~GTL~El~~~l 128 (184)
+--|++.....+
T Consensus 242 ~~~~~~~~~~~l 253 (348)
T 4eez_A 242 ARIAFEQAVASL 253 (348)
T ss_dssp CHHHHHHHHHTE
T ss_pred Ccchhheeheee
Confidence 776776655543
No 313
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=26.19 E-value=69 Score=24.93 Aligned_cols=33 Identities=15% Similarity=0.136 Sum_probs=20.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+-.
T Consensus 13 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 13 RIILVTGASD--------GIGREAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666666654 25566667777777777654443
No 314
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=26.14 E-value=66 Score=24.71 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=21.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 3 k~vlVTGas~--------giG~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 3 RKALVTGGSR--------GIGRAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4677777765 25666777777788877654443
No 315
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=26.02 E-value=66 Score=25.02 Aligned_cols=28 Identities=25% Similarity=0.408 Sum_probs=16.3
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 ~lVTGas~-gIG~aia~~l~~~G~~V~~~ 37 (257)
T 3tpc_A 10 FIVTGASS-GLGAAVTRMLAQEGATVLGL 37 (257)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45566665 66556666666666555544
No 316
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.02 E-value=63 Score=26.48 Aligned_cols=20 Identities=15% Similarity=0.371 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHCCCeEEEcC
Q 044681 31 AAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GG 50 (184)
.-+++++.|+++|..|+.-+
T Consensus 41 IG~aiA~~la~~Ga~V~i~~ 60 (273)
T 4fgs_A 41 IGLAAAKRFVAEGARVFITG 60 (273)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEE
Confidence 33444455555555554433
No 317
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=26.00 E-value=2.3e+02 Score=21.83 Aligned_cols=104 Identities=10% Similarity=0.035 Sum_probs=0.0
Q ss_pred ceEEEEcCC--CCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCC-eEEEEecCccccccccCCCC
Q 044681 12 KRVCVFCGS--SPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRR-HVLGIIPRALMKKELTGVTL 88 (184)
Q Consensus 12 ~~I~Vfggs--~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGviP~~~~~~e~~~~~~ 88 (184)
+++.|.|++ +- ..+++++.|+++|+.|+.-+...-.-+.+.+-..+.++ .+..+ .-.+
T Consensus 8 k~vlVTGasg~~G--------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----------~~D~ 68 (266)
T 3oig_A 8 RNIVVMGVANKRS--------IAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL-----------PCDV 68 (266)
T ss_dssp CEEEEECCCSTTS--------HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEE-----------ECCC
T ss_pred CEEEEEcCCCCCc--------HHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEE-----------eCCC
Q ss_pred ceEeecCChHHHHHHHHHhCCEEEEecCccc-----------cHHHHHHHHHHHHhC
Q 044681 89 GEVKPVDHMHQRKAEMARYADCFIVLPGGFG-----------TLEKLFEVTTWSQLG 134 (184)
Q Consensus 89 ~~~~~~~~~~~Rk~~m~~~sDa~IvlPGG~G-----------TL~El~~~l~~~qlg 134 (184)
++......+.++-.--...-|.+|-..|-.. +.+++...+..+-.+
T Consensus 69 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ 125 (266)
T 3oig_A 69 TNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYS 125 (266)
T ss_dssp SSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHH
T ss_pred CCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHH
No 318
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=25.99 E-value=2.4e+02 Score=22.09 Aligned_cols=30 Identities=20% Similarity=0.297 Sum_probs=24.8
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 29 k~vlVTGas~-gIG~aia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAAG-GIGGAVVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3578899988 99889999888888887765
No 319
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=25.92 E-value=1.1e+02 Score=24.51 Aligned_cols=65 Identities=12% Similarity=-0.033 Sum_probs=36.4
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE---cCCC--------cchhHHHHHHHHhcCCeEEEEecCcc
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY---GGGN--------VGLMGLISEEVHRGRRHVLGIIPRAL 78 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~---GGg~--------~GlM~a~a~ga~~~GG~viGviP~~~ 78 (184)
|+.+.|+||.+. +..-...++.+.+.+.+.|+.+-. .--+ .--|..+.+-..++-+.+++. |.+.
T Consensus 35 mkIliI~GS~r~--~s~t~~La~~~~~~l~~~g~eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~AD~iI~~s-P~Yn 110 (247)
T 2q62_A 35 PRILILYGSLRT--VSYSRLLAEEARRLLEFFGAEVKVFDPSGLPLPDAAPVSHPKVQELRELSIWSEGQVWVS-PERH 110 (247)
T ss_dssp CEEEEEECCCCS--SCHHHHHHHHHHHHHHHTTCEEEECCCTTCCCTTSSCTTSHHHHHHHHHHHHCSEEEEEE-ECSS
T ss_pred CeEEEEEccCCC--CCHHHHHHHHHHHHHhhCCCEEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHHCCEEEEEe-CCCC
Confidence 444555555443 344456788888888777765432 1000 012566666677777766664 6553
No 320
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=25.84 E-value=1.6e+02 Score=23.91 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||+. |+=.++++...+.|.+|+-.
T Consensus 30 KvalVTGas~-GIG~aiA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGATS-GIGLAAAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999998 99999999999999998766
No 321
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=25.84 E-value=1e+02 Score=23.85 Aligned_cols=56 Identities=9% Similarity=0.083 Sum_probs=40.9
Q ss_pred ceEEEEcCCCCCCChHH----------------HHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCY----------------RKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~----------------~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.+|+|+|..+...+-.. .+.+++.-+.|.+.|+.+|-||+- +++-|.+.|-..+=+
T Consensus 95 ~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~------~~~~A~~~Gl~~vli 166 (196)
T 2q5c_A 95 NELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT------VTDEAIKQGLYGETI 166 (196)
T ss_dssp SEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH------HHHHHHHTTCEEEEC
T ss_pred CcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH------HHHHHHHcCCcEEEE
Confidence 58999998886644221 145677778889999999999865 477788888765544
No 322
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=25.83 E-value=1.6e+02 Score=23.76 Aligned_cols=42 Identities=7% Similarity=0.133 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 31 AAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.-+.+++.|+++|..|+.-+-. .. +.+.+...+.|++++.+.
T Consensus 21 IG~aiA~~la~~Ga~Vvi~~r~-~~-~~~~~~~~~~g~~~~~~~ 62 (247)
T 4hp8_A 21 LGQAIAVGLAAAGAEVVCAARR-AP-DETLDIIAKDGGNASALL 62 (247)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS-CC-HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeCC-cH-HHHHHHHHHhCCcEEEEE
Confidence 6677888899999999876655 33 566666777888888874
No 323
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=25.82 E-value=66 Score=25.21 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=20.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+..
T Consensus 9 k~~lVTGas~--------gIG~a~a~~l~~~G~~V~~~~r~ 41 (255)
T 4eso_A 9 KKAIVIGGTH--------GMGLATVRRLVEGGAEVLLTGRN 41 (255)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666666654 25566777777777777655443
No 324
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=25.80 E-value=67 Score=25.06 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=19.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 6 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 37 (254)
T 1hdc_A 6 KTVIITGGAR--------GLGAEAARQAVAAGARVVLADV 37 (254)
T ss_dssp SEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2556666667777777665443
No 325
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=25.80 E-value=2.4e+02 Score=22.17 Aligned_cols=32 Identities=19% Similarity=0.315 Sum_probs=19.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+.
T Consensus 26 k~~lVTGas~--------GIG~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 26 KTAVITGSTS--------GIGLAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666554 2556677777777777765443
No 326
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=25.78 E-value=70 Score=24.94 Aligned_cols=32 Identities=9% Similarity=0.088 Sum_probs=20.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+.
T Consensus 9 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 40 (259)
T 4e6p_A 9 KSALITGSAR--------GIGRAFAEAYVREGATVAIADI 40 (259)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4666667664 2556677777777777765443
No 327
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=25.78 E-value=91 Score=25.22 Aligned_cols=30 Identities=17% Similarity=0.084 Sum_probs=0.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|.|.|++. -....+.+.|+++|+.|+.
T Consensus 1 m~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 30 (372)
T 1db3_A 1 SKVALITGVTG--------QDGSYLAEFLLEKGYEVHG 30 (372)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCCC--------hHHHHHHHHHHHCCCEEEE
No 328
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=25.74 E-value=65 Score=26.02 Aligned_cols=53 Identities=15% Similarity=0.045 Sum_probs=30.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|.+.|-|+++ + .-+++++.|+++|..++.-+...- -.+..+...+.+++++.+
T Consensus 8 KvalVTGas~-G-------IG~aia~~la~~Ga~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~ 60 (258)
T 4gkb_A 8 KVVIVTGGAS-G-------IGGAISMRLAEERAIPVVFARHAP-DGAFLDALAQRQPRATYL 60 (258)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESSCC-CHHHHHHHHHHCTTCEEE
T ss_pred CEEEEeCCCC-H-------HHHHHHHHHHHcCCEEEEEECCcc-cHHHHHHHHhcCCCEEEE
Confidence 4555556554 2 455666777788887765554311 133444455566666666
No 329
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=25.68 E-value=38 Score=26.07 Aligned_cols=52 Identities=12% Similarity=0.109 Sum_probs=37.7
Q ss_pred HhCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHh
Q 044681 106 RYADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKL 157 (184)
Q Consensus 106 ~~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l 157 (184)
..-||+|+|+ |+.--.|-+....+. +++.+ +++||++.+..+++.++.++.-
T Consensus 68 ~~yDavIaLG~VIrG~T~Hfd~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~eqA~er~ 126 (158)
T 1di0_A 68 GRYAAIVGAAFVIDGGIYDHDFVATAVINGMMQVQLETEVPVLSVVLTPHHFHESKEHH 126 (158)
T ss_dssp SCCSEEEEEEECCCCSSBCCHHHHHHHHHHHHHHHHHHCCCEEEEEECBSSCCCSHHHH
T ss_pred CCCCEEEEeeccccCCCcHHHHHHHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHh
Confidence 3479999987 777776666655543 34443 5899999988888888777665
No 330
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=25.65 E-value=2.2e+02 Score=22.25 Aligned_cols=30 Identities=7% Similarity=0.180 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 k~~lVTGas~-GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAAR-GQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc-HHHHHHHHHHHHcCCEEEEE
Confidence 4578999998 99999999999999998876
No 331
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=25.65 E-value=2.3e+02 Score=24.89 Aligned_cols=93 Identities=13% Similarity=0.055 Sum_probs=52.6
Q ss_pred CCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCc-eEeec--CChHHHHHHHHHhCCEEEEecCcc
Q 044681 42 KGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLG-EVKPV--DHMHQRKAEMARYADCFIVLPGGF 118 (184)
Q Consensus 42 ~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~-~~~~~--~~~~~Rk~~m~~~sDa~IvlPGG~ 118 (184)
++|.+|+|.|.. -..+++.-.+.|-.++-|-.+...-.+. .+.+. ..+.. .+-..=++.-++.+|++|+.+.
T Consensus 127 ~~hviI~G~g~~--g~~la~~L~~~~~~vvvid~~~~~~~~~-~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~t~~-- 201 (565)
T 4gx0_A 127 RGHILIFGIDPI--TRTLIRKLESRNHLFVVVTDNYDQALHL-EEQEGFKVVYGSPTDAHVLAGLRVAAARSIIANLS-- 201 (565)
T ss_dssp CSCEEEESCCHH--HHHHHHHTTTTTCCEEEEESCHHHHHHH-HHSCSSEEEESCTTCHHHHHHTTGGGCSEEEECSC--
T ss_pred CCeEEEECCChH--HHHHHHHHHHCCCCEEEEECCHHHHHHH-HHhcCCeEEEeCCCCHHHHHhcCcccCCEEEEeCC--
Confidence 589999999873 3566666666777887774332211111 11111 22322 2333344455678999998543
Q ss_pred ccHHHHHHHHHHHHhCCCCCCEEE
Q 044681 119 GTLEKLFEVTTWSQLGVHNKPVAI 142 (184)
Q Consensus 119 GTL~El~~~l~~~qlg~~~kPvvl 142 (184)
--..+.-+++..+++ ..+++.
T Consensus 202 -D~~n~~~~~~ar~~~--~~~iia 222 (565)
T 4gx0_A 202 -DPDNANLCLTVRSLC--QTPIIA 222 (565)
T ss_dssp -HHHHHHHHHHHHTTC--CCCEEE
T ss_pred -cHHHHHHHHHHHHhc--CceEEE
Confidence 334555556656666 567766
No 332
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=25.64 E-value=55 Score=26.13 Aligned_cols=31 Identities=26% Similarity=0.257 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 34 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 64 (275)
T 4imr_A 34 RTALVTGSSR-GIGAAIAEGLAGAGAHVILHG 64 (275)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEc
Confidence 4578899998 999999999999999888763
No 333
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=25.63 E-value=2.1e+02 Score=22.16 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=23.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
+++.|-|+++ -..+++++.|+++|+.|+.-+..
T Consensus 9 k~~lVTGas~--------GIG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 9 AVAVVTGGSS--------GIGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 5677777665 25677777888888887765544
No 334
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=25.60 E-value=1.8e+02 Score=22.30 Aligned_cols=63 Identities=13% Similarity=0.038 Sum_probs=0.0
Q ss_pred cccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEE
Q 044681 3 EKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 3 ~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGv 73 (184)
.+..++-..++|.|.|+++ -..+++.+.|+++|+.++.-+. ...-.+.+.+...+.+..+.-+
T Consensus 13 ~~~~~~~~~k~vlItGasg--------giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~ 76 (274)
T 1ja9_A 13 SDASKPLAGKVALTTGAGR--------GIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 76 (274)
T ss_dssp ---CCTTTTCEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCCCCCEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEE
No 335
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=25.53 E-value=2.4e+02 Score=22.14 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=22.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+-.
T Consensus 6 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~ 38 (281)
T 3zv4_A 6 EVALITGGAS--------GLGRALVDRFVAEGARVAVLDKS 38 (281)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCcCEEEEEeCC
Confidence 5677777765 25677777888888887755433
No 336
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=25.47 E-value=58 Score=25.44 Aligned_cols=21 Identities=10% Similarity=0.222 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHCCCeEEEcCC
Q 044681 31 AAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GGg 51 (184)
..+++.+.|+++|+.|+.-+.
T Consensus 12 IG~aia~~l~~~G~~V~~~~r 32 (248)
T 3asu_A 12 FGECITRRFIQQGHKVIATGR 32 (248)
T ss_dssp THHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHHCCCEEEEEeC
Confidence 344555666666776664443
No 337
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=25.37 E-value=72 Score=25.26 Aligned_cols=30 Identities=10% Similarity=0.197 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 k~~lVTGas~-gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAAR-GQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCeEEEE
Confidence 4578999998 99999999999999998876
No 338
>3c98_A Syntaxin-binding protein 1; protein complex, alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil; 2.60A {Rattus norvegicus} PDB: 3puj_A
Probab=25.31 E-value=87 Score=28.37 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=37.6
Q ss_pred CEEEEecCccccHHHHHHHHHHHHhCCCCCCEEEEEEecCCHHHHHHHhhhhcCC
Q 044681 109 DCFIVLPGGFGTLEKLFEVTTWSQLGVHNKPVAIIMVSASNAKELVQKLEDYEPS 163 (184)
Q Consensus 109 Da~IvlPGG~GTL~El~~~l~~~qlg~~~kPvvl~i~~~~~~~e~~~~l~~~~~~ 163 (184)
+++|++-|| +|.+|+..+..|.+.. .++-|++.=...-++.+.++.|++.-.+
T Consensus 548 ~iIVFvvGG-vTy~E~~~l~~ls~~~-~~~~viiGsT~Iln~~~fl~~L~~L~k~ 600 (606)
T 3c98_A 548 RLIIFILGG-VSLNEMRCAYEVTQAN-GKWEVLIGSTHILTPQKLLDTLKKLNKT 600 (606)
T ss_dssp EEEEEEETC-EEHHHHHHHHHHHHHH-SSCEEEEEESSEECHHHHHHHHTTTTSC
T ss_pred EEEEEEECC-cCHHHHHHHHHHHHHc-CCcEEEEEeCCeeCHHHHHHHHHHhCCC
Confidence 478888888 5999999988886532 1345666433345899999999876443
No 339
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=25.27 E-value=42 Score=28.02 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|+|+|++|....+.+.=...|..+-+.|-+.||.++
T Consensus 4 kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~ 39 (357)
T 4fu0_A 4 KKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDII 39 (357)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEE
Confidence 467666444433344445678888888888999876
No 340
>2pvp_A D-alanine-D-alanine ligase; 2.40A {Helicobacter pylori}
Probab=25.26 E-value=57 Score=27.62 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=24.2
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
..+|+|+|++|....+.+.=...|+.+-+.|- ||.++.
T Consensus 18 ~~~~~v~vl~gG~s~E~~vSl~S~~~v~~al~--g~~v~~ 55 (367)
T 2pvp_A 18 GSHMEFCVLFGGASFEHEISIVSAIALKGVLK--DRIKYF 55 (367)
T ss_dssp --CCCEEEEEECSSTTHHHHHHHHHHHHHHHG--GGEEEE
T ss_pred ccCCEEEEEECCCCcchhhhHHHHHHHHHHhC--CCeEEE
Confidence 34467887777555444444567888888887 887663
No 341
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=25.25 E-value=97 Score=24.66 Aligned_cols=29 Identities=17% Similarity=0.226 Sum_probs=18.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
|+|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 14 M~ilVtGatG--------~iG~~l~~~L~~~g~~V~~ 42 (342)
T 2x4g_A 14 VKYAVLGATG--------LLGHHAARAIRAAGHDLVL 42 (342)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEE
Confidence 4677777664 2556666666667776653
No 342
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=25.15 E-value=68 Score=25.81 Aligned_cols=30 Identities=13% Similarity=0.225 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (299)
T 3t7c_A 29 KVAFITGAAR-GQGRSHAITLAREGADIIAI 58 (299)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4688999998 99999999999999998876
No 343
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.12 E-value=71 Score=24.76 Aligned_cols=31 Identities=16% Similarity=0.055 Sum_probs=17.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
+++.|.|+++ -..+++.+.|+++|+.++.-+
T Consensus 6 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAH--------GIGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEe
Confidence 4556666554 245556666666666665443
No 344
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=25.12 E-value=1e+02 Score=23.81 Aligned_cols=31 Identities=16% Similarity=0.157 Sum_probs=19.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+
T Consensus 17 k~vlITGasg--------giG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAG--------GIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEc
Confidence 5666777654 255666666777777766543
No 345
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=25.10 E-value=1.6e+02 Score=22.67 Aligned_cols=54 Identities=17% Similarity=0.054 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+...+...+.+..+..+
T Consensus 15 k~vlITGasg--------giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 68 (266)
T 1xq1_A 15 KTVLVTGGTK--------GIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 68 (266)
T ss_dssp CEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEE
No 346
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=25.09 E-value=73 Score=25.07 Aligned_cols=20 Identities=20% Similarity=0.199 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHCCCeEEEcC
Q 044681 31 AAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GG 50 (184)
..+++++.|+++|+.|+.-+
T Consensus 42 IG~aia~~l~~~G~~Vi~~~ 61 (281)
T 3ppi_A 42 LGEATVRRLHADGLGVVIAD 61 (281)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44455555555666555443
No 347
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=25.03 E-value=80 Score=26.25 Aligned_cols=54 Identities=19% Similarity=0.252 Sum_probs=35.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE----------------EcCCCcchhHHHHHHHHhcCCeEEEEec
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV----------------YGGGNVGLMGLISEEVHRGRRHVLGIIP 75 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV----------------~GGg~~GlM~a~a~ga~~~GG~viGviP 75 (184)
|+|+|++-... + ++++.++|.++|+.++ +=||. |-|=.+++-.... -.++||-.
T Consensus 30 mki~iv~~~~~---~-----~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGGD-GT~L~aa~~~~~~-~PilGIN~ 99 (278)
T 1z0s_A 30 MRAAVVYKTDG---H-----VKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGD-GTILRILQKLKRC-PPIFGINT 99 (278)
T ss_dssp CEEEEEESSST---T-----HHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECH-HHHHHHHTTCSSC-CCEEEEEC
T ss_pred eEEEEEeCCcH---H-----HHHHHHHHHHCCCEEEEccccccccCCCCEEEEECCC-HHHHHHHHHhCCC-CcEEEECC
Confidence 35999986432 2 7788888888877653 22346 8776665554444 68899943
No 348
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=25.00 E-value=70 Score=24.90 Aligned_cols=32 Identities=16% Similarity=0.181 Sum_probs=19.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 13 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 44 (263)
T 3ak4_A 13 RKAIVTGGSK--------GIGAAIARALDKAGATVAIADL 44 (263)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2455666666777777664433
No 349
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=24.97 E-value=71 Score=24.88 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=25.9
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 9 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 9 VAVITGSSS-GIGLAIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCc-hHHHHHHHHHHHCCCEEEEEc
Confidence 468999998 999999999999998888763
No 350
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=24.96 E-value=2.3e+02 Score=23.51 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=15.6
Q ss_pred EEEcCCCcchhHHHHHHHHhcCCeEEEEec
Q 044681 46 LVYGGGNVGLMGLISEEVHRGRRHVLGIIP 75 (184)
Q Consensus 46 lV~GGg~~GlM~a~a~ga~~~GG~viGviP 75 (184)
+|.|||..|.| +++.+++.|-+|+.+-|
T Consensus 16 lIlG~G~lg~~--la~aa~~lG~~viv~d~ 43 (377)
T 3orq_A 16 GIIGGGQLGKM--MAQSAQKMGYKVVVLDP 43 (377)
T ss_dssp EEECCSHHHHH--HHHHHHHTTCEEEEEES
T ss_pred EEECCCHHHHH--HHHHHHHCCCEEEEEEC
Confidence 44555543443 45666666666666644
No 351
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.92 E-value=73 Score=25.29 Aligned_cols=54 Identities=17% Similarity=0.177 Sum_probs=36.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC-cchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN-VGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~-~GlM~a~a~ga~~~GG~viGv 73 (184)
|++.|-|+++ -..+++++.|+++|+.++.-... ..--+.+.+...+.|+++..+
T Consensus 32 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 86 (271)
T 3v2g_A 32 KTAFVTGGSR--------GIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI 86 (271)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 5778888775 36778888899999998764333 233444455455567776665
No 352
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=24.91 E-value=73 Score=25.35 Aligned_cols=30 Identities=20% Similarity=0.276 Sum_probs=26.4
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 7 ~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 36 (281)
T 3zv4_A 7 VALITGGAS-GLGRALVDRFVAEGARVAVLD 36 (281)
T ss_dssp EEEEETCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCcCEEEEEe
Confidence 568999998 999999999999999888773
No 353
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.88 E-value=60 Score=25.08 Aligned_cols=20 Identities=5% Similarity=0.077 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHCCCeEEEcC
Q 044681 31 AAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GG 50 (184)
..+++.+.|+++|+.|+.-+
T Consensus 18 IG~~ia~~l~~~G~~V~~~~ 37 (246)
T 2ag5_A 18 IGQAAALAFAREGAKVIATD 37 (246)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEE
Confidence 44555555666666655433
No 354
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=24.85 E-value=2.6e+02 Score=23.11 Aligned_cols=82 Identities=12% Similarity=0.049 Sum_probs=45.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccC-CCCceEeec--CChHHHHHHHH-HhCCEEEEecCccc
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTG-VTLGEVKPV--DHMHQRKAEMA-RYADCFIVLPGGFG 119 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~-~~~~~~~~~--~~~~~Rk~~m~-~~sDa~IvlPGG~G 119 (184)
..+|+|+++ ++=-++.+-|+..|.+||++. +. ...+... -..+..+-. .++.++-.-+. ...|.++=.-|+.-
T Consensus 167 ~VlV~Ga~G-~vG~~a~qla~~~Ga~Vi~~~-~~-~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~ 243 (371)
T 3gqv_A 167 YVLVYGGST-ATATVTMQMLRLSGYIPIATC-SP-HNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVE 243 (371)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEEE-CG-GGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHH
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEe-CH-HHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCchH
Confidence 467788844 444455666777888999885 21 1222111 112233322 23333222221 23688888888877
Q ss_pred cHHHHHHHH
Q 044681 120 TLEKLFEVT 128 (184)
Q Consensus 120 TL~El~~~l 128 (184)
+++..+..+
T Consensus 244 ~~~~~~~~l 252 (371)
T 3gqv_A 244 STTFCFAAI 252 (371)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 887776655
No 355
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.83 E-value=71 Score=24.86 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=19.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
|+|.|.|+++ -..+++.+.|+++|+.|+.-+
T Consensus 7 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 7 KGVLVTGGAR--------GIGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEe
Confidence 4566666654 255666667777777766443
No 356
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=24.77 E-value=75 Score=24.78 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=21.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 39 (267)
T 2gdz_A 8 KVALVTGAAQ--------GIGRAFAEALLLKGAKVALVDW 39 (267)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC--------cHHHHHHHHHHHCCCEEEEEEC
Confidence 4677777665 2566677777778887765443
No 357
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=24.70 E-value=63 Score=25.62 Aligned_cols=28 Identities=21% Similarity=0.380 Sum_probs=13.1
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 17 vlVTGas~-GIG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 17 AIVTGGSS-GIGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp EEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 34444444 44444454444444444433
No 358
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=24.70 E-value=64 Score=25.13 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=18.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+.
T Consensus 10 k~~lVTGas~--------gIG~a~a~~l~~~G~~V~~~~r 41 (248)
T 3op4_A 10 KVALVTGASR--------GIGKAIAELLAERGAKVIGTAT 41 (248)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4555555554 2455666667777777664443
No 359
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.64 E-value=72 Score=25.15 Aligned_cols=30 Identities=10% Similarity=-0.048 Sum_probs=22.1
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
-..|||||+. |+=.++++...+.|-+|+.+
T Consensus 28 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 57 (260)
T 3gem_A 28 APILITGASQ-RVGLHCALRLLEHGHRVIIS 57 (260)
T ss_dssp CCEEESSTTS-HHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4567788777 77777788777777777665
No 360
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=24.62 E-value=63 Score=25.17 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=26.0
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 4 VAMVTGGAQ-GIGRGISEKLAADGFDIAVAD 33 (258)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 999999999999998888763
No 361
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=24.60 E-value=75 Score=25.27 Aligned_cols=28 Identities=32% Similarity=0.475 Sum_probs=0.0
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 34 ~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (273)
T 3uf0_A 34 AVVTGAGS-GIGRAIAHGYARAGAHVLAW 61 (273)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
No 362
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=24.60 E-value=73 Score=24.82 Aligned_cols=30 Identities=30% Similarity=0.219 Sum_probs=26.0
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 11 ~vlVTGas~-giG~~ia~~l~~~G~~V~~~~ 40 (260)
T 2ae2_A 11 TALVTGGSR-GIGYGIVEELASLGASVYTCS 40 (260)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 578999998 999999999999998888763
No 363
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=24.57 E-value=59 Score=26.23 Aligned_cols=29 Identities=17% Similarity=0.071 Sum_probs=19.1
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~V~~~ 41 (261)
T 4h15_A 13 RALITAGTK-GAGAATVSLFLELGAQVLTT 41 (261)
T ss_dssp EEEESCCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccCc-HHHHHHHHHHHHcCCEEEEE
Confidence 346677766 77777777777777766554
No 364
>1c41_A Lumazine synthase; riboflavin biosynthesis, transferase; HET: LMZ; 3.10A {Magnaporthe grisea} SCOP: c.16.1.1
Probab=30.38 E-value=16 Score=29.50 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=38.7
Q ss_pred hCCEEEEec----CccccHHHHHHHHHH--HHhCC-CCCCEEEEEEecCCHHHHHHHhh
Q 044681 107 YADCFIVLP----GGFGTLEKLFEVTTW--SQLGV-HNKPVAIIMVSASNAKELVQKLE 158 (184)
Q Consensus 107 ~sDa~IvlP----GG~GTL~El~~~l~~--~qlg~-~~kPvvl~i~~~~~~~e~~~~l~ 158 (184)
.-||+|+|+ |+.=-.+-+....+. +++.+ .++||++.+..+++.|++++...
T Consensus 110 ~~DAVIaLG~VIrGeT~HfeyVa~~vs~GLm~v~L~~~vPVifGVLT~~t~eQA~~RAg 168 (200)
T 1c41_A 110 PFDALIAIGVLIKGETMHFEYIADSVSHGLMRVQLDTGVPVIFGVLTVLTDDQAKARAG 168 (200)
Confidence 469999886 766666666665543 45554 68999998888999999998874
No 365
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=24.46 E-value=75 Score=25.30 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEEe
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGvi 74 (184)
|++.|-|+++ -..+++++.|+++|+.++.-+. ...-.+.+.+...+.|+.+..+.
T Consensus 30 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (280)
T 4da9_A 30 PVAIVTGGRR--------GIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85 (280)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEecCCC--------HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 5677778765 3677888888999999875442 32344445555555677777664
No 366
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=24.45 E-value=1.1e+02 Score=22.40 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=14.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGL 44 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~ 44 (184)
|+|.|.|++. -..+.+.+.|.++|+
T Consensus 6 ~~vlVtGatG--------~iG~~l~~~l~~~g~ 30 (215)
T 2a35_A 6 KRVLLAGATG--------LTGEHLLDRILSEPT 30 (215)
T ss_dssp CEEEEECTTS--------HHHHHHHHHHHHCTT
T ss_pred ceEEEECCCc--------HHHHHHHHHHHhCCC
Confidence 4666666654 245556666666665
No 367
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=24.41 E-value=29 Score=25.08 Aligned_cols=17 Identities=24% Similarity=0.231 Sum_probs=13.5
Q ss_pred eEEEcCCCcchhHHHHH
Q 044681 45 DLVYGGGNVGLMGLISE 61 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ 61 (184)
.+|-|||++|++-|...
T Consensus 5 V~IIGaGpaGL~aA~~L 21 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQAL 21 (336)
T ss_dssp EEEECCSHHHHHHHHHH
T ss_pred EEEECcCHHHHHHHHHH
Confidence 46789999999887654
No 368
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=24.37 E-value=54 Score=25.38 Aligned_cols=30 Identities=17% Similarity=0.021 Sum_probs=20.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|++.|.|+++- ..+++.+.|+++|+.|+.-
T Consensus 2 k~vlVTGas~g--------IG~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHARHF--------AGPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESSTTST--------THHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCCh--------HHHHHHHHHHHCCCEEEEe
Confidence 45666676652 4556777778888887765
No 369
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=24.33 E-value=64 Score=25.20 Aligned_cols=32 Identities=13% Similarity=0.077 Sum_probs=17.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
+++.|-|+++ -..+++++.|+++|+.|+.-+.
T Consensus 8 k~~lVTGas~--------GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 8 GLAIITGASQ--------GIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEEC
Confidence 4555555554 2445556666666666654443
No 370
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=24.30 E-value=76 Score=25.21 Aligned_cols=32 Identities=16% Similarity=0.138 Sum_probs=17.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 30 k~vlVTGas~--------gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGSR--------GIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEeC
Confidence 4555555543 2445555566666666554443
No 371
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=24.29 E-value=72 Score=25.60 Aligned_cols=54 Identities=13% Similarity=0.101 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC-cchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN-VGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~-~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|.|+++ -..+++++.|+++|+.|+.-+.. ...-+.+.+-..+.|+++..+
T Consensus 48 k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 102 (291)
T 3ijr_A 48 KNVLITGGDS--------GIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLL 102 (291)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEE
Confidence 6788888876 36778888899999998755443 234444444444556666655
No 372
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=24.25 E-value=68 Score=24.93 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=13.4
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 vlVTGas~-gIG~aia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 12 AVVTGGAS-GLGLATTKRLLDAGAQVVVL 39 (257)
T ss_dssp EEEETTTS-HHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 34455544 54445555444444444443
No 373
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=24.21 E-value=2.2e+02 Score=23.57 Aligned_cols=53 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcch--------hHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGL--------MGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~Gl--------M~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++++.|+++|+.|+.-+-. -- ...+++...+.|+.+..+
T Consensus 46 k~vlVTGas~--------GIG~aia~~La~~Ga~Vvl~~r~-~~~~~~l~~~l~~~~~~~~~~g~~~~~~ 106 (346)
T 3kvo_A 46 CTVFITGASR--------GIGKAIALKAAKDGANIVIAAKT-AQPHPKLLGTIYTAAEEIEAVGGKALPC 106 (346)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHTTTCEEEEEESC-CSCCSSSCCCHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCh--------HHHHHHHHHHHHCCCEEEEEECC-hhhhhhhHHHHHHHHHHHHhcCCeEEEE
No 374
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.20 E-value=66 Score=24.61 Aligned_cols=28 Identities=36% Similarity=0.452 Sum_probs=19.6
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.||+||.. |+=.++++...+.|-+|+.+
T Consensus 6 vlITGas~-gIG~~~a~~l~~~G~~V~~~ 33 (236)
T 1ooe_A 6 VIVYGGKG-ALGSAILEFFKKNGYTVLNI 33 (236)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTEEEEEE
T ss_pred EEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 56777776 77777777777777666655
No 375
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.18 E-value=77 Score=25.16 Aligned_cols=33 Identities=15% Similarity=0.131 Sum_probs=27.2
Q ss_pred HCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 41 SKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 41 ~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
+....|||||+. |+=.++++...+.|-+|+.+-
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 55 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGCA 55 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 445789999998 999999999999999888763
No 376
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=24.15 E-value=1.1e+02 Score=23.27 Aligned_cols=30 Identities=13% Similarity=0.190 Sum_probs=0.0
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
..++|.|.|+++ -..+++.+.|+++|+.|+
T Consensus 1 ~~k~vlItGasg--------giG~~~a~~l~~~G~~V~ 30 (250)
T 2cfc_A 1 MSRVAIVTGASS--------GNGLAIATRFLARGDRVA 30 (250)
T ss_dssp CCCEEEEETTTS--------HHHHHHHHHHHHTTCEEE
T ss_pred CCCEEEEeCCCc--------hHHHHHHHHHHHCCCEEE
No 377
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.13 E-value=74 Score=25.08 Aligned_cols=32 Identities=19% Similarity=0.078 Sum_probs=18.4
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|++.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 7 k~vlITGas~--------gIG~aia~~l~~~G~~V~~~~r 38 (263)
T 2a4k_A 7 KTILVTGAAS--------GIGRAALDLFAREGASLVAVDR 38 (263)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666554 2455566666667776664443
No 378
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=24.09 E-value=66 Score=26.41 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHCCCeE-EEcCCCcch----hHHHHHHHHhcCCeEE
Q 044681 31 AAIDLGNELVSKGLDL-VYGGGNVGL----MGLISEEVHRGRRHVL 71 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~l-V~GGg~~Gl----M~a~a~ga~~~GG~vi 71 (184)
.+.++.+.++++|..+ |..- . |+ |..+.+-|.+.|-+++
T Consensus 76 ~~~~~~~ea~~~Gi~~iVi~t-~-G~~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 76 FCKDSILEAIDAGIKLIITIT-E-GIPTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp GHHHHHHHHHHTTCSEEEECC-C-CCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCCEEEEEC-C-CCCHHHHHHHHHHHHHcCCEEE
Confidence 3455566667788775 4322 1 33 4466777777665544
No 379
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=24.05 E-value=75 Score=25.48 Aligned_cols=29 Identities=14% Similarity=0.193 Sum_probs=22.0
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+|++|+|+|.... ...+++.|+++|+.++
T Consensus 2 ~m~~I~iiG~G~m---------G~~~a~~l~~~G~~V~ 30 (302)
T 2h78_A 2 HMKQIAFIGLGHM---------GAPMATNLLKAGYLLN 30 (302)
T ss_dssp -CCEEEEECCSTT---------HHHHHHHHHHTTCEEE
T ss_pred CCCEEEEEeecHH---------HHHHHHHHHhCCCeEE
Confidence 4789999997654 4567777888999875
No 380
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=24.03 E-value=1.8e+02 Score=22.25 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG-NVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg-~~GlM~a~a~ga~~~GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+. ..--.+.+.+...+.+..+.-+
T Consensus 8 k~vlITGasg--------giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~ 62 (261)
T 1gee_A 8 KVVVITGSST--------GLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAV 62 (261)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEE
No 381
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.99 E-value=74 Score=25.08 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=21.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+
T Consensus 11 k~~lVTGas~--------gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 11 KTALITGGAR--------GMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCeEEEEe
Confidence 5667777665 256677777788888877544
No 382
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=23.98 E-value=63 Score=25.12 Aligned_cols=31 Identities=19% Similarity=0.210 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 15 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 45 (260)
T 2zat_A 15 KVALVTASTD-GIGLAIARRLAQDGAHVVVSS 45 (260)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 4578999998 999999999999998888763
No 383
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=23.98 E-value=63 Score=25.18 Aligned_cols=30 Identities=17% Similarity=0.150 Sum_probs=25.9
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||.. |+=.++++...+.|-+|+.+
T Consensus 6 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 35 (260)
T 2qq5_A 6 QVCVVTGASR-GIGRGIALQLCKAGATVYIT 35 (260)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3568999998 99999999999999888776
No 384
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=23.96 E-value=2.7e+02 Score=21.95 Aligned_cols=73 Identities=16% Similarity=0.066 Sum_probs=38.8
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHH--HHHHHhCCEEEEecCccc
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRK--AEMARYADCFIVLPGGFG 119 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk--~~m~~~sDa~IvlPGG~G 119 (184)
-.||+||.+ ++=.++++...+.|-+|+++.-+.....+.....+ + .+..++.... .-.++..|++|-+.|-.+
T Consensus 15 ~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~-~-~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~ 89 (342)
T 2x4g_A 15 KYAVLGATG-LLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEP-E-CRVAEMLDHAGLERALRGLDGVIFSAGYYP 89 (342)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCC-E-EEECCTTCHHHHHHHTTTCSEEEEC-----
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCe-E-EEEecCCCHHHHHHHHcCCCEEEECCccCc
Confidence 378999977 77778888888888888887521110011111111 2 2233442222 223456899998887544
No 385
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=23.95 E-value=74 Score=25.13 Aligned_cols=32 Identities=22% Similarity=0.224 Sum_probs=19.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 10 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 41 (270)
T 1yde_A 10 KVVVVTGGGR--------GIGAGIVRAFVNSGARVVICDK 41 (270)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4666666654 2556666667777777665443
No 386
>1ag9_A Flavodoxin; electron transport, reductive activation; HET: FMN BTB; 1.80A {Escherichia coli} SCOP: c.23.5.1 PDB: 1ahn_A*
Probab=23.94 E-value=42 Score=24.97 Aligned_cols=21 Identities=14% Similarity=0.287 Sum_probs=12.2
Q ss_pred chhHHHHHHHHhcCCeEEEEe
Q 044681 54 GLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 54 GlM~a~a~ga~~~GG~viGvi 74 (184)
..+..+.+-..+.|..++|-.
T Consensus 99 ~a~~~l~~~l~~~G~~~v~~~ 119 (175)
T 1ag9_A 99 DALGTIRDIIEPRGATIVGHW 119 (175)
T ss_dssp HHHHHHHHHHTTTTCEECCCE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 344555555555777777743
No 387
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=23.94 E-value=49 Score=26.92 Aligned_cols=29 Identities=24% Similarity=0.237 Sum_probs=25.8
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.+.++...+.|.+|+-.
T Consensus 11 valVTGas~-GIG~aiA~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 11 KALVTGANT-GLGQAIAVGLAAAGAEVVCA 39 (247)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcCC-HHHHHHHHHHHHcCCEEEEE
Confidence 468899998 99999999999999998765
No 388
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.93 E-value=81 Score=24.53 Aligned_cols=31 Identities=13% Similarity=0.069 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 20 k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 20 KGVLVLAASR-GIGRAVADVLSQEGAEVTICA 50 (249)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEc
Confidence 4578999998 999999999999998888763
No 389
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.92 E-value=1.1e+02 Score=23.16 Aligned_cols=29 Identities=21% Similarity=0.124 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.
T Consensus 8 ~~vlVTGasg--------giG~~~a~~l~~~G~~V~~ 36 (244)
T 1cyd_A 8 LRALVTGAGK--------GIGRDTVKALHASGAKVVA 36 (244)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEE
No 390
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=23.92 E-value=96 Score=25.81 Aligned_cols=84 Identities=17% Similarity=0.197 Sum_probs=45.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEeec----CChHHHHHHHH-HhCCEEEEec
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRR-HVLGIIPRALMKKELTG-VTLGEVKPV----DHMHQRKAEMA-RYADCFIVLP 115 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGviP~~~~~~e~~~-~~~~~~~~~----~~~~~Rk~~m~-~~sDa~IvlP 115 (184)
...+|+|+|+.|+|- .+-|+..|. +|+++-++.. ..+... -..+..+.. .++.++-.-+. ...|.++-.-
T Consensus 195 ~~VlV~GaG~vG~~a--~q~a~~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 195 SNVAIFGLGTVGLAV--AEGAKTAGASRIIGIDIDSK-KYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CCEEEECCSHHHHHH--HHHHHHHTCSCEEEECSCTT-HHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHHH--HHHHHHcCCCeEEEEcCCHH-HHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 567889987777664 444556676 7998853221 111111 112223322 23332222221 1368888888
Q ss_pred CccccHHHHHHHHH
Q 044681 116 GGFGTLEKLFEVTT 129 (184)
Q Consensus 116 GG~GTL~El~~~l~ 129 (184)
|+.-++++.+..+.
T Consensus 272 g~~~~~~~~~~~l~ 285 (378)
T 3uko_A 272 GNVSVMRAALECCH 285 (378)
T ss_dssp CCHHHHHHHHHTBC
T ss_pred CCHHHHHHHHHHhh
Confidence 88778777766553
No 391
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=23.90 E-value=76 Score=24.70 Aligned_cols=33 Identities=30% Similarity=0.257 Sum_probs=23.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAGSS--------GLGFASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 5777777765 35677777888888887755443
No 392
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=23.89 E-value=78 Score=25.21 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 26 k~~lVTGas~-GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 26 KTAVITGSTS-GIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999998 99999999999999988876
No 393
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=23.87 E-value=1.7e+02 Score=23.48 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.+.++...+.|..|+-+
T Consensus 9 valVTGas~-GIG~aia~~la~~Ga~Vv~~ 37 (258)
T 4gkb_A 9 VVIVTGGAS-GIGGAISMRLAEERAIPVVF 37 (258)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHcCCEEEEE
Confidence 468999998 99999999999999988766
No 394
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=23.86 E-value=1.1e+02 Score=23.91 Aligned_cols=31 Identities=23% Similarity=0.213 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 31 k~vlVTGas~-GIG~aia~~l~~~G~~Vi~~~ 61 (281)
T 3ppi_A 31 ASAIVSGGAG-GLGEATVRRLHADGLGVVIAD 61 (281)
T ss_dssp EEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 3578899998 999999999999998888763
No 395
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=23.86 E-value=75 Score=25.06 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 22 k~~lVTGas~-gIG~~ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 22 RVALVTGGSR-GLGFGIAQGLAEAGCSVVVAS 52 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999998888764
No 396
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=23.84 E-value=98 Score=24.24 Aligned_cols=35 Identities=11% Similarity=0.080 Sum_probs=24.0
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
++.|+|+ |...+...- -.|..|+..||+.|+.++.
T Consensus 18 ~~vI~v~-s~kGGvGKT--T~a~nLA~~la~~G~~Vll 52 (262)
T 2ph1_A 18 KSRIAVM-SGKGGVGKS--TVTALLAVHYARQGKKVGI 52 (262)
T ss_dssp SCEEEEE-CSSSCTTHH--HHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEE-cCCCCCCHH--HHHHHHHHHHHHCCCeEEE
Confidence 3455555 455565554 3788899999999987664
No 397
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=23.77 E-value=69 Score=24.49 Aligned_cols=48 Identities=10% Similarity=0.171 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGR 67 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~G 67 (184)
+++.|.|+++ -..+++.+.|+++|+.|+.-+...--.+.+.+...+.+
T Consensus 15 k~vlITGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~ 62 (247)
T 3i1j_A 15 RVILVTGAAR--------GIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG 62 (247)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC
Confidence 5677777765 36778888889999998876655233333444444444
No 398
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=23.72 E-value=63 Score=25.40 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=26.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 7 ~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 7 VWLVTGASS-GFGRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 468899998 999999999999999998874
No 399
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=23.70 E-value=62 Score=25.45 Aligned_cols=11 Identities=0% Similarity=0.141 Sum_probs=7.4
Q ss_pred CceEEEEcCCC
Q 044681 11 FKRVCVFCGSS 21 (184)
Q Consensus 11 ~~~I~Vfggs~ 21 (184)
|++|.|.|++.
T Consensus 2 ~~~vlVtGatG 12 (307)
T 2gas_A 2 ENKILILGPTG 12 (307)
T ss_dssp CCCEEEESTTS
T ss_pred CcEEEEECCCc
Confidence 45677777754
No 400
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=23.66 E-value=1.2e+02 Score=24.75 Aligned_cols=42 Identities=19% Similarity=0.111 Sum_probs=25.2
Q ss_pred ceEEEEcCCCCCCCh--------HHHHHHHHHHHHHHHC--CCeEEEcCCCc
Q 044681 12 KRVCVFCGSSPDYKY--------CYRKAAIDLGNELVSK--GLDLVYGGGNV 53 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~--------~~~~~A~~lG~~LA~~--G~~lV~GGg~~ 53 (184)
+.|.=+||+...... ...+.++++..+..+. ...||.|||+.
T Consensus 25 ~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~G~~~vViVhGgG~~ 76 (286)
T 3d40_A 25 FLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAETYRGRMVLISGGGAF 76 (286)
T ss_dssp EEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHHTTTSEEEEECCCCC
T ss_pred EEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHcCCCeEEEEECCHHH
Confidence 456667877655332 3455666666544332 25688999984
No 401
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=23.62 E-value=87 Score=25.54 Aligned_cols=30 Identities=20% Similarity=0.102 Sum_probs=26.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-.|+.+-
T Consensus 10 ~vlVTGas~-gIG~~la~~l~~~G~~Vv~~~ 39 (319)
T 3ioy_A 10 TAFVTGGAN-GVGIGLVRQLLNQGCKVAIAD 39 (319)
T ss_dssp EEEEETTTS-THHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEcCCch-HHHHHHHHHHHHCCCEEEEEE
Confidence 578999998 999999999999999988874
No 402
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=23.61 E-value=60 Score=25.44 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 12 k~~lVTGas~-gIG~~ia~~l~~~G~~V~~~~ 42 (276)
T 1mxh_A 12 PAAVITGGAR-RIGHSIAVRLHQQGFRVVVHY 42 (276)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999999888773
No 403
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.61 E-value=93 Score=24.33 Aligned_cols=31 Identities=10% Similarity=0.089 Sum_probs=26.8
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 12 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVGP-ALGTTLARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCCT-THHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCc-HHHHHHHHHHHHCcCEEEEEe
Confidence 4578999998 999999999999999888763
No 404
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.58 E-value=2.6e+02 Score=21.74 Aligned_cols=31 Identities=13% Similarity=0.104 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 11 k~~lVTGas~-gIG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 11 KTALITGGAR-GMGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-hHHHHHHHHHHHCCCeEEEEe
Confidence 4578999998 999999999999999887763
No 405
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=23.54 E-value=83 Score=24.17 Aligned_cols=33 Identities=12% Similarity=0.016 Sum_probs=20.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 8 k~vlITGasg--------giG~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 8 ALALVTGAGS--------GIGRAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666777664 25566677777777777655433
No 406
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=23.54 E-value=1e+02 Score=23.60 Aligned_cols=30 Identities=27% Similarity=0.230 Sum_probs=25.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 4 ~vlVTGas~-giG~~~a~~l~~~G~~V~~~~ 33 (239)
T 2ekp_A 4 KALVTGGSR-GIGRAIAEALVARGYRVAIAS 33 (239)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 999999999999998887763
No 407
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.53 E-value=76 Score=25.21 Aligned_cols=30 Identities=7% Similarity=0.074 Sum_probs=19.6
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|.|.|++.. ..+.+.+.|.++|+.++.
T Consensus 4 ~~~ilVtGatG~--------iG~~l~~~L~~~g~~V~~ 33 (321)
T 3c1o_A 4 MEKIIIYGGTGY--------IGKFMVRASLSFSHPTFI 33 (321)
T ss_dssp CCCEEEETTTST--------THHHHHHHHHHTTCCEEE
T ss_pred ccEEEEEcCCch--------hHHHHHHHHHhCCCcEEE
Confidence 567999997653 344555666666776654
No 408
>2f9z_C Protein (chemotaxis methylation protein); bacterial chemotaxis, signal transduction, receptor deamidas aspartyl phosphatase, protein complex; 2.40A {Thermotoga maritima} SCOP: d.194.1.3
Probab=23.52 E-value=1.9e+02 Score=22.00 Aligned_cols=44 Identities=18% Similarity=0.045 Sum_probs=33.0
Q ss_pred ccccccCCceEEEEcCCCCCC---ChHHHHHHHHHHHHHHHCCCeEE
Q 044681 4 KKEAKSRFKRVCVFCGSSPDY---KYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 4 ~~~~~~~~~~I~Vfggs~~~~---~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|.+.+++...+-||||++.-. ...=.+-++..=+.|.++|+.|+
T Consensus 76 ~~Ga~~~~L~aKifGGA~m~~~~~~~IG~rNv~~a~~~L~~~gI~i~ 122 (159)
T 2f9z_C 76 KMGAKVERLEAKIAGGASMFESKGMNIGARNVEAVKKHLKDFGIKLL 122 (159)
T ss_dssp TTTCCGGGCEEEEEECCCCSCCCSSCHHHHHHHHHHHHHHHTTCCEE
T ss_pred HcCCCHHHEEEEEEeCcccCcccccChHHHHHHHHHHHHHHCCCcEE
Confidence 567777778999999999542 23445566666678999999998
No 409
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=23.50 E-value=85 Score=23.72 Aligned_cols=29 Identities=24% Similarity=0.369 Sum_probs=25.2
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.||+||.+ |+=.++++...+.|-+|+.+-
T Consensus 4 vlVtGasg-~iG~~l~~~L~~~g~~V~~~~ 32 (255)
T 2dkn_A 4 IAITGSAS-GIGAALKELLARAGHTVIGID 32 (255)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHhCCCEEEEEe
Confidence 58999988 999999999999998888873
No 410
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.50 E-value=68 Score=25.38 Aligned_cols=32 Identities=22% Similarity=0.236 Sum_probs=17.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 29 k~vlITGasg--------gIG~~la~~l~~~G~~V~~~~r 60 (286)
T 1xu9_A 29 KKVIVTGASK--------GIGREMAYHLAKMGAHVVVTAR 60 (286)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEEC
Confidence 4555555543 2455556666666666654443
No 411
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.49 E-value=66 Score=25.62 Aligned_cols=17 Identities=18% Similarity=0.223 Sum_probs=8.2
Q ss_pred HHHHHHHHHCCCeEEEc
Q 044681 33 IDLGNELVSKGLDLVYG 49 (184)
Q Consensus 33 ~~lG~~LA~~G~~lV~G 49 (184)
+++++.|+++|+.|+.-
T Consensus 35 ~aia~~La~~G~~V~~~ 51 (272)
T 2nwq_A 35 EACARRFAEAGWSLVLT 51 (272)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 34444455555555433
No 412
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=23.49 E-value=1.1e+02 Score=24.64 Aligned_cols=31 Identities=13% Similarity=-0.071 Sum_probs=0.0
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
.+|+|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 26 ~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 56 (352)
T 1sb8_A 26 QPKVWLITGVAG--------FIGSNLLETLLKLDQKVVG 56 (352)
T ss_dssp SCCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECCCc--------HHHHHHHHHHHHCCCEEEE
No 413
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.48 E-value=82 Score=24.69 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 9 k~~lVTGas~-GIG~aia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 9 AVAVVTGGSS-GIGLATVELLLEAGAAVAFCA 39 (265)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999999888763
No 414
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.47 E-value=2e+02 Score=22.47 Aligned_cols=31 Identities=16% Similarity=0.163 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 29 k~vlITGasg-gIG~~la~~l~~~G~~V~~~~ 59 (286)
T 1xu9_A 29 KKVIVTGASK-GIGREMAYHLAKMGAHVVVTA 59 (286)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEE
Confidence 4678999998 999999999999998888774
No 415
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=23.47 E-value=1.6e+02 Score=24.17 Aligned_cols=59 Identities=14% Similarity=0.014 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE-----EcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 7 AKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV-----YGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV-----~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
++-..++|.|.|+|+ -..+++.+.|+++|+.|+ .-+...---+.+.+...+.+..+..+
T Consensus 1 M~m~~k~vlVTGas~--------GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~ 64 (324)
T 3u9l_A 1 MVMSKKIILITGASS--------GFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTL 64 (324)
T ss_dssp ----CCEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCCCEEEEECCCc--------HHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEE
No 416
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=23.46 E-value=79 Score=24.55 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=25.9
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 33 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAIAD 33 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 999999999999998888763
No 417
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.45 E-value=82 Score=24.86 Aligned_cols=30 Identities=10% Similarity=0.142 Sum_probs=17.8
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 16 k~~lVTGas~--------gIG~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 16 RVAFITGAAR--------GQGRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEE
Confidence 4555666554 24556666667777766643
No 418
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=23.44 E-value=66 Score=28.46 Aligned_cols=29 Identities=21% Similarity=0.074 Sum_probs=25.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHh-cCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHR-GRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~-~GG~viGv 73 (184)
..|||||+. |+=.|+++...+ .|..|+.+
T Consensus 63 vaLVTGASs-GIG~AiA~~LA~~~GA~Vv~~ 92 (422)
T 3s8m_A 63 KVLVIGASS-GYGLASRITAAFGFGADTLGV 92 (422)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEECCCh-HHHHHHHHHHHHhCCCEEEEE
Confidence 368999998 999999999988 89999887
No 419
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=23.39 E-value=81 Score=25.19 Aligned_cols=54 Identities=9% Similarity=0.069 Sum_probs=35.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
+++.|-|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.++.+..+
T Consensus 29 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 82 (283)
T 3v8b_A 29 PVALITGAGS--------GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIAL 82 (283)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 5677888775 36778888899999999876655223333444444456666665
No 420
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=23.34 E-value=68 Score=26.34 Aligned_cols=23 Identities=22% Similarity=0.408 Sum_probs=16.7
Q ss_pred HhCCEEEEecCcc-ccHHHHHHHH
Q 044681 106 RYADCFIVLPGGF-GTLEKLFEVT 128 (184)
Q Consensus 106 ~~sDa~IvlPGG~-GTL~El~~~l 128 (184)
..+|++|||+||. ..+++.++.+
T Consensus 35 ~~~D~IVVLG~~~~~Rl~~A~~L~ 58 (266)
T 3ca8_A 35 YQADCVILAGNAVMPTIDAACKIA 58 (266)
T ss_dssp CCCSEEEEESCCCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCchHHHHHHHHHH
Confidence 3689999999986 5666655554
No 421
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=23.32 E-value=83 Score=24.82 Aligned_cols=31 Identities=13% Similarity=0.175 Sum_probs=16.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+
T Consensus 12 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~ 42 (271)
T 3tzq_B 12 KVAIITGACG--------GIGLETSRVLARAGARVVLAD 42 (271)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEc
Confidence 4555555554 245555666666666655433
No 422
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=23.31 E-value=2.3e+02 Score=20.93 Aligned_cols=35 Identities=17% Similarity=0.255 Sum_probs=26.0
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
.||+|.|.|++. -..+.+.+.|.++|+.|+.-...
T Consensus 3 ~m~~ilItGatG--------~iG~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 3 KVKKIVLIGASG--------FVGSALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CCCEEEEETCCH--------HHHHHHHHHHHTTTCEEEEECSC
T ss_pred CCCEEEEEcCCc--------hHHHHHHHHHHHCCCEEEEEEcC
Confidence 467899999875 36777888888889887755443
No 423
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=23.26 E-value=82 Score=24.91 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=21.3
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
+++.|-|+++ -..+++++.|+++|+.|+.-+..
T Consensus 28 k~~lVTGas~--------GIG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4fc7_A 28 KVAFITGGGS--------GIGFRIAEIFMRHGCHTVIASRS 60 (277)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHTTTCEEEEEESC
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666666664 25666777777788777655443
No 424
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=23.21 E-value=1.4e+02 Score=22.76 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=23.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
+.|+|++ .+.+...- -.|..|+..||++|+.++.
T Consensus 3 ~vi~v~s-~kgGvGKT--t~a~~LA~~la~~g~~Vll 36 (260)
T 3q9l_A 3 RIIVVTS-GKGGVGKT--TSSAAIATGLAQKGKKTVV 36 (260)
T ss_dssp EEEEEEC-SSTTSSHH--HHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEEC-CCCCCcHH--HHHHHHHHHHHhCCCcEEE
Confidence 4555555 45555544 4788999999999987764
No 425
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=23.19 E-value=70 Score=25.47 Aligned_cols=31 Identities=19% Similarity=0.164 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 5 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 35 (264)
T 3tfo_A 5 KVILITGASG-GIGEGIARELGVAGAKILLGA 35 (264)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCcc-HHHHHHHHHHHHCCCEEEEEE
Confidence 3578999998 999999999999999888763
No 426
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=23.16 E-value=83 Score=24.84 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=18.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
|+|.|-|+++ -..+++++.|+++|+.|+.-+-
T Consensus 12 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r 43 (281)
T 3svt_A 12 RTYLVTGGGS--------GIGKGVAAGLVAAGASVMIVGR 43 (281)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2455666666667776654443
No 427
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=23.14 E-value=86 Score=24.32 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=26.8
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...||+||.. |+=.++++...+.|-+|+.+-
T Consensus 17 k~vlITGasg-giG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAG-GIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEc
Confidence 4578999998 999999999999998888773
No 428
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=23.13 E-value=1.6e+02 Score=22.74 Aligned_cols=64 Identities=13% Similarity=0.084 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCcccccc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKE 82 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e 82 (184)
++|.|.|++..+ ..+++++.|+++|+.|+.-+...--.+.+.+...+.++.-+-+++-.+...+
T Consensus 23 k~vlITGasg~G-------IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 86 (266)
T 3o38_A 23 KVVLVTAAAGTG-------IGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTE 86 (266)
T ss_dssp CEEEESSCSSSS-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHH
T ss_pred CEEEEECCCCCc-------hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHH
No 429
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=23.11 E-value=3.4e+02 Score=22.84 Aligned_cols=12 Identities=25% Similarity=0.224 Sum_probs=7.8
Q ss_pred CHHHHHHHhhhh
Q 044681 149 NAKELVQKLEDY 160 (184)
Q Consensus 149 ~~~e~~~~l~~~ 160 (184)
|.+++.+.++++
T Consensus 148 ~~~~~~~~~~~~ 159 (403)
T 3k5i_A 148 TPAELAKVGEQL 159 (403)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 677776666654
No 430
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=23.06 E-value=83 Score=24.81 Aligned_cols=28 Identities=25% Similarity=0.246 Sum_probs=20.6
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|+|.|.|++.. ....|.+.|.++||.|+
T Consensus 1 MkILVTGatGf--------IG~~L~~~L~~~G~~V~ 28 (298)
T 4b4o_A 1 MRVLVGGGTGF--------IGTALTQLLNARGHEVT 28 (298)
T ss_dssp CEEEEETTTSH--------HHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCCH--------HHHHHHHHHHHCCCEEE
Confidence 56888888752 56677778888888765
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=23.06 E-value=2.3e+02 Score=20.92 Aligned_cols=33 Identities=9% Similarity=0.218 Sum_probs=25.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|++. -..+.+.+.|.++|+.|+.-...
T Consensus 1 M~ilItGatG--------~iG~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGSTG--------RVGKSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECC
Confidence 4799999875 36778888899999998765544
No 432
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=23.04 E-value=1.5e+02 Score=22.25 Aligned_cols=34 Identities=9% Similarity=0.147 Sum_probs=23.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
+.|+|++ ...+...- -.|..|+..||++|+.++.
T Consensus 3 ~~i~v~s-~kgGvGKT--t~a~~LA~~la~~g~~Vll 36 (237)
T 1g3q_A 3 RIISIVS-GKGGTGKT--TVTANLSVALGDRGRKVLA 36 (237)
T ss_dssp EEEEEEC-SSTTSSHH--HHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEec-CCCCCCHH--HHHHHHHHHHHhcCCeEEE
Confidence 4566655 45454544 4788999999999987663
No 433
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=23.00 E-value=84 Score=24.96 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=23.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|-|+++ -..+++.+.|+++|+.|+.-+..
T Consensus 17 k~vlVTGas~--------gIG~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGANS--------GLGAVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCC--------hHHHHHHHHHHHCCCEEEEEECC
Confidence 5777777765 36677778888888888766554
No 434
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.93 E-value=63 Score=25.61 Aligned_cols=20 Identities=15% Similarity=0.230 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHCCCeEEEcC
Q 044681 31 AAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~GG 50 (184)
..+++.+.|+++|+.|+.-+
T Consensus 41 IG~~ia~~l~~~G~~V~~~~ 60 (283)
T 1g0o_A 41 IGREMAMELGRRGCKVIVNY 60 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44555566666666655433
No 435
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=22.92 E-value=80 Score=24.94 Aligned_cols=31 Identities=16% Similarity=0.082 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 7 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 37 (274)
T 3e03_A 7 KTLFITGASR-GIGLAIALRAARDGANVAIAA 37 (274)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999999888763
No 436
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=22.90 E-value=52 Score=27.87 Aligned_cols=36 Identities=22% Similarity=0.219 Sum_probs=24.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++|+|++|....+.+.=...|..+-+.|-+.+|.++
T Consensus 11 ~~v~vl~GG~S~E~~vS~~sa~~v~~~l~~~~~~v~ 46 (373)
T 3lwb_A 11 VRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVI 46 (373)
T ss_dssp EEEEEEEEC-----CHHHHHHHHHHHHSCTTTEEEE
T ss_pred cEEEEEecCCCCChhhHHHHHHHHHHHhhhcCceEE
Confidence 466666665555566767899999999988888776
No 437
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=22.88 E-value=88 Score=23.87 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 12 k~vlITGasg-giG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 12 ACAAVTGAGS-GIGLEICRAFAASGARLILID 42 (254)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 4578999998 999999999999998888774
No 438
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=22.84 E-value=63 Score=24.85 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 15 k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 15 KTSLITGASS-GIGSAIARLLHKLGSKVIISG 45 (249)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEc
Confidence 4578999998 999999999999998888764
No 439
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=22.82 E-value=44 Score=29.57 Aligned_cols=34 Identities=12% Similarity=0.081 Sum_probs=23.2
Q ss_pred HCCCeEEEcCCCcchhHHHHHHHHh----cCC---eEEEEe
Q 044681 41 SKGLDLVYGGGNVGLMGLISEEVHR----GRR---HVLGII 74 (184)
Q Consensus 41 ~~G~~lV~GGg~~GlM~a~a~ga~~----~GG---~viGvi 74 (184)
++++.++++||++-.|-++.+++.+ .|. +|+|+.
T Consensus 3 ~kni~VltsGGdapGmNa~Ir~vv~~a~~~g~~~~~V~Gi~ 43 (419)
T 3hno_A 3 AKNAFYAQSGGVTAVINASAAGVIEAARKQSGKIGRIYAGR 43 (419)
T ss_dssp CCEEEEEECSSCCSSHHHHHHHHHHHHHHHCSSCCCEEEET
T ss_pred CceEEEEccCCChHHHHHHHHHHHHHHHHcCCCCcEEEEEe
Confidence 4567778888887777766665554 455 788874
No 440
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=22.81 E-value=1.1e+02 Score=23.50 Aligned_cols=39 Identities=13% Similarity=0.144 Sum_probs=0.0
Q ss_pred CccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 1 MEEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 1 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
|-.....+-..++|.|.|+++ -..+++.+.|+++|+.|+
T Consensus 4 ~~~~~~~~~~~k~vlITGasg--------giG~~~a~~l~~~G~~V~ 42 (265)
T 1h5q_A 4 MAPGFTISFVNKTIIVTGGNR--------GIGLAFTRAVAAAGANVA 42 (265)
T ss_dssp --CCEEECCTTEEEEEETTTS--------HHHHHHHHHHHHTTEEEE
T ss_pred CCCCCCcccCCCEEEEECCCc--------hHHHHHHHHHHHCCCeEE
No 441
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=22.79 E-value=2.2e+02 Score=22.23 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhc-CCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRG-RRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~-GG~viGv 73 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+...--.+...+...+. +..+.-+
T Consensus 27 k~vlITGasg--------giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 81 (302)
T 1w6u_A 27 KVAFITGGGT--------GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAI 81 (302)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEE
No 442
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=22.77 E-value=85 Score=23.82 Aligned_cols=30 Identities=13% Similarity=0.166 Sum_probs=25.8
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-.|+.+-
T Consensus 4 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 4 VAVITGASR-GIGEAIARALARDGYALALGA 33 (235)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 468999998 999999999999998887764
No 443
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=22.77 E-value=77 Score=25.50 Aligned_cols=39 Identities=10% Similarity=-0.089 Sum_probs=0.0
Q ss_pred ccccccccCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 2 EEKKEAKSRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 2 ~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
|-.+.++-.+|+|.|.|++. -..+.|.+.|.++|+.|+.
T Consensus 16 ~~~~~~~~~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 54 (351)
T 3ruf_A 16 EITQQLIFSPKTWLITGVAG--------FIGSNLLEKLLKLNQVVIG 54 (351)
T ss_dssp HHHHHHHHSCCEEEEETTTS--------HHHHHHHHHHHHTTCEEEE
T ss_pred hHHhhCCCCCCeEEEECCCc--------HHHHHHHHHHHHCCCEEEE
No 444
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=22.76 E-value=87 Score=24.50 Aligned_cols=30 Identities=13% Similarity=0.065 Sum_probs=26.3
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 9 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAGR-DIGRACAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999998 99999999999999998876
No 445
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=22.76 E-value=1.4e+02 Score=23.56 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 17 k~vlVTGas~-gIG~~~a~~L~~~G~~V~~~~ 47 (291)
T 3rd5_A 17 RTVVITGANS-GLGAVTARELARRGATVIMAV 47 (291)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-hHHHHHHHHHHHCCCEEEEEE
Confidence 3578899998 999999999999999888774
No 446
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=22.74 E-value=2.2e+02 Score=23.42 Aligned_cols=57 Identities=12% Similarity=-0.089 Sum_probs=40.2
Q ss_pred CCCCCCChHHHHHHHHHHHHHHH----CCCeEEEcCCCcchhHHHHHHHHhcC--CeEEEEecC
Q 044681 19 GSSPDYKYCYRKAAIDLGNELVS----KGLDLVYGGGNVGLMGLISEEVHRGR--RHVLGIIPR 76 (184)
Q Consensus 19 gs~~~~~~~~~~~A~~lG~~LA~----~G~~lV~GGg~~GlM~a~a~ga~~~G--G~viGviP~ 76 (184)
++++..-.-|...+.|+-+.+.+ -.+.++.-|++ |..-.++++.++.+ -+++||=|.
T Consensus 166 ~~np~~~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtG-gt~~Gi~~~~k~~~~~~~vigVe~~ 228 (341)
T 1f2d_A 166 SEHKYGGLGFVGFADEVINQEVELGIKFDKIVVCCVTG-STTAGILAGMAQYGRQDDVIAIDAS 228 (341)
T ss_dssp TTSTTTTTHHHHHHHHHHHHHHHHTCCCSEEEEEESSS-HHHHHHHHHHGGGTCGGGEEEEECS
T ss_pred CCCCccHHHHHHHHHHHHHHHHhcCCCCCEEEEecCch-HhHHHHHHHHHhcCCCceEEEEEec
Confidence 44544444577888888888863 35556655555 88888899988754 489999764
No 447
>2wc1_A Flavodoxin; electron transport, flavoprotein; HET: FMN; 2.17A {Rhodobacter capsulatus}
Probab=22.74 E-value=54 Score=24.42 Aligned_cols=36 Identities=19% Similarity=0.272 Sum_probs=21.1
Q ss_pred ceEEEEcCCCCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPD-YKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~-~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++++|||..... ..+.|....+.+-+.|.+.|..++
T Consensus 90 k~~avfg~g~~~~~~~~f~~a~~~l~~~l~~~G~~~v 126 (182)
T 2wc1_A 90 KTIALFGLGDQVTYPLEFVNALFFLHEFFSDRGANVV 126 (182)
T ss_dssp CEEEEEEECCTTTCTTSTTTHHHHHHHHHHTTTCEEE
T ss_pred CEEEEEEeCCCcccchhHHHHHHHHHHHHHHCCCEEE
Confidence 577777765432 112344566666667776776665
No 448
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.71 E-value=2.4e+02 Score=20.99 Aligned_cols=29 Identities=17% Similarity=0.348 Sum_probs=19.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcC--CeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGR--RHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~G--G~viGv 73 (184)
..||+||.. |+=.++++...+.| -.|+.+
T Consensus 5 ~vlItGasg-giG~~la~~l~~~g~~~~V~~~ 35 (250)
T 1yo6_A 5 SVVVTGANR-GIGLGLVQQLVKDKNIRHIIAT 35 (250)
T ss_dssp EEEESSCSS-HHHHHHHHHHHTCTTCCEEEEE
T ss_pred EEEEecCCc-hHHHHHHHHHHhcCCCcEEEEE
Confidence 356777776 77777777777776 566665
No 449
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=22.69 E-value=2.7e+02 Score=22.12 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=33.7
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
|+|.|-|+|+ -.-+++++.|+++|+.|+.-.-. +.......+.++.++.+
T Consensus 3 K~vlVTGas~--------GIG~aia~~la~~Ga~V~~~~~~----~~~~~~~~~~~~~~~~~ 52 (247)
T 3ged_A 3 RGVIVTGGGH--------GIGKQICLDFLEAGDKVCFIDID----EKRSADFAKERPNLFYF 52 (247)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC----HHHHHHHHTTCTTEEEE
T ss_pred CEEEEecCCC--------HHHHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHhcCCEEEE
Confidence 5677778776 36778888899999999865444 33344445556666665
No 450
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=22.68 E-value=51 Score=28.19 Aligned_cols=36 Identities=6% Similarity=0.019 Sum_probs=26.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV 47 (184)
++|+|++|....+.+.=...|+.+.+.|-+.||.++
T Consensus 38 ~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~ 73 (383)
T 3k3p_A 38 ETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVK 73 (383)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEE
Confidence 356666665555555656788888888888888876
No 451
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=22.63 E-value=53 Score=26.62 Aligned_cols=29 Identities=24% Similarity=0.169 Sum_probs=25.6
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.++++...+.|.+|+-.
T Consensus 11 valVTGas~-GIG~aia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 11 TALVTGSAR-GLGFAYAEGLAAAGARVILN 39 (255)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 568899998 99999999999999988765
No 452
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.62 E-value=77 Score=24.92 Aligned_cols=30 Identities=13% Similarity=0.096 Sum_probs=26.2
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGIK-NLGALTAKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCSS-HHHHHHHHHHTTSSCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999998 99999999999999988876
No 453
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=22.60 E-value=1e+02 Score=25.34 Aligned_cols=41 Identities=27% Similarity=0.322 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHCCCe-EEEcCCCcch----hHHHHHHHHhcCCeEEE
Q 044681 30 KAAIDLGNELVSKGLD-LVYGGGNVGL----MGLISEEVHRGRRHVLG 72 (184)
Q Consensus 30 ~~A~~lG~~LA~~G~~-lV~GGg~~Gl----M~a~a~ga~~~GG~viG 72 (184)
+.+.++.+.++++|.. +|..- . |+ |..+.+-|.+.|-+++|
T Consensus 75 ~~~~~~~~ea~~~Gi~~vVi~t-~-G~~~~~~~~l~~~a~~~gi~vig 120 (288)
T 1oi7_A 75 PAAADAALEAAHAGIPLIVLIT-E-GIPTLDMVRAVEEIKALGSRLIG 120 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC-S-CCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEC-C-CCCHHHHHHHHHHHHHcCCEEEe
Confidence 3566777777888888 55433 1 33 44666667776655553
No 454
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.59 E-value=2.6e+02 Score=21.34 Aligned_cols=13 Identities=15% Similarity=-0.067 Sum_probs=9.4
Q ss_pred hCCEEEEecCccc
Q 044681 107 YADCFIVLPGGFG 119 (184)
Q Consensus 107 ~sDa~IvlPGG~G 119 (184)
.-|.+|-..|-..
T Consensus 83 ~id~li~~Ag~~~ 95 (261)
T 3n74_A 83 KVDILVNNAGIGH 95 (261)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 4599998887543
No 455
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=22.57 E-value=89 Score=24.69 Aligned_cols=33 Identities=27% Similarity=0.161 Sum_probs=24.7
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
..-|+|.|-|+++ -..+++++.|+++|+.|+.-
T Consensus 12 ~~~k~vlVTGas~--------GIG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 12 FTDKVAIVTGGSS--------GIGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp TTTCEEEESSTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEE
Confidence 3446788888775 36778888899999998753
No 456
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.54 E-value=86 Score=24.94 Aligned_cols=18 Identities=11% Similarity=0.076 Sum_probs=8.7
Q ss_pred HHHHHHHHHHHCCCeEEE
Q 044681 31 AAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 31 ~A~~lG~~LA~~G~~lV~ 48 (184)
..+++++.|+++|+.|+.
T Consensus 39 IG~aia~~l~~~G~~V~~ 56 (277)
T 4dqx_A 39 IGRATAELFAKNGAYVVV 56 (277)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCEEEE
Confidence 344444455555555443
No 457
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.54 E-value=83 Score=24.62 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=20.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGG 51 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg 51 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 39 (260)
T 1nff_A 8 KVALVSGGAR--------GMGASHVRAMVAEGAKVVFGDI 39 (260)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4666777665 2556666777777777765443
No 458
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=22.49 E-value=87 Score=24.76 Aligned_cols=31 Identities=19% Similarity=0.191 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 23 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 53 (277)
T 2rhc_B 23 EVALVTGATS-GIGLEIARRLGKEGLRVFVCA 53 (277)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4679999998 999999999999998888763
No 459
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=22.46 E-value=63 Score=24.56 Aligned_cols=31 Identities=19% Similarity=0.183 Sum_probs=19.2
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
|++.|-|+++ -..+++++.|+++|+.++.-+
T Consensus 7 k~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~ 37 (223)
T 3uce_A 7 TVYVVLGGTS--------GIGAELAKQLESEHTIVHVAS 37 (223)
T ss_dssp EEEEEETTTS--------HHHHHHHHHHCSTTEEEEEES
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEec
Confidence 4566666654 255666666777777776544
No 460
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.46 E-value=2.9e+02 Score=21.76 Aligned_cols=31 Identities=23% Similarity=0.254 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 28 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~ 58 (277)
T 4dqx_A 28 RVCIVTGGGS-GIGRATAELFAKNGAYVVVAD 58 (277)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 4578999998 999999999999999888763
No 461
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=22.44 E-value=1.4e+02 Score=25.19 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=45.0
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEeec--CChHHHHHHHHH--hCCEEEEecC
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRR-HVLGIIPRALMKKELTG-VTLGEVKPV--DHMHQRKAEMAR--YADCFIVLPG 116 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGviP~~~~~~e~~~-~~~~~~~~~--~~~~~Rk~~m~~--~sDa~IvlPG 116 (184)
...||+|+|+.|++ +.+-|+..|. +|+++-.+.. ..+... -..+.++.. .++.++-.-+.. ..|.++=.-|
T Consensus 215 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 215 DNVVILGGGPIGLA--AVAILKHAGASKVILSEPSEV-RRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCHH-HHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHH-HHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 45788998776665 4555667787 8998853321 111110 011222222 344433333322 3788888888
Q ss_pred cc-ccHHHHHHHH
Q 044681 117 GF-GTLEKLFEVT 128 (184)
Q Consensus 117 G~-GTL~El~~~l 128 (184)
+. .+++.+...+
T Consensus 292 ~~~~~~~~~~~~l 304 (404)
T 3ip1_A 292 VPQLVWPQIEEVI 304 (404)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 77 4677766655
No 462
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=22.43 E-value=76 Score=25.10 Aligned_cols=29 Identities=17% Similarity=0.210 Sum_probs=21.6
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVY 48 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~ 48 (184)
||+|+|+|... ....++..|+++|+.+..
T Consensus 3 ~m~i~iiG~G~---------~G~~~a~~l~~~g~~V~~ 31 (316)
T 2ew2_A 3 AMKIAIAGAGA---------MGSRLGIMLHQGGNDVTL 31 (316)
T ss_dssp -CEEEEECCSH---------HHHHHHHHHHHTTCEEEE
T ss_pred CCeEEEECcCH---------HHHHHHHHHHhCCCcEEE
Confidence 56899999743 556778888999997653
No 463
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=22.42 E-value=1.3e+02 Score=23.08 Aligned_cols=30 Identities=20% Similarity=0.213 Sum_probs=16.9
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYG 49 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~G 49 (184)
++|.|.|+++ -..+++.+.|+++|+.|+.-
T Consensus 13 k~vlVTGasg--------giG~~~a~~l~~~G~~V~~~ 42 (265)
T 2o23_A 13 LVAVITGGAS--------GLGLATAERLVGQGASAVLL 42 (265)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEE
Confidence 4566666554 24555566666666665543
No 464
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.42 E-value=91 Score=23.96 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 10 k~vlITGas~-giG~~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSGG-GIGQAYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEc
Confidence 4578999998 999999999999999888763
No 465
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.37 E-value=66 Score=25.27 Aligned_cols=55 Identities=13% Similarity=0.237 Sum_probs=34.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcC-CeEEEEe
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGR-RHVLGII 74 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~G-G~viGvi 74 (184)
|++.|-|+++ -..+++++.|+++|+.|+.-+...--.+.+.+...+.+ +++..+.
T Consensus 11 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 66 (262)
T 3pk0_A 11 RSVVVTGGTK--------GIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66 (262)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEE
Confidence 5677777665 36778888899999998866554222333333333444 5666663
No 466
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=22.37 E-value=2.2e+02 Score=24.06 Aligned_cols=56 Identities=13% Similarity=0.101 Sum_probs=39.1
Q ss_pred HHHHHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhh
Q 044681 98 HQRKAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDY 160 (184)
Q Consensus 98 ~~Rk~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~ 160 (184)
.+...-+...||+||... =++|.. +.|+++. ++|||. .++-..|++++.+.|.+.
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA~------G~PVV~~~~g~~e~v~~~~~G~lv~~~d~~~la~ai~~l 376 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYP--PLEMAHF------GLRVITNKYENKDLSNWHSNIVSLEQLNPENIAETLVEL 376 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSH--HHHHHHT------TCEEEEECBTTBCGGGTBTTEEEESSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcH--HHHHHhC------CCcEEEeCCCcchhhhcCCCEEEeCCCCHHHHHHHHHHH
Confidence 344556668899998754 366653 5777764 889987 345558999998888765
Q ss_pred c
Q 044681 161 E 161 (184)
Q Consensus 161 ~ 161 (184)
.
T Consensus 377 l 377 (413)
T 2x0d_A 377 C 377 (413)
T ss_dssp H
T ss_pred H
Confidence 3
No 467
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.27 E-value=91 Score=24.07 Aligned_cols=53 Identities=9% Similarity=-0.017 Sum_probs=33.5
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
.++|.|.|+++ -..+++.+.|+++|+.|+.-+... +...+-+.+.+..+..+.
T Consensus 9 ~k~vlITGas~--------gIG~~~a~~l~~~G~~V~~~~r~~---~~~~~~~~~~~~~~~~~~ 61 (261)
T 3n74_A 9 GKVALITGAGS--------GFGEGMAKRFAKGGAKVVIVDRDK---AGAERVAGEIGDAALAVA 61 (261)
T ss_dssp TCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCH---HHHHHHHHHHCTTEEEEE
T ss_pred CCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCCH---HHHHHHHHHhCCceEEEE
Confidence 36788888775 367788888899999988766552 222222234456665553
No 468
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=22.26 E-value=79 Score=24.28 Aligned_cols=30 Identities=17% Similarity=0.100 Sum_probs=16.5
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
++|.|.|+++ -..+++++.|++ |+.++.-+
T Consensus 6 k~vlITGas~--------gIG~~~a~~l~~-g~~v~~~~ 35 (245)
T 3e9n_A 6 KIAVVTGATG--------GMGIEIVKDLSR-DHIVYALG 35 (245)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHTT-TSEEEEEE
T ss_pred CEEEEEcCCC--------HHHHHHHHHHhC-CCeEEEEe
Confidence 4566666654 144555555665 55555433
No 469
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=22.19 E-value=47 Score=28.36 Aligned_cols=43 Identities=12% Similarity=0.215 Sum_probs=22.2
Q ss_pred CCceEE-EEcCCCCCCChH-HHHHHHHHHHHHHH---CCCe--EEEcCCC
Q 044681 10 RFKRVC-VFCGSSPDYKYC-YRKAAIDLGNELVS---KGLD--LVYGGGN 52 (184)
Q Consensus 10 ~~~~I~-Vfggs~~~~~~~-~~~~A~~lG~~LA~---~G~~--lV~GGg~ 52 (184)
.|++|. =|||+....++. ..+..+.+++.|+. .|+. ||.||||
T Consensus 23 ~MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGP 72 (332)
T 4axs_A 23 HMSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGP 72 (332)
T ss_dssp ---CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CcceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 344444 467776665433 23445555555443 5555 4588886
No 470
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=22.17 E-value=69 Score=28.24 Aligned_cols=28 Identities=21% Similarity=0.146 Sum_probs=24.9
Q ss_pred eEEEcCCCcchhHHHHHHHHh-cCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHR-GRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~-~GG~viGv 73 (184)
.|||||+. |+=.|+++...+ .|..|+.+
T Consensus 50 aLVTGas~-GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 50 VLVIGAST-GYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp EEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEeCcch-HHHHHHHHHHHHhcCCEEEEE
Confidence 58999998 999999999988 89998876
No 471
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=22.17 E-value=86 Score=24.47 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 8 KVCLVTGAGG-NIGLATALRLAEEGTAIALLD 38 (262)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999998887763
No 472
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=22.12 E-value=93 Score=23.92 Aligned_cols=31 Identities=16% Similarity=0.144 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...||+||.. |+=.++++...+.|-+|+.+-
T Consensus 13 k~vlVTGasg-giG~~~a~~l~~~G~~V~~~~ 43 (265)
T 2o23_A 13 LVAVITGGAS-GLGLATAERLVGQGASAVLLD 43 (265)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 4678999998 999999999999998888774
No 473
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=22.12 E-value=3e+02 Score=22.31 Aligned_cols=52 Identities=23% Similarity=0.238 Sum_probs=35.1
Q ss_pred HHHHHHhCCEEEEec--CccccHHHHHHHHHHHHhCCCCCCEEE---------------EEEecCCHHHHHHHhhhhc
Q 044681 101 KAEMARYADCFIVLP--GGFGTLEKLFEVTTWSQLGVHNKPVAI---------------IMVSASNAKELVQKLEDYE 161 (184)
Q Consensus 101 k~~m~~~sDa~IvlP--GG~GTL~El~~~l~~~qlg~~~kPvvl---------------~i~~~~~~~e~~~~l~~~~ 161 (184)
..-+...||++|.-. -|+|.- +.|+++. ++|||. .+.+. |++++.+.|.+..
T Consensus 309 ~~~~~~~ad~~v~ps~~E~~~~~--~lEAma~------G~PvI~~~~~g~~e~i~~~~~g~l~~-d~~~la~~i~~ll 377 (416)
T 2x6q_A 309 VNAFQRASDVILQMSIREGFGLT--VTEAMWK------GKPVIGRAVGGIKFQIVDGETGFLVR-DANEAVEVVLYLL 377 (416)
T ss_dssp HHHHHHHCSEEEECCSSCSSCHH--HHHHHHT------TCCEEEESCHHHHHHCCBTTTEEEES-SHHHHHHHHHHHH
T ss_pred HHHHHHhCCEEEECCCcCCCccH--HHHHHHc------CCCEEEccCCCChhheecCCCeEEEC-CHHHHHHHHHHHH
Confidence 445668899986533 244442 5666664 899998 34444 8999999988764
No 474
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=22.10 E-value=59 Score=26.81 Aligned_cols=84 Identities=13% Similarity=0.130 Sum_probs=45.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEeec--CChHHHHHHHHH--hCCEEEEecC
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRR-HVLGIIPRALMKKELTG-VTLGEVKPV--DHMHQRKAEMAR--YADCFIVLPG 116 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG-~viGviP~~~~~~e~~~-~~~~~~~~~--~~~~~Rk~~m~~--~sDa~IvlPG 116 (184)
...+|+|+|+.|++ +.+-|+..|. +|+.+-++.. ..+... -..+..+.. .++.++-.-+.. ..|.++-..|
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLM--SVAGANHLGAGRIFAVGSRKH-CCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHH--HHHHHHTTTCSSEEEECCCHH-HHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCcEEEEECCCHH-HHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 56778987666655 3455666776 7888854321 111110 011222222 344433332222 3678888888
Q ss_pred ccccHHHHHHHHH
Q 044681 117 GFGTLEKLFEVTT 129 (184)
Q Consensus 117 G~GTL~El~~~l~ 129 (184)
+.-++++.+..+.
T Consensus 245 ~~~~~~~~~~~l~ 257 (352)
T 3fpc_A 245 DVHTFAQAVKMIK 257 (352)
T ss_dssp CTTHHHHHHHHEE
T ss_pred ChHHHHHHHHHHh
Confidence 8788888777653
No 475
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=22.09 E-value=1.1e+02 Score=23.90 Aligned_cols=31 Identities=19% Similarity=0.113 Sum_probs=26.2
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 8 KVALVSGGAR-GMGASHVRAMVAEGAKVVFGD 38 (260)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999998888763
No 476
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=22.03 E-value=1.1e+02 Score=23.58 Aligned_cols=33 Identities=12% Similarity=0.152 Sum_probs=25.1
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
|+|.|.|+++ -..+++++.|+++|+.|+.-+..
T Consensus 3 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGGGH--------GIGKQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5778888776 36778888899999998865443
No 477
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=22.01 E-value=80 Score=25.21 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=16.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 31 ~vlVTGas~-gIG~aia~~la~~G~~V~~~ 59 (277)
T 3gvc_A 31 VAIVTGAGA-GIGLAVARRLADEGCHVLCA 59 (277)
T ss_dssp EEEETTTTS-THHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 345556555 55555566555555555544
No 478
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=22.01 E-value=77 Score=26.06 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=28.9
Q ss_pred cCCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 9 SRFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 9 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
..|++|.++.... .-+......|++.|.++||.+..=+.+
T Consensus 18 ~~m~rIl~~~~~~----~GHv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 18 RHMAHLLIVNVAS----HGLILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp -CCCEEEEECCSC----HHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred ccCCEEEEEeCCC----ccccccHHHHHHHHHHCCCEEEEEeCH
Confidence 5678898887642 345567788999999999988765544
No 479
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=21.98 E-value=87 Score=24.56 Aligned_cols=29 Identities=24% Similarity=0.187 Sum_probs=15.9
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 23 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 51 (253)
T 2nm0_A 23 SVLVTGGNR-GIGLAIARAFADAGDKVAIT 51 (253)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345566555 55555555555555555443
No 480
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.97 E-value=1.7e+02 Score=23.07 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=0.0
Q ss_pred ceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCc-chhHHHHHHHH-hcCCeEEEE
Q 044681 12 KRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGNV-GLMGLISEEVH-RGRRHVLGI 73 (184)
Q Consensus 12 ~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~~-GlM~a~a~ga~-~~GG~viGv 73 (184)
|++.|.|+++ -..+++++.|+++|+.|+.-+... --.+.+.+... +.++.+..+
T Consensus 24 k~~lVTGas~--------gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~ 79 (288)
T 2x9g_A 24 PAAVVTGAAK--------RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVC 79 (288)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEE
No 481
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=21.96 E-value=2.9e+02 Score=21.57 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 12 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 42 (281)
T 3svt_A 12 RTYLVTGGGS-GIGKGVAAGLVAAGASVMIVG 42 (281)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999999887763
No 482
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=21.92 E-value=48 Score=25.59 Aligned_cols=71 Identities=13% Similarity=-0.040 Sum_probs=32.8
Q ss_pred HCCCeEEEcCCCcchhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEeecCChHHHH---HHHHHhCCEEEEecCc
Q 044681 41 SKGLDLVYGGGNVGLMGLISEEVHRGRRHVLGIIPRALMKKELTGVTLGEVKPVDHMHQRK---AEMARYADCFIVLPGG 117 (184)
Q Consensus 41 ~~G~~lV~GGg~~GlM~a~a~ga~~~GG~viGviP~~~~~~e~~~~~~~~~~~~~~~~~Rk---~~m~~~sDa~IvlPGG 117 (184)
.+++.+|+|+|..| ..+++...+.|- |+.+-.+...-.+.. .. ...+ ..+..... ..-++.+|++|+.-+.
T Consensus 8 ~~~~viI~G~G~~G--~~la~~L~~~g~-v~vid~~~~~~~~~~-~~-~~~i-~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (234)
T 2aef_A 8 KSRHVVICGWSEST--LECLRELRGSEV-FVLAEDENVRKKVLR-SG-ANFV-HGDPTRVSDLEKANVRGARAVIVDLES 81 (234)
T ss_dssp --CEEEEESCCHHH--HHHHHHSTTSEE-EEEESCGGGHHHHHH-TT-CEEE-ESCTTCHHHHHHTTCTTCSEEEECCSC
T ss_pred CCCEEEEECCChHH--HHHHHHHHhCCe-EEEEECCHHHHHHHh-cC-CeEE-EcCCCCHHHHHhcCcchhcEEEEcCCC
Confidence 35678888887644 344554445554 665532211101111 11 1222 22322222 2225678988887654
No 483
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=21.92 E-value=91 Score=24.79 Aligned_cols=28 Identities=14% Similarity=0.165 Sum_probs=0.0
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 35 ~lVTGas~-GIG~aia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 35 ALITGAST-GIGKKVALAYAEAGAQVAVA 62 (276)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
No 484
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=21.91 E-value=69 Score=25.03 Aligned_cols=30 Identities=13% Similarity=0.196 Sum_probs=26.0
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 8 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 8 VVIITGGSS-GMGKGMATRFAKEGARVVITG 37 (257)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 568999998 999999999999999888763
No 485
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=21.88 E-value=72 Score=25.33 Aligned_cols=31 Identities=26% Similarity=0.382 Sum_probs=26.9
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
-..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 59 (270)
T 3ftp_A 29 QVAIVTGASR-GIGRAIALELARRGAMVIGTA 59 (270)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4678899998 999999999999999988774
No 486
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=21.84 E-value=1.4e+02 Score=25.18 Aligned_cols=41 Identities=12% Similarity=0.012 Sum_probs=0.0
Q ss_pred cccCCceEEEEcCCCCCCC-----------hHHHHHHHHHHHHHHHCCCeEE
Q 044681 7 AKSRFKRVCVFCGSSPDYK-----------YCYRKAAIDLGNELVSKGLDLV 47 (184)
Q Consensus 7 ~~~~~~~I~Vfggs~~~~~-----------~~~~~~A~~lG~~LA~~G~~lV 47 (184)
+++++|+|++++..-.+.. .-....+.+|++.|+++||.+.
T Consensus 3 ~m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~ 54 (499)
T 2r60_A 3 EMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVD 54 (499)
T ss_dssp ----CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEE
T ss_pred cccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEE
No 487
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=21.82 E-value=88 Score=24.64 Aligned_cols=31 Identities=29% Similarity=0.239 Sum_probs=26.7
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 22 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 52 (273)
T 1ae1_A 22 TTALVTGGSK-GIGYAIVEELAGLGARVYTCS 52 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCcc-hHHHHHHHHHHHCCCEEEEEe
Confidence 4578999998 999999999999998888763
No 488
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=21.78 E-value=1.1e+02 Score=23.72 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=26.2
Q ss_pred CeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 44 LDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 44 ~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
..|||||.. |+=.++++...+.|-+|+.+-
T Consensus 9 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 9 VALVTGAAQ-GIGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-cHHHHHHHHHHHCCCEEEEEE
Confidence 578999998 999999999999999888763
No 489
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=21.76 E-value=1.2e+02 Score=22.84 Aligned_cols=65 Identities=9% Similarity=-0.029 Sum_probs=34.3
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHH-HHHCCCeE--EEcCCCcc------------hhHHHHHHHHhcCCeEEEEec
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNE-LVSKGLDL--VYGGGNVG------------LMGLISEEVHRGRRHVLGIIP 75 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~-LA~~G~~l--V~GGg~~G------------lM~a~a~ga~~~GG~viGviP 75 (184)
||+|.|+.+|... ...-.+.|+.+.+. +.+.|+.+ +.= .... -+....+-..++-+.++|. |
T Consensus 2 Mmkilii~gS~r~-~g~t~~la~~i~~~~l~~~g~~v~~~dl-~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~s-P 78 (197)
T 2vzf_A 2 TYSIVAISGSPSR-NSTTAKLAEYALAHVLARSDSQGRHIHV-IDLDPKALLRGDLSNAKLKEAVDATCNADGLIVAT-P 78 (197)
T ss_dssp CEEEEEEECCSST-TCHHHHHHHHHHHHHHHHSSEEEEEEEG-GGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEE-E
T ss_pred CceEEEEECCCCC-CChHHHHHHHHHHHHHHHCCCeEEEEEc-cccCchhhcccccCcHHHHHHHHHHHHCCEEEEEe-C
Confidence 4455555555322 23345688888888 88777543 321 1111 2334444455666766654 6
Q ss_pred Ccc
Q 044681 76 RAL 78 (184)
Q Consensus 76 ~~~ 78 (184)
.+.
T Consensus 79 ~y~ 81 (197)
T 2vzf_A 79 IYK 81 (197)
T ss_dssp CBT
T ss_pred ccC
Confidence 553
No 490
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=21.75 E-value=74 Score=24.66 Aligned_cols=28 Identities=25% Similarity=0.275 Sum_probs=14.8
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||.. |+=.++++...+.|-+|+.+
T Consensus 18 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 45 (247)
T 1uzm_A 18 VLVTGGNR-GIGLAIAQRLAADGHKVAVT 45 (247)
T ss_dssp EEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45555554 55555555555555554443
No 491
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=21.73 E-value=69 Score=24.92 Aligned_cols=28 Identities=7% Similarity=-0.271 Sum_probs=25.1
Q ss_pred eEEEcCCCcchhHHHHHHHHhcCCeEEEE
Q 044681 45 DLVYGGGNVGLMGLISEEVHRGRRHVLGI 73 (184)
Q Consensus 45 ~lV~GGg~~GlM~a~a~ga~~~GG~viGv 73 (184)
.|||||.. |+=.++++...+.|-+|+.+
T Consensus 4 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 4 AIVTNVKH-FGGMGSALRLSEAGHTVACH 31 (254)
T ss_dssp EEESSTTS-TTHHHHHHHHHHTTCEEEEC
T ss_pred EEEeCCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 68999998 99999999999999888876
No 492
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=21.72 E-value=92 Score=25.29 Aligned_cols=43 Identities=28% Similarity=0.294 Sum_probs=26.7
Q ss_pred CCceEEEEcCCCCCCCh--------HHHHHHHHHHHHHHH-------CCCeEEEcCCC
Q 044681 10 RFKRVCVFCGSSPDYKY--------CYRKAAIDLGNELVS-------KGLDLVYGGGN 52 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~--------~~~~~A~~lG~~LA~-------~G~~lV~GGg~ 52 (184)
.|+.|.=+||+....++ ...+.|+++.++... ....||.|||+
T Consensus 6 ~m~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~i~~l~~~G~~~~~~~~vVlVhGGG~ 63 (266)
T 3k4o_A 6 SMLTILKLGGSILSDKNVPYSIKWDNLERIAMEIKNALDYYKNQNKEIKLILVHGGGA 63 (266)
T ss_dssp -CEEEEEECTTSSCCTTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHH
T ss_pred ceEEEEEEchHHeeCCCccCCcCHHHHHHHHHHHHHHHhccccccCCCCEEEEeCchH
Confidence 34566667877765322 456677777654432 45788899955
No 493
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=21.71 E-value=83 Score=22.86 Aligned_cols=37 Identities=16% Similarity=0.115 Sum_probs=24.9
Q ss_pred CCceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 044681 10 RFKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGGGN 52 (184)
Q Consensus 10 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GGg~ 52 (184)
..++|+|+|.|.... +....+.+.|.+.||. ||.=.+
T Consensus 12 ~p~~vaVvGas~~~g-----~~G~~~~~~l~~~G~~-v~~vnp 48 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPS-----RPAHYVPRYLREQGYR-VLPVNP 48 (140)
T ss_dssp HCCEEEEETCCSSTT-----SHHHHHHHHHHHTTCE-EEEECG
T ss_pred CCCEEEEECCCCCCC-----ChHHHHHHHHHHCCCE-EEEeCC
Confidence 356899999876432 2445566668888997 666555
No 494
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=21.64 E-value=1.3e+02 Score=23.59 Aligned_cols=32 Identities=13% Similarity=0.150 Sum_probs=24.7
Q ss_pred CceEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 044681 11 FKRVCVFCGSSPDYKYCYRKAAIDLGNELVSKGLDLVYGG 50 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~LA~~G~~lV~GG 50 (184)
.++|.|.|+++ -..+++.+.|+++|+.|+.-+
T Consensus 21 ~k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~ 52 (253)
T 2nm0_A 21 SRSVLVTGGNR--------GIGLAIARAFADAGDKVAITY 52 (253)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEe
Confidence 36788888876 367788888999999987544
No 495
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=21.58 E-value=1.7e+02 Score=23.16 Aligned_cols=42 Identities=21% Similarity=0.332 Sum_probs=23.4
Q ss_pred CceEEEEcCCCCCCC------h-HHHHHHHHHHHHHHHCCC--eEEEcCCCc
Q 044681 11 FKRVCVFCGSSPDYK------Y-CYRKAAIDLGNELVSKGL--DLVYGGGNV 53 (184)
Q Consensus 11 ~~~I~Vfggs~~~~~------~-~~~~~A~~lG~~LA~~G~--~lV~GGg~~ 53 (184)
.+.|.=||||....+ + ...+.++++.++ .+.|+ .||.|||+.
T Consensus 13 ~~iViKiGGs~l~~~~~~~~~~~~i~~~a~~I~~l-~~~G~~vViV~GgG~~ 63 (255)
T 2jjx_A 13 KRVLIKLSGGALADQTGNSFNSKRLEHIANEILSI-VDLGIEVSIVIGGGNI 63 (255)
T ss_dssp SEEEEEECGGGTSCSSSCSCCHHHHHHHHHHHHHH-HTTTCEEEEEECCTTT
T ss_pred CEEEEEECHHHhCCCCCCCCCHHHHHHHHHHHHHH-HHCCCeEEEEECchHH
Confidence 345666888876532 2 233444444433 23554 688999875
No 496
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=21.57 E-value=1.3e+02 Score=23.08 Aligned_cols=31 Identities=13% Similarity=0.110 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||.. |+=.++++...+.|-+|+.+-
T Consensus 6 k~vlVTGas~-giG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAH-GIGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 3578999998 999999999999998888763
No 497
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=21.50 E-value=79 Score=24.85 Aligned_cols=31 Identities=23% Similarity=0.279 Sum_probs=26.6
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+.
T Consensus 19 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~ 49 (270)
T 3is3_A 19 KVALVTGSGR-GIGAAVAVHLGRLGAKVVVNY 49 (270)
T ss_dssp CEEEESCTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEc
Confidence 4578999998 999999999999999988753
No 498
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=21.46 E-value=92 Score=24.11 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=26.4
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 8 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~ 38 (247)
T 2jah_A 8 KVALITGASS-GIGEATARALAAEGAAVAIAA 38 (247)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 3578999998 999999999999998887763
No 499
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.42 E-value=1.2e+02 Score=23.45 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=26.5
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 8 KLAVITGGAN-GIGRAIAERFAVEGADIAIAD 38 (249)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEc
Confidence 3578999998 999999999999998888763
No 500
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=21.42 E-value=93 Score=25.04 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=27.1
Q ss_pred CCeEEEcCCCcchhHHHHHHHHhcCCeEEEEe
Q 044681 43 GLDLVYGGGNVGLMGLISEEVHRGRRHVLGII 74 (184)
Q Consensus 43 G~~lV~GGg~~GlM~a~a~ga~~~GG~viGvi 74 (184)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 32 k~vlVTGas~-gIG~~la~~l~~~G~~V~~~~ 62 (301)
T 3tjr_A 32 RAAVVTGGAS-GIGLATATEFARRGARLVLSD 62 (301)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 4688999998 999999999999999888774
Done!