BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044685
(82 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147823105|emb|CAN66332.1| hypothetical protein VITISV_000600 [Vitis vinifera]
Length = 463
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
MI PQ LIF HAAQF TV D RF V+GWLE+GL
Sbjct: 5 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGL 39
>gi|224130614|ref|XP_002328333.1| predicted protein [Populus trichocarpa]
gi|222838048|gb|EEE76413.1| predicted protein [Populus trichocarpa]
Length = 496
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+I PQPLIF HAAQF TV+D RF V+ WLE+GL
Sbjct: 141 VIDPQPLIFDHAAQFFTVSDPRFSELVDDWLEKGL 175
>gi|296087896|emb|CBI35179.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
MI PQ LIF HAAQF TV D RF V+GWLE+GL
Sbjct: 117 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGL 151
>gi|225463946|ref|XP_002268010.1| PREDICTED: uncharacterized protein LOC100241002 [Vitis vinifera]
Length = 467
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 26/35 (74%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
MI PQ LIF HAAQF TV D RF V+GWLE+GL
Sbjct: 117 MIDPQSLIFDHAAQFFTVGDPRFAQLVDGWLEKGL 151
>gi|255580905|ref|XP_002531271.1| conserved hypothetical protein [Ricinus communis]
gi|223529104|gb|EEF31084.1| conserved hypothetical protein [Ricinus communis]
Length = 467
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 28/35 (80%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+I PQPL+F HAAQF TV+D +F V+GWLE+GL
Sbjct: 134 VIDPQPLVFDHAAQFFTVSDPQFAQLVDGWLEKGL 168
>gi|297828968|ref|XP_002882366.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
gi|297328206|gb|EFH58625.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+I PQ LIF HAAQF T +D RF V+GWLE+GL
Sbjct: 136 IIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGL 170
>gi|18396966|ref|NP_566235.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
gi|6175169|gb|AAF04895.1|AC011437_10 unknown protein [Arabidopsis thaliana]
gi|15215628|gb|AAK91359.1| AT3g04650/F7O18_13 [Arabidopsis thaliana]
gi|28416461|gb|AAO42761.1| At3g04650/F7O18_13 [Arabidopsis thaliana]
gi|332640593|gb|AEE74114.1| FAD/NAD(P)-binding oxidoreductase domain-containing protein
[Arabidopsis thaliana]
Length = 486
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 1 MIGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+I PQ LIF HAAQF T +D RF V+GWLE+GL
Sbjct: 136 IIEPQGLIFDHAAQFFTADDSRFIKLVDGWLEKGL 170
>gi|449443231|ref|XP_004139383.1| PREDICTED: uncharacterized protein LOC101219713 [Cucumis sativus]
Length = 545
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+GP+PL+F HAAQF TV D +F V+GWL L
Sbjct: 145 LGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADL 178
>gi|449483109|ref|XP_004156495.1| PREDICTED: uncharacterized protein LOC101226129 [Cucumis sativus]
Length = 536
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%)
Query: 2 IGPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
+GP+PL+F HAAQF TV D +F V+GWL L
Sbjct: 145 LGPEPLMFDHAAQFFTVTDNQFAQLVDGWLAADL 178
>gi|226530158|ref|NP_001140386.1| uncharacterized protein LOC100272440 [Zea mays]
gi|223973745|gb|ACN31060.1| unknown [Zea mays]
Length = 505
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
G + L+F HAAQF T +D RF VN WL+RGL
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGL 150
>gi|414868815|tpg|DAA47372.1| TPA: hypothetical protein ZEAMMB73_111446 [Zea mays]
Length = 210
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
G + L+F HAAQF T +D RF VN WL+RGL
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGL 150
>gi|414868816|tpg|DAA47373.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 384
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
G + L+F HAAQF T +D RF VN WL+RGL
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGL 150
>gi|414868817|tpg|DAA47374.1| TPA: hypothetical protein ZEAMMB73_111446, partial [Zea mays]
Length = 266
Score = 42.7 bits (99), Expect = 0.026, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
G + L+F HAAQF T +D RF VN WL+RGL
Sbjct: 118 GGKQLVFDHAAQFFTASDERFQRLVNEWLDRGL 150
>gi|242086110|ref|XP_002443480.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
gi|241944173|gb|EES17318.1| hypothetical protein SORBIDRAFT_08g020230 [Sorghum bicolor]
Length = 507
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 3 GPQPLIFGHAAQFITVNDYRFHPSVNGWLERGL 35
G + L+F HAAQF T +D RF V+ WL+RGL
Sbjct: 152 GGEQLVFDHAAQFFTASDERFQSMVDEWLDRGL 184
>gi|357116570|ref|XP_003560053.1| PREDICTED: uncharacterized protein LOC100824134 [Brachypodium
distachyon]
Length = 477
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V W+ERGL
Sbjct: 125 LVFDHAAQFFTASDERFQKLVEEWVERGL 153
>gi|326493132|dbj|BAJ85027.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 469
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V+ W+E+GL
Sbjct: 118 LVFDHAAQFFTASDRRFQKLVDEWVEKGL 146
>gi|108862915|gb|ABG22072.1| expressed protein [Oryza sativa Japonica Group]
Length = 456
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V+ W+++GL
Sbjct: 104 LVFDHAAQFFTASDERFKRVVDEWMDKGL 132
>gi|222617407|gb|EEE53539.1| hypothetical protein OsJ_36748 [Oryza sativa Japonica Group]
Length = 481
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V+ W+++GL
Sbjct: 129 LVFDHAAQFFTASDERFKRVVDEWMDKGL 157
>gi|115489414|ref|NP_001067194.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|77556443|gb|ABA99239.1| expressed protein [Oryza sativa Japonica Group]
gi|113649701|dbj|BAF30213.1| Os12g0597400 [Oryza sativa Japonica Group]
gi|215701342|dbj|BAG92766.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 497
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V+ W+++GL
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGL 173
>gi|125537277|gb|EAY83765.1| hypothetical protein OsI_38983 [Oryza sativa Indica Group]
Length = 497
Score = 37.7 bits (86), Expect = 0.85, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L+F HAAQF T +D RF V+ W+++GL
Sbjct: 145 LVFDHAAQFFTASDERFKRVVDEWMDKGL 173
>gi|406832394|ref|ZP_11091988.1| DNA photolyase FAD-binding protein [Schlesneria paludicola DSM
18645]
Length = 368
Score = 35.8 bits (81), Expect = 3.1, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 7 LIFGHAAQFITVNDYRFHPSVNGWLERGL 35
L F H AQ+ TV D F P V W+ERG+
Sbjct: 88 LEFDHGAQYFTVTDPLFEPLVQSWIERGI 116
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.329 0.142 0.491
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,390,559,590
Number of Sequences: 23463169
Number of extensions: 46859743
Number of successful extensions: 117191
Number of sequences better than 100.0: 22
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 117169
Number of HSP's gapped (non-prelim): 22
length of query: 82
length of database: 8,064,228,071
effective HSP length: 53
effective length of query: 29
effective length of database: 6,820,680,114
effective search space: 197799723306
effective search space used: 197799723306
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 69 (31.2 bits)