Query 044682
Match_columns 755
No_of_seqs 460 out of 3136
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 09:39:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044682.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044682hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-119 1E-123 1044.5 50.3 609 111-752 1-634 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 3E-108 1E-112 956.6 50.4 589 111-753 1-610 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 1.1E-79 3.9E-84 743.8 41.1 524 130-754 8-594 (926)
4 3afg_A Subtilisin-like serine 100.0 9.7E-61 3.3E-65 546.4 36.6 368 22-617 34-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 1.6E-58 5.5E-63 511.5 20.1 346 23-617 2-393 (395)
6 3t41_A Epidermin leader peptid 100.0 3.7E-56 1.3E-60 504.9 28.6 340 67-618 66-467 (471)
7 2p4e_P Proprotein convertase s 100.0 7.4E-57 2.5E-61 516.6 6.9 338 25-582 77-422 (692)
8 1r6v_A Subtilisin-like serine 100.0 6.3E-54 2.2E-58 495.7 26.9 377 22-627 30-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 8E-54 2.7E-58 480.6 25.5 362 130-636 15-436 (441)
10 4h6x_A Thiazoline oxidase/subt 100.0 1.2E-53 4E-58 466.1 9.7 307 130-615 22-337 (357)
11 1dbi_A AK.1 serine protease; h 100.0 1.1E-51 3.9E-56 435.4 22.8 259 129-615 21-279 (280)
12 1gci_A Subtilisin; hydrolase, 100.0 2.1E-51 7.3E-56 430.5 21.9 256 129-615 14-269 (269)
13 1r0r_E Subtilisin carlsberg; h 100.0 1.2E-51 4.2E-56 433.9 19.6 257 129-615 14-274 (274)
14 1to2_E Subtilisin BPN'; serine 100.0 3.4E-51 1.1E-55 432.0 20.4 259 129-616 14-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 1E-50 3.6E-55 428.0 22.6 257 130-615 22-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 2.3E-51 7.9E-56 442.4 17.7 265 129-616 31-311 (327)
17 3zxy_A Subtilisin-like protein 100.0 3.5E-51 1.2E-55 432.9 14.1 267 135-615 3-274 (282)
18 4h6w_A N-terminal cyanobactin 100.0 5.6E-51 1.9E-55 436.7 13.6 272 130-615 12-287 (306)
19 2ixt_A 36KDA protease; serine 100.0 1.8E-49 6.1E-54 425.7 23.6 281 129-610 16-309 (310)
20 2z30_A TK-subtilisin; thermoco 100.0 1.6E-50 5.6E-55 435.1 15.1 265 129-616 18-317 (320)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 4.8E-50 1.6E-54 436.8 15.0 270 130-617 34-330 (347)
22 3lpc_A APRB2; protease, subtil 100.0 4.9E-49 1.7E-53 427.9 19.6 299 129-618 22-339 (340)
23 1wmd_A Protease; alpha-beta hy 100.0 6.7E-49 2.3E-53 440.3 20.2 294 130-618 12-320 (434)
24 1sh7_A Extracellular subtilisi 100.0 7.5E-48 2.6E-52 406.6 22.6 238 129-585 19-259 (284)
25 4dzt_A Aqualysin-1, aqualysin- 100.0 1.8E-47 6.3E-52 403.0 21.5 239 129-586 21-262 (276)
26 2b6n_A Proteinase K; S binding 100.0 2.4E-47 8.3E-52 402.1 21.9 238 129-583 21-261 (278)
27 2oxa_A Extracellular serine pr 100.0 1.3E-47 4.3E-52 446.2 21.6 303 129-622 60-431 (600)
28 3lxu_X Tripeptidyl-peptidase 2 100.0 4.9E-47 1.7E-51 455.2 25.3 344 218-750 267-635 (1354)
29 2pwa_A Proteinase K; structure 100.0 3.3E-47 1.1E-51 400.6 18.4 240 131-610 24-271 (279)
30 1p8j_A Furin precursor; prohor 100.0 8.4E-47 2.9E-51 426.9 20.5 296 129-620 28-334 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 8E-46 2.7E-50 421.6 20.2 288 129-620 44-346 (503)
32 3f7m_A Alkaline serine proteas 100.0 1.3E-45 4.4E-50 389.5 18.2 230 130-583 24-261 (279)
33 2qtw_B Proprotein convertase s 100.0 1.2E-45 4.1E-50 413.4 18.5 279 130-615 17-313 (546)
34 3hjr_A Extracellular serine pr 100.0 7.7E-44 2.6E-48 415.7 27.7 301 129-620 60-429 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 9.7E-26 3.3E-30 257.1 6.0 101 248-357 273-384 (552)
36 1ga6_A Serine-carboxyl protein 99.8 1.7E-21 5.7E-26 211.9 11.3 103 250-357 90-207 (372)
37 2w2n_P Proprotein convertase s 99.0 7.2E-10 2.4E-14 99.3 6.8 78 22-109 36-113 (114)
38 3edy_A Tripeptidyl-peptidase 1 99.0 3.1E-09 1.1E-13 120.3 13.2 101 250-356 262-374 (544)
39 3cnq_P Subtilisin BPN'; unclea 98.8 2.7E-08 9.2E-13 83.2 9.6 73 22-113 7-79 (80)
40 3icu_A E3 ubiquitin-protein li 98.7 1.5E-07 5.1E-12 91.5 13.2 101 379-479 73-187 (194)
41 2qtw_A Proprotein convertase s 98.6 6.1E-08 2.1E-12 87.8 6.8 78 22-109 46-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 98.5 2E-07 7E-12 76.9 8.2 70 24-109 3-75 (76)
43 2z30_B TK-subtilisin; thermoco 97.3 0.00043 1.5E-08 54.9 6.2 45 63-108 19-63 (65)
44 2ek8_A Aminopeptidase; metallo 96.3 0.016 5.4E-07 63.8 10.9 69 398-466 110-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.2 0.077 2.6E-06 58.6 11.0 81 398-478 124-226 (444)
46 3kas_A Transferrin receptor pr 94.7 0.048 1.6E-06 62.8 7.8 68 399-466 128-230 (640)
47 3fed_A Glutamate carboxypeptid 94.6 0.033 1.1E-06 64.9 6.3 70 398-467 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 94.6 0.11 3.7E-06 46.4 8.4 51 673-728 41-91 (122)
49 3qbt_B Inositol polyphosphate 88.2 1.6 5.4E-05 39.8 8.3 54 673-727 43-100 (140)
50 2e6j_A Hydin protein; PAPD, st 87.5 0.59 2E-05 40.6 4.9 54 673-727 26-80 (112)
51 3lxu_X Tripeptidyl-peptidase 2 86.3 0.3 1E-05 60.0 2.9 24 135-158 32-55 (1354)
52 1y9z_A Alkaline serine proteas 83.5 0.61 2.1E-05 51.3 3.6 29 487-523 183-211 (441)
53 2r39_A FIXG-related protein; s 80.0 5.8 0.0002 34.7 8.0 52 674-727 32-83 (118)
54 2kq1_A BH0266 protein; solutio 72.4 1.2 4E-05 39.4 1.3 53 675-727 55-109 (119)
55 3qis_A Inositol polyphosphate 71.2 9.2 0.00032 40.7 8.2 55 673-728 46-104 (366)
56 2qsv_A Uncharacterized protein 63.3 20 0.0007 34.9 8.3 67 673-748 19-85 (220)
57 1m1s_A WR4; structural genomic 63.1 33 0.0011 29.9 8.6 50 675-727 25-74 (116)
58 3zyz_A Beta-D-glucoside glucoh 59.3 28 0.00094 40.5 9.7 55 673-729 613-675 (713)
59 1z9l_A Vesicle-associated memb 58.7 26 0.00089 30.9 7.5 52 673-727 27-78 (128)
60 3idu_A Uncharacterized protein 57.3 42 0.0014 29.7 8.4 52 672-727 32-84 (127)
61 1row_A SSP-19, MSP-domain prot 56.0 41 0.0014 28.9 7.9 49 676-727 18-66 (109)
62 1msp_A MSP, major sperm protei 54.4 33 0.0011 30.2 7.3 51 674-727 26-76 (126)
63 1wic_A Hypothetical protein ri 52.9 31 0.0011 31.6 7.1 51 674-727 36-86 (152)
64 2x41_A Beta-glucosidase; hydro 47.6 35 0.0012 39.7 8.1 70 658-729 595-678 (721)
65 2cri_A Vesicle-associated memb 46.5 36 0.0012 30.9 6.4 52 673-727 31-82 (147)
66 3abz_A Beta-glucosidase I; gly 46.5 41 0.0014 39.8 8.5 67 658-726 715-795 (845)
67 2qsv_A Uncharacterized protein 44.7 82 0.0028 30.5 9.2 52 673-727 134-185 (220)
68 1wgl_A TOLL-interacting protei 34.0 29 0.00098 26.3 2.9 35 546-580 3-37 (59)
69 4ep8_B Urease subunit beta; al 33.8 97 0.0033 26.0 6.3 51 673-724 18-82 (101)
70 1w8o_A Bacterial sialidase; 3D 32.4 79 0.0027 35.5 7.8 62 662-727 363-425 (601)
71 2l04_A Major tail protein V; b 29.8 83 0.0029 26.0 5.4 24 703-727 9-32 (91)
72 3isy_A Bsupi, intracellular pr 29.7 2.8E+02 0.0095 24.1 9.1 55 672-727 17-88 (120)
73 3sd2_A Putative member of DUF3 29.6 2.5E+02 0.0086 23.6 8.3 65 665-746 35-99 (101)
74 4ubp_B Protein (urease (chain 28.9 1.2E+02 0.004 26.6 6.2 51 673-724 24-88 (126)
75 4ac7_B Urease subunit beta; hy 28.9 1.2E+02 0.004 26.6 6.2 51 673-724 24-88 (126)
76 1ni7_A ER75, hypothetical prot 27.6 42 0.0014 30.8 3.5 31 542-573 79-109 (155)
77 3lyw_A YBBR family protein; st 25.7 47 0.0016 27.5 3.1 39 674-712 42-81 (90)
78 3d33_A Domain of unknown funct 25.5 3.1E+02 0.011 23.3 8.6 68 666-747 40-107 (108)
79 3g0m_A Cysteine desulfuration 23.5 40 0.0014 30.4 2.5 33 540-573 70-102 (141)
80 3q48_A Chaperone CUPB2; IG fol 23.0 4.1E+02 0.014 26.3 10.1 52 673-727 42-103 (257)
81 4ay0_A Chaperone protein CAF1M 21.1 4.2E+02 0.014 25.4 9.6 52 673-727 26-84 (218)
82 1yew_A Particulate methane mon 20.4 2.3E+02 0.0078 29.5 7.6 51 673-727 264-336 (382)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.1e-119 Score=1044.51 Aligned_cols=609 Identities=36% Similarity=0.625 Sum_probs=548.2
Q ss_pred cCCCccccCCcccccccccccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCC-CCcccccccccc
Q 044682 111 TTRSWDFLGLEKDNVISQNSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDT-HYGFQCNRKLIG 189 (755)
Q Consensus 111 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~-~~~~~~n~kiig 189 (755)
++++|+|+|++... .+|..+.+|+||+|||||||||++||+|.+.|++|+|.+|+|.|+.+. |+...||+|+++
T Consensus 1 Tt~s~~flgl~~~~-----~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNPSS-----GLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCSSS-----SHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCCch-----hhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 57899999998532 799999999999999999999999999999999999999999999998 999999999999
Q ss_pred eeeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCC
Q 044682 190 MRYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNG 269 (755)
Q Consensus 190 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~ 269 (755)
+++|.+++.... .+...+..+++|..||||||||||||+.+++.+++|++.+.+.||||+|+|++||+|+..+
T Consensus 76 ~~~f~~~~~~~~------~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g- 148 (649)
T 3i6s_A 76 ANYFNKGILAND------PTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG- 148 (649)
T ss_dssp EEECCHHHHHHC------TTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-
T ss_pred eEeccCcccccc------cccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-
Confidence 999998776541 2233456688999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCChhHHHHhhhhhhhCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceE
Q 044682 270 QPLDCRDSDILSAFDDAIHDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLL 349 (755)
Q Consensus 270 ~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vi 349 (755)
|..+++++||+||+++|+||||||||... ..+..+++..++++|.++|++||+||||+|+...++.+.+||+|
T Consensus 149 ----~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~---~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vi 221 (649)
T 3i6s_A 149 ----TFTSDLIAAMDQAVADGVDMISISYGYRF---IPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWIL 221 (649)
T ss_dssp ----ECHHHHHHHHHHHHHTTCSEEEECCCCCS---CCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSE
T ss_pred ----CCHHHHHHHHHHHHHcCCCEEEeCCccCC---cccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceE
Confidence 89999999999999999999999999874 67788999999999999999999999999999999999999999
Q ss_pred EeccccCCceeEEEEEeCCccEEEEE-ee--------cceeecCCCCCCCCCCCCCCCCCc--cceEEEEecCCc-chhh
Q 044682 350 TVGASTMDREFTSYVTLGDEQIFKEI-MQ--------GPLTQHSMIGNLECNPGAIDPKKI--NGKILLCMNHTH-GIDK 417 (755)
Q Consensus 350 tVgA~~~~~~~~~~~~~g~~~~~~g~-l~--------~plv~~~~~~~~~c~~~~~~~~~~--~gkivl~~~~~~-~~~~ 417 (755)
+|||++.|+.|+..+.++|++++.|+ ++ .||+|.. ....|.+..++..++ +||||+|+|+.+ +.+|
T Consensus 222 tVgAst~dr~f~~~~~lgng~~~~g~sl~~~~~~~~~~plv~~~--~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k 299 (649)
T 3i6s_A 222 CVASGHTDRTFAGTLTLGNGLKIRGWSLFPARAFVRDSPVIYNK--TLSDCSSEELLSQVENPENTIVICDDNGDFSDQM 299 (649)
T ss_dssp EEEEEECSCEEEEEEEETTSCEEEEECCCSSCBCEEEEEEECCT--TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHH
T ss_pred EEeeeecccceeeEEEeCCCcEEeeeecccCcccCcceeeEecc--cccccccccccccccccCCcEEEEeCCCccHHHH
Confidence 99999999999999999999999998 54 1788876 467899988888877 999999999999 9999
Q ss_pred HHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCC
Q 044682 418 SQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRG 497 (755)
Q Consensus 418 ~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~G 497 (755)
..+++++|+.|+|++|+. .....+.+.+|+++|+..+++.|++|++++.+++++|.+..+..+..+.+.++.|||||
T Consensus 300 ~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrG 376 (649)
T 3i6s_A 300 RIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARG 376 (649)
T ss_dssp HHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCS
T ss_pred HHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCC
Confidence 999999999999999986 45566778999999999999999999999999999999999999888999999999999
Q ss_pred CCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCC-CCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHH
Q 044682 498 PSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDD-RRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIM 576 (755)
Q Consensus 498 p~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~ 576 (755)
|+...++++||||+|||++|+++|+....++....+. +...|..+||||||||||||+||||||+||+|+|++||++||
T Consensus 377 P~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLm 456 (649)
T 3i6s_A 377 PSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMM 456 (649)
T ss_dssp SCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHH
T ss_pred CCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 9998889999999999999999999865443333232 346899999999999999999999999999999999999999
Q ss_pred hcccccCCCCCCcccCC-CCCCCCCCcCCCCccCccccCCCcccccCCccchhhhhhcCCCCccceecccCCcccc--CC
Q 044682 577 TTATTTDHTGKNPITDY-DGLKATPFEYGAGHVNPNSAMDPGLVYDLSFYDYLSYICSRGYNQSIINNFTTPEIHS--CP 653 (755)
Q Consensus 577 ~TA~~~~~~~~~~~~~~-~~~~~~~~~~G~G~vd~~~Al~~~lvyd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 653 (755)
+||+++++.+ .++.+. .+.++++++||+|+||+.+|++||||||+..+||+.|||++||++++|+.|+.. ++. |+
T Consensus 457 tTA~~~~~~g-~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~-~~~~~C~ 534 (649)
T 3i6s_A 457 TTADPLDNTR-KPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARS-SASHNCS 534 (649)
T ss_dssp HTCBCBCTTS-SBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTT-TSCC-CC
T ss_pred cccccccCCC-CcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecC-CCcCCCC
Confidence 9999999988 888875 466889999999999999999999999999999999999999999999999732 266 98
Q ss_pred CCCCCCCCCCCeEEeec-CCce-----EEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 654 KSFSILDFNYPTIAIPD-LNES-----VTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 654 ~~~~~~~ln~psi~~~~-~~~~-----~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
. ...+||||||++.. +.+. ++|+|||||||+..++|+++++.|.|++|+|+|.+|+|++.+|+++|+|||+.
T Consensus 535 ~--~~~~lNyPs~~~~~~~~~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~ 612 (649)
T 3i6s_A 535 N--PSADLNYPSFIALYSIEGNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSYTLTIRY 612 (649)
T ss_dssp C--CCCCCCCSSEEEEECCSSCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEEEEEEEE
T ss_pred C--chhhcCCCcEEeecccCCCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEEEEEEEe
Confidence 6 46799999999987 5555 89999999999989999999999999999999999999889999999999998
Q ss_pred ccCCCCCCCCCCeEEEEEEEEC--CCC
Q 044682 728 ERNVEPKPKAEKYIFGKLIWSD--SDG 752 (755)
Q Consensus 728 ~~~~~~~~~~~~~~~g~~~~~~--~~~ 752 (755)
..... +.|+||+|+|+| ++|
T Consensus 613 ----~~~~~-~~~~fg~l~w~~~~~~h 634 (649)
T 3i6s_A 613 ----IGDEG-QSRNVGSITWVEQNGNH 634 (649)
T ss_dssp ----CCC----CCCEEEEEEEETTSCC
T ss_pred ----cccCC-CceEEEEEEEEcCCCCe
Confidence 44445 679999999999 554
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=2.8e-108 Score=956.60 Aligned_cols=589 Identities=41% Similarity=0.747 Sum_probs=497.2
Q ss_pred cCCCccccCCcccccccccccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccce
Q 044682 111 TTRSWDFLGLEKDNVISQNSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGM 190 (755)
Q Consensus 111 ~~~s~~~~g~~~~~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~ 190 (755)
++++|+|+|+++ .+|.+..+|+||+|||||||||++||+|++++++|++.+|+|.|+.+. .+.||+|++|+
T Consensus 1 tt~s~~flGl~~-------~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~--~~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFPL-------TVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSN--NFRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCCT-------TCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSS--SCCCCSSEEEE
T ss_pred CCCChhHcCCCc-------cccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCC--CcccCcceeee
Confidence 579999999974 688899999999999999999999999999999999999999999887 55799999999
Q ss_pred eeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCC
Q 044682 191 RYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQ 270 (755)
Q Consensus 191 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~ 270 (755)
++|..+.... ..+..+++|++||||||||||||+.+++.+.+|++.+.++||||+|+|++||+|++.+
T Consensus 72 ~~~~~~~~~~----------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-- 139 (621)
T 3vta_A 72 RSYHIGRPIS----------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-- 139 (621)
T ss_dssp EECCCSSSCC----------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE--
T ss_pred eecccCCccC----------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC--
Confidence 9998764322 2245678999999999999999999988888888888999999999999999999876
Q ss_pred CCCCChhHHHHhhhhhhhCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEE
Q 044682 271 PLDCRDSDILSAFDDAIHDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLT 350 (755)
Q Consensus 271 ~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vit 350 (755)
|..+++++||++|+++|+||||||||+... ..+..+++++++++|.++||+||+||||+|+...++.+.+||+++
T Consensus 140 ---~~~~di~~a~~~a~~~g~dVin~SlG~~~~--~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~ 214 (621)
T 3vta_A 140 ---CSDTDILAAYDDAIADGVDIISLSVGGANP--RHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLS 214 (621)
T ss_dssp ---ECHHHHHHHHHHHHHHTCSEEEECCCCCCG--GGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEE
T ss_pred ---CCHHHHHHHHHHHHHhCCCEEEecCCCCCC--CCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCcee
Confidence 889999999999999999999999998753 556788999999999999999999999999999999999999999
Q ss_pred eccccCCceeEEEEEeCCccEEEEE-ee------cceeecCCCC--------CCCCCCCCCCCCCccceEEEEecCCcch
Q 044682 351 VGASTMDREFTSYVTLGDEQIFKEI-MQ------GPLTQHSMIG--------NLECNPGAIDPKKINGKILLCMNHTHGI 415 (755)
Q Consensus 351 VgA~~~~~~~~~~~~~g~~~~~~g~-l~------~plv~~~~~~--------~~~c~~~~~~~~~~~gkivl~~~~~~~~ 415 (755)
|++++.++.|...+.++++..+.+. +. .++++..... ...|.+..+++.+++|||++|+++..
T Consensus 215 v~ast~d~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~~-- 292 (621)
T 3vta_A 215 VAASTMDRKFVTQVQIGNGQSFQGVSINTFDNQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASFG-- 292 (621)
T ss_dssp EEEECCSEEEEEEEEETTSCEEEEBCCCCSCCEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCCC--
T ss_pred EEEeeccccceeeEEeccCceeeeeecccCCCcccccccccccccccccccccccccccccccccccceEEEEecCCC--
Confidence 9999999999999999999999888 43 1566554432 45699999999999999999987644
Q ss_pred hhHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccC
Q 044682 416 DKSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSS 495 (755)
Q Consensus 416 ~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS 495 (755)
.+..+....|+.++|++++... ..+.+.+|...++..++..++.|+..+..+.+.+....+. .....+.++.|||
T Consensus 293 ~~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSS 367 (621)
T 3vta_A 293 PHEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSS 367 (621)
T ss_dssp HHHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSC
T ss_pred hhHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecC
Confidence 5566777899999999987542 3456789999999999999999999999888888665544 3456789999999
Q ss_pred CCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHH
Q 044682 496 RGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAI 575 (755)
Q Consensus 496 ~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L 575 (755)
|||+...++++||||+|||++|+|+++...... ...+...|..+||||||||||||+||||||+||+|+|++||++|
T Consensus 368 rGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~---~~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaL 444 (621)
T 3vta_A 368 RGPNRATKDVIKPDISGPGVEILAAWPSVAPVG---GIRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSAL 444 (621)
T ss_dssp CCSCTTCTTSCSCCEEEECSSEEEECCSSSCBT---TBCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHH
T ss_pred CCCCCCCCCeeccccccCCcceEeecCcccccc---CcCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHH
Confidence 999988899999999999999999998754322 12344689999999999999999999999999999999999999
Q ss_pred HhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCcccccCCccchhhhhhcCCCCccceeccc-CCccccCCC
Q 044682 576 MTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPGLVYDLSFYDYLSYICSRGYNQSIINNFT-TPEIHSCPK 654 (755)
Q Consensus 576 ~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lvyd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 654 (755)
|+||++++..+ .++.+++||+|+||+.+|++||||||+..+||+.|||+++|++++++.++ .. ..|+.
T Consensus 445 mtTA~~~~~~~---------~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~--~~~~~ 513 (621)
T 3vta_A 445 MTTASPMNARF---------NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDY--SACTS 513 (621)
T ss_dssp HHTCBCCCTTT---------CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC---------------------------
T ss_pred HhcCCcccccC---------CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccc--cccCC
Confidence 99999876554 35678999999999999999999999999999999999999999999997 44 67765
Q ss_pred CC--CCCCCCCCeEEee---cCCceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEecc
Q 044682 655 SF--SILDFNYPTIAIP---DLNESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPER 729 (755)
Q Consensus 655 ~~--~~~~ln~psi~~~---~~~~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 729 (755)
.. ...+||||||++. ++..+++|+|||||||....+|++++++|.|++|+|+|.+|+|++.||+++|+|||+.
T Consensus 514 ~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~-- 591 (621)
T 3vta_A 514 GNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG-- 591 (621)
T ss_dssp ----CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE--
T ss_pred CCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe--
Confidence 43 4679999999985 4457899999999999999999999999999999999999999888999999999987
Q ss_pred CCCCCCCCCCeEEEEEEEECCCCC
Q 044682 730 NVEPKPKAEKYIFGKLIWSDSDGL 753 (755)
Q Consensus 730 ~~~~~~~~~~~~~g~~~~~~~~~~ 753 (755)
. .. +.|+||+|+|+|++|.
T Consensus 592 --~--~~-~~~~~g~l~w~d~~h~ 610 (621)
T 3vta_A 592 --S--IK-GFVVSASLVWSDGVHY 610 (621)
T ss_dssp --C--CC-SSEEEEEEEEECSSCC
T ss_pred --c--CC-CceEEEEEEEEcCCEE
Confidence 2 45 7899999999998763
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=1.1e-79 Score=743.80 Aligned_cols=524 Identities=23% Similarity=0.294 Sum_probs=407.7
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCC-----------CCcccccccccceeeccchhh
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDT-----------HYGFQCNRKLIGMRYYNQGQI 198 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~-----------~~~~~~n~kiig~~~~~~~~~ 198 (755)
.+|.++++|+||+|||||||||++||+|.+ +..|++.|.... ..+..||+|++++++|.++
T Consensus 8 ~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~------~~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~-- 79 (926)
T 1xf1_A 8 TLQEKAGKGAGTVVAVIDAGFDKNHEAWRL------TDKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKD-- 79 (926)
T ss_dssp HHHHHHCSCTTCEEEEEESCCTTCCCCCSC------CSCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCC--
T ss_pred HHHhccCCCCCcEEEEEecCCCCCCHhHcC------CCCCcccccchhhhcccccccCcccccccCcccceeeccccC--
Confidence 899999999999999999999999999985 346766665332 2344799999999998753
Q ss_pred hhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhH
Q 044682 199 EHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSD 278 (755)
Q Consensus 199 ~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~ 278 (755)
. ...|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|++.+. .+..++
T Consensus 80 ---------------~-~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~---~~~~~~ 136 (926)
T 1xf1_A 80 ---------------G-KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGL---ADYARN 136 (926)
T ss_dssp ---------------S-CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCH---HHHHHH
T ss_pred ---------------C-CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCC---CCcHHH
Confidence 1 12288999999999999997554332 245699999999999999987641 145678
Q ss_pred HHHhhhhhhhCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCC-------------CCcccc--
Q 044682 279 ILSAFDDAIHDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPK-------------PDTVVN-- 343 (755)
Q Consensus 279 i~~ai~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~-- 343 (755)
+++||++|+++|+||||||||..... .....+.+..++++|.++||+||+||||+|+. ..++.+
T Consensus 137 i~~Ai~~Ai~~gvdVIn~SlG~~~~~-~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA 215 (926)
T 1xf1_A 137 YAQAIRDAINLGAKVINMSFGNAALA-YANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPA 215 (926)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSCCCT-TCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCT
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCCC-ccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcc
Confidence 99999999999999999999986311 23356678888899999999999999999963 223334
Q ss_pred CCCceEEeccccCCceeEEEEEe-CCccEEEEE-ee----------cceeecCCCCCCCCCCCCCCCCCccceEEEEecC
Q 044682 344 LAPWLLTVGASTMDREFTSYVTL-GDEQIFKEI-MQ----------GPLTQHSMIGNLECNPGAIDPKKINGKILLCMNH 411 (755)
Q Consensus 344 ~~p~vitVgA~~~~~~~~~~~~~-g~~~~~~g~-l~----------~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~ 411 (755)
.+||+|+|||++.++.+...+.+ +++....+. +. .|+++... .|.+..+ .+++||||+|+|+
T Consensus 216 ~~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~----g~~~~~~--~~v~Gkivl~~rg 289 (926)
T 1xf1_A 216 AADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR----GTKEDDF--KDVKGKIALIERG 289 (926)
T ss_dssp TTCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT----SCSTTTT--TTCTTSEEEEECC
T ss_pred cCCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC----CCCccch--hhcCCeEEEEECC
Confidence 37999999999999999988887 555443333 21 16666543 4776655 6999999999999
Q ss_pred Cc-chhhHHHHHHcCccEEEEecCCCCCCCC-CCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCc
Q 044682 412 TH-GIDKSQLAAQAGAAGLILVNPKQLENES-LPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQ 489 (755)
Q Consensus 412 ~~-~~~~~~~~~~~Ga~g~i~~~~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 489 (755)
.| +.+|..+++++|+.|+|++++....... .....++|++.|+..++..|.. ....++++............+.
T Consensus 290 ~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~~~~~~~~ 365 (926)
T 1xf1_A 290 DIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVLPTASGTK 365 (926)
T ss_dssp SSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEEECSSCSB
T ss_pred CCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceecccCCcce
Confidence 99 9999999999999999999986543221 2346789999999999988774 4445555544443355566789
Q ss_pred cccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHH----hhCCC
Q 044682 490 MTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLK----TLHPD 565 (755)
Q Consensus 490 ~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----q~~P~ 565 (755)
++.||||||+. ++++||||+|||++|+++++. +.|..+||||||||||||+||||+ +.||+
T Consensus 366 ~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~-------------~~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~ 430 (926)
T 1xf1_A 366 LSRFSSWGLTA--DGNIKPDIAAPGQDILSSVAN-------------NKYAKLSGTSMSAPLVAGIMGLLQKQYETQYPD 430 (926)
T ss_dssp CCTTSCCCBCT--TSCBSCCEEEECCCEEESSSC-------------SSSCEEESCTTHHHHHHHHHHHHHHHHHHSSSS
T ss_pred eccccCCCCCC--CCccCceEECCCCCEEeeccC-------------CcceecCccchhHHHHHHHHHHHHHHHhccCCC
Confidence 99999999996 899999999999999999976 389999999999999999999996 56999
Q ss_pred CCHHH----HHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCcccccCCccchhhhhhcCCCCccce
Q 044682 566 WSPAA----IKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPGLVYDLSFYDYLSYICSRGYNQSII 641 (755)
Q Consensus 566 ~sp~~----ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lvyd~~~~~~~~~~~~~~~~~~~~ 641 (755)
|+|+| ||++||+||+++...+ ....+++++||+|+||+.+|+++.+ |||..+++..
T Consensus 431 ~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~-- 490 (926)
T 1xf1_A 431 MTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS-- 490 (926)
T ss_dssp SHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS--
T ss_pred CCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc--
Confidence 99997 9999999998875432 1224568899999999999999855 6787654322
Q ss_pred ecccCCccccCCCCCCCCCCCCCeEEeecCCceEEEEEEEEecCCC--CceEEEEEec--CCceEEEEEceeEEEe----
Q 044682 642 NNFTTPEIHSCPKSFSILDFNYPTIAIPDLNESVTITRRVKNVGTH--NSSYEANVEG--VDGVSVVVEPNNLSFT---- 713 (755)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~ln~psi~~~~~~~~~~~~~tv~nv~~~--~~~y~~~~~~--~~g~~v~v~p~~~~~~---- 713 (755)
+|.+.++..+.+++|||+|+|+. ..+|++++.. |.+..++|+|..|.|.
T Consensus 491 -----------------------~i~l~~~~~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~ 547 (926)
T 1xf1_A 491 -----------------------KVHLNNVSDKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQK 547 (926)
T ss_dssp -----------------------CEEEEEECSEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEE
T ss_pred -----------------------eeeccccCccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCe
Confidence 34555555678999999999974 4567777765 6788888888766554
Q ss_pred ---cCCeEEEEEEEEEeccC----CCCCCCCCCeEEEEEEEECCCCCC
Q 044682 714 ---EYGEERTFKVTFTPERN----VEPKPKAEKYIFGKLIWSDSDGLH 754 (755)
Q Consensus 714 ---~~g~~~~~~v~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~ 754 (755)
++||+++|+|||++... ...++. +.|+||+|+|++.++.|
T Consensus 548 vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~-~~~~~G~i~~~~~~~~~ 594 (926)
T 1xf1_A 548 ITIPANSSKQVTVPIDASRFSKDLLAQMKN-GYFLEGFVRFKQDPTKE 594 (926)
T ss_dssp EEECTTEEEEEEEEEECHHHHHHHHHHSTT-CEEEEEEEEEESSTTSC
T ss_pred EEECCCCEEEEEEEEEcCccchhhcccccC-CcEEEEEEEEEeCCCCC
Confidence 45999999999998310 001234 67899999999544433
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=9.7e-61 Score=546.39 Aligned_cols=368 Identities=32% Similarity=0.456 Sum_probs=288.0
Q ss_pred CCceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHH---------
Q 044682 22 AKKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQL--------- 92 (755)
Q Consensus 22 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L--------- 92 (755)
++..|||.|++.... +...++++.+ ..++.++|+ .|+||+++++.+++++|
T Consensus 34 ~~~~~iV~~~~~~~~------------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~ 93 (539)
T 3afg_A 34 QEVSTIIMFDNQADK------------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYF 93 (539)
T ss_dssp CEEEEEEEESSHHHH------------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC--
T ss_pred CceEEEEEECCCCCH------------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhcccccc
Confidence 345699999974321 2222333332 247889997 79999999999999999
Q ss_pred --hCCCCeEEEEeCcccccccCCCccccCCccc-ccccccccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcc
Q 044682 93 --AKHPEVLSIFLDEGRKVQTTRSWDFLGLEKD-NVISQNSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRW 169 (755)
Q Consensus 93 --~~~p~V~~V~~~~~~~~~~~~s~~~~g~~~~-~~~~~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w 169 (755)
+++|+|++|++++.+++.... .++... .+...+.+|..+++|+||+|||||||||++||+|.+
T Consensus 94 ~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~---------- 159 (539)
T 3afg_A 94 GNAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQG---------- 159 (539)
T ss_dssp -CCCCTTEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTT----------
T ss_pred ccccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhC----------
Confidence 899999999999988764321 111110 011123889999999999999999999999999963
Q ss_pred cceeecCCCCcccccccccceeeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcce
Q 044682 170 RGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTA 249 (755)
Q Consensus 170 ~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~ 249 (755)
++++.++|.++ ...+.|++||||||||||||+.... .+.+
T Consensus 160 ----------------~i~~~~d~~~~-----------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~~ 199 (539)
T 3afg_A 160 ----------------KVIGWVDFVNG-----------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGKY 199 (539)
T ss_dssp ----------------TEEEEEETTTC-----------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTTT
T ss_pred ----------------CEeeeEECCCC-----------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCCE
Confidence 35555565532 2356789999999999999985321 2345
Q ss_pred eeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC----CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCc
Q 044682 250 KGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD----GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGI 325 (755)
Q Consensus 250 ~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~----gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi 325 (755)
.||||+|+|+.+|++++.+ .+..+++++||+||+++ |++|||||||... .....+.+..++.++.++|+
T Consensus 200 ~GvAp~A~l~~~kv~~~~g----~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~---~~~~~~~l~~ai~~a~~~Gv 272 (539)
T 3afg_A 200 KGMAPGAKLVGIKVLNGQG----SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQ---SSDGTDSLSQAVNNAWDAGL 272 (539)
T ss_dssp CCSCTTCEEEEEECSCTTS----EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCS---CCCSCSHHHHHHHHHHHTTC
T ss_pred EEECCCCEEEEEEeecCCC----CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCC---CCccchHHHHHHHHHHhcCC
Confidence 8999999999999998776 47789999999999975 9999999999874 23345678888889999999
Q ss_pred EEEEeccCCCCCCCcc--ccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccc
Q 044682 326 LVVAAAGNEGPKPDTV--VNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKING 403 (755)
Q Consensus 326 ~vV~AAGN~G~~~~~~--~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~g 403 (755)
+||+||||+|+...++ +...+++|+|||++.+
T Consensus 273 lvV~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~~---------------------------------------------- 306 (539)
T 3afg_A 273 VVVVAAGNSGPNKYTVGSPAAASKVITVGAVDKY---------------------------------------------- 306 (539)
T ss_dssp EEEEECCSCCSSSSCCCTTTTCSSSEEEEEECTT----------------------------------------------
T ss_pred EEEEECCCCCCCCCcccCCccCCceEEEeeecCC----------------------------------------------
Confidence 9999999999865443 4467899999987642
Q ss_pred eEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecc
Q 044682 404 KILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFN 483 (755)
Q Consensus 404 kivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 483 (755)
T Consensus 307 -------------------------------------------------------------------------------- 306 (539)
T 3afg_A 307 -------------------------------------------------------------------------------- 306 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhC
Q 044682 484 TKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLH 563 (755)
Q Consensus 484 ~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 563 (755)
+.++.||||||+. ++++||||+|||++|+++++..... .+.....|..++|||||||||||++|||+|++
T Consensus 307 ----~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~ 376 (539)
T 3afg_A 307 ----DVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATPHVAGIAALLLQAH 376 (539)
T ss_dssp ----SCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHHHHHHHHHHHHHHC
T ss_pred ----cccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHHHHHHHHHHHHHHC
Confidence 5788999999987 8999999999999999998653210 01112369999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCc
Q 044682 564 PDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPG 617 (755)
Q Consensus 564 P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 617 (755)
|+|+|++||++|++||+++...+ .+++.||+|+||+.+|++..
T Consensus 377 p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 377 PSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp TTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred CCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 99999999999999998765322 24678999999999999954
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=1.6e-58 Score=511.55 Aligned_cols=346 Identities=25% Similarity=0.360 Sum_probs=276.6
Q ss_pred CceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEEE
Q 044682 23 KKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSIF 102 (755)
Q Consensus 23 ~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~ 102 (755)
+.+|||.|++.... .++++. ...++.++|. .|++|+++++++++++|+++|+|++|+
T Consensus 2 ~~~~iV~~~~~~~~---------------~~~~~~-------~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~ 58 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN---------------PHEVLG-------IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVE 58 (395)
T ss_dssp EEEEEEEECTTTCC---------------HHHHHH-------TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEE
T ss_pred cEEEEEEECCCccH---------------HHHHHH-------cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEE
Confidence 56899999986432 122332 2357889998 699999999999999999999999999
Q ss_pred eCcccccccCCCc-----------cccCCcccccccccccccCCCCCCc--eEEEEEccCCCCCCcCccCCCCCCCCCcc
Q 044682 103 LDEGRKVQTTRSW-----------DFLGLEKDNVISQNSAWNKGRFGED--VIIGVIDSGVWPESKSFSDEGMGPVPLRW 169 (755)
Q Consensus 103 ~~~~~~~~~~~s~-----------~~~g~~~~~~~~~~~~~~~~~~G~g--V~VgVIDtGid~~Hp~f~~~g~~~~~~~w 169 (755)
+++.+++.....+ ..|++... ..+.+|..+ +|+| |+|||||||||++||+|.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i---~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~--------- 125 (395)
T 2z2z_A 59 FDHQAVLLGKPSWLGGGSTQPAQTIPWGIERV---KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------- 125 (395)
T ss_dssp ECCEEEECCEECC------CCSCCCCHHHHHT---TCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG---------
T ss_pred EeeeecccCCCCcccccccCccccCCcchhhc---CHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc---------
Confidence 9998876542221 12233222 123789988 9999 99999999999999999742
Q ss_pred cceeecCCCCcccccccccceeeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcce
Q 044682 170 RGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTA 249 (755)
Q Consensus 170 ~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~ 249 (755)
++..++|..+.... +..++.|..||||||||||+|.. ++ ..+
T Consensus 126 -----------------~~~~~~~~~~~~~~------------~~~~~~d~~gHGT~vAgiia~~~-n~--------~g~ 167 (395)
T 2z2z_A 126 -----------------IAWCVSTLRGKVST------------KLRDCADQNGHGTHVIGTIAALN-ND--------IGV 167 (395)
T ss_dssp -----------------EEEEEECGGGCCBC------------CHHHHBCSSSHHHHHHHHHHCCC-SS--------SSC
T ss_pred -----------------cccCccccCCcccC------------CCCCCCCCCCCHHHHHHHHHeec-CC--------Cce
Confidence 33344444321000 01124578999999999999973 21 124
Q ss_pred eeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC--------------------CCcEEEEcCCCCCCCCCCch
Q 044682 250 KGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD--------------------GVDVLSVSLGEPSHKNTEYF 309 (755)
Q Consensus 250 ~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~--------------------gvdVIn~SlG~~~~~~~~~~ 309 (755)
.||||+|+|+.+|++++.+ .++.+++++||+||+++ +++|||||||....
T Consensus 168 ~GvAp~a~l~~~kv~~~~g----~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~------ 237 (395)
T 2z2z_A 168 VGVAPGVQIYSVRVLDARG----SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD------ 237 (395)
T ss_dssp CCSSTTCEEEEEECSCTTS----EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC------
T ss_pred EEECCCCEEEEEEEecCCC----CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC------
Confidence 8999999999999998776 47789999999999988 99999999998742
Q ss_pred hhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCC
Q 044682 310 KDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNL 389 (755)
Q Consensus 310 ~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~ 389 (755)
...+..++.++.++|++||+||||+|......+...|++|+|||++.+
T Consensus 238 ~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~-------------------------------- 285 (395)
T 2z2z_A 238 DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN-------------------------------- 285 (395)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT--------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC--------------------------------
Confidence 244566667888999999999999998777777788999999998643
Q ss_pred CCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCC
Q 044682 390 ECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIK 469 (755)
Q Consensus 390 ~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 469 (755)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchh
Q 044682 470 NPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMST 549 (755)
Q Consensus 470 ~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 549 (755)
+.++.||++|| +|+|||++|+|+++. +.|..++||||||
T Consensus 286 ------------------~~~a~fS~~G~----------~v~APG~~i~s~~~~-------------~~y~~~sGTS~Aa 324 (395)
T 2z2z_A 286 ------------------DNIASFSNRQP----------EVSAPGVDILSTYPD-------------DSYETLMGTAMAT 324 (395)
T ss_dssp ------------------SCBCTTSCSSC----------SEEEECSSEEEEETT-------------TEEEEEESHHHHH
T ss_pred ------------------CCCCcccCCCC----------CEEeCCCCeeeecCC-------------CceEecCCHHHHH
Confidence 57889999998 679999999999976 3799999999999
Q ss_pred hhHHHHHHHHHhhCC-------------CCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCC
Q 044682 550 PHISGIAGLLKTLHP-------------DWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDP 616 (755)
Q Consensus 550 P~VAG~aALl~q~~P-------------~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 616 (755)
|||||++|||+|++| .|++.+||++|++||+++...+ .+..||+|+||+.+|++.
T Consensus 325 P~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g------------~~~~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 325 PHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG------------WDADYGYGVVRAALAVQA 392 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS------------SBTTTBTCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC------------CCCCccCceeCHHHHHHH
Confidence 999999999999999 9999999999999999876544 467899999999999874
Q ss_pred c
Q 044682 617 G 617 (755)
Q Consensus 617 ~ 617 (755)
+
T Consensus 393 a 393 (395)
T 2z2z_A 393 A 393 (395)
T ss_dssp H
T ss_pred H
Confidence 3
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=3.7e-56 Score=504.91 Aligned_cols=340 Identities=19% Similarity=0.237 Sum_probs=265.5
Q ss_pred ccEEEEecceeeeEEEEeCHHHHHHHhC-CCCeEEEEeCcccccccCCCc----------cccCCcccccccccccccCC
Q 044682 67 DSISCSYGRHINGFAAILEEEHAQQLAK-HPEVLSIFLDEGRKVQTTRSW----------DFLGLEKDNVISQNSAWNKG 135 (755)
Q Consensus 67 ~~i~~~y~~~~~g~s~~l~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s~----------~~~g~~~~~~~~~~~~~~~~ 135 (755)
.++.+.|. .|++|+++++++++++|++ +|+|++|++++.+++...... ..|++..... .+.+|..+
T Consensus 66 ~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~--~~~~~~~~ 142 (471)
T 3t41_A 66 LNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITN--NGASYDDL 142 (471)
T ss_dssp CEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTT--TTGGGGGC
T ss_pred CEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccC--cHHHHhcc
Confidence 46788886 6999999999999999999 999999999998877543321 1122222211 12689999
Q ss_pred CCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCCCCCCCC
Q 044682 136 RFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYPTPEHS 215 (755)
Q Consensus 136 ~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~~~~~~ 215 (755)
.+|+||+|||||||||++||+|.+. .|.+. ..++....|.... .....+..
T Consensus 143 ~~G~gv~VaViDtGid~~Hp~~~~~-------~~~~~------------~~~~~~~~~~~~~----------~~~~~~~~ 193 (471)
T 3t41_A 143 PKHANTKIAIIDTGVMKNHDDLKNN-------FSTDS------------KNLVPLNGFRGTE----------PEETGDVH 193 (471)
T ss_dssp CSSCCCCEEEEESCCCTTCTTTTTT-------BCTTC------------EECCCTTCGGGCC----------TTCCCCTT
T ss_pred CCCCCcEEEEEeCCCCCCChhHhcC-------cccCC------------cccccCCCccCCC----------cccCCCCC
Confidence 9999999999999999999999863 11110 0111111111110 01112334
Q ss_pred CCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhCCCcEEE
Q 044682 216 TARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHDGVDVLS 295 (755)
Q Consensus 216 ~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~gvdVIn 295 (755)
.+.|..||||||||||+|+. .+.||||+|+|+.+|++++.. +...++++||++|+++|++|||
T Consensus 194 ~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~-----~~~~~i~~ai~~a~~~g~~Vin 256 (471)
T 3t41_A 194 DVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKK-----TELLWVSKAIVQAANDGNQVIN 256 (471)
T ss_dssp CCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSC-----CCHHHHHHHHHHHHHTTCSEEE
T ss_pred CCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCCC-----CcHHHHHHHHHHHHhCCCCEEE
Confidence 67789999999999999863 248999999999999998743 8899999999999999999999
Q ss_pred EcCCCCCCCC----C------CchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCc------------------cccCCCc
Q 044682 296 VSLGEPSHKN----T------EYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDT------------------VVNLAPW 347 (755)
Q Consensus 296 ~SlG~~~~~~----~------~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~~p~ 347 (755)
||||...... . ....+.+..++..+.++|++||+||||+|..... .+..+++
T Consensus 257 ~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~ 336 (471)
T 3t41_A 257 ISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDN 336 (471)
T ss_dssp ECCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTT
T ss_pred eCCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCC
Confidence 9999741000 0 1345677888888999999999999999976542 4557799
Q ss_pred eEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCcc
Q 044682 348 LLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAA 427 (755)
Q Consensus 348 vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~ 427 (755)
+|+|||++.+
T Consensus 337 vitVgA~~~~---------------------------------------------------------------------- 346 (471)
T 3t41_A 337 VVTVGSTDQK---------------------------------------------------------------------- 346 (471)
T ss_dssp EEEEEEECTT----------------------------------------------------------------------
T ss_pred eEEEEeeCCC----------------------------------------------------------------------
Confidence 9999998653
Q ss_pred EEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCC
Q 044682 428 GLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIK 507 (755)
Q Consensus 428 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~K 507 (755)
+.++.||++||+.
T Consensus 347 ------------------------------------------------------------~~~a~fS~~G~~~------- 359 (471)
T 3t41_A 347 ------------------------------------------------------------SNLSEFSNFGMNY------- 359 (471)
T ss_dssp ------------------------------------------------------------SSBCTTCCBCTTT-------
T ss_pred ------------------------------------------------------------CCCCCccCCCCCC-------
Confidence 5788999999963
Q ss_pred CceeeCCCe----------------------EEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCC-
Q 044682 508 PDITAPGVE----------------------IIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHP- 564 (755)
Q Consensus 508 PDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P- 564 (755)
|||+|||++ |+++++. +.|..++|||||||||||++|||+|++|
T Consensus 360 ~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~-------------~~~~~~sGTS~AaP~VAG~aAll~~~~p~ 426 (471)
T 3t41_A 360 TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANN-------------GRYIYQAGTALATPKVSGALALIIDKYHL 426 (471)
T ss_dssp CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEecCCCcccccccccccccccccccCceeEecCCC-------------CCEEeecchHHHHHHHHHHHHHHHHhccC
Confidence 499999987 8888876 3899999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCcc
Q 044682 565 DWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPGL 618 (755)
Q Consensus 565 ~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~l 618 (755)
.++|.+||++|++||++... .++..||+|+||+.+|++.+.
T Consensus 427 ~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al~~a~ 467 (471)
T 3t41_A 427 EKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKALNVAN 467 (471)
T ss_dssp TTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHTTTTC
T ss_pred CCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHHHHHH
Confidence 89999999999999987643 256789999999999999543
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=7.4e-57 Score=516.59 Aligned_cols=338 Identities=21% Similarity=0.219 Sum_probs=56.8
Q ss_pred eEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEEEeC
Q 044682 25 SYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSIFLD 104 (755)
Q Consensus 25 ~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~ 104 (755)
+|||+||+.... ...+.+.+.+...+.+. ....++.+.|++.|+||+++++++++++|+++|+|++|+++
T Consensus 77 ~YIV~lk~~~~~---------~~~~~~~~~l~a~~~~~-g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd 146 (692)
T 2p4e_P 77 TYVVVLKEETHL---------SQSERTARRLQAQAARR-GYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEED 146 (692)
T ss_dssp EEEEEECTTCCH---------HHHHHHHHHHHHHHHHT-TCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEE
T ss_pred cEEEEECCCCCH---------HHHHHHHHHHHHHHhhc-ccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEec
Confidence 899999987653 22333444443322111 12357899999999999999999999999999999999999
Q ss_pred cccccccCCCccccCCccccccc-ccccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccc
Q 044682 105 EGRKVQTTRSWDFLGLEKDNVIS-QNSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQC 183 (755)
Q Consensus 105 ~~~~~~~~~s~~~~g~~~~~~~~-~~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~ 183 (755)
+.+... ...| ++....+.. ....|..+.+|+||+|+|||||||++||+|.+.-. |.
T Consensus 147 ~~v~~~-~~pW---gL~~i~~~~~~~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~------------- 203 (692)
T 2p4e_P 147 SSVFAQ-SIPW---NLERITPPRYRADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT------------- 203 (692)
T ss_dssp EEEEEC--------------------------------------------------------------------------
T ss_pred cccccC-CCCc---chhhcccccccccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec-------------
Confidence 987642 2234 443322110 11478888999999999999999999999986310 10
Q ss_pred cccccceeeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEe
Q 044682 184 NRKLIGMRYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKS 263 (755)
Q Consensus 184 n~kiig~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv 263 (755)
...+..+.+ |. .....+.|.+||||||||||+|+. .||||+|+|+.+|+
T Consensus 204 ------~~~~~~d~d------g~-----~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKV 252 (692)
T 2p4e_P 204 ------DFENVPEED------GT-----RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRV 252 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------ccccccCCC------CC-----cccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEe
Confidence 000000000 00 001356789999999999999874 79999999999999
Q ss_pred eecCCCCCCCCChhHHHHhhhhhhhC------CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCC
Q 044682 264 CWNVNGQPLDCRDSDILSAFDDAIHD------GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPK 337 (755)
Q Consensus 264 ~~~~~~~~~~~~~~~i~~ai~~a~~~------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~ 337 (755)
+++.+ .++.+++++||+|++++ |++|||||||+.. . ..+..++.++.++|++||+||||+|.+
T Consensus 253 l~~~G----~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~---s----~~l~~Ai~~A~~~GVlvVaAAGN~G~~ 321 (692)
T 2p4e_P 253 LNCQG----KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY---S----RVLNAACQRLARAGVVLVTAAGNFRDD 321 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ecCCC----CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC---c----HHHHHHHHHHHHCCCEEEEECCCCCCC
Confidence 98876 47888999999999986 8999999999753 2 345556668889999999999999976
Q ss_pred CCcc-ccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchh
Q 044682 338 PDTV-VNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGID 416 (755)
Q Consensus 338 ~~~~-~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~ 416 (755)
.... +...|++|+|||++.+...
T Consensus 322 ~~~~sPA~~~~vItVGA~d~~~~~-------------------------------------------------------- 345 (692)
T 2p4e_P 322 ACLYSPASAPEVITVGATNAQDQP-------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCccCcccCCCEEEEEEEcCCCCc--------------------------------------------------------
Confidence 5443 5577999999998754210
Q ss_pred hHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCC
Q 044682 417 KSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSR 496 (755)
Q Consensus 417 ~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~ 496 (755)
...-+.||+|
T Consensus 346 ----------------------------------------------------------------------a~~ss~fSn~ 355 (692)
T 2p4e_P 346 ----------------------------------------------------------------------VTLGTLGTNF 355 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------cccccccCCC
Confidence 0011238999
Q ss_pred CCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHH
Q 044682 497 GPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIM 576 (755)
Q Consensus 497 Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~ 576 (755)
||. |||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+|+|||++|+
T Consensus 356 G~~--------vDI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~ 416 (692)
T 2p4e_P 356 GRC--------VDLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLI 416 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCc--------eeEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 984 599999999999997632 2789999999999999999999999999999999999999
Q ss_pred hccccc
Q 044682 577 TTATTT 582 (755)
Q Consensus 577 ~TA~~~ 582 (755)
+||.+.
T Consensus 417 ~tA~~~ 422 (692)
T 2p4e_P 417 HFSAKD 422 (692)
T ss_dssp ------
T ss_pred Hhcccc
Confidence 999764
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=6.3e-54 Score=495.66 Aligned_cols=377 Identities=19% Similarity=0.218 Sum_probs=273.4
Q ss_pred CCceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCH----HHHHHHh--CC
Q 044682 22 AKKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEE----EHAQQLA--KH 95 (755)
Q Consensus 22 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~----~~~~~L~--~~ 95 (755)
...+|||.|++... .+++++.+ ..++.+.+. .+++++++++. +.+++|+ ++
T Consensus 30 ~~~~~IV~~k~~~~---------------~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~ 86 (671)
T 1r6v_A 30 TEGKILVGYNDRSE---------------VDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALAL 86 (671)
T ss_dssp CTTEEEEEESSHHH---------------HHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCC
T ss_pred CCccEEEEECCCcC---------------HHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccC
Confidence 55799999997421 12222222 246777776 78999999864 3356676 48
Q ss_pred CCeEEEEeCcccccccCC---------------------------CccccCCccccccccccc-ccCCCCCCceEEEEEc
Q 044682 96 PEVLSIFLDEGRKVQTTR---------------------------SWDFLGLEKDNVISQNSA-WNKGRFGEDVIIGVID 147 (755)
Q Consensus 96 p~V~~V~~~~~~~~~~~~---------------------------s~~~~g~~~~~~~~~~~~-~~~~~~G~gV~VgVID 147 (755)
|+|++|+|+..+++.... ....|++... ..+.+ |+. .+|+||+|||||
T Consensus 87 ~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I---~~~~a~w~~-~tG~gV~VAVID 162 (671)
T 1r6v_A 87 KGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAI---GVTQQLWEE-ASGTNIIVAVVD 162 (671)
T ss_dssp SSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHT---TCCHHHHHH-CSCTTCEEEEEE
T ss_pred CCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhcc---CCchhhhhc-cCCCCCEEEEEe
Confidence 999999999776543100 0011222211 12255 888 899999999999
Q ss_pred cCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCCCCCCCCCCCCCCCCchhh
Q 044682 148 SGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYPTPEHSTARDLDGHGTHA 227 (755)
Q Consensus 148 tGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~gHGThV 227 (755)
||||++||+|.+. ++..+.+..+.... ...+..|.+||||||
T Consensus 163 TGVd~~HpdL~~~--------------------------~~~g~~~~~~~~~p------------~~~d~~d~~gHGThV 204 (671)
T 1r6v_A 163 TGVDGTHPDLEGQ--------------------------VIAGYRPAFDEELP------------AGTDSSYGGSAGTHV 204 (671)
T ss_dssp SCCBTTSGGGTTT--------------------------BCCEEEGGGTEEEC------------TTCBCCTTCSHHHHH
T ss_pred CCCCCCCcccccc--------------------------EEecccccCCCcCC------------CCCCCccCCCcchhh
Confidence 9999999999853 11111111110000 012344678999999
Q ss_pred hHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecC----CCCCCCCChhHHHHhhhhhhhCCCcEEEEcCCCCCC
Q 044682 228 ASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNV----NGQPLDCRDSDILSAFDDAIHDGVDVLSVSLGEPSH 303 (755)
Q Consensus 228 Agiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~----~~~~~~~~~~~i~~ai~~a~~~gvdVIn~SlG~~~~ 303 (755)
||||||.. ++ ..+.||||+|+|+.+|+++.. +.+ ......+++||+||+++|++|||||||...
T Consensus 205 AGiIAa~~-ng--------~gv~GVAP~A~I~~vkv~~~~~~~~g~g--~~s~~~i~~ai~~A~~~gadVIN~SlG~~~- 272 (671)
T 1r6v_A 205 AGTIAAKK-DG--------KGIVGVAPGAKIMPIVIFDDPALVGGNG--YVGDDYVAAGIIWATDHGAKVMNHSWGGWG- 272 (671)
T ss_dssp HHHHHCCC-SS--------SSCCCSCTTSEEEEEESBCCHHHHCTTS--BCCHHHHHHHHHHHHHTTCSEEEECEEBSC-
T ss_pred hhhhhccC-CC--------CceEEECCCCEEEEEEeccCccccCCCC--ccCHHHHHHHHHHHHHcCCCEEEeCCCCCC-
Confidence 99999974 21 124899999999999999761 211 245677999999999999999999999763
Q ss_pred CCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC-CccccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceee
Q 044682 304 KNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP-DTVVNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQ 382 (755)
Q Consensus 304 ~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~ 382 (755)
....+..++..|.++|++||+||||+|... ...+...|++|+|||++.+..
T Consensus 273 -----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g~----------------------- 324 (671)
T 1r6v_A 273 -----YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYGG----------------------- 324 (671)
T ss_dssp -----CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEETT-----------------------
T ss_pred -----CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCCC-----------------------
Confidence 134566777789999999999999999764 445567799999999864310
Q ss_pred cCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHH
Q 044682 383 HSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSII 462 (755)
Q Consensus 383 ~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 462 (755)
T Consensus 325 -------------------------------------------------------------------------------- 324 (671)
T 1r6v_A 325 -------------------------------------------------------------------------------- 324 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCC-----CCCCCCCc
Q 044682 463 AYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSK-----SPSDDRRI 537 (755)
Q Consensus 463 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~-----~~~~~~~~ 537 (755)
...++.|||+||.. ||+|||++|+++++....... .......+
T Consensus 325 ------------------------~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g~~~~~~~~~~~~~~ 372 (671)
T 1r6v_A 325 ------------------------TFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIGYEGHNENVPATNGG 372 (671)
T ss_dssp ------------------------EEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTTCCCCCTTCCCSSSC
T ss_pred ------------------------ceeeccccCCCCCe--------eEEecCCCEEeecCCCCccccccccccccccCCC
Confidence 02478999999986 999999999999876321100 00111235
Q ss_pred CCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCc
Q 044682 538 PFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPG 617 (755)
Q Consensus 538 ~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 617 (755)
.|..++|||||||||||++|||+|++|+++|.+||++|++||+++...+ .+..||+|+||+.+|++..
T Consensus 373 ~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~~G~G~vna~~Al~~~ 440 (671)
T 1r6v_A 373 TYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDTGYGLVKLDAALQGP 440 (671)
T ss_dssp CEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTTBTCBCCHHHHHHCC
T ss_pred ceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCCcccceeCHHHHhhhh
Confidence 7999999999999999999999999999999999999999999876554 4578999999999999988
Q ss_pred ccccCCccch
Q 044682 618 LVYDLSFYDY 627 (755)
Q Consensus 618 lvyd~~~~~~ 627 (755)
|.++....+|
T Consensus 441 l~~~~~~~~~ 450 (671)
T 1r6v_A 441 LPTQGGVEEF 450 (671)
T ss_dssp CCSSSEEEEE
T ss_pred cCCCCCccce
Confidence 8777655555
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=8e-54 Score=480.63 Aligned_cols=362 Identities=21% Similarity=0.273 Sum_probs=269.5
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFY 209 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~ 209 (755)
.+|..+ |+||+|||||||||++||+|.+. ++....+...
T Consensus 15 ~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~~------------- 53 (441)
T 1y9z_A 15 VLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSGT------------- 53 (441)
T ss_dssp SSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTTS-------------
T ss_pred hhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCCC-------------
Confidence 788865 77999999999999999999753 1111111110
Q ss_pred CCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCC--eEEEEEeeecCCCCCCCCChhHHHHhhhhhh
Q 044682 210 PTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRA--RLASYKSCWNVNGQPLDCRDSDILSAFDDAI 287 (755)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A--~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~ 287 (755)
.+...+.|..||||||||||+|..++ ..+.||||+| +|+.+|+++..+ .+..+++++||+||+
T Consensus 54 --~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g----~~~~~~~~~ai~~a~ 118 (441)
T 1y9z_A 54 --GNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAG----WGYSSSLVAAIDTCV 118 (441)
T ss_dssp --CCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTE----ECCSSCHHHHHHHHH
T ss_pred --CCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCC----CcCHHHHHHHHHHHH
Confidence 01235678899999999999998521 1248999995 999999998776 478889999999999
Q ss_pred hC-CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEe
Q 044682 288 HD-GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTL 366 (755)
Q Consensus 288 ~~-gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~ 366 (755)
++ |++|||||||.... ...+..++.++.++|++||+||||+|.....++...+++|+|||++.+.....+...
T Consensus 119 ~~~g~~Vin~S~G~~~~------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~ 192 (441)
T 1y9z_A 119 NSGGANVVTMSLGGSGS------TTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQY 192 (441)
T ss_dssp HTTCCSEEEECCCBSCC------BHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCC
T ss_pred HhcCCcEEEeCCCCCCC------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccC
Confidence 99 99999999998742 234556667889999999999999998777777788999999999887643322222
Q ss_pred -------------------CCcc----EEEEE-ee--c--c--------eeecCCC-------CCCCCCCC--CCCCCCc
Q 044682 367 -------------------GDEQ----IFKEI-MQ--G--P--------LTQHSMI-------GNLECNPG--AIDPKKI 401 (755)
Q Consensus 367 -------------------g~~~----~~~g~-l~--~--p--------lv~~~~~-------~~~~c~~~--~~~~~~~ 401 (755)
+++. .+.|+ ++ + | +.|.... ....|... .++..++
T Consensus 193 g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~ 272 (441)
T 1y9z_A 193 TDQVEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNM 272 (441)
T ss_dssp CTTEEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCC
T ss_pred CCceEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccccccchhccccccccccCCCc
Confidence 1221 11111 10 0 0 1111110 12347643 5578899
Q ss_pred cceEEEEecCCc------chhhHHHHHHcCccEEEEecCCCCCCC------CCCCCCcccEEEeeHhhHHHHHHHHhcCC
Q 044682 402 NGKILLCMNHTH------GIDKSQLAAQAGAAGLILVNPKQLENE------SLPLPYHLPTSLVEFDDAQSIIAYNNSIK 469 (755)
Q Consensus 402 ~gkivl~~~~~~------~~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~~ 469 (755)
+|||++|+|+.+ +.+|..+++++|+.|+|++++...... .......+|.+.++..+|+.|++|+...
T Consensus 273 ~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~- 351 (441)
T 1y9z_A 273 ANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS- 351 (441)
T ss_dssp TTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE-
T ss_pred cccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC-
Confidence 999999999763 678999999999999999988542111 1123467999999999999998876321
Q ss_pred CcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchh
Q 044682 470 NPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMST 549 (755)
Q Consensus 470 ~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAa 549 (755)
. .+ ++... ..|..+|||||||
T Consensus 352 ---~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmAa 372 (441)
T 1y9z_A 352 ---T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMAT 372 (441)
T ss_dssp ---E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHHH
T ss_pred ---c-----------------------------------cc--------ccccC-------------CCceeecccccCC
Confidence 0 01 11111 3899999999999
Q ss_pred hhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCCcccccCCccchhh
Q 044682 550 PHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPGLVYDLSFYDYLS 629 (755)
Q Consensus 550 P~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~lvyd~~~~~~~~ 629 (755)
|||||++|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|+ +|+.
T Consensus 373 P~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~ 429 (441)
T 1y9z_A 373 PHVSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAK-----------AYLD 429 (441)
T ss_dssp HHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHH-----------HHHH
T ss_pred cccchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHH-----------HHHH
Confidence 9999999999999999999999999999999887655 4578999999999996 4899
Q ss_pred hhhcCCC
Q 044682 630 YICSRGY 636 (755)
Q Consensus 630 ~~~~~~~ 636 (755)
|||+++.
T Consensus 430 ~lc~~~~ 436 (441)
T 1y9z_A 430 ESCTGPT 436 (441)
T ss_dssp HCTTCC-
T ss_pred hhhcCCC
Confidence 9999875
No 10
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.2e-53 Score=466.08 Aligned_cols=307 Identities=22% Similarity=0.255 Sum_probs=200.5
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccc----cceeeccchhhhhhhccC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKL----IGMRYYNQGQIEHARAQN 205 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~ki----ig~~~~~~~~~~~~~~~g 205 (755)
++|.++..|++|+|||||||||++||+|++....+....|+..++.........+..+ .....+.......
T Consensus 22 ~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 96 (357)
T 4h6x_A 22 DLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAV----- 96 (357)
T ss_dssp HHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHH-----
T ss_pred HHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccc-----
Confidence 8999999999999999999999999999987666666777765543320000000000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCC-CCCCChhHHHHhhh
Q 044682 206 SSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQ-PLDCRDSDILSAFD 284 (755)
Q Consensus 206 ~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~-~~~~~~~~i~~ai~ 284 (755)
..+...+.|.+||||||||||||+.. ..+.||||+|+|+.+|++...... ...+...++++||+
T Consensus 97 -----~~~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~ 161 (357)
T 4h6x_A 97 -----IPDTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAID 161 (357)
T ss_dssp -----CTTTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHH
T ss_pred -----cCCCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHH
Confidence 01223455778999999999999742 234899999999999997543210 00245667899999
Q ss_pred hhhhCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEE
Q 044682 285 DAIHDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYV 364 (755)
Q Consensus 285 ~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~ 364 (755)
+|+++|++|||||||.... .....+.+..++.++.++|++||+||||+|.....++...|++|+|||++.+
T Consensus 162 ~a~~~g~~Vin~S~G~~~~--~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------- 232 (357)
T 4h6x_A 162 LALELGANIIHCAFCRPTQ--TSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD------- 232 (357)
T ss_dssp HHHHTTCSEEEEC-------------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT-------
T ss_pred HHHHcCCCEEeeccccCCc--cccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC-------
Confidence 9999999999999998642 3345567777888999999999999999998777777788999999998653
Q ss_pred EeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCC
Q 044682 365 TLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPL 444 (755)
Q Consensus 365 ~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 444 (755)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCC
Q 044682 445 PYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEA 524 (755)
Q Consensus 445 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 524 (755)
+.++.|||||+.. .||||+|||++|+++++..
T Consensus 233 -------------------------------------------~~~~~fSn~G~~~-----~~~di~APG~~i~s~~~~~ 264 (357)
T 4h6x_A 233 -------------------------------------------GTPCHFSNWGGNN-----TKEGILAPGEEILGAQPCT 264 (357)
T ss_dssp -------------------------------------------SSBCTTCC---CT-----TTTEEEEECSSEEECCTTC
T ss_pred -------------------------------------------CcccccccCCCCC-----CccceeecCCCeEeccCCC
Confidence 5788999999754 5899999999999998763
Q ss_pred CCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCC
Q 044682 525 VAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTL----HPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATP 600 (755)
Q Consensus 525 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~ 600 (755)
..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++... ...+
T Consensus 265 ------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~~----------~~~~ 322 (357)
T 4h6x_A 265 ------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPEV----------VEEP 322 (357)
T ss_dssp ------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC----------------------
T ss_pred ------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCc
Confidence 36778999999999999999999964 568999999999999999875433 2345
Q ss_pred CcCCCCccCccccCC
Q 044682 601 FEYGAGHVNPNSAMD 615 (755)
Q Consensus 601 ~~~G~G~vd~~~Al~ 615 (755)
.+||+|+||+.+|++
T Consensus 323 ~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 323 ERCLRGFVNIPGAMK 337 (357)
T ss_dssp --CTTCBCCHHHHHH
T ss_pred ccceeEEecHHHHHH
Confidence 789999999999987
No 11
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-51 Score=435.37 Aligned_cols=259 Identities=28% Similarity=0.361 Sum_probs=212.5
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|+.+..|+||+|||||||||++||+|.+. ++..++|.++
T Consensus 21 ~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~--------------------------~~~~~~~~~~------------ 62 (280)
T 1dbi_A 21 DYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK--------------------------VIKGYDFVDN------------ 62 (280)
T ss_dssp HHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT--------------------------EEEEEETTTT------------
T ss_pred HHHHhhcCCCCCCEEEEEeCCcCCCChhhccC--------------------------cccceeccCC------------
Confidence 48999998888999999999999999999742 3344444432
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ .+..+++++||+||++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~kv~~~~g----~~~~~~i~~ai~~a~~ 125 (280)
T 1dbi_A 63 -----DYDPMDLNNHGTHVAGIAAAETNNAT--------GIAGMAPNTRILAVRALDRNG----SGTLSDIADAIIYAAD 125 (280)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSSSCEEEEEECCCTTS----CCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHhCcCCCCC--------cceEeCCCCEEEEEEEECCCC----CcCHHHHHHHHHHHHH
Confidence 12456889999999999999864332 248999999999999998776 4788999999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCC
Q 044682 289 DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGD 368 (755)
Q Consensus 289 ~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~ 368 (755)
+|++|||||||.... ...+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 126 ~g~~Vin~S~G~~~~------~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~----------- 188 (280)
T 1dbi_A 126 SGAEVINLSLGCDCH------TTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY----------- 188 (280)
T ss_dssp TTCSEEEECCSSCCC------CHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT-----------
T ss_pred CCCCEEEeCCCCCCC------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC-----------
Confidence 999999999998642 245666777889999999999999998766667788999999998643
Q ss_pred ccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcc
Q 044682 369 EQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHL 448 (755)
Q Consensus 369 ~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~ 448 (755)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCC
Q 044682 449 PTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPS 528 (755)
Q Consensus 449 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 528 (755)
+.++.||++||.. ||+|||++|+++++.
T Consensus 189 ---------------------------------------~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~----- 216 (280)
T 1dbi_A 189 ---------------------------------------DRLASFSNYGTWV--------DVVAPGVDIVSTITG----- 216 (280)
T ss_dssp ---------------------------------------SCBCTTBCCSTTC--------CEEEECSSEEEEETT-----
T ss_pred ---------------------------------------CCcCCCCCCCCCc--------eEEEecCCeEeecCC-----
Confidence 5678999999865 999999999999876
Q ss_pred CCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCcc
Q 044682 529 KSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHV 608 (755)
Q Consensus 529 ~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~v 608 (755)
+.|..++|||||||||||++|||++ |.+++.|||++|++||+++... ...||+|+|
T Consensus 217 --------~~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~--------------~~~~G~G~v 272 (280)
T 1dbi_A 217 --------NRYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT--------------GTYFKYGRI 272 (280)
T ss_dssp --------TEEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB--------------TTTBSSEEC
T ss_pred --------CCEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC--------------CCcccCCEE
Confidence 3799999999999999999999987 8999999999999999887532 257999999
Q ss_pred CccccCC
Q 044682 609 NPNSAMD 615 (755)
Q Consensus 609 d~~~Al~ 615 (755)
|+.+|++
T Consensus 273 n~~~A~~ 279 (280)
T 1dbi_A 273 NSYNAVT 279 (280)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999986
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.1e-51 Score=430.52 Aligned_cols=256 Identities=31% Similarity=0.448 Sum_probs=217.5
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|+|||||| .+||+|+. ...+.|..+
T Consensus 14 ~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~----------------------------~~~~~~~~~------------ 52 (269)
T 1gci_A 14 PAAHNRGLTGSGVKVAVLDTGI-STHPDLNI----------------------------RGGASFVPG------------ 52 (269)
T ss_dssp HHHHHTTCSCTTCEEEEEESCC-CCCTTCCE----------------------------EEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEECCCC-CCCHhhcc----------------------------cCCcccCCC------------
Confidence 3899999999999999999999 89999941 222333321
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
...+.|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++++||+|+++
T Consensus 53 -----~~~~~d~~gHGT~vAgiia~~~-~~--------~~~~GvAp~a~l~~~~v~~~~g----~~~~~~~~~ai~~a~~ 114 (269)
T 1gci_A 53 -----EPSTQDGNGHGTHVAGTIAALN-NS--------IGVLGVAPSAELYAVKVLGASG----SGSVSSIAQGLEWAGN 114 (269)
T ss_dssp -----CCSCSCSSSHHHHHHHHHHCCC-SS--------SBCCCSSTTCEEEEEECBCTTS----CBCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCChHHHHHHHhcCc-CC--------CCcEEeCCCCEEEEEEeECCCC----CcCHHHHHHHHHHHHH
Confidence 1235688999999999999973 11 2248999999999999998766 4778899999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCC
Q 044682 289 DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGD 368 (755)
Q Consensus 289 ~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~ 368 (755)
++++|||||||.... ...+..++.++.++|++||+||||+|......+...+++|+|||++.+
T Consensus 115 ~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~----------- 177 (269)
T 1gci_A 115 NGMHVANLSLGSPSP------SATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN----------- 177 (269)
T ss_dssp TTCSEEEECCCBSSC------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT-----------
T ss_pred CCCeEEEeCCCCCCC------CHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC-----------
Confidence 999999999998742 245666777889999999999999998777777788999999998643
Q ss_pred ccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcc
Q 044682 369 EQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHL 448 (755)
Q Consensus 369 ~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~ 448 (755)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCC
Q 044682 449 PTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPS 528 (755)
Q Consensus 449 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 528 (755)
+.++.||++||.. ||+|||++|+++++.
T Consensus 178 ---------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~----- 205 (269)
T 1gci_A 178 ---------------------------------------NNRASFSQYGAGL--------DIVAPGVNVQSTYPG----- 205 (269)
T ss_dssp ---------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT-----
T ss_pred ---------------------------------------CCCCCCCCCCCCc--------ceEecCCCeEeecCC-----
Confidence 5678999999976 999999999999876
Q ss_pred CCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCcc
Q 044682 529 KSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHV 608 (755)
Q Consensus 529 ~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~v 608 (755)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. ++..||+|+|
T Consensus 206 --------~~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~~~~~G~G~v 262 (269)
T 1gci_A 206 --------STYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------STNLYGSGLV 262 (269)
T ss_dssp --------TEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------CHHHHTTCBC
T ss_pred --------CCEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------CCCCcccCcc
Confidence 37999999999999999999999999999999999999999998763 3468999999
Q ss_pred CccccCC
Q 044682 609 NPNSAMD 615 (755)
Q Consensus 609 d~~~Al~ 615 (755)
|+.+|++
T Consensus 263 n~~~A~~ 269 (269)
T 1gci_A 263 NAEAATR 269 (269)
T ss_dssp CHHHHTC
T ss_pred CHHHHcC
Confidence 9999985
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.2e-51 Score=433.92 Aligned_cols=257 Identities=29% Similarity=0.422 Sum_probs=215.6
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|+|||||||++||+|+. +..+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~------------ 53 (274)
T 1r0r_E 14 DKVQAQGFKGANVKVAVLDTGIQASHPDLNV----------------------------VGGASFVAG------------ 53 (274)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHhHcC----------------------------CCCccccCC------------
Confidence 3899999999999999999999999999941 222333321
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
...+.|..||||||||||+|.. + ...+.||||+|+|+.+|++...+ .+..+++++||+|+++
T Consensus 54 -----~~~~~d~~gHGT~vAgiia~~~-~--------~~g~~GvAp~a~l~~~~v~~~~g----~~~~~~i~~ai~~a~~ 115 (274)
T 1r0r_E 54 -----EAYNTDGNGHGTHVAGTVAALD-N--------TTGVLGVAPSVSLYAVKVLNSSG----SGSYSGIVSGIEWATT 115 (274)
T ss_dssp -----CCTTCCSSSHHHHHHHHHHCCS-S--------SSBCCCSSTTSEEEEEECSCTTS----EECHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCHHHHHHHHHccC-C--------CCceEEECCCCEEEEEEEECCCC----CccHHHHHHHHHHHHH
Confidence 1135678999999999999973 1 12248999999999999998766 4778899999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC----CccccCCCceEEeccccCCceeEEEE
Q 044682 289 DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP----DTVVNLAPWLLTVGASTMDREFTSYV 364 (755)
Q Consensus 289 ~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 364 (755)
++++|||||||.... ...+..++.++.++|++||+||||+|... ...+...|++|+|||++.+
T Consensus 116 ~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------- 182 (274)
T 1r0r_E 116 NGMDVINMSLGGASG------STAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDSN------- 182 (274)
T ss_dssp TTCSEEEECEEBSSC------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECTT-------
T ss_pred cCCCEEEeCCCCCCC------cHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecCC-------
Confidence 999999999998742 34566777788999999999999999763 2344567899999997643
Q ss_pred EeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCC
Q 044682 365 TLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPL 444 (755)
Q Consensus 365 ~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 444 (755)
T Consensus 183 -------------------------------------------------------------------------------- 182 (274)
T 1r0r_E 183 -------------------------------------------------------------------------------- 182 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCC
Q 044682 445 PYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEA 524 (755)
Q Consensus 445 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 524 (755)
+.++.||++||.+ ||+|||++|+++++.
T Consensus 183 -------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~~- 210 (274)
T 1r0r_E 183 -------------------------------------------SNRASFSSVGAEL--------EVMAPGAGVYSTYPT- 210 (274)
T ss_dssp -------------------------------------------SCBCTTCCCSTTE--------EEEEECSSEEEEETT-
T ss_pred -------------------------------------------CCcCccCCCCCCc--------eEEeCCCCeEeecCC-
Confidence 5678999999855 999999999999876
Q ss_pred CCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCC
Q 044682 525 VAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYG 604 (755)
Q Consensus 525 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G 604 (755)
+.|..++|||||||||||++|||+|++|.+++.|||++|++||+++. ++..||
T Consensus 211 ------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G 263 (274)
T 1r0r_E 211 ------------NTYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG---------------SSFYYG 263 (274)
T ss_dssp ------------TEEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------------CHHHHT
T ss_pred ------------CCEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------------CCCCcc
Confidence 37999999999999999999999999999999999999999998763 346899
Q ss_pred CCccCccccCC
Q 044682 605 AGHVNPNSAMD 615 (755)
Q Consensus 605 ~G~vd~~~Al~ 615 (755)
+|+||+.+|++
T Consensus 264 ~G~~~~~~A~~ 274 (274)
T 1r0r_E 264 KGLINVEAAAQ 274 (274)
T ss_dssp TCBCCHHHHTC
T ss_pred cCccCHHHHhC
Confidence 99999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=3.4e-51 Score=432.00 Aligned_cols=259 Identities=32% Similarity=0.444 Sum_probs=216.4
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~------------ 53 (281)
T 1to2_E 14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKV----------------------------AGGASMVPS------------ 53 (281)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECCTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC----------------------------cCCccccCC------------
Confidence 3899999999999999999999999999952 122233221
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
+.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|++...+ .+..++++++|+|+++
T Consensus 54 ----~~~~~~d~~gHGT~vAgiia~~~-~~--------~g~~GvAp~a~l~~~kv~~~~g----~~~~~~i~~ai~~a~~ 116 (281)
T 1to2_E 54 ----ETNPFQDNNSHGTHVAGTVAALN-NS--------IGVLGVAPSASLYAVKVLGADG----SGQYSWIINGIEWAIA 116 (281)
T ss_dssp ----CCCTTCCSSSHHHHHHHHHHCCS-SS--------SSBCCSSTTSEEEEEECSCTTS----EECHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCcHHHHHHHHhccC-CC--------CcceeeCCCCEEEEEEEeCCCC----CccHHHHHHHHHHHHH
Confidence 11123678999999999999973 11 2248999999999999998765 4678899999999999
Q ss_pred CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC----CccccCCCceEEeccccCCceeEEEE
Q 044682 289 DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP----DTVVNLAPWLLTVGASTMDREFTSYV 364 (755)
Q Consensus 289 ~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~----~~~~~~~p~vitVgA~~~~~~~~~~~ 364 (755)
++++|||||||.... ...+..++..+.++|++||+||||+|... ...+...|++|+|||++.+
T Consensus 117 ~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~~------- 183 (281)
T 1to2_E 117 NNMDVINMSLGGPSG------SAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDSS------- 183 (281)
T ss_dssp TTCSEEEECEEBSCC------CHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECTT-------
T ss_pred CCCcEEEECCcCCCC------CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecCC-------
Confidence 999999999998742 34566777788899999999999999763 3345567899999987642
Q ss_pred EeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCC
Q 044682 365 TLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPL 444 (755)
Q Consensus 365 ~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~ 444 (755)
T Consensus 184 -------------------------------------------------------------------------------- 183 (281)
T 1to2_E 184 -------------------------------------------------------------------------------- 183 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCC
Q 044682 445 PYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEA 524 (755)
Q Consensus 445 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 524 (755)
+.++.||++||.. ||+|||++|+++++.
T Consensus 184 -------------------------------------------~~~~~fS~~G~~~--------di~APG~~i~s~~~~- 211 (281)
T 1to2_E 184 -------------------------------------------NQRASFSSVGPEL--------DVMAPGVSIQSTLPG- 211 (281)
T ss_dssp -------------------------------------------SCBCTTCCCSTTC--------CEEEECSSEEEEETT-
T ss_pred -------------------------------------------CCcCCcCCCCCCc--------eEEecCCCeEeecCC-
Confidence 5678999999965 999999999999876
Q ss_pred CCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCC
Q 044682 525 VAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYG 604 (755)
Q Consensus 525 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G 604 (755)
+.|..++|||||||||||++|||+|++|+|++.|||++|++||+++. +++.||
T Consensus 212 ------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G 264 (281)
T 1to2_E 212 ------------NKYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG---------------DSFYYG 264 (281)
T ss_dssp ------------TEEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS---------------CHHHHT
T ss_pred ------------CCEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC---------------CCCCcc
Confidence 37999999999999999999999999999999999999999998763 356899
Q ss_pred CCccCccccCCC
Q 044682 605 AGHVNPNSAMDP 616 (755)
Q Consensus 605 ~G~vd~~~Al~~ 616 (755)
+|+||+.+|+++
T Consensus 265 ~G~v~~~~a~~~ 276 (281)
T 1to2_E 265 KGLINVQAAAQH 276 (281)
T ss_dssp TCBCCHHHHTSS
T ss_pred cceecHHHHhhh
Confidence 999999999985
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1e-50 Score=427.98 Aligned_cols=257 Identities=28% Similarity=0.418 Sum_probs=218.1
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFY 209 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~ 209 (755)
.+|+.. +|+||+|||||||||++||+|.+. ++..++|.++
T Consensus 22 ~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------- 61 (279)
T 1thm_A 22 QAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK--------------------------VVGGWDFVDN------------- 61 (279)
T ss_dssp HHHTTC-CCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEETTTT-------------
T ss_pred HHHhcC-CCCCCEEEEEccCCCCCCcchhcC--------------------------ccccccccCC-------------
Confidence 789887 799999999999999999999742 3444444432
Q ss_pred CCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC
Q 044682 210 PTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD 289 (755)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~ 289 (755)
...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ .++..++++||+||+++
T Consensus 62 ----~~~~~d~~gHGT~vAgiia~~~~n~~--------g~~GvAp~a~l~~~~v~~~~g----~~~~~~~~~ai~~a~~~ 125 (279)
T 1thm_A 62 ----DSTPQNGNGHGTHCAGIAAAVTNNST--------GIAGTAPKASILAVRVLDNSG----SGTWTAVANGITYAADQ 125 (279)
T ss_dssp ----BSCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSTTCEEEEEECSCTTS----CCCHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCcHHHHHHHHhCccCCCC--------ccEEeCCCCEEEEEEeeCCCC----CccHHHHHHHHHHHHHC
Confidence 12456889999999999999864432 248999999999999998776 47888999999999999
Q ss_pred CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCCc
Q 044682 290 GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGDE 369 (755)
Q Consensus 290 gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~~ 369 (755)
|++|||||||.... ...+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 126 g~~Vin~S~G~~~~------~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------ 187 (279)
T 1thm_A 126 GAKVISLSLGGTVG------NSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN------------ 187 (279)
T ss_dssp TCSEEEECCCBSSC------CHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT------------
T ss_pred CCCEEEEecCCCCC------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC------------
Confidence 99999999998742 345666777889999999999999998777777788999999998643
Q ss_pred cEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCccc
Q 044682 370 QIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLP 449 (755)
Q Consensus 370 ~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p 449 (755)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCC
Q 044682 450 TSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSK 529 (755)
Q Consensus 450 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 529 (755)
+.++.||++||.. ||+|||++|+++++.
T Consensus 188 --------------------------------------~~~~~fS~~G~~~--------dv~APG~~i~s~~~~------ 215 (279)
T 1thm_A 188 --------------------------------------DNKSSFSTYGSWV--------DVAAPGSSIYSTYPT------ 215 (279)
T ss_dssp --------------------------------------SCBCTTCCCCTTC--------CEEEECSSEEEEETT------
T ss_pred --------------------------------------CCcCCcCCCCCce--------EEEEcCCCeEEEeCC------
Confidence 5678999999865 999999999999876
Q ss_pred CCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccC
Q 044682 530 SPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVN 609 (755)
Q Consensus 530 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd 609 (755)
+.|..++|||||||||||++||| ++|.+++.+||++|++||+++...+ ..||+|+||
T Consensus 216 -------~~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~--------------~~~G~G~vn 272 (279)
T 1thm_A 216 -------STYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG--------------TYWAKGRVN 272 (279)
T ss_dssp -------TEEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------------TTBSSEECC
T ss_pred -------CCEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------------ccccCCeeC
Confidence 37999999999999999999999 5899999999999999998875433 579999999
Q ss_pred ccccCC
Q 044682 610 PNSAMD 615 (755)
Q Consensus 610 ~~~Al~ 615 (755)
+.+|++
T Consensus 273 ~~~A~~ 278 (279)
T 1thm_A 273 AYKAVQ 278 (279)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=2.3e-51 Score=442.36 Aligned_cols=265 Identities=26% Similarity=0.361 Sum_probs=215.8
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|||||||||++||+|.+ ++++.++|..++...
T Consensus 31 ~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~--------------------------~~~~~~~~~~~~~~~-------- 76 (327)
T 2x8j_A 31 PAVWRASAKGAGQIIGVIDTGCQVDHPDLAE--------------------------RIIGGVNLTTDYGGD-------- 76 (327)
T ss_dssp HHHHHHHGGGTTCEEEEEESCCCTTCTTTGG--------------------------GEEEEEECSSGGGGC--------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCChhHhh--------------------------cccCCccccCCCCCC--------
Confidence 3899999999999999999999999999974 244555565443211
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++++||+||++
T Consensus 77 -----~~~~~d~~gHGT~VAgiia~~~-~~--------~g~~GvAp~a~l~~~kv~~~~g----~~~~~~i~~ai~~a~~ 138 (327)
T 2x8j_A 77 -----ETNFSDNNGHGTHVAGTVAAAE-TG--------SGVVGVAPKADLFIIKALSGDG----SGEMGWIAKAIRYAVD 138 (327)
T ss_dssp -----TTCCCCSSSHHHHHHHHHHCCC-CS--------SBCCCSSTTCEEEEEECSCTTS----EECHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCchHHHHHHHhccC-CC--------CCcEeeCCCCEEEEEEeECCCC----CcCHHHHHHHHHHHHh
Confidence 1245688999999999999984 21 2248999999999999998766 4778899999999999
Q ss_pred ------CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC-----CccccCCCceEEeccccCC
Q 044682 289 ------DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP-----DTVVNLAPWLLTVGASTMD 357 (755)
Q Consensus 289 ------~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~~p~vitVgA~~~~ 357 (755)
.+++|||||||.... ...+..++..+.++|++||+||||+|... ...+...+++|+|||++.+
T Consensus 139 ~~~~~~~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~ 212 (327)
T 2x8j_A 139 WRGPKGEQMRIITMSLGGPTD------SEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD 212 (327)
T ss_dssp CCCTTSCCCSEEEECEEBSCC------CHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT
T ss_pred hcccccCCceEEEECCCcCCC------CHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC
Confidence 899999999998741 24566677788899999999999999652 2344567999999998643
Q ss_pred ceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCC
Q 044682 358 REFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQL 437 (755)
Q Consensus 358 ~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 437 (755)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeE
Q 044682 438 ENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEI 517 (755)
Q Consensus 438 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I 517 (755)
+.++.||++||.+ ||+|||++|
T Consensus 213 --------------------------------------------------~~~~~fS~~G~~~--------di~APG~~i 234 (327)
T 2x8j_A 213 --------------------------------------------------LRLSDFTNTNEEI--------DIVAPGVGI 234 (327)
T ss_dssp --------------------------------------------------CCBSCC---CCCC--------SEEEECSSE
T ss_pred --------------------------------------------------CCCCCccCCCCCc--------eEecCcCce
Confidence 5678999999854 999999999
Q ss_pred EeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhh-----CCCCCHHHHHHHHHhcccccCCCCCCcccC
Q 044682 518 IAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTL-----HPDWSPAAIKSAIMTTATTTDHTGKNPITD 592 (755)
Q Consensus 518 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~ 592 (755)
+++++. +.|..++|||||||||||++|||+|+ +|.+++.+||++|++||+++..
T Consensus 235 ~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~-------- 293 (327)
T 2x8j_A 235 KSTYLD-------------SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF-------- 293 (327)
T ss_dssp EEECST-------------TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS--------
T ss_pred EeecCC-------------CCEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC--------
Confidence 999876 37999999999999999999999999 9999999999999999987642
Q ss_pred CCCCCCCCCcCCCCccCccccCCC
Q 044682 593 YDGLKATPFEYGAGHVNPNSAMDP 616 (755)
Q Consensus 593 ~~~~~~~~~~~G~G~vd~~~Al~~ 616 (755)
++..||+|+||+.+|++.
T Consensus 294 ------~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 294 ------TAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp ------CHHHHTTCEECTTHHHHH
T ss_pred ------CCCceeeeEECHHHHHHh
Confidence 357899999999999883
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.5e-51 Score=432.94 Aligned_cols=267 Identities=22% Similarity=0.249 Sum_probs=211.4
Q ss_pred CCCC-CceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCCCCCC
Q 044682 135 GRFG-EDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYPTPE 213 (755)
Q Consensus 135 ~~~G-~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~~~~ 213 (755)
.++| +||+|||||||||++||+|.+. ++....+... ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---------------~~ 41 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---------------TA 41 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---------------CC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---------------CC
Confidence 3578 6999999999999999999753 1111111110 01
Q ss_pred CCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhCCCcE
Q 044682 214 HSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHDGVDV 293 (755)
Q Consensus 214 ~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~gvdV 293 (755)
.....|.+||||||||||+|+..+ .+.||||+|+|+.+|++.+... .....++++||+||++++++|
T Consensus 42 ~~~d~~~~gHGT~VAGiiag~~~~----------~~~GvAp~a~l~~~kv~~~~~~---~~~~~~i~~ai~~a~~~~~~V 108 (282)
T 3zxy_A 42 ARSDGFMSAHGTHVASIIFGQPET----------SVPGIAPQCRGLIVPIFSDDRR---RITQLDLARGIERAVNAGAHI 108 (282)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCTTS----------SSCCSSTTSEEEEEECSCSSSS---CCCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCCCCCCcccceeehhhccCCc----------eeeeeccccceEeeEeeccccc---cchHHHHHHHHHHhhccCCeE
Confidence 112334678999999999997522 2489999999999999866542 367888999999999999999
Q ss_pred EEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCCccEEE
Q 044682 294 LSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGDEQIFK 373 (755)
Q Consensus 294 In~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~ 373 (755)
||||||.... .......+..++..+.++|+++|+||||+|......+...|++|+|||++.+
T Consensus 109 in~S~G~~~~--~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~---------------- 170 (282)
T 3zxy_A 109 INISGGELTD--FGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH---------------- 170 (282)
T ss_dssp EEECCCEEES--SSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT----------------
T ss_pred EeccCccccc--cccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC----------------
Confidence 9999997531 2233455667777899999999999999998777777788999999997643
Q ss_pred EEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCcccEEEe
Q 044682 374 EIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLPTSLV 453 (755)
Q Consensus 374 g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i 453 (755)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCCCCCC
Q 044682 454 EFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSKSPSD 533 (755)
Q Consensus 454 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~ 533 (755)
+.++.||+||+. ..||||+|||++|+++++.
T Consensus 171 ----------------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~s~~~~---------- 201 (282)
T 3zxy_A 171 ----------------------------------GHPLDFSNWGST-----YEQQGILAPGEDILGAKPG---------- 201 (282)
T ss_dssp ----------------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEEEECTT----------
T ss_pred ----------------------------------CccccccCCCCC-----ccccceeccCcceeeecCC----------
Confidence 567889999975 3688999999999999876
Q ss_pred CCCcCCeeeccccchhhhHHHHHHHHHhhC----CCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccC
Q 044682 534 DRRIPFNACFGTSMSTPHISGIAGLLKTLH----PDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVN 609 (755)
Q Consensus 534 ~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd 609 (755)
+.|..++|||||||||||++|||+|++ |.++|+|||++|++||++++... +.....+|+|+||
T Consensus 202 ---~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~~----------~~~~~~~G~G~ln 268 (282)
T 3zxy_A 202 ---GGTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDDA----------PEQARRCLAGRLN 268 (282)
T ss_dssp ---SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCC
T ss_pred ---CceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCCC----------CCccCceeeeEeC
Confidence 379999999999999999999999875 78999999999999998875432 2345689999999
Q ss_pred ccccCC
Q 044682 610 PNSAMD 615 (755)
Q Consensus 610 ~~~Al~ 615 (755)
+.+|++
T Consensus 269 ~~~A~~ 274 (282)
T 3zxy_A 269 VSGAFT 274 (282)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999987
No 18
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=5.6e-51 Score=436.75 Aligned_cols=272 Identities=25% Similarity=0.312 Sum_probs=219.3
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFY 209 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~ 209 (755)
++|+.+..++||+|||||||||++||+|.+. .+.+..++..+
T Consensus 12 ~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-------------------------~~~~~~~~~~~------------- 53 (306)
T 4h6w_A 12 KLWSETRGDPKICVAVLDGIVDQNHPCFIGA-------------------------DLTRLPSLVSG------------- 53 (306)
T ss_dssp HHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-------------------------EEEECC------------------
T ss_pred HHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-------------------------cccCCCcccCC-------------
Confidence 8999988789999999999999999999753 11122222221
Q ss_pred CCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC
Q 044682 210 PTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD 289 (755)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~ 289 (755)
+.....|..||||||||||+|+.. +.+.||||+|+|+.+|++.+... .+...++++||+||+++
T Consensus 54 ---~~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~---~~~~~~i~~ai~~a~~~ 117 (306)
T 4h6w_A 54 ---EANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESL---KLSQLDLSRAIEQAVNN 117 (306)
T ss_dssp --------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSC---CCCHHHHHHHHHHHHHT
T ss_pred ---CCCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccc---cchHHHHHHHHHHhhcc
Confidence 112344678999999999999742 23489999999999999876542 36788899999999999
Q ss_pred CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCCceEEeccccCCceeEEEEEeCCc
Q 044682 290 GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAPWLLTVGASTMDREFTSYVTLGDE 369 (755)
Q Consensus 290 gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p~vitVgA~~~~~~~~~~~~~g~~ 369 (755)
+++|||+|||.... .......+..++..+.++|++||++|||+|......+...+++|+|||++..
T Consensus 118 g~~vi~~s~g~~~~--~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~------------ 183 (306)
T 4h6w_A 118 GANIINVSAGQLTD--AGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ------------ 183 (306)
T ss_dssp TCSEEEECCCEEES--SSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT------------
T ss_pred cceeeecccccccc--CCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC------------
Confidence 99999999997532 2234456777778899999999999999998777777788999999998643
Q ss_pred cEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCccc
Q 044682 370 QIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYHLP 449 (755)
Q Consensus 370 ~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p 449 (755)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCCCC
Q 044682 450 TSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAPSK 529 (755)
Q Consensus 450 ~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~ 529 (755)
+.+++||++|+.. .||||+|||++|+++++.
T Consensus 184 --------------------------------------~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~------ 214 (306)
T 4h6w_A 184 --------------------------------------GKPVDFSNWGDAY-----QKQGILAPGKDILGAKPN------ 214 (306)
T ss_dssp --------------------------------------SCBCSSSCBCHHH-----HHHEEEEECSSEEEECTT------
T ss_pred --------------------------------------CCccccccccCCc-----CcceeecCCcCcccccCC------
Confidence 4677899999643 688999999999999876
Q ss_pred CCCCCCCcCCeeeccccchhhhHHHHHHHHHhh----CCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcCCC
Q 044682 530 SPSDDRRIPFNACFGTSMSTPHISGIAGLLKTL----HPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEYGA 605 (755)
Q Consensus 530 ~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~ 605 (755)
+.|..++|||||||||||++|||+++ +|.++|+|||++|++||++++..+ ......||+
T Consensus 215 -------~~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~----------~~~~~~~G~ 277 (306)
T 4h6w_A 215 -------GGTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD----------TDDQSRCLM 277 (306)
T ss_dssp -------SCEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT----------CSCGGGGTT
T ss_pred -------CceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC----------CCCCCCcce
Confidence 38999999999999999999999864 699999999999999999886554 223457999
Q ss_pred CccCccccCC
Q 044682 606 GHVNPNSAMD 615 (755)
Q Consensus 606 G~vd~~~Al~ 615 (755)
|+||+.+|++
T Consensus 278 G~ln~~~Av~ 287 (306)
T 4h6w_A 278 GKLNILDAIE 287 (306)
T ss_dssp CBCCHHHHHH
T ss_pred eecCHHHHHH
Confidence 9999999998
No 19
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.8e-49 Score=425.67 Aligned_cols=281 Identities=26% Similarity=0.357 Sum_probs=221.9
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|||||||||++||+|.+. +...++|......
T Consensus 16 ~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~--------------------------~~~~~~~~~~~~~--------- 60 (310)
T 2ixt_A 16 NDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN--------------------------VEQCKDFTGATTP--------- 60 (310)
T ss_dssp CTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEESSSSSSC---------
T ss_pred hhhhhccCCCCCcEEEEEecCCCCCCHHHhhc--------------------------ccccccccCCCCC---------
Confidence 38999999999999999999999999999752 3333444432100
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
+.....|..||||||||||+|.... ....+.||||+|+|+.+|++.+.+ .+..+++++||+|+++
T Consensus 61 ----~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g----~~~~~~~~~ai~~a~~ 125 (310)
T 2ixt_A 61 ----INNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSG----SGYSDDIAAAIRHAAD 125 (310)
T ss_dssp ----EETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTS----CCCHHHHHHHHHHHHH
T ss_pred ----CCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCC----CCcHHHHHHHHHHHHH
Confidence 1124568899999999999998521 112358999999999999998776 4788999999999999
Q ss_pred CCC-----cEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC--CccccCCCceEEeccccCCceeE
Q 044682 289 DGV-----DVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP--DTVVNLAPWLLTVGASTMDREFT 361 (755)
Q Consensus 289 ~gv-----dVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~--~~~~~~~p~vitVgA~~~~~~~~ 361 (755)
+++ +|||||||.... ...+..++.++.++|++||+||||+|... ...+...|++|+|||++....
T Consensus 126 ~~~~~~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~-- 197 (310)
T 2ixt_A 126 QATATGTKTIISMSLGSSAN------NSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ-- 197 (310)
T ss_dssp HHHHHTCCEEEEECCCBSSC------CHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE--
T ss_pred hhhccCCCeEEEEcCCCCCC------CHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc--
Confidence 988 999999998742 34566677788999999999999999763 334556799999999763100
Q ss_pred EEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCC
Q 044682 362 SYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENES 441 (755)
Q Consensus 362 ~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~ 441 (755)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCC--ccccccCCCCCCCC----CCCCCCceeeCCC
Q 044682 442 LPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSP--QMTFFSSRGPSTIN----PNIIKPDITAPGV 515 (755)
Q Consensus 442 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSS~Gp~~~~----~~~~KPDI~APG~ 515 (755)
.+ .++.||++||.... ..+.||||+|||+
T Consensus 198 ---------------------------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~ 232 (310)
T 2ixt_A 198 ---------------------------------------------NGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGS 232 (310)
T ss_dssp ---------------------------------------------TTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECS
T ss_pred ---------------------------------------------CCCeeeccccCCCCccCCccccccCCCeeEECCCC
Confidence 12 67889999995421 1235999999999
Q ss_pred eEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCC
Q 044682 516 EIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDG 595 (755)
Q Consensus 516 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~ 595 (755)
+|+++++. +.|..++|||||||||||++|||+|++|.+++.+||++|++||++.+..+ ....
T Consensus 233 ~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~-----~~~a 294 (310)
T 2ixt_A 233 SVYSTWYN-------------GGYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKG-----GYGA 294 (310)
T ss_dssp SEEEECTT-------------SSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCB-----STTC
T ss_pred CEeeecCC-------------CCEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCC-----Cccc
Confidence 99999876 37999999999999999999999999999999999999999999876432 1112
Q ss_pred CCCCCCcCCCCccCc
Q 044682 596 LKATPFEYGAGHVNP 610 (755)
Q Consensus 596 ~~~~~~~~G~G~vd~ 610 (755)
...++..+|||++|+
T Consensus 295 ~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 295 AIGDDYASGFGFARV 309 (310)
T ss_dssp CSSSBTTTBTCBCCC
T ss_pred ccCCccccccceeec
Confidence 345778999999986
No 20
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=1.6e-50 Score=435.11 Aligned_cols=265 Identities=28% Similarity=0.424 Sum_probs=218.6
Q ss_pred cccccCCCCCC--ceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCC
Q 044682 129 NSAWNKGRFGE--DVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNS 206 (755)
Q Consensus 129 ~~~~~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~ 206 (755)
+.+|+.+ +|+ ||+|||||||||++||+|.+. ++...+|..+....
T Consensus 18 ~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~~~~------ 64 (320)
T 2z30_A 18 PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------------------IAWCVSTLRGKVST------ 64 (320)
T ss_dssp GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG--------------------------EEEEEECGGGCCBC------
T ss_pred HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc--------------------------cccCccccCCccCC------
Confidence 3899988 999 999999999999999999742 33333443321000
Q ss_pred CCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhh
Q 044682 207 SFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDA 286 (755)
Q Consensus 207 ~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a 286 (755)
+.....|..||||||||||+|.. ++ ..+.||||+|+|+.+|+++..+ .+..+++++||+||
T Consensus 65 ------~~~~~~d~~gHGT~vAgiia~~~-n~--------~g~~GvAp~a~l~~~~v~~~~g----~~~~~~i~~ai~~a 125 (320)
T 2z30_A 65 ------KLRDCADQNGHGTHVIGTIAALN-ND--------IGVVGVAPGVQIYSVRVLDARG----SGSYSDIAIGIEQA 125 (320)
T ss_dssp ------CHHHHBCSSSHHHHHHHHHHCCS-SS--------BSCCCSSTTCEEEEEECSCTTS----EEEHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCCHHHHHHHHHccc-CC--------CceEeeCCCCEEEEEEeeCCCC----CccHHHHHHHHHHH
Confidence 01123578999999999999973 11 2248999999999999998766 47788999999999
Q ss_pred hhC--------------------CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCccccCCC
Q 044682 287 IHD--------------------GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTVVNLAP 346 (755)
Q Consensus 287 ~~~--------------------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~~~~~p 346 (755)
+++ +++|||||||.... ...+..++.++.++|++||+||||+|.....++...|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~ 199 (320)
T 2z30_A 126 ILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD------DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYP 199 (320)
T ss_dssp HHTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSCC------CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTST
T ss_pred HhCcccccccccccccccccccCCceEEEecCCCCCC------CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCC
Confidence 987 99999999998742 3445566678889999999999999987777777889
Q ss_pred ceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCc
Q 044682 347 WLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGA 426 (755)
Q Consensus 347 ~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga 426 (755)
++|+|||++.+
T Consensus 200 ~vi~Vga~~~~--------------------------------------------------------------------- 210 (320)
T 2z30_A 200 EVIAVGAIDSN--------------------------------------------------------------------- 210 (320)
T ss_dssp TEEEEEEECTT---------------------------------------------------------------------
T ss_pred CeEEEEeeCCC---------------------------------------------------------------------
Confidence 99999998643
Q ss_pred cEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCC
Q 044682 427 AGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNII 506 (755)
Q Consensus 427 ~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~ 506 (755)
+.++.||++||
T Consensus 211 -------------------------------------------------------------~~~~~~S~~g~-------- 221 (320)
T 2z30_A 211 -------------------------------------------------------------DNIASFSNRQP-------- 221 (320)
T ss_dssp -------------------------------------------------------------SCBCTTSCSSC--------
T ss_pred -------------------------------------------------------------CCcCcccCCCC--------
Confidence 56789999997
Q ss_pred CCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhC-------------CCCCHHHHHH
Q 044682 507 KPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLH-------------PDWSPAAIKS 573 (755)
Q Consensus 507 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~-------------P~~sp~~ik~ 573 (755)
+|+|||++|+++++. +.|..++|||||||||||++|||+|++ |.+++.+||+
T Consensus 222 --~v~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~ 286 (320)
T 2z30_A 222 --EVSAPGVDILSTYPD-------------DSYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRG 286 (320)
T ss_dssp --SEEEECSSEEEEETT-------------TEEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHH
T ss_pred --CEEeCCCCeEEeccC-------------CCeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHH
Confidence 789999999999876 379999999999999999999999999 9999999999
Q ss_pred HHHhcccccCCCCCCcccCCCCCCCCCCcCCCCccCccccCCC
Q 044682 574 AIMTTATTTDHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDP 616 (755)
Q Consensus 574 ~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~ 616 (755)
+|++||+++...+ .+..||+|+||+.+|++.
T Consensus 287 ~L~~ta~~~~~~g------------~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 287 ILHITADDLGPTG------------WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp HHHHHSBCCSSSS------------SBTTTBTCBCCHHHHHHH
T ss_pred HHHhhCccCCCCC------------CCCCcCCceeCHHHHHHH
Confidence 9999999875544 467899999999999874
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=4.8e-50 Score=436.82 Aligned_cols=270 Identities=20% Similarity=0.149 Sum_probs=216.7
Q ss_pred ccccCCCCCC--ceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCC
Q 044682 130 SAWNKGRFGE--DVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSS 207 (755)
Q Consensus 130 ~~~~~~~~G~--gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~ 207 (755)
.+|+. .+|+ ||+||||||||| +||+|.+. ++..++|.++ +.
T Consensus 34 ~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~--------------------------~~~~~~~~~~--------~~- 76 (347)
T 2iy9_A 34 ETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS--------------------------EFAKFSFTQD--------GS- 76 (347)
T ss_dssp HHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC--------------------------EEEEEECBTT--------CC-
T ss_pred HHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC--------------------------cccCCcccCC--------CC-
Confidence 78988 8999 999999999999 99999742 3334444432 00
Q ss_pred CCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhh
Q 044682 208 FYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAI 287 (755)
Q Consensus 208 ~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~ 287 (755)
......+.|..||||||||||+|+ .| +.||||+|+|+.+|++.+.+ .. ++++||+||+
T Consensus 77 ---~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~-----~~--~~~~ai~~a~ 134 (347)
T 2iy9_A 77 ---PFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGV-----QD--SWIRAIESIM 134 (347)
T ss_dssp ---SSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBC-----TT--HHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCC-----HH--HHHHHHHHHH
Confidence 001124567889999999999997 12 38999999999999997654 22 9999999999
Q ss_pred hC------CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCC-------CccccCCC--------
Q 044682 288 HD------GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKP-------DTVVNLAP-------- 346 (755)
Q Consensus 288 ~~------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~-------~~~~~~~p-------- 346 (755)
++ |++|||||||... .......+..++..+.++|++||+||||+|... ...+...+
T Consensus 135 ~~~~~~~~~~~Vin~S~G~~~---~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~ 211 (347)
T 2iy9_A 135 SNVFLAPGEEKIINISGGQKG---VASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKK 211 (347)
T ss_dssp TCTTSCTTEEEEEEESSCBCC---C-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHH
T ss_pred hhhhcccCCceEEEeccccCC---CCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccc
Confidence 99 9999999999764 223456777788889999999999999999753 34455667
Q ss_pred --ceEEeccccC--CceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHH
Q 044682 347 --WLLTVGASTM--DREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAA 422 (755)
Q Consensus 347 --~vitVgA~~~--~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~ 422 (755)
++|+|||++. +....
T Consensus 212 ~~~vi~Vga~~~~~~g~~~------------------------------------------------------------- 230 (347)
T 2iy9_A 212 QDPVIRVAALAQYRKGETP------------------------------------------------------------- 230 (347)
T ss_dssp TCCEEEEEEECCCCTTSCC-------------------------------------------------------------
T ss_pred cCCEEEEEEcccCCCCcee-------------------------------------------------------------
Confidence 9999999875 32100
Q ss_pred HcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCC
Q 044682 423 QAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTIN 502 (755)
Q Consensus 423 ~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~ 502 (755)
...+.++.||++||+
T Consensus 231 --------------------------------------------------------------~~~~~~~~fS~~G~~--- 245 (347)
T 2iy9_A 231 --------------------------------------------------------------VLHGGGITGSRFGNN--- 245 (347)
T ss_dssp --------------------------------------------------------------CBCCCSSSCBCBCTT---
T ss_pred --------------------------------------------------------------cccCCCCCCCCCCCC---
Confidence 001345699999994
Q ss_pred CCCCCCceeeCCCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccccc
Q 044682 503 PNIIKPDITAPGVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTT 582 (755)
Q Consensus 503 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~ 582 (755)
||||+|||++|+++++. +.|..++|||||||||||++|||+|++|++++.|||++|++||+++
T Consensus 246 ----~~di~APG~~i~s~~~~-------------~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 308 (347)
T 2iy9_A 246 ----WVDIAAPGQNITFLRPD-------------AKTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKY 308 (347)
T ss_dssp ----TCSEEEECSSEEEECTT-------------SCEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEEC
T ss_pred ----CCEEEeCCCCeEeecCC-------------CCeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 67999999999999976 3799999999999999999999999999999999999999999987
Q ss_pred CCCCCCcccCCCCCCCCCCcCCCCccCccccCCCc
Q 044682 583 DHTGKNPITDYDGLKATPFEYGAGHVNPNSAMDPG 617 (755)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~G~G~vd~~~Al~~~ 617 (755)
...+ ...+|+|+||+.+|++..
T Consensus 309 ~~~~-------------~~~~G~G~ld~~~A~~~~ 330 (347)
T 2iy9_A 309 PSLV-------------DKVTEGRVLNAEKAISMF 330 (347)
T ss_dssp GGGT-------------TTSGGGEECCHHHHHHHH
T ss_pred CCCC-------------CccccCCEecHHHHHHHH
Confidence 6543 368999999999999843
No 22
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=4.9e-49 Score=427.85 Aligned_cols=299 Identities=23% Similarity=0.304 Sum_probs=219.9
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCC-CCcccccccc---cceeeccchhhhhhhcc
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDT-HYGFQCNRKL---IGMRYYNQGQIEHARAQ 204 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~-~~~~~~n~ki---ig~~~~~~~~~~~~~~~ 204 (755)
+.+|+.+++|+||+||||||||+ +||+|.+.- +.+...... ......+.+. .....+.+.+...
T Consensus 22 ~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~-------~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~---- 89 (340)
T 3lpc_A 22 DKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANV-------LPGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG---- 89 (340)
T ss_dssp HHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGB-------CCCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS----
T ss_pred HHHHHhcCCCCCeEEEEEcCCCC-CChhhhccc-------ccCccccCCccccccCCCccCCcccccccccccccc----
Confidence 38999999999999999999998 999997531 111110000 0000000000 0000000000000
Q ss_pred CCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhh
Q 044682 205 NSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFD 284 (755)
Q Consensus 205 g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~ 284 (755)
....+.....|..||||||||||+|...++.+ +.||||+|+|+.+|++...+ +...+++++|+
T Consensus 90 ----~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~g--------~~GvAp~a~l~~~~v~~~~~-----~~~~~~~~ai~ 152 (340)
T 3lpc_A 90 ----GRPDPRKERSDSSWHGSHVAGTIAAVTNNRIG--------VAGVAYGAKVVPVRALGRCG-----GYDSDISDGLY 152 (340)
T ss_dssp ----CTTCGGGSCBCCCCHHHHHHHHHHCCCSSSSS--------CCCTTTTSEEEEEECCBTTB-----CCHHHHHHHHH
T ss_pred ----CCCCcccCCCCCCCCHHHHHHHHHccCCCCCc--------ceeecCCCEEEEEEEecCCC-----CcHHHHHHHHH
Confidence 00011224568899999999999998654332 48999999999999998765 78899999999
Q ss_pred hhhh----------CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCC-ccccCCCceEEecc
Q 044682 285 DAIH----------DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPD-TVVNLAPWLLTVGA 353 (755)
Q Consensus 285 ~a~~----------~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA 353 (755)
||++ .+++|||||||... .....+..++.++.++|++||+||||+|.... ..+...+++|+|||
T Consensus 153 ~a~~~~~~~~~~~~~~~~Vin~S~G~~~-----~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga 227 (340)
T 3lpc_A 153 WAAGGRIAGIPENRNPAKVINMSLGSDG-----QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGA 227 (340)
T ss_dssp HHHTCCCTTSCCCSSCCSEEEECCCEES-----CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEE
T ss_pred HHhcccccccccccCCCeEEEeCcCCCC-----CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEec
Confidence 9998 89999999999753 12334566677888999999999999997654 34557799999999
Q ss_pred ccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEec
Q 044682 354 STMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVN 433 (755)
Q Consensus 354 ~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~ 433 (755)
++.+
T Consensus 228 ~~~~---------------------------------------------------------------------------- 231 (340)
T 3lpc_A 228 TTSR---------------------------------------------------------------------------- 231 (340)
T ss_dssp ECTT----------------------------------------------------------------------------
T ss_pred CCCC----------------------------------------------------------------------------
Confidence 7643
Q ss_pred CCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeC
Q 044682 434 PKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAP 513 (755)
Q Consensus 434 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~AP 513 (755)
+.++.||++|| ||||+||
T Consensus 232 ------------------------------------------------------~~~~~~S~~g~--------~~di~Ap 249 (340)
T 3lpc_A 232 ------------------------------------------------------GIRASFSNYGV--------DVDLAAP 249 (340)
T ss_dssp ------------------------------------------------------SSBCTTCCBST--------TCCEEEE
T ss_pred ------------------------------------------------------CCcCCCCCCCC--------CceEEec
Confidence 57789999998 4599999
Q ss_pred CCeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhh-C---CCCCHHHHHHHHHhcccccCCCCCCc
Q 044682 514 GVEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTL-H---PDWSPAAIKSAIMTTATTTDHTGKNP 589 (755)
Q Consensus 514 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---P~~sp~~ik~~L~~TA~~~~~~~~~~ 589 (755)
|++|+++++..... .....|..++|||||||||||++|||+|+ + |.+++++||++|++||+++...
T Consensus 250 G~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~~---- 319 (340)
T 3lpc_A 250 GQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNGR---- 319 (340)
T ss_dssp CSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSSC----
T ss_pred CCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCCC----
Confidence 99999998864321 11235999999999999999999999998 5 9999999999999999886422
Q ss_pred ccCCCCCCCCCCcCCCCccCccccCCCcc
Q 044682 590 ITDYDGLKATPFEYGAGHVNPNSAMDPGL 618 (755)
Q Consensus 590 ~~~~~~~~~~~~~~G~G~vd~~~Al~~~l 618 (755)
++..||+|+||+.+||+..|
T Consensus 320 ---------~~~~~G~G~vd~~~Av~~~l 339 (340)
T 3lpc_A 320 ---------LDRALGSGIVDAEAAVNSVL 339 (340)
T ss_dssp ---------CSSCCCSSBCCHHHHHHHHH
T ss_pred ---------CCCCcccceecHHHHHHHHh
Confidence 35689999999999987543
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=6.7e-49 Score=440.26 Aligned_cols=294 Identities=27% Similarity=0.345 Sum_probs=222.7
Q ss_pred cccc-CCCCCCceEEEEEccCCCC------CCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhh
Q 044682 130 SAWN-KGRFGEDVIIGVIDSGVWP------ESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHAR 202 (755)
Q Consensus 130 ~~~~-~~~~G~gV~VgVIDtGid~------~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~ 202 (755)
.+|+ .+++|+||+|||||||||+ .||+|.+. ++..+.|.+
T Consensus 12 ~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~--------------------------i~~~~~~~~------- 58 (434)
T 1wmd_A 12 VAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK--------------------------ITALYALGR------- 58 (434)
T ss_dssp HHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC--------------------------EEEEEETTT-------
T ss_pred hhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC--------------------------EeeeccccC-------
Confidence 8897 7999999999999999999 79999742 333333322
Q ss_pred ccCCCCCCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHh
Q 044682 203 AQNSSFYPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSA 282 (755)
Q Consensus 203 ~~g~~~~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~a 282 (755)
...+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+.. .....++.++
T Consensus 59 -----------~~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~--~~~~~~~~~a 114 (434)
T 1wmd_A 59 -----------TNNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGL--GGLPSNLQTL 114 (434)
T ss_dssp -----------TTCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSC--TTSCSSHHHH
T ss_pred -----------CCCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCcc--ccccHHHHHH
Confidence 12556889999999999998641 14799999999999999776521 1245789999
Q ss_pred hhhhhhCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHH-HhcCcEEEEeccCCCCCCCc--cccCCCceEEeccccCCce
Q 044682 283 FDDAIHDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHA-MMHGILVVAAAGNEGPKPDT--VVNLAPWLLTVGASTMDRE 359 (755)
Q Consensus 283 i~~a~~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a-~~~Gi~vV~AAGN~G~~~~~--~~~~~p~vitVgA~~~~~~ 359 (755)
|++++++|++|||||||.... ..+ +....++..+ .++|++||+||||+|....+ .+..++++|+|||++..+.
T Consensus 115 i~~a~~~g~~Vin~S~G~~~~--~~~--~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~ 190 (434)
T 1wmd_A 115 FSQAYSAGARIHTNSWGAAVN--GAY--TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRP 190 (434)
T ss_dssp HHHHHHTTCSEEEECCCBCCT--TCC--CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCG
T ss_pred HHHHHhcCCeEEEecCCCCcC--CcC--CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCc
Confidence 999999999999999998741 111 2233344344 68999999999999976543 3446799999999875320
Q ss_pred eEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCC
Q 044682 360 FTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLEN 439 (755)
Q Consensus 360 ~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~ 439 (755)
.. |
T Consensus 191 ~~---------------------------------------------------------------~-------------- 193 (434)
T 1wmd_A 191 SF---------------------------------------------------------------G-------------- 193 (434)
T ss_dssp GG---------------------------------------------------------------C--------------
T ss_pred cc---------------------------------------------------------------C--------------
Confidence 00 0
Q ss_pred CCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEe
Q 044682 440 ESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIA 519 (755)
Q Consensus 440 ~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~s 519 (755)
......+.++.|||+||+. ++++||||+|||++|++
T Consensus 194 ------------------------------------------~~~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s 229 (434)
T 1wmd_A 194 ------------------------------------------SYADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILS 229 (434)
T ss_dssp ------------------------------------------GGGSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEE
T ss_pred ------------------------------------------cccCCCCccccccCCCCCC--CCCCCceEEcCCCCeEe
Confidence 0001136889999999997 89999999999999999
Q ss_pred eecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCC-----CHHHHHHHHHhcccccCCCCCCcccCCC
Q 044682 520 AYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDW-----SPAAIKSAIMTTATTTDHTGKNPITDYD 594 (755)
Q Consensus 520 a~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~-----sp~~ik~~L~~TA~~~~~~~~~~~~~~~ 594 (755)
+++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||+++...
T Consensus 230 ~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~~--------- 299 (434)
T 1wmd_A 230 ARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGLG--------- 299 (434)
T ss_dssp ECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSSC---------
T ss_pred cCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCCC---------
Confidence 98642110000 00012479999999999999999999999999876 8999999999999875322
Q ss_pred CCCCCCCcCCCCccCccccCCCcc
Q 044682 595 GLKATPFEYGAGHVNPNSAMDPGL 618 (755)
Q Consensus 595 ~~~~~~~~~G~G~vd~~~Al~~~l 618 (755)
.++..||||++|+.+|++..+
T Consensus 300 ---~~~~~~G~G~vd~~~a~~~~~ 320 (434)
T 1wmd_A 300 ---YPNGNQGWGRVTLDKSLNVAY 320 (434)
T ss_dssp ---SSCTTTTTCBCCHHHHHTCEE
T ss_pred ---CCCccCCcCeEeHHHhcccce
Confidence 367899999999999997653
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=7.5e-48 Score=406.58 Aligned_cols=238 Identities=26% Similarity=0.349 Sum_probs=201.8
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|||||||||++||+|.+. ++..++|.++
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------ 60 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR--------------------------SVSGYDFVDN------------ 60 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC--------------------------EEEEEETTTT------------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC--------------------------ccccccccCC------------
Confidence 47899999999999999999999999999742 3333344332
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
...+.|..||||||||||+|+. .||||+|+|+.+|++++.+ .+..+++++||+|+++
T Consensus 61 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g----~~~~~~~~~ai~~a~~ 117 (284)
T 1sh7_A 61 -----DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSG----SGTTSGVISGVDWVAQ 117 (284)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTS----CBCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCC----CcCHHHHHHHHHHHHh
Confidence 1245688999999999999874 6999999999999998776 4788999999999998
Q ss_pred C--CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCC-ccccCCCceEEeccccCCceeEEEEE
Q 044682 289 D--GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPD-TVVNLAPWLLTVGASTMDREFTSYVT 365 (755)
Q Consensus 289 ~--gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~~p~vitVgA~~~~~~~~~~~~ 365 (755)
+ +++|||||||... ...+..++.++.++|++||+||||+|.... ..+...|++|+|||++.+
T Consensus 118 ~~~~~~Vin~S~G~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------- 182 (284)
T 1sh7_A 118 NASGPSVANMSLGGGQ-------STALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS-------- 182 (284)
T ss_dssp HCCSSEEEEECCCBSC-------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT--------
T ss_pred CCCCCcEEEeCCCCCC-------CHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC--------
Confidence 4 7999999999863 245666677888999999999999997543 345567999999997643
Q ss_pred eCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCC
Q 044682 366 LGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLP 445 (755)
Q Consensus 366 ~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 445 (755)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCC
Q 044682 446 YHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAV 525 (755)
Q Consensus 446 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~ 525 (755)
+.++.||++||.. ||+|||++|+++++.
T Consensus 183 ------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~-- 210 (284)
T 1sh7_A 183 ------------------------------------------DSRSSFSNWGSCV--------DLFAPGSQIKSAWYD-- 210 (284)
T ss_dssp ------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTT--
T ss_pred ------------------------------------------CCcCcccCCCCcc--------EEEeccCCeEEecCC--
Confidence 5678999999976 999999999999876
Q ss_pred CCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCC
Q 044682 526 APSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHT 585 (755)
Q Consensus 526 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~ 585 (755)
+.|..++|||||||||||++|||+|++|+++++|||++|++||++....
T Consensus 211 -----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~ 259 (284)
T 1sh7_A 211 -----------GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENKVS 259 (284)
T ss_dssp -----------SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCB
T ss_pred -----------CCEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCcc
Confidence 3799999999999999999999999999999999999999999886543
No 25
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=1.8e-47 Score=403.02 Aligned_cols=239 Identities=27% Similarity=0.338 Sum_probs=203.2
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
..+|..+.+|+||+|||||||||++||+|.+. +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------- 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR--------------------------ARVGYDALG------------- 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTS-------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC--------------------------eeccccCCC-------------
Confidence 37899999999999999999999999999742 222223322
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
..+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+...+++++++|+++
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~----~~~~~~~~~ai~~~~~ 117 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNG----SGSTSGVIAGVDWVTR 117 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS----CCCHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCC----CcCHHHHHHHHHHHHh
Confidence 245678999999999999874 7999999999999998776 4788999999999998
Q ss_pred C--CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCcc-ccCCCceEEeccccCCceeEEEEE
Q 044682 289 D--GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTV-VNLAPWLLTVGASTMDREFTSYVT 365 (755)
Q Consensus 289 ~--gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgA~~~~~~~~~~~~ 365 (755)
+ +++|||||||... ...+..++..+.++|+++|+||||+|...... +...+++|+|||++.+
T Consensus 118 ~~~~~~vin~S~g~~~-------~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------- 182 (276)
T 4dzt_A 118 NHRRPAVANMSLGGGV-------STALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTSS-------- 182 (276)
T ss_dssp HCCSSEEEEECCCEEC-------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------
T ss_pred cCCCCeEEEECCCCCC-------CHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECCC--------
Confidence 7 9999999999763 34566677789999999999999999765443 5577899999997643
Q ss_pred eCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCC
Q 044682 366 LGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLP 445 (755)
Q Consensus 366 ~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 445 (755)
T Consensus 183 -------------------------------------------------------------------------------- 182 (276)
T 4dzt_A 183 -------------------------------------------------------------------------------- 182 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCC
Q 044682 446 YHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAV 525 (755)
Q Consensus 446 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~ 525 (755)
+.++.||++||.. ||+|||++|+++++...
T Consensus 183 ------------------------------------------~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~ 212 (276)
T 4dzt_A 183 ------------------------------------------DARASFSNYGSCV--------DLFAPGASIPSAWYTSD 212 (276)
T ss_dssp ------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTSS
T ss_pred ------------------------------------------CCcCCcCCCCCCc--------eEEeCCCCeEccccCCC
Confidence 5778999999987 99999999999987642
Q ss_pred CCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCC
Q 044682 526 APSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTG 586 (755)
Q Consensus 526 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~ 586 (755)
..|..++|||||||+|||++|||+|++|+++++|||++|++||++....+
T Consensus 213 -----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~ 262 (276)
T 4dzt_A 213 -----------TATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGRLSG 262 (276)
T ss_dssp -----------SCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESCCBS
T ss_pred -----------CceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCccCC
Confidence 37899999999999999999999999999999999999999999865433
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=2.4e-47 Score=402.08 Aligned_cols=238 Identities=27% Similarity=0.357 Sum_probs=200.6
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|..+++|+||+|+|||||||++||+|.+. +...++|.++
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR--------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTTT------------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc--------------------------cccCeecCCC------------
Confidence 37899999999999999999999999999742 2233344321
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
...+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..+++++||+|+++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g----~~~~~~~~~ai~~a~~ 119 (278)
T 2b6n_A 63 -----DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSG----SGSNSGVIAGINWVKN 119 (278)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS----CCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCC----CccHHHHHHHHHHHHh
Confidence 1245688999999999999873 6999999999999998776 4788999999999997
Q ss_pred --CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCc-cccCCCceEEeccccCCceeEEEEE
Q 044682 289 --DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDT-VVNLAPWLLTVGASTMDREFTSYVT 365 (755)
Q Consensus 289 --~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~~~~ 365 (755)
.+++|||||||... ...+..++.++.++|++||+||||+|..... .+...+++|+|||++.+
T Consensus 120 ~~~g~~Vin~S~G~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~-------- 184 (278)
T 2b6n_A 120 NASGPAVANMSLGGGA-------SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN-------- 184 (278)
T ss_dssp HCCSSEEEEECCCEEC-------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT--------
T ss_pred CCCCCeEEEECCCCCc-------CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC--------
Confidence 59999999999863 2455666778889999999999999976543 34567999999998643
Q ss_pred eCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCC
Q 044682 366 LGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLP 445 (755)
Q Consensus 366 ~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~ 445 (755)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCC
Q 044682 446 YHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAV 525 (755)
Q Consensus 446 ~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~ 525 (755)
+.++.||++||.. ||+|||++|+++++...
T Consensus 185 ------------------------------------------~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~ 214 (278)
T 2b6n_A 185 ------------------------------------------DSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN 214 (278)
T ss_dssp ------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEECTTST
T ss_pred ------------------------------------------CCcCCcCCCCCCC--------eEEeCCCCeECcccCCC
Confidence 5678999999865 99999999999986532
Q ss_pred CCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccC
Q 044682 526 APSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTD 583 (755)
Q Consensus 526 ~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~ 583 (755)
..|..++|||||||||||++|||+|++|++++.|||++|++||++..
T Consensus 215 -----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 215 -----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp -----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred -----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 37899999999999999999999999999999999999999998743
No 27
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.3e-47 Score=446.17 Aligned_cols=303 Identities=22% Similarity=0.215 Sum_probs=211.9
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
..+|..+++|+||+|||||||||++||+|.+. .+.+.++|..+.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~-------------------------~~~~~~~~~~~~----------- 103 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS----------- 103 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTCS-----------
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhc-------------------------cccCceeccCCC-----------
Confidence 48999999999999999999999999999742 112233443321
Q ss_pred CCCCCCCCCCC-CCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhh
Q 044682 209 YPTPEHSTARD-LDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAI 287 (755)
Q Consensus 209 ~~~~~~~~~~d-~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~ 287 (755)
+...|.| ..||||||||||||. .++. .+.||||+|+|+.+|+++..+.. .....+++....+.
T Consensus 104 ----~d~~p~d~~~gHGT~vAGiiaa~-~n~~--------g~~GVAp~A~l~~vkv~~~~~~~---~~~~~~~~~~~~a~ 167 (600)
T 2oxa_A 104 ----DDPTPTDPDTGHGTSVSGIIAAV-DNAI--------GTKGIAPRAQLQGFNLLDDNSQQ---LQKDWLYALGDSNA 167 (600)
T ss_dssp ----SCCCCCSTTCCHHHHHHHHHHCC-SSSS--------SCCCSSTTCEEEEECTTSTTCCC---CHHHHHHHTTTSHH
T ss_pred ----CCCCCCCCCCCCccHHHHHhhcc-cCCC--------cceEEccCCceEEEeeecCcccc---hHHHHHHHHhhhhc
Confidence 1123344 789999999999998 3322 24899999999999999876510 12245555555688
Q ss_pred hCCCcEEEEcCCCCCCC--CCCchhhHHHHHHHH---HHhcCcEEEEeccCCCCCC----------------------Cc
Q 044682 288 HDGVDVLSVSLGEPSHK--NTEYFKDAIAIGSFH---AMMHGILVVAAAGNEGPKP----------------------DT 340 (755)
Q Consensus 288 ~~gvdVIn~SlG~~~~~--~~~~~~~~~~~~~~~---a~~~Gi~vV~AAGN~G~~~----------------------~~ 340 (755)
.++++|||||||..... ........+..++.. +.++|++||+||||+|... ..
T Consensus 168 ~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~ 247 (600)
T 2oxa_A 168 SRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLD 247 (600)
T ss_dssp HHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSS
T ss_pred ccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccC
Confidence 89999999999987321 111122233222222 5578999999999998631 11
Q ss_pred cccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHH
Q 044682 341 VVNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQL 420 (755)
Q Consensus 341 ~~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~ 420 (755)
..+.++|+|+|||++.+
T Consensus 248 ~~~~s~~vItVgA~~~~--------------------------------------------------------------- 264 (600)
T 2oxa_A 248 PSNSNFWNLVVSALNAD--------------------------------------------------------------- 264 (600)
T ss_dssp GGGGSSSEEEEEEECTT---------------------------------------------------------------
T ss_pred CcccCceeEEEecccCC---------------------------------------------------------------
Confidence 12245678888887542
Q ss_pred HHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCC
Q 044682 421 AAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPST 500 (755)
Q Consensus 421 ~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 500 (755)
+.++.||++||+.
T Consensus 265 -------------------------------------------------------------------g~~a~fS~~G~~v 277 (600)
T 2oxa_A 265 -------------------------------------------------------------------GVRSSYSSVGSNI 277 (600)
T ss_dssp -------------------------------------------------------------------SSBCTTCCBCTTE
T ss_pred -------------------------------------------------------------------CCcCCcCCCCCCe
Confidence 5788999999988
Q ss_pred CCCCCCCCceeeCCCeEEeeecC-------CCCC--C------------CCCCCCCCcCCeeeccccchhhhHHHHHHHH
Q 044682 501 INPNIIKPDITAPGVEIIAAYSE-------AVAP--S------------KSPSDDRRIPFNACFGTSMSTPHISGIAGLL 559 (755)
Q Consensus 501 ~~~~~~KPDI~APG~~I~sa~~~-------~~~~--~------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl 559 (755)
||+|||++|.++.+. .... . ....+.....|..++|||||||||||++|||
T Consensus 278 --------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl 349 (600)
T 2oxa_A 278 --------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALL 349 (600)
T ss_dssp --------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHH
T ss_pred --------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHH
Confidence 999999996443321 1000 0 0000111234899999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcccccCCCCCCcc--------------------cCCCCCCCCCCcCCCCccCccccCCCccc
Q 044682 560 KTLHPDWSPAAIKSAIMTTATTTDHTGKNPI--------------------TDYDGLKATPFEYGAGHVNPNSAMDPGLV 619 (755)
Q Consensus 560 ~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~--------------------~~~~~~~~~~~~~G~G~vd~~~Al~~~lv 619 (755)
+|++|+|+|++||++|++||++++... .++ .........++.||||+||+.+|++.+..
T Consensus 350 ~s~~P~lt~~~vk~~L~~tA~~~~~~~-~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~ 428 (600)
T 2oxa_A 350 MSAYPDLSVRDLRDLLARSATRVDAKH-QPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp HHHSTTSCHHHHHHHHHHHCBCCSTTC-CCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTT
T ss_pred HHhCCCCCHHHHHHHHHHhCccCCccc-ccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHh
Confidence 999999999999999999999987543 221 11122233567899999999999997665
Q ss_pred ccC
Q 044682 620 YDL 622 (755)
Q Consensus 620 yd~ 622 (755)
|..
T Consensus 429 ~~~ 431 (600)
T 2oxa_A 429 HQP 431 (600)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
No 28
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=4.9e-47 Score=455.22 Aligned_cols=344 Identities=23% Similarity=0.241 Sum_probs=233.8
Q ss_pred CCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh-----CCCc
Q 044682 218 RDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH-----DGVD 292 (755)
Q Consensus 218 ~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~-----~gvd 292 (755)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++..... .+...+++++|.+|++ .|++
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g~--~~t~s~l~~AI~~Aid~a~~~~gad 335 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLGS--METGTALVRAMTKVMELCRDGRRID 335 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTSS--CBCHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCCc--ccChHHHHHHHHHHHHHHhhcCCce
Confidence 478999999999999986 22 234899999999999998765421 1356778888888887 7999
Q ss_pred EEEEcCCCCCCCCCCchhhHHHHHHHHHH-hcCcEEEEeccCCCCCCCcc--cc--CCCceEEeccccCCceeEEEEEeC
Q 044682 293 VLSVSLGEPSHKNTEYFKDAIAIGSFHAM-MHGILVVAAAGNEGPKPDTV--VN--LAPWLLTVGASTMDREFTSYVTLG 367 (755)
Q Consensus 293 VIn~SlG~~~~~~~~~~~~~~~~~~~~a~-~~Gi~vV~AAGN~G~~~~~~--~~--~~p~vitVgA~~~~~~~~~~~~~g 367 (755)
|||||||... .....+.+..++.++. ++|++||+||||+|+...++ +. .++++|+|||++...........
T Consensus 336 VINmS~G~~~---~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys~- 411 (1354)
T 3lxu_X 336 VINMSYGEHA---NWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYAM- 411 (1354)
T ss_dssp EEEECCCCCC---SCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----
T ss_pred EEEcCCccCC---CCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCccccccc-
Confidence 9999999974 2122345556666665 89999999999999865544 33 26999999998754321100000
Q ss_pred CccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCCCCCCc
Q 044682 368 DEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESLPLPYH 447 (755)
Q Consensus 368 ~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~ 447 (755)
T Consensus 412 -------------------------------------------------------------------------------- 411 (1354)
T 3lxu_X 412 -------------------------------------------------------------------------------- 411 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecCCCCC
Q 044682 448 LPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSEAVAP 527 (755)
Q Consensus 448 ~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~ 527 (755)
.....+.+++|||+||+. ++++||||+|||++|+++.....
T Consensus 412 -----------------------------------~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-- 452 (1354)
T 3lxu_X 412 -----------------------------------REKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-- 452 (1354)
T ss_dssp -----------------------------------------CCCCCCCCSCCS--SSSCCEEEEEEC-------------
T ss_pred -----------------------------------ccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC--
Confidence 000126789999999997 89999999999999999865321
Q ss_pred CCCCCCCCCcCCeeeccccchhhhHHHHHHHHHh----hCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCcC
Q 044682 528 SKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKT----LHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFEY 603 (755)
Q Consensus 528 ~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~~ 603 (755)
+.|..++|||||||||||++|||++ .+|.+++.+||++|++||++.+.. +++.|
T Consensus 453 ---------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~~-------------~~~~~ 510 (1354)
T 3lxu_X 453 ---------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGYV-------------DPFAQ 510 (1354)
T ss_dssp -------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTTS-------------CTTTS
T ss_pred ---------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCCC-------------Ccccc
Confidence 3789999999999999999999986 799999999999999999887543 35789
Q ss_pred CCCccCccccCCCcccccCCccchhhhhhcCCCCcc-ceecccCCccccCCCCCCCCCCCCCeEEeecCCceEEEEEEEE
Q 044682 604 GAGHVNPNSAMDPGLVYDLSFYDYLSYICSRGYNQS-IINNFTTPEIHSCPKSFSILDFNYPTIAIPDLNESVTITRRVK 682 (755)
Q Consensus 604 G~G~vd~~~Al~~~lvyd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ln~psi~~~~~~~~~~~~~tv~ 682 (755)
|+|+||+.+|++..+.|+....+++.|.|.++.+.. .|.+- .+ .+ ....+++++|+
T Consensus 511 G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR-~~---~~-------------------~~~~~~tv~V~ 567 (1354)
T 3lxu_X 511 GHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLR-QG---VQ-------------------RNSIDYNVYIE 567 (1354)
T ss_dssp SSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEEC-SS---CC-------------------CSCEEEEEEEE
T ss_pred cCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEe-cc---cc-------------------CCceEEEEEEe
Confidence 999999999999999999999999999999885322 11110 10 00 12233333332
Q ss_pred ec----C---C-CCceE--EEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEeccCCCCCCCCCCeEEEEEEEECC
Q 044682 683 NV----G---T-HNSSY--EANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPERNVEPKPKAEKYIFGKLIWSDS 750 (755)
Q Consensus 683 nv----~---~-~~~~y--~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~~~ 750 (755)
-+ . . ....| ++.+.... --|. -|..|.+ .++.++|.|.+.+ ... . .+..|++|...|-
T Consensus 568 p~f~~~~~~~~~~~i~f~~~l~L~~t~-~wv~-~p~~l~l--~~~~r~~~v~vDp----~~L-~-~G~h~~~v~~~D~ 635 (1354)
T 3lxu_X 568 PIFYNDKEADPKDKFNFNVRLNLIASQ-PWVQ-CGAFLDL--SYGTRSIAVRVDP----TGL-Q-PGVHSAVIRAYDT 635 (1354)
T ss_dssp EEESSCSCSSSTTCSCCCCEEEEEESS-TTEE-ECSCEEC--TTSCEEEEEEECG----GGC-C-SEEEEEEEEEEES
T ss_pred eeecCcccCChhhccceEEEEEEecCC-Ccee-cccceee--cCCCceEEEEECC----CCC-C-CcceeEEEEEEEc
Confidence 11 1 1 11111 22222211 1233 3777777 5778889999998 333 3 4678888876653
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=3.3e-47 Score=400.62 Aligned_cols=240 Identities=28% Similarity=0.343 Sum_probs=201.7
Q ss_pred cccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCCC
Q 044682 131 AWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFYP 210 (755)
Q Consensus 131 ~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~~ 210 (755)
.|. ..+|+||+|+|||||||++||+|.+. +...++|.
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~--------------------------~~~~~~~~---------------- 60 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR--------------------------AQMVKTYY---------------- 60 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEESS----------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc--------------------------cccccCCC----------------
Confidence 454 37899999999999999999999742 22233332
Q ss_pred CCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhCC
Q 044682 211 TPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHDG 290 (755)
Q Consensus 211 ~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~g 290 (755)
..+.|..||||||||||+|+. .||||+|+|+.+|++++.+ .++.+++++||+|+++++
T Consensus 61 ----~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g----~~~~~~~~~ai~~a~~~~ 118 (279)
T 2pwa_A 61 ----YSSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNG----SGQYSTIIAGMDFVASDK 118 (279)
T ss_dssp ----SCSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS----CCCHHHHHHHHHHHHHHG
T ss_pred ----CCCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCC----CcCHHHHHHHHHHHHhcC
Confidence 134578999999999999873 7999999999999998876 478899999999999998
Q ss_pred C-------cEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCc-cccCCCceEEeccccCCceeEE
Q 044682 291 V-------DVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDT-VVNLAPWLLTVGASTMDREFTS 362 (755)
Q Consensus 291 v-------dVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~ 362 (755)
+ +|||||||... ...+..++.++.++|++||+||||+|..... .+...|++|+|||++.+
T Consensus 119 ~~~~~~~~~Vin~S~G~~~-------~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~----- 186 (279)
T 2pwa_A 119 NNRNCPKGVVASLSLGGGY-------SSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY----- 186 (279)
T ss_dssp GGSCCTTEEEEEECCCEEC-------CHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-----
T ss_pred ccccCCCccEEEecCCCCC-------CHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC-----
Confidence 7 99999999753 2456667778899999999999999976533 45567999999998643
Q ss_pred EEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCC
Q 044682 363 YVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESL 442 (755)
Q Consensus 363 ~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~ 442 (755)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeec
Q 044682 443 PLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYS 522 (755)
Q Consensus 443 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~ 522 (755)
+.++.||++||.. ||+|||++|+++++
T Consensus 187 ---------------------------------------------~~~~~~S~~G~~~--------di~APG~~i~s~~~ 213 (279)
T 2pwa_A 187 ---------------------------------------------DRRSSFSNYGSVL--------DIFGPGTDILSTWI 213 (279)
T ss_dssp ---------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEET
T ss_pred ---------------------------------------------CCcCCcCCCCCcc--------eEEEecCCeEEeec
Confidence 5778999999965 99999999999997
Q ss_pred CCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCCCCCCc
Q 044682 523 EAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLKATPFE 602 (755)
Q Consensus 523 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~~~~~~ 602 (755)
. +.|..++|||||||||||++|||+|+ |.++|.|||++|++||++... ..
T Consensus 214 ~-------------~~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~----------------~~ 263 (279)
T 2pwa_A 214 G-------------GSTRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL----------------SN 263 (279)
T ss_dssp T-------------TEEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC----------------BS
T ss_pred C-------------CCEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc----------------CC
Confidence 6 37899999999999999999999999 999999999999999987532 24
Q ss_pred CCCCccCc
Q 044682 603 YGAGHVNP 610 (755)
Q Consensus 603 ~G~G~vd~ 610 (755)
+|+|..|+
T Consensus 264 ~~~g~~n~ 271 (279)
T 2pwa_A 264 IPFGTVNL 271 (279)
T ss_dssp CCTTSCCE
T ss_pred CCCCCccE
Confidence 77888876
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=8.4e-47 Score=426.85 Aligned_cols=296 Identities=16% Similarity=0.185 Sum_probs=219.0
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
+.+|+.+++|+||+|||||||||++||+|.+.- .....++|.++...
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~~~--------- 74 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------------------DPGASFDVNDQDPD--------- 74 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------------------CGGGCEETTTTBSC---------
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------------------CccCcccccCCCCC---------
Confidence 489999999999999999999999999997520 00112333322100
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
..+...+.|..||||||||||||...++.. +.||||+|+|+.+|+++ +..+++++|++++++
T Consensus 75 --p~~~~~~~d~~gHGT~vAGiiaa~~~n~~g--------~~GvAp~a~i~~~rv~~--------g~~~~~~~ai~~a~~ 136 (471)
T 1p8j_A 75 --PQPRYTQMNDNRHGTRCAGEVAAVANNGVC--------GVGVAYNARIGGVRMLD--------GEVTDAVEARSLGLN 136 (471)
T ss_dssp --CCCCCCTTCTTCHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECSS--------SCCCHHHHHHHHTSC
T ss_pred --CCCccCCCCCCCcHHHHHHHHHeeccCCCC--------CEEECCCCeEEEEEccC--------CchhHHHHHHHhhhc
Confidence 001124568899999999999997644322 38999999999999985 346789999999999
Q ss_pred -CCCcEEEEcCCCCCCCC-CCchhhHHHHHHHHHH-----hcCcEEEEeccCCCCCCCc----cccCCCceEEeccccCC
Q 044682 289 -DGVDVLSVSLGEPSHKN-TEYFKDAIAIGSFHAM-----MHGILVVAAAGNEGPKPDT----VVNLAPWLLTVGASTMD 357 (755)
Q Consensus 289 -~gvdVIn~SlG~~~~~~-~~~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~~p~vitVgA~~~~ 357 (755)
++++|||||||...... .......+..++.++. .+|++||+||||+|..... ....++++|+|||++.+
T Consensus 137 ~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~ 216 (471)
T 1p8j_A 137 PNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF 216 (471)
T ss_dssp TTTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT
T ss_pred cCCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC
Confidence 99999999999863100 0011222333344443 3699999999999975332 12345899999998653
Q ss_pred ceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCC
Q 044682 358 REFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQL 437 (755)
Q Consensus 358 ~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~ 437 (755)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeE
Q 044682 438 ENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEI 517 (755)
Q Consensus 438 ~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I 517 (755)
+.++.||++||.. ....+|...+||.+|
T Consensus 217 --------------------------------------------------g~~a~~S~~g~~~--~~~~~~~~~~~g~~i 244 (471)
T 1p8j_A 217 --------------------------------------------------GNVPWYSEACSST--LATTYSSGNQNEKQI 244 (471)
T ss_dssp --------------------------------------------------SCCCTTCCBCTTC--CEEEECCCSTTSCCE
T ss_pred --------------------------------------------------CCcccccCCCCcc--eEEeCCCCCCCCCCE
Confidence 5678999999987 444556666667899
Q ss_pred EeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCcccCCCCCC
Q 044682 518 IAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPITDYDGLK 597 (755)
Q Consensus 518 ~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~~~~~~~ 597 (755)
+++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++.+... ..+.......
T Consensus 245 ~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~-~~~~~n~~g~ 311 (471)
T 1p8j_A 245 VTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNA-DDWATNGVGR 311 (471)
T ss_dssp EEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCC-SCCEECTTSC
T ss_pred EEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCC-CCceecCCCc
Confidence 9997642 36899999999999999999999999999999999999999999886544 3333222223
Q ss_pred CCCCcCCCCccCccccCCCcccc
Q 044682 598 ATPFEYGAGHVNPNSAMDPGLVY 620 (755)
Q Consensus 598 ~~~~~~G~G~vd~~~Al~~~lvy 620 (755)
..+..||+|+||+.+|++.+..+
T Consensus 312 ~~~~~~G~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 312 KVSHSYGYGLLDAGAMVALAQNW 334 (471)
T ss_dssp EEBTTTBTCBCCHHHHHHHHHTC
T ss_pred ccCCCCCCEEEcHhHHHHHhhcc
Confidence 34678999999999999965543
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=8e-46 Score=421.63 Aligned_cols=288 Identities=18% Similarity=0.199 Sum_probs=217.8
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
..+|..+++|+||+|||||||||++||+|.+.- ...+.++|.++.
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~~----------- 88 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF------------------------CAEGSWDFNDNT----------- 88 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB------------------------CGGGCEETTTTB-----------
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc------------------------cccCcccCCCCC-----------
Confidence 389999999999999999999999999998530 011233443320
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH 288 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~ 288 (755)
.+.....|..||||||||||||...++.. +.||||+|+|+.+|+++. .+...++++||+|+++
T Consensus 89 ---~~~~p~~d~~gHGT~vAGiiaa~~~n~~~--------~~GvAp~a~i~~~rv~~~------~~~~~~~~~ai~~a~~ 151 (503)
T 2id4_A 89 ---NLPKPRLSDDYHGTRCAGEIAAKKGNNFC--------GVGVGYNAKISGIRILSG------DITTEDEAASLIYGLD 151 (503)
T ss_dssp ---SCCCCCSTTTTHHHHHHHHHHCCSSSSSS--------CCCTTTTSEEEEEECTTS------CCCHHHHHHHTTTTTT
T ss_pred ---CCCCCCCCCCChHHHHHHHHHhccCCCCC--------cEEECCCCEEEEEEeeCC------CCChHHHHHHHHhHhh
Confidence 01123357889999999999998644322 379999999999999863 2678899999999999
Q ss_pred CCCcEEEEcCCCCCCCC-CCchhhHHHHHHHHHH-----hcCcEEEEeccCCCCCCCc--cc--cCCCceEEeccccCCc
Q 044682 289 DGVDVLSVSLGEPSHKN-TEYFKDAIAIGSFHAM-----MHGILVVAAAGNEGPKPDT--VV--NLAPWLLTVGASTMDR 358 (755)
Q Consensus 289 ~gvdVIn~SlG~~~~~~-~~~~~~~~~~~~~~a~-----~~Gi~vV~AAGN~G~~~~~--~~--~~~p~vitVgA~~~~~ 358 (755)
++ +|||||||...... .......+..++.++. .+|++||+||||+|..... .. ..++++|+|||++.+
T Consensus 152 ~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~- 229 (503)
T 2id4_A 152 VN-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK- 229 (503)
T ss_dssp TC-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT-
T ss_pred cC-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC-
Confidence 98 99999999763100 1112233445555554 4799999999999965332 22 246789999998653
Q ss_pred eeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCC
Q 044682 359 EFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLE 438 (755)
Q Consensus 359 ~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 438 (755)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceee----CC
Q 044682 439 NESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITA----PG 514 (755)
Q Consensus 439 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~A----PG 514 (755)
+.++.||++||.. |++| ||
T Consensus 230 -------------------------------------------------~~~a~~S~~g~~~--------~~~a~~~gpG 252 (503)
T 2id4_A 230 -------------------------------------------------DLHPPYSEGCSAV--------MAVTYSSGSG 252 (503)
T ss_dssp -------------------------------------------------SCCCTTCCCCTTE--------EEEEECSBTT
T ss_pred -------------------------------------------------CCcCCcCCCCCcc--------eEeecCCCCC
Confidence 5678999999987 8888 89
Q ss_pred CeEEeeecCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCC-CCCcccCC
Q 044682 515 VEIIAAYSEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHT-GKNPITDY 593 (755)
Q Consensus 515 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~-~~~~~~~~ 593 (755)
..|+++.... ..|..++|||||||||||++|||+|++|++++.+||++|+.||+++... . ..+...
T Consensus 253 ~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~-~~~~~~ 319 (503)
T 2id4_A 253 EYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNAD-GDWRDS 319 (503)
T ss_dssp BCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGG-GCCEEC
T ss_pred CceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcC-CCceec
Confidence 9999995431 3789999999999999999999999999999999999999999987654 2 222222
Q ss_pred CCCCCCCCcCCCCccCccccCCCcccc
Q 044682 594 DGLKATPFEYGAGHVNPNSAMDPGLVY 620 (755)
Q Consensus 594 ~~~~~~~~~~G~G~vd~~~Al~~~lvy 620 (755)
......+..||+|+||+++|++...-+
T Consensus 320 ~~g~~~~~~~G~G~vda~~Av~~a~~~ 346 (503)
T 2id4_A 320 AMGKKYSHRYGFGKIDAHKLIEMSKTW 346 (503)
T ss_dssp SSSSEEBTTTBTCBCCHHHHHHHHTSC
T ss_pred CCCCccCcccCCcEecHHHHHHHHhcc
Confidence 222334568999999999999965433
No 32
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=1.3e-45 Score=389.51 Aligned_cols=230 Identities=30% Similarity=0.363 Sum_probs=195.4
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFY 209 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~ 209 (755)
..|... +|+||+|||||||||++||+|.+. +.....|..
T Consensus 24 ~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~-------------- 62 (279)
T 3f7m_A 24 YAYDTS-AGAGACVYVIDTGVEDTHPDFEGR--------------------------AKQIKSYAS-------------- 62 (279)
T ss_dssp EEECTT-TTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEECSS--------------
T ss_pred eeecCC-CCCCCEEEEEcCCCCCCChhhccc--------------------------cccccCCCC--------------
Confidence 566666 999999999999999999999753 223333322
Q ss_pred CCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC
Q 044682 210 PTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD 289 (755)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~ 289 (755)
...|..||||||||||+|+. .||||+|+|+.+|+++..+ .+..++++++++|++++
T Consensus 63 ------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~----~~~~~~~~~ai~~~~~~ 118 (279)
T 3f7m_A 63 ------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSG----SGSLSNIIAGMDFVASD 118 (279)
T ss_dssp ------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS----CCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCC----CcCHHHHHHHHHHHHhc
Confidence 12278999999999999873 7999999999999998776 57889999999999988
Q ss_pred C-------CcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCcc-ccCCCceEEeccccCCceeE
Q 044682 290 G-------VDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDTV-VNLAPWLLTVGASTMDREFT 361 (755)
Q Consensus 290 g-------vdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~~-~~~~p~vitVgA~~~~~~~~ 361 (755)
+ ++|||||||... ...+..++..+.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 119 ~~~~~~~~~~Vin~S~g~~~-------~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~---- 187 (279)
T 3f7m_A 119 RQSRNCPRRTVASMSLGGGY-------SAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN---- 187 (279)
T ss_dssp GGGSCCTTEEEEEECCCEEC-------CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT----
T ss_pred cccccCCCCeEEEeCCCcCc-------cHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC----
Confidence 6 899999999652 35566677788999999999999999765443 5577999999997643
Q ss_pred EEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCC
Q 044682 362 SYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENES 441 (755)
Q Consensus 362 ~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~ 441 (755)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeee
Q 044682 442 LPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAY 521 (755)
Q Consensus 442 ~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~ 521 (755)
+.++.||++||.. ||+|||++|++++
T Consensus 188 ----------------------------------------------~~~~~~S~~g~~~--------di~ApG~~i~s~~ 213 (279)
T 3f7m_A 188 ----------------------------------------------DVRSTFSNYGRVV--------DIFAPGTSITSTW 213 (279)
T ss_dssp ----------------------------------------------SBBCTTCCBSTTC--------CEEEECSSEEEEC
T ss_pred ----------------------------------------------CCCCCCCCCCCCC--------eEEECCCCeEeec
Confidence 5778999999966 9999999999998
Q ss_pred cCCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccC
Q 044682 522 SEAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTD 583 (755)
Q Consensus 522 ~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~ 583 (755)
+. +.|..++|||||||+|||++|||+|++|. ++.+||++|++||++..
T Consensus 214 ~~-------------~~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 214 IG-------------GRTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp GG-------------GCEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred CC-------------CCEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 86 37899999999999999999999999999 99999999999998754
No 33
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.2e-45 Score=413.43 Aligned_cols=279 Identities=20% Similarity=0.199 Sum_probs=200.8
Q ss_pred ccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCCC
Q 044682 130 SAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSFY 209 (755)
Q Consensus 130 ~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~~ 209 (755)
..|..+++|+||+|+|||||||++||+|.+.- +.....+..+.+ +
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------------------------~~~~~~~v~~~d------g---- 61 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------------------------MVTDFENVPEED------G---- 61 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE-------------------------EEEEEECCCCCC-----------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc-------------------------cccCcccccCCC------C----
Confidence 47888999999999999999999999998530 000111110000 0
Q ss_pred CCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhhC
Q 044682 210 PTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIHD 289 (755)
Q Consensus 210 ~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~~ 289 (755)
......+.|..||||||||||+|+. .||||+|+|+.+|++++.+ .++.+++++||+|+++.
T Consensus 62 -~~f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G----~g~~s~ii~ai~~a~~~ 122 (546)
T 2qtw_B 62 -TRFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG----KGTVSGTLIGLEFIRKS 122 (546)
T ss_dssp -------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS----EEEHHHHHHHHHHHHHH
T ss_pred -ccccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCC----CcCHHHHHHHHHHHHHh
Confidence 0001245688999999999999874 6999999999999998766 46788999999999974
Q ss_pred ------CCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEEEEeccCCCCCCCc-cccCCCceEEeccccCCceeEE
Q 044682 290 ------GVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILVVAAAGNEGPKPDT-VVNLAPWLLTVGASTMDREFTS 362 (755)
Q Consensus 290 ------gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~vV~AAGN~G~~~~~-~~~~~p~vitVgA~~~~~~~~~ 362 (755)
+++|||||||... ...+..++.++.++|++||+||||+|.+... .+...|++|+|||++.+...
T Consensus 123 ~~~~~~g~~VINmSlGg~~-------s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~-- 193 (546)
T 2qtw_B 123 QLVQPVGPLVVLLPLAGGY-------SRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP-- 193 (546)
T ss_dssp HHHSCCSCEEEEECEEEEC-------CHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB--
T ss_pred hhhccCCCeEEEecCCCCC-------cHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc--
Confidence 9999999999652 3456667778899999999999999976533 34567999999998754210
Q ss_pred EEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHHHHHcCccEEEEecCCCCCCCCC
Q 044682 363 YVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQLAAQAGAAGLILVNPKQLENESL 442 (755)
Q Consensus 363 ~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~ 442 (755)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCCCCCCCCCCceeeCCCeEEeeec
Q 044682 443 PLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYS 522 (755)
Q Consensus 443 ~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~ 522 (755)
...-..||++||. |||+|||++|+++++
T Consensus 194 --------------------------------------------a~~s~~fSn~G~~--------vDI~APG~~I~St~~ 221 (546)
T 2qtw_B 194 --------------------------------------------VTLGTLGTNFGRC--------VDLFAPGEDIIGASS 221 (546)
T ss_dssp --------------------------------------------CEETTEECCBSTT--------CCEEEECSSEEEECT
T ss_pred --------------------------------------------ccccCCcCCCCCc--------ceEEecCccEEeecc
Confidence 0001128999984 499999999999987
Q ss_pred CCCCCCCCCCCCCCcCCeeeccccchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhcccccCCCCCCccc------CCC--
Q 044682 523 EAVAPSKSPSDDRRIPFNACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTATTTDHTGKNPIT------DYD-- 594 (755)
Q Consensus 523 ~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~------~~~-- 594 (755)
... ..|..++|||||||||||++|||+|++|+++|+|||++|++||.+..... ..+. ..+
T Consensus 222 ~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~i~~-~~~p~~~~~~tpN~l 289 (546)
T 2qtw_B 222 DCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDVINE-AWFPEDQRVLTPNLV 289 (546)
T ss_dssp TST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESCSCG-GGSCHHHHTTSCCEE
T ss_pred CCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccccCC-ccCccccCCCCccch
Confidence 632 27899999999999999999999999999999999999999998643221 1010 000
Q ss_pred -CCCCCCCcCCCCc--cCccccCC
Q 044682 595 -GLKATPFEYGAGH--VNPNSAMD 615 (755)
Q Consensus 595 -~~~~~~~~~G~G~--vd~~~Al~ 615 (755)
........+|+|+ .+++.+..
T Consensus 290 ~~~~~~~~~~G~~l~~~~~w~a~s 313 (546)
T 2qtw_B 290 AALPPSTHGAGWQLFCRTVWSAHS 313 (546)
T ss_dssp CCCCCTTCC--CCCEEEEEECCCC
T ss_pred hccCCcccccCCCcchhchhccCC
Confidence 1122456788888 77777765
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=7.7e-44 Score=415.69 Aligned_cols=301 Identities=22% Similarity=0.212 Sum_probs=207.1
Q ss_pred cccccCCCCCCceEEEEEccCCCCCCcCccCCCCCCCCCcccceeecCCCCcccccccccceeeccchhhhhhhccCCCC
Q 044682 129 NSAWNKGRFGEDVIIGVIDSGVWPESKSFSDEGMGPVPLRWRGICQNDTHYGFQCNRKLIGMRYYNQGQIEHARAQNSSF 208 (755)
Q Consensus 129 ~~~~~~~~~G~gV~VgVIDtGid~~Hp~f~~~g~~~~~~~w~g~~~~~~~~~~~~n~kiig~~~~~~~~~~~~~~~g~~~ 208 (755)
..+|+++++|+||+|||||||||++||+|.+. ...+.++|.++.
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~----------- 103 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS----------- 103 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSS-----------
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCC-----------
Confidence 37999999999999999999999999999752 111223333221
Q ss_pred CCCCCCCCCCCCCCCchhhhHhhccCCCCcccccccCCcceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhh-hhhh
Q 044682 209 YPTPEHSTARDLDGHGTHAASTAVGNFVANVSVFGNGYGTAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAF-DDAI 287 (755)
Q Consensus 209 ~~~~~~~~~~d~~gHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai-~~a~ 287 (755)
.++....|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ .+..++++.|+ +++.
T Consensus 104 ---~dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~----~~~~~~~~~a~~~~~~ 167 (600)
T 3hjr_A 104 ---DDPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNS----QQLQKDWLYALGDSNA 167 (600)
T ss_dssp ---SCCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTC----CCCHHHHHHHTTSSHH
T ss_pred ---CCCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCC----CccHHHHHHHhhhhhh
Confidence 112234467899999999999863 21 12 38999999999999998776 46677777776 6777
Q ss_pred hCCCcEEEEcCCCCCCC---CCCchhhHHHHHHHH--HHhcCcEEEEeccCCCCCCC----------------------c
Q 044682 288 HDGVDVLSVSLGEPSHK---NTEYFKDAIAIGSFH--AMMHGILVVAAAGNEGPKPD----------------------T 340 (755)
Q Consensus 288 ~~gvdVIn~SlG~~~~~---~~~~~~~~~~~~~~~--a~~~Gi~vV~AAGN~G~~~~----------------------~ 340 (755)
.++++|||+|||..... ........+..++.. ...+|+++|+||||.+.... .
T Consensus 168 ~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~~~~~~~g~~~~~~~~~~~~d 247 (600)
T 3hjr_A 168 SRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLD 247 (600)
T ss_dssp HHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESSCCCCCSSBTTSS
T ss_pred hcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccccccccCCCCCCCCccccccc
Confidence 88999999999976211 011122222222222 23689999999999763210 0
Q ss_pred cccCCCceEEeccccCCceeEEEEEeCCccEEEEEeecceeecCCCCCCCCCCCCCCCCCccceEEEEecCCcchhhHHH
Q 044682 341 VVNLAPWLLTVGASTMDREFTSYVTLGDEQIFKEIMQGPLTQHSMIGNLECNPGAIDPKKINGKILLCMNHTHGIDKSQL 420 (755)
Q Consensus 341 ~~~~~p~vitVgA~~~~~~~~~~~~~g~~~~~~g~l~~plv~~~~~~~~~c~~~~~~~~~~~gkivl~~~~~~~~~~~~~ 420 (755)
.....+++|+|||++.
T Consensus 248 ~~~~~~~~IsVgA~~~---------------------------------------------------------------- 263 (600)
T 3hjr_A 248 PSNSNFWNLVVSALNA---------------------------------------------------------------- 263 (600)
T ss_dssp GGGGSSSEEEEEEECT----------------------------------------------------------------
T ss_pred CccccCcceEEeeecC----------------------------------------------------------------
Confidence 0112345566665543
Q ss_pred HHHcCccEEEEecCCCCCCCCCCCCCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecceeecccCCCCccccccCCCCCC
Q 044682 421 AAQAGAAGLILVNPKQLENESLPLPYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVKTEFNTKPSPQMTFFSSRGPST 500 (755)
Q Consensus 421 ~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~Gp~~ 500 (755)
.+.++.||++|+..
T Consensus 264 ------------------------------------------------------------------~g~~a~yS~~G~~v 277 (600)
T 3hjr_A 264 ------------------------------------------------------------------DGVRSSYSSVGSNI 277 (600)
T ss_dssp ------------------------------------------------------------------TSSBCTTCCBCTTC
T ss_pred ------------------------------------------------------------------CCCEeecccCCcce
Confidence 26788999999988
Q ss_pred CCCCCCCCceeeCCCeE--------EeeecCCCCCC-------------CCCCCCCCcCCeeeccccchhhhHHHHHHHH
Q 044682 501 INPNIIKPDITAPGVEI--------IAAYSEAVAPS-------------KSPSDDRRIPFNACFGTSMSTPHISGIAGLL 559 (755)
Q Consensus 501 ~~~~~~KPDI~APG~~I--------~sa~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl 559 (755)
+++|||.++ .+..++..... ..........|..++|||||||||||++|||
T Consensus 278 --------~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALl 349 (600)
T 3hjr_A 278 --------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALL 349 (600)
T ss_dssp --------CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHH
T ss_pred --------eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHH
Confidence 999999763 22222211000 0011122346788999999999999999999
Q ss_pred HhhCCCCCHHHHHHHHHhcccccCCCCCCccc--------------------CCCCCCCCCCcCCCCccCccccCCCccc
Q 044682 560 KTLHPDWSPAAIKSAIMTTATTTDHTGKNPIT--------------------DYDGLKATPFEYGAGHVNPNSAMDPGLV 619 (755)
Q Consensus 560 ~q~~P~~sp~~ik~~L~~TA~~~~~~~~~~~~--------------------~~~~~~~~~~~~G~G~vd~~~Al~~~lv 619 (755)
+|+||+||++|||++|++||++++... .|+. ...........||+|+||+.+|++.+..
T Consensus 350 l~a~P~lt~~~v~~~L~~TA~~~d~~~-~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~~ 428 (600)
T 3hjr_A 350 MSAYPDLSVRDLRDLLARSATRVDAKH-QPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAAN 428 (600)
T ss_dssp HHHSTTSCHHHHHHHHHHHCBCCSTTC-CCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTT
T ss_pred HHHCCCCCHHHHHHHHHhhCccCCCCC-CcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhhc
Confidence 999999999999999999999998766 4422 1112222356799999999999986544
Q ss_pred c
Q 044682 620 Y 620 (755)
Q Consensus 620 y 620 (755)
+
T Consensus 429 w 429 (600)
T 3hjr_A 429 H 429 (600)
T ss_dssp C
T ss_pred C
Confidence 4
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=9.7e-26 Score=257.09 Aligned_cols=101 Identities=26% Similarity=0.376 Sum_probs=77.9
Q ss_pred ceeeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh---CCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcC
Q 044682 248 TAKGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH---DGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHG 324 (755)
Q Consensus 248 ~~~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~---~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~G 324 (755)
.+.||||+|+|+.|++. ...++++++|+||++ ++++|||+|||.............+..++..|..+|
T Consensus 273 ~~~gvAp~a~i~~~~~~---------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~G 343 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP---------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALG 343 (552)
T ss_dssp HHHHHCTTSEEEEEECC---------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTT
T ss_pred hhhccCCCCeEEEEEcC---------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCC
Confidence 35899999999999973 345789999999998 799999999998631001112345666777888999
Q ss_pred cEEEEeccCCCCCC--------CccccCCCceEEeccccCC
Q 044682 325 ILVVAAAGNEGPKP--------DTVVNLAPWLLTVGASTMD 357 (755)
Q Consensus 325 i~vV~AAGN~G~~~--------~~~~~~~p~vitVgA~~~~ 357 (755)
|+||+||||+|... ...+..+|+|++||+++..
T Consensus 344 i~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~~ 384 (552)
T 1t1e_A 344 VTVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRLV 384 (552)
T ss_dssp CEEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEEE
T ss_pred eEEEEecCCCCCCCCCCCCcccccCcccCCCEEEEeccccc
Confidence 99999999999653 2344567999999998753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=1.7e-21 Score=211.88 Aligned_cols=103 Identities=18% Similarity=0.175 Sum_probs=79.4
Q ss_pred eeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhhh-CCCcEEEEcCCCCCCC-CCCchhhHHHHHHHHHHhcCcEE
Q 044682 250 KGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAIH-DGVDVLSVSLGEPSHK-NTEYFKDAIAIGSFHAMMHGILV 327 (755)
Q Consensus 250 ~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~~-~gvdVIn~SlG~~~~~-~~~~~~~~~~~~~~~a~~~Gi~v 327 (755)
..+||+++++.|++.+... +..++++++|+||++ ++++|||+|||..... ......+.+..++..|..+||+|
T Consensus 90 g~~aP~a~~~~~~~~~~~~-----~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitv 164 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSA-----SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTF 164 (372)
T ss_dssp HHTTSCEEEEEEEEECTTS-----STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEE
T ss_pred hhcCCCCcEEEEEeCCCCC-----cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEE
Confidence 3468999999999986543 677899999999998 8999999999976210 00112345677777888999999
Q ss_pred EEeccCCCCCCC-------------ccccCCCceEEeccccCC
Q 044682 328 VAAAGNEGPKPD-------------TVVNLAPWLLTVGASTMD 357 (755)
Q Consensus 328 V~AAGN~G~~~~-------------~~~~~~p~vitVgA~~~~ 357 (755)
|+||||+|...+ ..+...|+|++||+++..
T Consensus 165 v~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 165 SVSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp EEECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred EEEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 999999997542 233467999999998753
No 37
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.96 E-value=7.2e-10 Score=99.30 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=65.6
Q ss_pred CCceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEE
Q 044682 22 AKKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSI 101 (755)
Q Consensus 22 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V 101 (755)
..++|||+|++.... .....|++|+.+++++ +....++.++|++.|+||+++|+++++++|+++|+|.+|
T Consensus 36 ip~~YIV~lk~~~~~---------~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~V 105 (114)
T 2w2n_P 36 LPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 105 (114)
T ss_dssp EEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCcEEEEECCCCCH---------HHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEE
Confidence 457899999986642 4455899999988764 335578999999999999999999999999999999999
Q ss_pred EeCccccc
Q 044682 102 FLDEGRKV 109 (755)
Q Consensus 102 ~~~~~~~~ 109 (755)
++|+.++.
T Consensus 106 E~D~~v~~ 113 (114)
T 2w2n_P 106 EEDSSVFA 113 (114)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99988754
No 38
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.95 E-value=3.1e-09 Score=120.31 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=63.4
Q ss_pred eeecCCCeEEEEEeeecCCCCCCCCChhHHHHhhhhhh--hCCCcEEEEcCCCCCCCCCCchhhHHHHHHHHHHhcCcEE
Q 044682 250 KGGSPRARLASYKSCWNVNGQPLDCRDSDILSAFDDAI--HDGVDVLSVSLGEPSHKNTEYFKDAIAIGSFHAMMHGILV 327 (755)
Q Consensus 250 ~GvAP~A~L~~~kv~~~~~~~~~~~~~~~i~~ai~~a~--~~gvdVIn~SlG~~~~~~~~~~~~~~~~~~~~a~~~Gi~v 327 (755)
.++++...++.|...... .....++..+++.. .+-++|||+|||.........+...+...+..+..+||.|
T Consensus 262 ~a~~~~i~~~~~~~~g~~------~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv 335 (544)
T 3edy_A 262 MSAGANISTWVYSSPGRH------EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTL 335 (544)
T ss_dssp HHHSTTSEEEEECCCSCC------TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred hccCCCceEEEEecCCcc------cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEE
Confidence 445556666555432111 12233444444333 3568999999998732112223345566667788999999
Q ss_pred EEeccCCCCCCC----------ccccCCCceEEeccccC
Q 044682 328 VAAAGNEGPKPD----------TVVNLAPWLLTVGASTM 356 (755)
Q Consensus 328 V~AAGN~G~~~~----------~~~~~~p~vitVgA~~~ 356 (755)
++|+||+|.... ..+...|||++||+++.
T Consensus 336 ~~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 336 LFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp EEECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred EEecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 999999996431 34457799999999864
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.77 E-value=2.7e-08 Score=83.24 Aligned_cols=73 Identities=16% Similarity=0.246 Sum_probs=57.1
Q ss_pred CCceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEE
Q 044682 22 AKKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSI 101 (755)
Q Consensus 22 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V 101 (755)
..++|||.|++.... .. .+..++.. ...++.++|++ |+||+++++++++++|+++|+|.+|
T Consensus 7 i~~~YIV~~k~~~~~--------~~---~~~~~~~~-------~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~V 67 (80)
T 3cnq_P 7 GEKKYIVGFKQGFKS--------CA---KKEDVISE-------KGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYV 67 (80)
T ss_dssp -CCEEEEEECTTCCS--------HH---HHHHHHHT-------TTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEE
T ss_pred CCCCEEEEECCCCCh--------HH---HHHHHHHH-------cCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEE
Confidence 357899999987653 11 12233222 23589999998 9999999999999999999999999
Q ss_pred EeCcccccccCC
Q 044682 102 FLDEGRKVQTTR 113 (755)
Q Consensus 102 ~~~~~~~~~~~~ 113 (755)
++++.++++++.
T Consensus 68 e~D~~v~~~tt~ 79 (80)
T 3cnq_P 68 EEDKLYRALSAT 79 (80)
T ss_dssp EECCEEEECCC-
T ss_pred EeCcEEEEeeec
Confidence 999999887664
No 40
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.69 E-value=1.5e-07 Score=91.47 Aligned_cols=101 Identities=18% Similarity=0.079 Sum_probs=79.0
Q ss_pred ceeecCC-CCCCCCCCCCCCCCC-------ccceEEEEecCC-c-chhhHHHHHHcCccEEEEecCCCCCCCCC----CC
Q 044682 379 PLTQHSM-IGNLECNPGAIDPKK-------INGKILLCMNHT-H-GIDKSQLAAQAGAAGLILVNPKQLENESL----PL 444 (755)
Q Consensus 379 plv~~~~-~~~~~c~~~~~~~~~-------~~gkivl~~~~~-~-~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~----~~ 444 (755)
.+++... .....|.+....... .++||+|++||. | |.+|..+++++||.++|+||+...+.... ..
T Consensus 73 ~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~ 152 (194)
T 3icu_A 73 VLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPG 152 (194)
T ss_dssp EEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTT
T ss_pred EEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCC
Confidence 5666543 356789987653222 478999999999 9 99999999999999999999853222111 12
Q ss_pred CCcccEEEeeHhhHHHHHHHHhcCCCcEEEEecce
Q 044682 445 PYHLPTSLVEFDDAQSIIAYNNSIKNPVASVSDVK 479 (755)
Q Consensus 445 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 479 (755)
...||+++|+..+|+.|++++..+..++++|....
T Consensus 153 ~~~IPsv~Is~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 153 AVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CCSSEEEEECHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CCceeEEEECHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 34699999999999999999999999888887654
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.59 E-value=6.1e-08 Score=87.80 Aligned_cols=78 Identities=17% Similarity=0.123 Sum_probs=60.3
Q ss_pred CCceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEE
Q 044682 22 AKKSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSI 101 (755)
Q Consensus 22 ~~~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V 101 (755)
-.++|||.||+.... .....|.+++..+..+ .....++.++|++.|+||+++++++++++|+++|+|.+|
T Consensus 46 Ip~~YIV~~K~~~~~---------~~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~V 115 (124)
T 2qtw_A 46 LPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 115 (124)
T ss_dssp EEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCCEEEEECCCCCH---------HHHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEE
Confidence 347899999987653 3344566666554321 113458999999999999999999999999999999999
Q ss_pred EeCccccc
Q 044682 102 FLDEGRKV 109 (755)
Q Consensus 102 ~~~~~~~~ 109 (755)
++++.++.
T Consensus 116 E~D~~v~a 123 (124)
T 2qtw_A 116 EEDSSVFA 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99987753
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.54 E-value=2e-07 Score=76.90 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=58.1
Q ss_pred ceEEEEeCCCCCCCCCCCcchhhhhhhHHHHHHHhhCCcccccccEEEEec-ceeeeEEEEeCHHHHHHHhCC--CCeEE
Q 044682 24 KSYIVYLGTHSHGKNPTADDINRARNHHHNFLGSFFGSVKKARDSISCSYG-RHINGFAAILEEEHAQQLAKH--PEVLS 100 (755)
Q Consensus 24 ~~yiV~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~-~~~~g~s~~l~~~~~~~L~~~--p~V~~ 100 (755)
..|||.|++.... ...+.|.+++...- .++.+.|+ ..|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~~---------~~~~~~~~~~~~~g-------g~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVSE---------DKIRETKDEVIAEG-------GTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCCH---------HHHHHHHHHHHHHT-------CCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCCH---------HHHHHHHHHHHhhC-------CceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 6899999987653 45567777777653 36789994 799999999999999999999 89999
Q ss_pred EEeCccccc
Q 044682 101 IFLDEGRKV 109 (755)
Q Consensus 101 V~~~~~~~~ 109 (755)
||+|+.++.
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999987753
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.28 E-value=0.00043 Score=54.91 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=40.4
Q ss_pred ccccccEEEEecceeeeEEEEeCHHHHHHHhCCCCeEEEEeCcccc
Q 044682 63 KKARDSISCSYGRHINGFAAILEEEHAQQLAKHPEVLSIFLDEGRK 108 (755)
Q Consensus 63 ~~~~~~i~~~y~~~~~g~s~~l~~~~~~~L~~~p~V~~V~~~~~~~ 108 (755)
+....++.++|. .+++++++|+++.++.|+++|+|.+|++|...+
T Consensus 19 ~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 19 LGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp GGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred HHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 345678999998 999999999999999999999999999998764
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.25 E-value=0.016 Score=63.78 Aligned_cols=69 Identities=22% Similarity=0.160 Sum_probs=56.8
Q ss_pred CCCccceEEEEecCCc-chhhHHHHHHcCccEEEEecCCCCCCC--CC-CCCCcccEEEeeHhhHHHHHHHHh
Q 044682 398 PKKINGKILLCMNHTH-GIDKSQLAAQAGAAGLILVNPKQLENE--SL-PLPYHLPTSLVEFDDAQSIIAYNN 466 (755)
Q Consensus 398 ~~~~~gkivl~~~~~~-~~~~~~~~~~~Ga~g~i~~~~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 466 (755)
..+++|||||++++.| +.+|..+++++||.|+|++++...... +. .....+|.+.|+..+++.|.+++.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3489999999999999 999999999999999999998632111 11 134679999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.19 E-value=0.077 Score=58.65 Aligned_cols=81 Identities=22% Similarity=0.150 Sum_probs=59.9
Q ss_pred CCCccceEEEEecCCcc----------hhh----HHHHHHcCccEEEEecCCCCCCC--------CCCCCCcccEEEeeH
Q 044682 398 PKKINGKILLCMNHTHG----------IDK----SQLAAQAGAAGLILVNPKQLENE--------SLPLPYHLPTSLVEF 455 (755)
Q Consensus 398 ~~~~~gkivl~~~~~~~----------~~~----~~~~~~~Ga~g~i~~~~~~~~~~--------~~~~~~~~p~~~i~~ 455 (755)
..+++|||||+.++.|. ..| ..++.++||.|+|++++...... .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 46899999999998761 233 35689999999999997442211 111235799999999
Q ss_pred hhHHHHHHHHhcCCCcEEEEecc
Q 044682 456 DDAQSIIAYNNSIKNPVASVSDV 478 (755)
Q Consensus 456 ~~g~~l~~~~~~~~~~~~~i~~~ 478 (755)
.+++.|...+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998876666666543
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.68 E-value=0.048 Score=62.82 Aligned_cols=68 Identities=15% Similarity=0.163 Sum_probs=54.0
Q ss_pred CCccceEEEEecCCc-chhhHHHHHHcCccEEEEecCCCCC------------------CCCCC----------------
Q 044682 399 KKINGKILLCMNHTH-GIDKSQLAAQAGAAGLILVNPKQLE------------------NESLP---------------- 443 (755)
Q Consensus 399 ~~~~gkivl~~~~~~-~~~~~~~~~~~Ga~g~i~~~~~~~~------------------~~~~~---------------- 443 (755)
-+++|||||++++.| +.+|..+++++||.|+|++++.... .+...
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 479999999999999 9999999999999999999975321 00000
Q ss_pred CCCcccEEEeeHhhHHHHHHHHh
Q 044682 444 LPYHLPTSLVEFDDAQSIIAYNN 466 (755)
Q Consensus 444 ~~~~~p~~~i~~~~g~~l~~~~~ 466 (755)
....||+..|+..+++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 02368999999999999987654
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.64 E-value=0.033 Score=64.87 Aligned_cols=70 Identities=24% Similarity=0.305 Sum_probs=55.2
Q ss_pred CCCccceEEEEecCCc-chhhHHHHHHcCccEEEEecCCCC----C---------------------------CCCCC--
Q 044682 398 PKKINGKILLCMNHTH-GIDKSQLAAQAGAAGLILVNPKQL----E---------------------------NESLP-- 443 (755)
Q Consensus 398 ~~~~~gkivl~~~~~~-~~~~~~~~~~~Ga~g~i~~~~~~~----~---------------------------~~~~~-- 443 (755)
..+++|||+|+++|.| +.+|..+++++||.|+|+|++... + +++.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 4579999999999999 999999999999999999986320 0 00000
Q ss_pred ---------------CCCcccEEEeeHhhHHHHHHHHhc
Q 044682 444 ---------------LPYHLPTSLVEFDDAQSIIAYNNS 467 (755)
Q Consensus 444 ---------------~~~~~p~~~i~~~~g~~l~~~~~~ 467 (755)
....||+..|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 024689999999999999987754
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.63 E-value=0.11 Score=46.43 Aligned_cols=51 Identities=24% Similarity=0.376 Sum_probs=44.7
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEec
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPE 728 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~ 728 (755)
.+.+.++.|+|+|+....|+.....| ++++|..-++ ++|++..++|+|.+.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~ 91 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQ 91 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCS
T ss_pred CeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcC
Confidence 57888999999999888888877654 7789999999 799999999999993
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=88.15 E-value=1.6 Score=39.79 Aligned_cols=54 Identities=11% Similarity=-0.046 Sum_probs=43.3
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecC----CceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGV----DGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~----~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
...+-+++|+|.|.....|++..... ..--++++|..-++ .+|++.+++|++.+
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYV 100 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECB
T ss_pred eeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEE
Confidence 45678889999999999999985421 11236778999999 89999999999986
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.53 E-value=0.59 Score=40.56 Aligned_cols=54 Identities=13% Similarity=0.208 Sum_probs=43.1
Q ss_pred ceEEEEEEEEecCCCCceEEEEEec-CCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEG-VDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~-~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
...+.+++++|.|+.+..|+..... +.+..++++|..-.+ ++|++++++|+|.+
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~ 80 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSS 80 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECC
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEEC
Confidence 4577889999999999999984321 123347788999889 79999999999998
No 51
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.27 E-value=0.3 Score=60.02 Aligned_cols=24 Identities=38% Similarity=0.549 Sum_probs=22.6
Q ss_pred CCCCCceEEEEEccCCCCCCcCcc
Q 044682 135 GRFGEDVIIGVIDSGVWPESKSFS 158 (755)
Q Consensus 135 ~~~G~gV~VgVIDtGid~~Hp~f~ 158 (755)
.+.|+||+|||+|||||+.+|.|.
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq 55 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLE 55 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSS
T ss_pred CCCCCccEEEEEeCCCCCCCCcce
Confidence 579999999999999999999996
No 52
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=83.53 E-value=0.61 Score=51.30 Aligned_cols=29 Identities=21% Similarity=0.352 Sum_probs=25.9
Q ss_pred CCccccccCCCCCCCCCCCCCCceeeCCCeEEeeecC
Q 044682 487 SPQMTFFSSRGPSTINPNIIKPDITAPGVEIIAAYSE 523 (755)
Q Consensus 487 ~~~~a~fSS~Gp~~~~~~~~KPDI~APG~~I~sa~~~ 523 (755)
.+.++.||++||.. ||+|||++|+++++.
T Consensus 183 ~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~ 211 (441)
T 1y9z_A 183 NLDHAAFSQYTDQV--------EISGPGEAILSTVTV 211 (441)
T ss_dssp TCCBCTTSCCCTTE--------EEEEECSSEEEECST
T ss_pred CCCCCccccCCCce--------EEEeccCCeeccccC
Confidence 46889999999876 999999999999874
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=80.00 E-value=5.8 Score=34.75 Aligned_cols=52 Identities=23% Similarity=0.303 Sum_probs=43.0
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 674 SVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 674 ~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
.-.+++.+.|....+.+|.++++...|+++. .|..+++ ++|+..++.|.+..
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~ 83 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWY-GKQTIQV-EPGEVLNLPMSLGA 83 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEE-SCCEEEE-CTTCEEEEEEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEe-CCCcEEE-CCCCEEEEEEEEEE
Confidence 4568888999999999999999987776654 2556888 89999999999987
No 54
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=72.42 E-value=1.2 Score=39.42 Aligned_cols=53 Identities=15% Similarity=0.150 Sum_probs=35.1
Q ss_pred EEEEEEEEecCCCCceEEEEEe-cCCceEEEEEceeEEEe-cCCeEEEEEEEEEe
Q 044682 675 VTITRRVKNVGTHNSSYEANVE-GVDGVSVVVEPNNLSFT-EYGEERTFKVTFTP 727 (755)
Q Consensus 675 ~~~~~tv~nv~~~~~~y~~~~~-~~~g~~v~v~p~~~~~~-~~g~~~~~~v~~~~ 727 (755)
..+...+++.+.+..+..+.++ .|.|++++++|..++++ ....+++|.|++..
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 4455666777643333444566 68899999999987764 44566777776655
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=71.17 E-value=9.2 Score=40.66 Aligned_cols=55 Identities=13% Similarity=0.024 Sum_probs=44.7
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceE----EEEEceeEEEecCCeEEEEEEEEEec
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVS----VVVEPNNLSFTEYGEERTFKVTFTPE 728 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~----v~v~p~~~~~~~~g~~~~~~v~~~~~ 728 (755)
...+-+++|+|+|.....|.+......... ++++|..-++ .+|++.+++|++.+.
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVS 104 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBC
T ss_pred CeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEEC
Confidence 467788899999999999999765433222 7889999999 899999999999883
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=63.26 E-value=20 Score=34.89 Aligned_cols=67 Identities=10% Similarity=-0.002 Sum_probs=44.6
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEeccCCCCCCCCCCeEEEEEEEE
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPERNVEPKPKAEKYIFGKLIWS 748 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~g~~~~~ 748 (755)
...+.+++++|.|+.+.+++... .|..+.+..+|.. + .+|++.+++|++.. ..... -+...++|+..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~~-~p~~~~~~~~~~~--I-~PG~~g~I~vt~~~----~~~~~-~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVVS-LPSFVSLDDRAFR--L-QAREPRELNLSLAV----PRNMP-PGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEEE-CCTTEECSCCEEE--E-CSSSCEEEEEEECC----CTTCC-SEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEecc-CCCceEeeeCcce--e-CCCCceEEEEEEcc----hhccc-CCceeeEEEEE
Confidence 45667889999998887777643 3666665444444 4 78999999999988 22222 24445556654
No 57
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=63.09 E-value=33 Score=29.87 Aligned_cols=50 Identities=8% Similarity=0.088 Sum_probs=42.0
Q ss_pred EEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 675 VTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 675 ~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
.+.+.+|+|.++....|++.-..|.- ..|.|..=.+ ++|++.++.|+..+
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~--YrVrP~~G~I-~Pg~~~~I~I~~q~ 74 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEH--YRVRPVYGFV-DAKGKSKLDINRLP 74 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTT--EEEECSEEEE-CTTCEEEEEEEECS
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 36788899999989999998888866 5667887666 89999999999987
No 58
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=59.30 E-value=28 Score=40.47 Aligned_cols=55 Identities=15% Similarity=0.139 Sum_probs=36.5
Q ss_pred ceEEEEEEEEecCCCCceEEEE--EecCCce------EEEEEceeEEEecCCeEEEEEEEEEecc
Q 044682 673 ESVTITRRVKNVGTHNSSYEAN--VEGVDGV------SVVVEPNNLSFTEYGEERTFKVTFTPER 729 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~--~~~~~g~------~v~v~p~~~~~~~~g~~~~~~v~~~~~~ 729 (755)
...+++++|||+|+.+..-.+. +..|.+. ++. --.++.+ ++||+++++++++..+
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~-gF~kv~L-~pGes~~V~~~l~~~~ 675 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLR-GFAKLNL-TPGQSGTATFNIRRRD 675 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEE-EEEEEEE-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhh-hccccee-CCCCeEEEEEEEcHHH
Confidence 3568999999999876655554 3444321 111 1233456 8999999999998843
No 59
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=58.72 E-value=26 Score=30.91 Aligned_cols=52 Identities=19% Similarity=0.297 Sum_probs=44.2
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
...+-.++|+|.++....|++.-..|.- ..|.|..=.+ ++|++..+.|++.+
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECc
Confidence 4567889999999989999999888866 5667888767 89999999999987
No 60
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=57.30 E-value=42 Score=29.73 Aligned_cols=52 Identities=25% Similarity=0.243 Sum_probs=34.9
Q ss_pred CceEEEEEEEEecCCC-CceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 672 NESVTITRRVKNVGTH-NSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 672 ~~~~~~~~tv~nv~~~-~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
+...+++.+|+|.|.. ...|++.+.. .|-.+.-. .+.+ .+|++++|++++.+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyv-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYI-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEE-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEE-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 3678999999999964 4667776654 34444322 2346 67888877777655
No 61
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.02 E-value=41 Score=28.87 Aligned_cols=49 Identities=12% Similarity=0.123 Sum_probs=41.6
Q ss_pred EEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 676 TITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 676 ~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
+-+.+|+|.++....|++.-..|.- ..|.|..=.+ ++|++.++.|+..+
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~--y~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNE--YRIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSS--EEEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCc--eEEcCCceEE-CCCCeEEEEEEeCC
Confidence 4688899999999999999888876 5667888767 89999999999887
No 62
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=54.40 E-value=33 Score=30.23 Aligned_cols=51 Identities=14% Similarity=0.201 Sum_probs=43.1
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 674 SVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 674 ~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
..+-..+|+|.++....|++.-..|.- ..|.|..=.+ ++|++..+.|++..
T Consensus 26 ~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 26 KHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp CCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 455678899999999999999988876 5667888777 79999999999887
No 63
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=52.89 E-value=31 Score=31.57 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=43.4
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 674 SVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 674 ~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
..+-.++|+|..+....|++.-..|.- ..|.|..=.+ .+|++.++.|++..
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~ 86 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHG 86 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECS
T ss_pred eEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecC
Confidence 445688999999989999999888876 5667888777 89999999999987
No 64
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=47.56 E-value=35 Score=39.69 Aligned_cols=70 Identities=16% Similarity=0.283 Sum_probs=43.7
Q ss_pred CCCCCCCeEEeecC-----CceEEEEEEEEecCCCCceEEE--EEecCCc-e-----EEEEEceeE-EEecCCeEEEEEE
Q 044682 658 ILDFNYPTIAIPDL-----NESVTITRRVKNVGTHNSSYEA--NVEGVDG-V-----SVVVEPNNL-SFTEYGEERTFKV 723 (755)
Q Consensus 658 ~~~ln~psi~~~~~-----~~~~~~~~tv~nv~~~~~~y~~--~~~~~~g-~-----~v~v~p~~~-~~~~~g~~~~~~v 723 (755)
.+-|.|.+|...++ .++.+++++|||+|+.+..-.+ -+..|.+ + ++. --.++ .+ ++||++++++
T Consensus 595 G~GLSYTtF~ys~~~~~~~~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF~kv~~L-~pGes~~V~~ 672 (721)
T 2x41_A 595 GYGLSYTTFEYSDLNVSFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELK-AFHKTRLL-NPGESEEVVL 672 (721)
T ss_dssp TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEE-EEEECCCB-CTTCEEEEEE
T ss_pred CCCCCcceeEeeceEeecCCCeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhh-cccccccC-CCCCeEEEEE
Confidence 34566666665443 2468899999999976554444 3455532 1 111 11233 45 7999999999
Q ss_pred EEEecc
Q 044682 724 TFTPER 729 (755)
Q Consensus 724 ~~~~~~ 729 (755)
+++..+
T Consensus 673 ~l~~~~ 678 (721)
T 2x41_A 673 EIPVRD 678 (721)
T ss_dssp EEEGGG
T ss_pred EECHHH
Confidence 999854
No 65
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=46.55 E-value=36 Score=30.89 Aligned_cols=52 Identities=19% Similarity=0.292 Sum_probs=43.6
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
...+-.++|+|.++....|++.-..|.- ..|.|..=.+ ++|++..+.|++.+
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQP 82 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECC
Confidence 3456788999999989999999998876 5567888667 89999999999987
No 66
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=46.47 E-value=41 Score=39.79 Aligned_cols=67 Identities=21% Similarity=0.393 Sum_probs=43.9
Q ss_pred CCCCCCCeEEee--cC---CceEEEEEEEEecC-CCCceEEEE--EecCCc-e-----EEEEEceeEEEecCCeEEEEEE
Q 044682 658 ILDFNYPTIAIP--DL---NESVTITRRVKNVG-THNSSYEAN--VEGVDG-V-----SVVVEPNNLSFTEYGEERTFKV 723 (755)
Q Consensus 658 ~~~ln~psi~~~--~~---~~~~~~~~tv~nv~-~~~~~y~~~--~~~~~g-~-----~v~v~p~~~~~~~~g~~~~~~v 723 (755)
.+-|.|.+|... ++ .+..+++++|||+| +.+..-.+. +..|.+ + ++. --.++.+ ++||++++++
T Consensus 715 G~GLSYTtF~ys~~~l~v~~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~-gF~kv~L-~pGes~~V~~ 792 (845)
T 3abz_A 715 GYGLSYTTFELDISDFKVTDDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELK-GFEKVHL-EPGEKKTVNI 792 (845)
T ss_dssp TCCBCSSCEEEEEEEEEECSSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEE-EEEEEEE-CTTCEEEEEE
T ss_pred cCCCcceeEEEecccccccCCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheec-cceeEEE-CCCCEEEEEE
Confidence 456777777776 44 25688999999999 765555543 344432 1 111 1123456 8999999999
Q ss_pred EEE
Q 044682 724 TFT 726 (755)
Q Consensus 724 ~~~ 726 (755)
+++
T Consensus 793 ~l~ 795 (845)
T 3abz_A 793 DLE 795 (845)
T ss_dssp EEE
T ss_pred EeC
Confidence 999
No 67
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=44.68 E-value=82 Score=30.45 Aligned_cols=52 Identities=15% Similarity=0.294 Sum_probs=35.9
Q ss_pred ceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
...+.+++++|+|+.....+ .++..-|... +++..-.+ .+||+.+++|++.+
T Consensus 134 ~~~~~~f~i~N~G~~pL~I~-~v~~scgct~-~~~~~~~i-~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLRLH-SVTTRNPALT-AVPDRTEI-KPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEEEE-EEEECSTTEE-EEESCSEE-CTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEEEE-EEEeCCCCEe-eecCCccC-CCCCEEEEEEEEec
Confidence 56788999999998665554 3343444332 23344456 79999999999988
No 68
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=34.04 E-value=29 Score=26.33 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=26.8
Q ss_pred cchhhhHHHHHHHHHhhCCCCCHHHHHHHHHhccc
Q 044682 546 SMSTPHISGIAGLLKTLHPDWSPAAIKSAIMTTAT 580 (755)
Q Consensus 546 SmAaP~VAG~aALl~q~~P~~sp~~ik~~L~~TA~ 580 (755)
|-..|..--.+..|++.+|+++...|+.+|...-.
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~g 37 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRG 37 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCC
Confidence 33334445567789999999999999999987743
No 69
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=33.80 E-value=97 Score=25.97 Aligned_cols=51 Identities=20% Similarity=0.302 Sum_probs=30.9
Q ss_pred ceEEEEEEEEecCCCCce----EEEEE---------ecCCceEEEEEc-eeEEEecCCeEEEEEEE
Q 044682 673 ESVTITRRVKNVGTHNSS----YEANV---------EGVDGVSVVVEP-NNLSFTEYGEERTFKVT 724 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~----y~~~~---------~~~~g~~v~v~p-~~~~~~~~g~~~~~~v~ 724 (755)
+..+++++|+|.|+.+-- |++-- ....|..+.+-. ..+.| +||+++++++.
T Consensus 18 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~r~V~LV 82 (101)
T 4ep8_B 18 GRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRF-EPGQKREVELV 82 (101)
T ss_dssp TCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEE-CTTCEEEEEEE
T ss_pred CCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEee-CCCCeEEEEEE
Confidence 567889999999985421 22110 011366666521 24677 78999888764
No 70
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=32.45 E-value=79 Score=35.49 Aligned_cols=62 Identities=18% Similarity=0.126 Sum_probs=43.3
Q ss_pred CCCeEEeecCCceEEEEEEEEecCCCCceE-EEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 662 NYPTIAIPDLNESVTITRRVKNVGTHNSSY-EANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 662 n~psi~~~~~~~~~~~~~tv~nv~~~~~~y-~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
..|.+++..- ++.+++.+|+|-+..+..- ++++..|.+.+++. ....+ ++|++.+++|+|++
T Consensus 363 ~~~~~~~~~g-~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~ 425 (601)
T 1w8o_A 363 TIPDVALEPG-QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITV 425 (601)
T ss_dssp ECCCEEECTT-CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEEC
T ss_pred cCccceecCC-ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEec
Confidence 4577777753 6889999999965422211 44567788888776 34555 67899988888888
No 71
>2l04_A Major tail protein V; bacteriophage lambda, phage tail, GPV, IG-like domain, viral; NMR {Enterobacteria phage lambda}
Probab=29.83 E-value=83 Score=25.97 Aligned_cols=24 Identities=33% Similarity=0.578 Sum_probs=20.5
Q ss_pred EEEEceeEEEecCCeEEEEEEEEEe
Q 044682 703 VVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 703 v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
|++.|..+++ ..|++.++++++.+
T Consensus 9 i~l~~~~~~l-~vG~t~~L~atv~P 32 (91)
T 2l04_A 9 MTVTPASTSV-VKGQSTTLTVAFQP 32 (91)
T ss_dssp EEEECCCEEE-ETTCEEEEEEEECC
T ss_pred EEEeCCceEE-EcCCEEEEEEEEec
Confidence 6677888999 68999999888888
No 72
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.72 E-value=2.8e+02 Score=24.10 Aligned_cols=55 Identities=20% Similarity=0.241 Sum_probs=35.9
Q ss_pred CceEEEEEEEEecCCCCce--------EEEEEecCCceEEE-------E--EceeEEEecCCeEEEEEEEEEe
Q 044682 672 NESVTITRRVKNVGTHNSS--------YEANVEGVDGVSVV-------V--EPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 672 ~~~~~~~~tv~nv~~~~~~--------y~~~~~~~~g~~v~-------v--~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
++...++++|+|.++.+.+ |.+.+....|-.|- + -....++ ++||+++|++++..
T Consensus 17 g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~ 88 (120)
T 3isy_A 17 PEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE 88 (120)
T ss_dssp SSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS
T ss_pred CCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC
Confidence 3578899999999864433 33444444554443 1 1233567 89999999998883
No 73
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=29.65 E-value=2.5e+02 Score=23.59 Aligned_cols=65 Identities=9% Similarity=0.059 Sum_probs=45.0
Q ss_pred eEEeecCCceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEeccCCCCCCCCCCeEEEE
Q 044682 665 TIAIPDLNESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPERNVEPKPKAEKYIFGK 744 (755)
Q Consensus 665 si~~~~~~~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~g~ 744 (755)
.++|.....-..++++|+|-..+...|.-....|.- ++ +.+ ..-++-+|+|.+... ..|..|.
T Consensus 35 vlsV~F~~~~~~vTItItNe~TG~~VYs~~~s~p~~--i~-----IdL-nge~sG~Y~IeI~~~---------~~~LtG~ 97 (101)
T 3sd2_A 35 ILNVSFGRAKDYAIITVTNKATGEIVHSKTYHNTSI--VM-----IDM-SSCEKGEYTIHIILN---------DCLLEGT 97 (101)
T ss_dssp EEEEEESSCCSCEEEEEEETTTCCEEEEEEESSCSE--EE-----EEC-TTSCSEEEEEEEEET---------TEEEEEE
T ss_pred EEEEEeccCCCcEEEEEEECCCCcEEEEEeccCCcE--EE-----EEc-CCCcCceEEEEEEeC---------CcEEEEE
Confidence 555555555667899999987778999988887542 22 233 344578899998882 5677777
Q ss_pred EE
Q 044682 745 LI 746 (755)
Q Consensus 745 ~~ 746 (755)
.+
T Consensus 98 F~ 99 (101)
T 3sd2_A 98 FT 99 (101)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 74
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=28.94 E-value=1.2e+02 Score=26.56 Aligned_cols=51 Identities=24% Similarity=0.202 Sum_probs=30.9
Q ss_pred ceEEEEEEEEecCCCCce----EEEEEecC---------CceEEEEEc-eeEEEecCCeEEEEEEE
Q 044682 673 ESVTITRRVKNVGTHNSS----YEANVEGV---------DGVSVVVEP-NNLSFTEYGEERTFKVT 724 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~----y~~~~~~~---------~g~~v~v~p-~~~~~~~~g~~~~~~v~ 724 (755)
+..+++++|+|.|+.+-- |++--..| .|..+.+-. ..+.| +||+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ubp_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 567789999999985421 22110011 266666522 24678 78999887764
No 75
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=28.94 E-value=1.2e+02 Score=26.56 Aligned_cols=51 Identities=24% Similarity=0.202 Sum_probs=30.9
Q ss_pred ceEEEEEEEEecCCCCce----EEEEEecC---------CceEEEEEc-eeEEEecCCeEEEEEEE
Q 044682 673 ESVTITRRVKNVGTHNSS----YEANVEGV---------DGVSVVVEP-NNLSFTEYGEERTFKVT 724 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~----y~~~~~~~---------~g~~v~v~p-~~~~~~~~g~~~~~~v~ 724 (755)
+..+++++|+|.|+.+-- |++--..| .|..+.+-. ..+.| +||+++++++.
T Consensus 24 gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRF-EPG~~k~V~LV 88 (126)
T 4ac7_B 24 GREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARF-EPGEEMEVELT 88 (126)
T ss_dssp TSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEE-CTTCEEEEEEE
T ss_pred CCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEee-CCCCeEEEEEE
Confidence 567789999999985421 22110011 266666522 24678 78999887764
No 76
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=27.61 E-value=42 Score=30.83 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=26.3
Q ss_pred eccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 044682 542 CFGTSMSTPHISGIAGLLKTLHPDWSPAAIKS 573 (755)
Q Consensus 542 ~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~ 573 (755)
+.|-| =|+.|-|++|||.+.+-..||+||.+
T Consensus 79 F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~ 109 (155)
T 1ni7_A 79 FFGDS-EGRIVRGLLAVLLTAVEGKTAAELQA 109 (155)
T ss_dssp CEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 34555 47899999999999999999999865
No 77
>3lyw_A YBBR family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.90A {Desulfitobacterium hafniense} PDB: 2kpu_A 2l5n_A
Probab=25.70 E-value=47 Score=27.47 Aligned_cols=39 Identities=13% Similarity=0.296 Sum_probs=30.4
Q ss_pred eEEEEEEEEecCCCCceEEEEEecCCceEE-EEEceeEEE
Q 044682 674 SVTITRRVKNVGTHNSSYEANVEGVDGVSV-VVEPNNLSF 712 (755)
Q Consensus 674 ~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v-~v~p~~~~~ 712 (755)
.....+.++.+..+..+|.+.+..|.|+++ .++|..+++
T Consensus 42 di~A~VDLsg~~~G~~~~~V~v~~P~G~~lv~vsP~~V~~ 81 (90)
T 3lyw_A 42 ELFAYVDLSGSEPGEHDYEVKVEPIPNIKIVEISPRVVTL 81 (90)
T ss_dssp TCEEEEECTTCCSEEEEEECEECCCTTEEEEEEESSEEEE
T ss_pred HEEEEEECcCCCCCcEeEEEEEECCCCCEEEEEccceEEE
Confidence 345567778887777888888999999875 688988776
No 78
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=25.49 E-value=3.1e+02 Score=23.28 Aligned_cols=68 Identities=13% Similarity=0.243 Sum_probs=46.4
Q ss_pred EEeecCCceEEEEEEEEecCCCCceEEEEEecCCceEEEEEceeEEEecCCeEEEEEEEEEeccCCCCCCCCCCeEEEEE
Q 044682 666 IAIPDLNESVTITRRVKNVGTHNSSYEANVEGVDGVSVVVEPNNLSFTEYGEERTFKVTFTPERNVEPKPKAEKYIFGKL 745 (755)
Q Consensus 666 i~~~~~~~~~~~~~tv~nv~~~~~~y~~~~~~~~g~~v~v~p~~~~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~g~~ 745 (755)
+.|.....-..++++|+|...+...|.-.+..+.+-.+.+ .+ ..-.+-.+++.++. .. ..|+.|..
T Consensus 40 L~I~F~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I-----~L-~~~~~G~Y~L~i~~-------~~-~~~l~G~F 105 (108)
T 3d33_A 40 LTLKNASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITI-----SI-ANFPAEEYKLEITG-------TP-SGHLTGYF 105 (108)
T ss_dssp EEEEESSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEE-----EC-TTSCSEEEEEEEEE-------ES-SCEEEEEE
T ss_pred EEEEECCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEE-----Ec-CCccCceEEEEEEe-------CC-CCEEEEEE
Confidence 4444444456789999987777899999998776666655 23 22235678888887 22 67888876
Q ss_pred EE
Q 044682 746 IW 747 (755)
Q Consensus 746 ~~ 747 (755)
..
T Consensus 106 ~i 107 (108)
T 3d33_A 106 TK 107 (108)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 79
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=23.53 E-value=40 Score=30.41 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=27.6
Q ss_pred eeeccccchhhhHHHHHHHHHhhCCCCCHHHHHH
Q 044682 540 NACFGTSMSTPHISGIAGLLKTLHPDWSPAAIKS 573 (755)
Q Consensus 540 ~~~sGTSmAaP~VAG~aALl~q~~P~~sp~~ik~ 573 (755)
..+.|-| =|+.|-|++|||.+.+-..||+||.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 4455666 47899999999999999999999854
No 80
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=22.98 E-value=4.1e+02 Score=26.27 Aligned_cols=52 Identities=17% Similarity=0.230 Sum_probs=37.7
Q ss_pred ceEEEEEEEEecCCCCceEEEE--EecCC--------ceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEAN--VEGVD--------GVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~--~~~~~--------g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
++...+++|+|.++ ..|.+. ++... ...+.++|..+++ ++|+++.+.|..+.
T Consensus 42 ~~k~~sl~l~N~~~--~P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~ 103 (257)
T 3q48_A 42 SEREVTLRVSNTSG--TPVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLK 103 (257)
T ss_dssp TCSEEEEEEEECSS--SCEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCC--CeEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECC
Confidence 45668899999875 356654 33211 2348899999999 79999999997655
No 81
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=21.13 E-value=4.2e+02 Score=25.44 Aligned_cols=52 Identities=12% Similarity=0.172 Sum_probs=37.1
Q ss_pred ceEEEEEEEEecCCCCceEEEE--EecC---C--ceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSYEAN--VEGV---D--GVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y~~~--~~~~---~--g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
++..++++|+|.++ ..|.+. ++.- . ..-+.++|..+++ ++|+++.+.|..+.
T Consensus 26 ~~k~~sl~l~N~~~--~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 26 DAAGVMVSVKNTQD--YPVLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAG 84 (218)
T ss_dssp TCSCEEEEEECCSS--SCEEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECS
T ss_pred CCcEEEEEEEcCCC--CCEEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecC
Confidence 45678889999874 456654 3221 1 2237889999999 79999999997765
No 82
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=20.38 E-value=2.3e+02 Score=29.54 Aligned_cols=51 Identities=24% Similarity=0.314 Sum_probs=32.0
Q ss_pred ceEEEEEEEEecCCCCceE---EE-EE---e---------cCC------ceEEEEEceeEEEecCCeEEEEEEEEEe
Q 044682 673 ESVTITRRVKNVGTHNSSY---EA-NV---E---------GVD------GVSVVVEPNNLSFTEYGEERTFKVTFTP 727 (755)
Q Consensus 673 ~~~~~~~tv~nv~~~~~~y---~~-~~---~---------~~~------g~~v~v~p~~~~~~~~g~~~~~~v~~~~ 727 (755)
.+.+++++|||.|+....- .. .+ . .|. | ++|+|++- + .+||+++++|+++-
T Consensus 264 R~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~g--L~vsd~~p-I-~PGETr~~~v~a~d 336 (382)
T 1yew_A 264 RAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDG--LSVSDNSP-L-APGETRTVDVTASD 336 (382)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTC--EEESCCSC-B-CTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCC--ceeCCCCC-c-CCCceeEEEEEeeh
Confidence 6788999999999754221 11 00 0 121 3 35555552 3 68999999999874
Done!