BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044687
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q52532|MHPC_PSESP 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Pseudomonas sp. GN=mhpC PE=3 SV=1
Length = 283
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 46 DAIFEDVKQREPANDEGALDAFVSIVTGPSG-PNPVQLMPSISIPVLVLWGDEDPFTPLD 104
+ FE++ +R P + L FV + G N L+P++++P +++WG +D F PLD
Sbjct: 187 NGRFENMMRR-PEH----LTNFVESLKASGGRANYAHLLPTLTMPTMIIWGRDDRFVPLD 241
>sp|A6TAC7|MHPC_KLEP7 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=mhpC PE=3 SV=1
Length = 288
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
Query: 37 FLLKQRPIADAIFEDVKQREPANDEGALDAFVSIVTGPSGPNPVQL------MPSISIPV 90
F+ R + +A+FE + + LD FV + NP Q + IS P
Sbjct: 177 FVFDTRDLTEALFE-ARLNNMLSRRDHLDNFVKSLE----ANPKQFPDFGPRLGEISAPT 231
Query: 91 LVLWGDEDPFTPLD 104
L++WG D F P+D
Sbjct: 232 LIVWGRNDRFVPMD 245
>sp|A4JPX5|MHPC_BURVG 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia vietnamiensis (strain G4 / LMG
22486) GN=mhpC PE=3 SV=1
Length = 288
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 45 ADAIFEDVKQREPANDEGALDAFVSIVTGPSGPNPVQL------MPSISIPVLVLWGDED 98
A + E++ Q N G D + V + NP Q + I P LV+WG +D
Sbjct: 182 ASTMTEELMQTRLENMLGRRDHLENFVKSLT-ANPKQFPDYGHRLSEIKAPALVIWGRDD 240
Query: 99 PFTPLD 104
F P+D
Sbjct: 241 RFVPMD 246
>sp|Q55921|PRXC_SYNY3 Putative non-heme chloroperoxidase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0314 PE=3 SV=1
Length = 276
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 28 LFPLLWFIDFLLKQRPIADAIFEDVKQREPANDEGALDAFVSIVTGPSGPNPVQLMPSIS 87
F + +D LL +R +AI A+ +G LD S +T + +P I
Sbjct: 163 FFKEFFNVDVLLGERISNEAIQASWNVAAGASAKGTLDCVPSWLT-----DFRDDLPRID 217
Query: 88 IPVLVLWGDEDPFTPLDRPVGR 109
+P L++ GD D PL+ R
Sbjct: 218 VPTLIIHGDADRILPLESTAAR 239
>sp|B2ASU5|KATG_PODAN Catalase-peroxidase OS=Podospora anserina (strain S / ATCC MYA-4624
/ DSM 980 / FGSC 10383) GN=katG PE=3 SV=1
Length = 755
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 46 DAIFEDVKQREPANDEGALDAFV----SIVTGPSGPNPVQLMPSISIPVLVLWGDEDPFT 101
D FE + +R + + DAF ++ GP L P I VL LW EDP
Sbjct: 398 DPGFEKISRRFLEHTDQFADAFARAWFKLLHRDMGPRSRWLGPEIPSEVL-LW--EDPLP 454
Query: 102 PLDRPV 107
PLD PV
Sbjct: 455 PLDHPV 460
>sp|P06186|PRGR_RABIT Progesterone receptor OS=Oryctolagus cuniculus GN=PGR PE=2 SV=1
Length = 930
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 51 DVKQREPANDEGALDAFVSIVTGPSGPNPVQLMPSI--SIPVLVLWGDEDPFTPLDRPVG 108
D R P D G LD+ + + PSGP P+ +I L+G + P P P
Sbjct: 99 DSSSRPPEKDSGLLDSVLDTLLAPSGPGQSHASPATCEAISPWCLFGPDLPEDPRAAPAT 158
Query: 109 R 109
+
Sbjct: 159 K 159
>sp|B2JQW2|MHPC_BURP8 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate
hydrolase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=mhpC PE=3 SV=1
Length = 288
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 10/47 (21%)
Query: 64 LDAFVSIVTGPSGPNPVQL------MPSISIPVLVLWGDEDPFTPLD 104
L+ FV +T NP Q + I P LV+WG +D F PLD
Sbjct: 204 LENFVKSLT----ANPKQFPDYGHRLNEIKAPALVIWGRDDRFVPLD 246
>sp|Q7VM56|LNT_HAEDU Apolipoprotein N-acyltransferase OS=Haemophilus ducreyi (strain
35000HP / ATCC 700724) GN=lnt PE=3 SV=1
Length = 505
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 1 LILDFLDEVVRKPTVLIGIGDDWRIKLLFPL----LWFIDFLLKQRPIADAIFE-DVKQR 55
L+ +L ++V+ PT I + + F L L F+ ++ P+ A+ + +++Q+
Sbjct: 171 LLSSYLVDIVKNPTRKIATFTKIAVIIGFSLASNLLQFVQIDQQKPPVKVALIQANIEQQ 230
Query: 56 ---EPANDEGALDAFVSIVTGPSGPNPVQLMPSISIPVL 91
+PA+ E L + ++ N V ++P +IP L
Sbjct: 231 LKWDPAHFENTLRTYQQLINSSLAENEVIILPESAIPAL 269
>sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168)
GN=yugF PE=3 SV=1
Length = 273
Score = 28.9 bits (63), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 22/48 (45%)
Query: 57 PANDEGALDAFVSIVTGPSGPNPVQLMPSISIPVLVLWGDEDPFTPLD 104
P DE A + G + + ++ P L++WG+ED P++
Sbjct: 185 PFQDEQIFKAMTRFIRHREGDLEPEQLKKMNKPALLIWGEEDRIVPME 232
>sp|A7X8D4|PRGR_TRAOB Progesterone receptor OS=Trachypithecus obscurus GN=PGR PE=3 SV=1
Length = 933
Score = 28.9 bits (63), Expect = 9.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 1/52 (1%)
Query: 55 REPANDEGALDAFVSIVTGPSGPNPVQLMPSISIPVLVLWGDEDPFTPLDRP 106
R P D G LD+ + + PSGP Q P + V W P P D P
Sbjct: 102 RPPGKDSGLLDSVLDTLLAPSGPGQSQPSPP-ACEVTSSWCLFGPELPEDPP 152
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.148 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,411,450
Number of Sequences: 539616
Number of extensions: 1936187
Number of successful extensions: 3508
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3501
Number of HSP's gapped (non-prelim): 19
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)