Query 044687
Match_columns 111
No_of_seqs 158 out of 978
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 05:47:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 98.9 5.3E-09 1.1E-13 75.9 6.9 28 78-105 225-252 (294)
2 PLN02679 hydrolase, alpha/beta 98.9 1.4E-08 3.1E-13 76.4 8.3 43 62-104 267-309 (360)
3 KOG1454 Predicted hydrolase/ac 98.6 1.4E-08 3.1E-13 76.0 2.5 46 60-105 234-282 (326)
4 PLN02578 hydrolase 98.6 1.5E-07 3.2E-12 70.6 6.4 47 59-105 264-314 (354)
5 TIGR02240 PHA_depoly_arom poly 98.3 5.1E-07 1.1E-11 65.0 2.9 25 81-105 201-225 (276)
6 PRK03592 haloalkane dehalogena 98.2 5.6E-06 1.2E-10 60.0 7.2 23 81-103 222-244 (295)
7 TIGR03343 biphenyl_bphD 2-hydr 98.0 5.3E-05 1.1E-09 54.1 8.8 27 79-105 215-241 (282)
8 PRK11126 2-succinyl-6-hydroxy- 97.9 0.00017 3.6E-09 50.4 9.9 24 78-101 179-202 (242)
9 PRK07581 hypothetical protein; 97.9 5.6E-05 1.2E-09 56.1 7.5 27 78-104 266-292 (339)
10 KOG2984 Predicted hydrolase [G 97.9 3.8E-05 8.2E-10 54.7 5.4 43 63-105 192-234 (277)
11 PLN03087 BODYGUARD 1 domain co 97.8 2.3E-05 5E-10 61.7 3.8 25 81-105 412-436 (481)
12 TIGR03056 bchO_mg_che_rel puta 97.7 0.00022 4.7E-09 50.4 7.3 25 80-104 213-237 (278)
13 PRK03204 haloalkane dehalogena 97.5 0.00037 8.1E-09 50.7 6.7 21 2-22 91-111 (286)
14 TIGR03611 RutD pyrimidine util 97.5 0.00017 3.8E-09 49.9 4.1 27 79-105 190-216 (257)
15 TIGR02427 protocat_pcaD 3-oxoa 97.5 0.0013 2.8E-08 45.0 8.3 27 79-105 185-211 (251)
16 PF12697 Abhydrolase_6: Alpha/ 97.4 8.2E-06 1.8E-10 55.0 -3.3 26 78-103 167-192 (228)
17 PRK14875 acetoin dehydrogenase 97.4 0.00039 8.4E-09 51.7 5.2 28 78-105 305-332 (371)
18 PRK05077 frsA fermentation/res 97.3 0.00041 8.9E-09 53.6 4.6 22 84-105 352-373 (414)
19 PRK06489 hypothetical protein; 97.1 0.00029 6.2E-09 53.0 2.5 28 78-105 283-310 (360)
20 TIGR01250 pro_imino_pep_2 prol 97.1 0.0044 9.6E-08 43.3 8.3 22 80-101 224-245 (288)
21 PHA02857 monoglyceride lipase; 97.0 0.00019 4.1E-09 51.4 0.6 26 80-105 202-227 (276)
22 PLN02980 2-oxoglutarate decarb 96.9 0.0028 6.1E-08 56.5 7.0 25 78-102 1559-1583(1655)
23 PRK10349 carboxylesterase BioH 96.9 0.00043 9.4E-09 49.0 1.2 27 78-104 187-213 (256)
24 TIGR03695 menH_SHCHC 2-succiny 96.9 0.0045 9.7E-08 42.0 6.2 25 78-102 185-209 (251)
25 PRK11071 esterase YqiA; Provis 96.8 0.00025 5.4E-09 49.1 -0.4 27 2-28 51-77 (190)
26 PLN02298 hydrolase, alpha/beta 96.8 0.00035 7.6E-09 51.6 0.3 26 80-105 244-269 (330)
27 PLN02511 hydrolase 96.6 0.0015 3.3E-08 49.9 2.7 26 80-105 291-316 (388)
28 TIGR01738 bioH putative pimelo 96.5 0.0016 3.4E-08 44.4 2.1 28 78-105 179-206 (245)
29 PLN02385 hydrolase; alpha/beta 96.5 0.0017 3.6E-08 48.6 2.2 26 80-105 272-297 (349)
30 PRK00175 metX homoserine O-ace 96.5 0.0012 2.6E-08 50.1 1.4 28 78-105 300-327 (379)
31 PRK00870 haloalkane dehalogena 96.5 0.0019 4E-08 47.1 2.1 24 81-104 233-256 (302)
32 KOG1552 Predicted alpha/beta h 96.4 0.0014 2.9E-08 47.9 1.2 29 80-110 185-213 (258)
33 PRK10749 lysophospholipase L2; 96.1 0.0028 6.1E-08 47.1 1.5 25 81-105 253-277 (330)
34 TIGR01392 homoserO_Ac_trn homo 96.1 0.0031 6.7E-08 47.2 1.5 27 79-105 280-306 (351)
35 PLN02965 Probable pheophorbida 96.0 0.0046 9.9E-08 43.9 2.0 23 82-104 188-210 (255)
36 PLN02652 hydrolase; alpha/beta 95.8 0.006 1.3E-07 47.0 2.1 26 80-105 317-342 (395)
37 COG2267 PldB Lysophospholipase 95.6 0.046 1E-06 40.5 6.2 24 81-104 222-246 (298)
38 PRK06765 homoserine O-acetyltr 95.6 0.0059 1.3E-07 47.0 1.4 28 78-105 314-341 (389)
39 PRK10673 acyl-CoA esterase; Pr 95.5 0.0091 2E-07 41.8 2.2 23 82-104 190-212 (255)
40 PRK10985 putative hydrolase; P 95.5 0.0088 1.9E-07 44.4 2.2 25 80-104 248-272 (324)
41 PRK08775 homoserine O-acetyltr 95.3 0.0091 2E-07 44.5 1.6 23 82-104 272-294 (343)
42 PLN03084 alpha/beta hydrolase 95.0 0.014 2.9E-07 44.9 1.9 21 84-104 322-342 (383)
43 PRK07868 acyl-CoA synthetase; 94.6 0.016 3.5E-07 49.2 1.5 24 82-105 292-315 (994)
44 TIGR01249 pro_imino_pep_1 prol 94.5 0.026 5.7E-07 41.3 2.2 25 81-105 241-266 (306)
45 PRK10566 esterase; Provisional 94.5 0.012 2.5E-07 41.5 0.2 25 81-105 179-204 (249)
46 COG1647 Esterase/lipase [Gener 94.4 0.029 6.2E-07 40.5 2.1 25 81-105 175-199 (243)
47 PRK05855 short chain dehydroge 94.2 0.028 6E-07 44.1 1.7 23 83-105 229-251 (582)
48 PLN02894 hydrolase, alpha/beta 94.1 0.04 8.7E-07 42.4 2.5 25 78-102 316-340 (402)
49 PF00561 Abhydrolase_1: alpha/ 94.0 0.028 6E-07 38.2 1.2 25 80-104 168-192 (230)
50 PRK13604 luxD acyl transferase 93.9 0.015 3.2E-07 43.6 -0.3 25 81-105 196-220 (307)
51 TIGR01836 PHA_synth_III_C poly 92.8 0.059 1.3E-06 40.3 1.5 24 82-105 281-304 (350)
52 KOG4178 Soluble epoxide hydrol 92.8 0.076 1.6E-06 40.1 2.0 24 81-104 252-275 (322)
53 PF00326 Peptidase_S9: Prolyl 92.5 0.031 6.8E-07 38.6 -0.3 20 86-105 143-162 (213)
54 KOG1455 Lysophospholipase [Lip 92.4 0.098 2.1E-06 39.2 2.2 27 78-104 237-263 (313)
55 COG0429 Predicted hydrolase of 92.2 0.11 2.4E-06 39.4 2.3 24 81-104 268-291 (345)
56 COG1506 DAP2 Dipeptidyl aminop 92.2 0.051 1.1E-06 44.1 0.5 24 82-105 546-569 (620)
57 KOG4409 Predicted hydrolase/ac 91.9 0.4 8.6E-06 36.8 4.9 45 58-103 270-318 (365)
58 TIGR01838 PHA_synth_I poly(R)- 91.9 0.12 2.6E-06 41.5 2.3 24 81-104 409-432 (532)
59 PF12695 Abhydrolase_5: Alpha/ 91.7 0.084 1.8E-06 33.6 1.0 25 80-104 97-121 (145)
60 PLN02211 methyl indole-3-aceta 91.5 0.11 2.4E-06 37.6 1.6 22 83-104 206-228 (273)
61 TIGR03100 hydr1_PEP hydrolase, 90.8 0.069 1.5E-06 38.7 -0.0 23 80-102 200-222 (274)
62 TIGR01607 PST-A Plasmodium sub 89.6 0.19 4E-06 37.6 1.4 24 82-105 263-288 (332)
63 PF01738 DLH: Dienelactone hyd 88.9 0.21 4.6E-06 34.6 1.2 24 81-104 139-162 (218)
64 PF03959 FSH1: Serine hydrolas 88.9 0.26 5.6E-06 34.5 1.6 21 83-103 157-177 (212)
65 COG0596 MhpC Predicted hydrola 88.7 0.39 8.5E-06 31.9 2.4 24 80-103 214-237 (282)
66 KOG4667 Predicted esterase [Li 85.9 0.43 9.4E-06 34.6 1.4 20 86-105 198-217 (269)
67 PF05728 UPF0227: Uncharacteri 85.7 0.54 1.2E-05 32.7 1.7 22 87-108 134-155 (187)
68 PRK11460 putative hydrolase; P 85.5 0.55 1.2E-05 33.3 1.8 21 85-105 146-166 (232)
69 COG0400 Predicted esterase [Ge 85.1 0.22 4.7E-06 35.3 -0.5 19 87-105 146-164 (207)
70 PF06342 DUF1057: Alpha/beta h 85.1 4.9 0.00011 30.1 6.5 43 60-102 183-227 (297)
71 PF08386 Abhydrolase_4: TAP-li 84.9 0.25 5.5E-06 30.9 -0.2 21 85-105 32-52 (103)
72 PLN02965 Probable pheophorbida 83.2 1.5 3.3E-05 30.9 3.2 23 2-24 61-84 (255)
73 PF02230 Abhydrolase_2: Phosph 82.8 0.94 2E-05 31.5 2.0 18 87-104 155-172 (216)
74 TIGR01840 esterase_phb esteras 82.6 1 2.2E-05 31.1 2.1 21 85-105 166-186 (212)
75 PF08840 BAAT_C: BAAT / Acyl-C 81.8 0.67 1.5E-05 32.6 0.9 21 83-103 111-131 (213)
76 PRK00870 haloalkane dehalogena 81.7 1.9 4E-05 31.3 3.2 23 2-24 105-127 (302)
77 PF11339 DUF3141: Protein of u 81.1 1.1 2.4E-05 36.2 2.0 28 81-108 291-318 (581)
78 PF01674 Lipase_2: Lipase (cla 79.9 2.1 4.6E-05 30.5 3.0 28 1-28 61-91 (219)
79 PLN02872 triacylglycerol lipas 79.9 1.4 3E-05 34.1 2.1 22 83-104 319-342 (395)
80 KOG3043 Predicted hydrolase re 77.5 1.5 3.2E-05 31.8 1.5 26 80-105 157-182 (242)
81 PLN02442 S-formylglutathione h 75.6 2.7 5.8E-05 30.7 2.5 21 83-103 213-233 (283)
82 TIGR01839 PHA_synth_II poly(R) 75.3 1.7 3.6E-05 35.4 1.5 24 82-105 436-459 (560)
83 COG1073 Hydrolases of the alph 74.4 2 4.3E-05 30.1 1.6 25 81-105 225-250 (299)
84 PRK10673 acyl-CoA esterase; Pr 74.2 3.4 7.4E-05 28.6 2.7 20 2-21 71-90 (255)
85 PLN02211 methyl indole-3-aceta 74.2 4.4 9.6E-05 29.2 3.4 24 2-25 76-100 (273)
86 COG0412 Dienelactone hydrolase 74.1 2.7 5.8E-05 30.1 2.2 22 83-104 154-175 (236)
87 PF05277 DUF726: Protein of un 73.4 4.1 8.8E-05 31.2 3.1 24 2-25 208-233 (345)
88 PRK08775 homoserine O-acetyltr 73.2 3 6.5E-05 31.0 2.3 20 2-21 127-147 (343)
89 COG3571 Predicted hydrolase of 70.8 3.6 7.8E-05 28.7 2.1 22 81-102 136-157 (213)
90 PRK05371 x-prolyl-dipeptidyl a 67.6 3.3 7.1E-05 34.9 1.6 26 80-105 448-473 (767)
91 PF03583 LIP: Secretory lipase 64.5 5.6 0.00012 29.3 2.2 19 87-105 219-237 (290)
92 TIGR01392 homoserO_Ac_trn homo 63.6 6.9 0.00015 29.2 2.5 20 2-21 116-136 (351)
93 COG3243 PhaC Poly(3-hydroxyalk 63.3 5.2 0.00011 31.6 1.9 23 82-104 325-347 (445)
94 PLN02733 phosphatidylcholine-s 63.0 9.3 0.0002 30.1 3.2 25 3-27 153-177 (440)
95 PRK14747 cytochrome b6-f compl 62.9 5.4 0.00012 19.4 1.2 8 90-97 20-27 (29)
96 TIGR03230 lipo_lipase lipoprot 62.8 8 0.00017 30.6 2.8 27 2-28 103-135 (442)
97 TIGR01849 PHB_depoly_PhaZ poly 62.3 2.9 6.4E-05 32.6 0.4 25 82-106 332-357 (406)
98 PF08538 DUF1749: Protein of u 62.3 3.9 8.4E-05 30.8 1.0 27 78-104 223-249 (303)
99 KOG1783 Small nuclear ribonucl 60.6 8 0.00017 23.0 1.9 17 3-19 8-24 (77)
100 KOG1838 Alpha/beta hydrolase [ 60.6 8.3 0.00018 30.2 2.5 26 79-104 314-339 (409)
101 CHL00009 petN cytochrome b6/f 59.9 6.6 0.00014 19.1 1.2 8 90-97 20-27 (29)
102 PRK00175 metX homoserine O-ace 58.8 9.4 0.0002 29.0 2.6 20 2-21 136-156 (379)
103 cd00707 Pancreat_lipase_like P 57.9 8.5 0.00018 28.1 2.1 27 2-28 96-128 (275)
104 PRK02529 petN cytochrome b6-f 57.7 7.4 0.00016 19.4 1.2 9 90-98 19-27 (33)
105 COG4099 Predicted peptidase [G 56.4 10 0.00022 29.0 2.3 21 87-107 315-335 (387)
106 PF05448 AXE1: Acetyl xylan es 56.0 4.7 0.0001 30.3 0.5 26 81-106 256-281 (320)
107 PLN03084 alpha/beta hydrolase 55.0 9.5 0.00021 29.4 2.0 20 2-21 187-206 (383)
108 PLN02894 hydrolase, alpha/beta 54.6 16 0.00034 28.2 3.2 20 2-21 166-185 (402)
109 PF07819 PGAP1: PGAP1-like pro 53.9 18 0.00039 25.7 3.2 19 10-28 83-101 (225)
110 PF10605 3HBOH: 3HB-oligomer h 53.8 9 0.0002 31.7 1.8 23 84-106 551-574 (690)
111 KOG2385 Uncharacterized conser 52.4 9.3 0.0002 31.1 1.6 19 9-27 444-462 (633)
112 PF11288 DUF3089: Protein of u 52.4 14 0.0003 26.3 2.4 22 3-24 85-107 (207)
113 PF10503 Esterase_phd: Esteras 50.5 13 0.00028 26.6 2.0 18 88-105 170-187 (220)
114 PF05990 DUF900: Alpha/beta hy 50.0 21 0.00045 25.5 3.1 27 2-28 79-109 (233)
115 KOG2551 Phospholipase/carboxyh 49.8 12 0.00025 27.1 1.7 23 82-104 158-180 (230)
116 TIGR01249 pro_imino_pep_1 prol 49.7 20 0.00043 26.1 3.0 20 2-21 85-104 (306)
117 PRK10115 protease 2; Provision 49.3 13 0.00028 30.9 2.1 24 82-105 600-624 (686)
118 PF06500 DUF1100: Alpha/beta h 47.2 15 0.00033 28.8 2.1 24 82-105 345-370 (411)
119 PRK10749 lysophospholipase L2; 46.8 28 0.00061 25.7 3.4 25 2-26 117-145 (330)
120 TIGR02821 fghA_ester_D S-formy 46.1 18 0.00038 26.1 2.2 18 86-103 210-227 (275)
121 KOG4391 Predicted alpha/beta h 44.1 20 0.00043 26.3 2.2 24 81-104 215-238 (300)
122 PRK06765 homoserine O-acetyltr 44.0 19 0.00041 27.8 2.2 20 2-21 150-170 (389)
123 TIGR03101 hydr2_PEP hydrolase, 42.9 32 0.00069 25.2 3.1 23 4-26 91-113 (266)
124 PF02450 LCAT: Lecithin:choles 42.8 22 0.00048 27.3 2.4 17 11-27 118-134 (389)
125 KOG2369 Lecithin:cholesterol a 39.0 27 0.00059 27.9 2.4 16 9-24 179-194 (473)
126 PF03096 Ndr: Ndr family; Int 37.8 81 0.0018 23.6 4.6 25 77-101 209-233 (283)
127 TIGR03131 malonate_mdcH malona 37.0 38 0.00083 24.6 2.8 27 2-28 66-92 (295)
128 PF00698 Acyl_transf_1: Acyl t 36.6 27 0.00059 25.7 2.0 27 2-28 74-100 (318)
129 PF00151 Lipase: Lipase; Inte 36.6 44 0.00095 25.3 3.1 27 2-28 134-166 (331)
130 KOG2382 Predicted alpha/beta h 36.4 33 0.00072 26.0 2.4 21 84-104 250-270 (315)
131 KOG2112 Lysophospholipase [Lip 36.4 16 0.00034 26.1 0.6 18 87-104 144-161 (206)
132 PRK10162 acetyl esterase; Prov 35.9 8.7 0.00019 28.5 -0.8 16 88-103 249-264 (318)
133 KOG2624 Triglyceride lipase-ch 34.1 23 0.00051 27.7 1.3 23 82-104 327-349 (403)
134 PF06057 VirJ: Bacterial virul 33.6 55 0.0012 23.1 3.0 24 79-102 130-154 (192)
135 PRK05855 short chain dehydroge 33.2 57 0.0012 25.5 3.4 22 2-23 83-105 (582)
136 KOG2931 Differentiation-relate 30.0 2.5E+02 0.0055 21.4 6.4 17 85-101 244-260 (326)
137 smart00827 PKS_AT Acyl transfe 28.0 64 0.0014 23.2 2.7 27 2-28 72-98 (298)
138 PLN02517 phosphatidylcholine-s 27.0 58 0.0013 27.1 2.5 17 11-27 212-228 (642)
139 cd00741 Lipase Lipase. Lipase 26.9 85 0.0018 20.2 2.9 18 11-28 27-44 (153)
140 PF05057 DUF676: Putative seri 26.4 54 0.0012 22.9 2.0 23 83-105 191-213 (217)
141 COG2272 PnbA Carboxylesterase 26.1 3.6E+02 0.0078 21.9 6.7 23 2-24 168-192 (491)
142 PF03742 PetN: PetN ; InterPr 23.3 7.4 0.00016 18.9 -2.0 7 91-97 21-27 (29)
143 TIGR00128 fabD malonyl CoA-acy 22.9 90 0.002 22.3 2.7 26 3-28 73-99 (290)
144 PRK04940 hypothetical protein; 22.9 68 0.0015 22.3 1.9 18 90-107 127-144 (180)
145 PF01764 Lipase_3: Lipase (cla 21.4 1.3E+02 0.0028 18.8 2.9 18 11-28 63-80 (140)
146 COG3458 Acetyl esterase (deace 21.3 53 0.0012 24.8 1.2 28 81-108 253-280 (321)
147 KOG2564 Predicted acetyltransf 21.1 97 0.0021 23.6 2.5 15 12-26 146-160 (343)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.89 E-value=5.3e-09 Score=75.88 Aligned_cols=28 Identities=39% Similarity=1.062 Sum_probs=23.9
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
...+.+.++++|||+|||++|+++|.+.
T Consensus 225 ~~~~~l~~i~~P~lvi~G~~D~~~~~~~ 252 (294)
T PLN02824 225 LPEELLPAVKCPVLIAWGEKDPWEPVEL 252 (294)
T ss_pred chHHHHhhcCCCeEEEEecCCCCCChHH
Confidence 3456789999999999999999999854
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=98.86 E-value=1.4e-08 Score=76.43 Aligned_cols=43 Identities=81% Similarity=1.530 Sum_probs=30.6
Q ss_pred hHHHHHHHhhcCCCCCChhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 62 GALDAFVSIVTGPSGPNPVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 62 ~a~~a~~~~~~~~~~~~~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
+...++.+++.........+.+.+|++|||++||++|+++|++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~ 309 (360)
T PLN02679 267 GALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLD 309 (360)
T ss_pred ChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCch
Confidence 3444555544432333445678999999999999999999986
No 3
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.64 E-value=1.4e-08 Score=76.01 Aligned_cols=46 Identities=35% Similarity=0.577 Sum_probs=34.1
Q ss_pred ChhHHHHHHHhhcCCCC--CChhhcCCCCC-CCeEEEecCCCCCCCCCC
Q 044687 60 DEGALDAFVSIVTGPSG--PNPVQLMPSIS-IPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 60 ~~~a~~a~~~~~~~~~~--~~~~~~l~~i~-~PtLliWG~~D~~iP~~~ 105 (111)
...+++++.+++....+ ....+.+.++. ||+||+||++|+++|.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~ 282 (326)
T KOG1454|consen 234 EHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLEL 282 (326)
T ss_pred cchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHH
Confidence 33566666666655444 45556788888 999999999999999863
No 4
>PLN02578 hydrolase
Probab=98.58 E-value=1.5e-07 Score=70.64 Aligned_cols=47 Identities=28% Similarity=0.531 Sum_probs=32.6
Q ss_pred CChhHHHHHHHhhcC----CCCCChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 59 NDEGALDAFVSIVTG----PSGPNPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 59 ~~~~a~~a~~~~~~~----~~~~~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+++..+++..+++. .......+.+.++++|||+|||++|+++|.+.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 264 ADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred cCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 445555555544332 22334567899999999999999999998753
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.29 E-value=5.1e-07 Score=65.00 Aligned_cols=25 Identities=44% Similarity=0.731 Sum_probs=22.3
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+.+.++++|||++||++|+++|++.
T Consensus 201 ~~l~~i~~P~lii~G~~D~~v~~~~ 225 (276)
T TIGR02240 201 HWLHKIQQPTLVLAGDDDPIIPLIN 225 (276)
T ss_pred hHhhcCCCCEEEEEeCCCCcCCHHH
Confidence 5578999999999999999999854
No 6
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.22 E-value=5.6e-06 Score=60.05 Aligned_cols=23 Identities=13% Similarity=0.304 Sum_probs=20.3
Q ss_pred hcCCCCCCCeEEEecCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~ 103 (111)
+.+.++++|||+|||++|+++++
T Consensus 222 ~~l~~i~~P~lii~G~~D~~~~~ 244 (295)
T PRK03592 222 QWLATSDVPKLLINAEPGAILTT 244 (295)
T ss_pred HHhccCCCCeEEEeccCCcccCc
Confidence 45788999999999999999954
No 7
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=98.02 E-value=5.3e-05 Score=54.12 Aligned_cols=27 Identities=37% Similarity=0.703 Sum_probs=23.4
Q ss_pred hhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 79 PVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 79 ~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+.+.++++|||++||++|+++|++.
T Consensus 215 ~~~~l~~i~~Pvlli~G~~D~~v~~~~ 241 (282)
T TIGR03343 215 VTARLGEIKAKTLVTWGRDDRFVPLDH 241 (282)
T ss_pred HHHHHhhCCCCEEEEEccCCCcCCchh
Confidence 446688999999999999999999754
No 8
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.94 E-value=0.00017 Score=50.41 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=20.5
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFT 101 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~i 101 (111)
...+.+.++++|||++||++|+.+
T Consensus 179 ~~~~~l~~i~~P~lii~G~~D~~~ 202 (242)
T PRK11126 179 DLRPALQALTFPFYYLCGERDSKF 202 (242)
T ss_pred cHHHHhhccCCCeEEEEeCCcchH
Confidence 455678999999999999999865
No 9
>PRK07581 hypothetical protein; Validated
Probab=97.91 E-value=5.6e-05 Score=56.08 Aligned_cols=27 Identities=19% Similarity=0.230 Sum_probs=23.7
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
...+.+.+|++|||+|||++|..+|++
T Consensus 266 d~~~~L~~I~~PtLvI~G~~D~~~p~~ 292 (339)
T PRK07581 266 DLAAALGSITAKTFVMPISTDLYFPPE 292 (339)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHH
Confidence 455778999999999999999999974
No 10
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.86 E-value=3.8e-05 Score=54.68 Aligned_cols=43 Identities=21% Similarity=0.321 Sum_probs=32.6
Q ss_pred HHHHHHHhhcCCCCCChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 63 ALDAFVSIVTGPSGPNPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 63 a~~a~~~~~~~~~~~~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+.++...|-+...+.-.+..+++++|||||++|+.|++++-.+
T Consensus 192 wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~h 234 (277)
T KOG2984|consen 192 WVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPH 234 (277)
T ss_pred HHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCC
Confidence 4444445554455666778899999999999999999998654
No 11
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.79 E-value=2.3e-05 Score=61.69 Aligned_cols=25 Identities=16% Similarity=0.445 Sum_probs=21.4
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+.+.+|++|||++||++|.++|++.
T Consensus 412 ~l~~~I~vPtLII~Ge~D~ivP~~~ 436 (481)
T PLN03087 412 HVRDQLKCDVAIFHGGDDELIPVEC 436 (481)
T ss_pred HHHHhCCCCEEEEEECCCCCCCHHH
Confidence 4455899999999999999999864
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=97.69 E-value=0.00022 Score=50.41 Aligned_cols=25 Identities=36% Similarity=0.643 Sum_probs=21.8
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+.++++|+|++||++|..+|.+
T Consensus 213 ~~~~~~i~~P~lii~g~~D~~vp~~ 237 (278)
T TIGR03056 213 NRDLPRITIPLHLIAGEEDKAVPPD 237 (278)
T ss_pred hhhcccCCCCEEEEEeCCCcccCHH
Confidence 3457889999999999999999874
No 13
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.52 E-value=0.00037 Score=50.73 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=17.6
Q ss_pred HHHHHHHhcCCCEEEEecCch
Q 044687 2 ILDFLDEVVRKPTVLIGIGDD 22 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~ 22 (111)
+.+++++...+++++||+|++
T Consensus 91 ~~~~~~~~~~~~~~lvG~S~G 111 (286)
T PRK03204 91 IGEFVDHLGLDRYLSMGQDWG 111 (286)
T ss_pred HHHHHHHhCCCCEEEEEECcc
Confidence 567788888899999999883
No 14
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=97.46 E-value=0.00017 Score=49.88 Aligned_cols=27 Identities=22% Similarity=0.383 Sum_probs=23.0
Q ss_pred hhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 79 PVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 79 ~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+.+.++++|+|++||++|+++|.+.
T Consensus 190 ~~~~~~~i~~P~l~i~g~~D~~~~~~~ 216 (257)
T TIGR03611 190 VSARLDRIQHPVLLIANRDDMLVPYTQ 216 (257)
T ss_pred cHHHhcccCccEEEEecCcCcccCHHH
Confidence 345688999999999999999999754
No 15
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.45 E-value=0.0013 Score=44.95 Aligned_cols=27 Identities=30% Similarity=0.443 Sum_probs=23.0
Q ss_pred hhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 79 PVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 79 ~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+.+.++++|+|+++|++|+++|.+.
T Consensus 185 ~~~~~~~~~~Pvlii~g~~D~~~~~~~ 211 (251)
T TIGR02427 185 FRDRLGAIAVPTLCIAGDQDGSTPPEL 211 (251)
T ss_pred HHHHhhhcCCCeEEEEeccCCcCChHH
Confidence 445678899999999999999999753
No 16
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=97.38 E-value=8.2e-06 Score=54.97 Aligned_cols=26 Identities=38% Similarity=0.869 Sum_probs=21.9
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~ 103 (111)
...+.++++++|+++++|++|.++|.
T Consensus 167 ~~~~~~~~~~~pvl~i~g~~D~~~~~ 192 (228)
T PF12697_consen 167 DLSEALPRIKVPVLVIHGEDDPIVPP 192 (228)
T ss_dssp HHHHHHHGSSSEEEEEEETTSSSSHH
T ss_pred cccccccccCCCeEEeecCCCCCCCH
Confidence 34466788899999999999999884
No 17
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.37 E-value=0.00039 Score=51.65 Aligned_cols=28 Identities=36% Similarity=0.799 Sum_probs=23.4
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
...+.+.++++|||++||++|.++|.+.
T Consensus 305 ~~~~~l~~i~~Pvlii~g~~D~~vp~~~ 332 (371)
T PRK14875 305 DLRDRLASLAIPVLVIWGEQDRIIPAAH 332 (371)
T ss_pred hHHHHHhcCCCCEEEEEECCCCccCHHH
Confidence 3445678899999999999999999754
No 18
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.28 E-value=0.00041 Score=53.58 Aligned_cols=22 Identities=27% Similarity=0.530 Sum_probs=20.2
Q ss_pred CCCCCCeEEEecCCCCCCCCCC
Q 044687 84 PSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 84 ~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.++++|+|++||++|+++|+++
T Consensus 352 ~~i~~PvLiI~G~~D~ivP~~~ 373 (414)
T PRK05077 352 RRCPTPMLSGYWKNDPFSPEED 373 (414)
T ss_pred cCCCCcEEEEecCCCCCCCHHH
Confidence 5799999999999999999865
No 19
>PRK06489 hypothetical protein; Provisional
Probab=97.15 E-value=0.00029 Score=52.98 Aligned_cols=28 Identities=29% Similarity=0.457 Sum_probs=24.6
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+..+.+.+|++|||+|||++|.++|++.
T Consensus 283 d~~~~L~~I~~PvLvI~G~~D~~~p~~~ 310 (360)
T PRK06489 283 NPSPDLEKIKAPVLAINSADDERNPPET 310 (360)
T ss_pred ChHHHHHhCCCCEEEEecCCCcccChhh
Confidence 4567789999999999999999999864
No 20
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=97.13 E-value=0.0044 Score=43.31 Aligned_cols=22 Identities=27% Similarity=0.504 Sum_probs=18.8
Q ss_pred hhcCCCCCCCeEEEecCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFT 101 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~i 101 (111)
.+.+.++++|+|+++|++|++.
T Consensus 224 ~~~l~~i~~P~lii~G~~D~~~ 245 (288)
T TIGR01250 224 TDKLSEIKVPTLLTVGEFDTMT 245 (288)
T ss_pred HHHhhccCCCEEEEecCCCccC
Confidence 3567889999999999999864
No 21
>PHA02857 monoglyceride lipase; Provisional
Probab=97.04 E-value=0.00019 Score=51.39 Aligned_cols=26 Identities=23% Similarity=0.608 Sum_probs=23.1
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.+.++++|||++||++|.++|++.
T Consensus 202 ~~~l~~i~~Pvliv~G~~D~i~~~~~ 227 (276)
T PHA02857 202 RKIIPKIKTPILILQGTNNEISDVSG 227 (276)
T ss_pred HHhcccCCCCEEEEecCCCCcCChHH
Confidence 45688999999999999999999864
No 22
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=96.94 E-value=0.0028 Score=56.46 Aligned_cols=25 Identities=16% Similarity=0.223 Sum_probs=21.7
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP 102 (111)
+..+.+.++++|||+|||++|.++|
T Consensus 1559 dl~~~L~~I~~PtLlI~Ge~D~~~~ 1583 (1655)
T PLN02980 1559 SLWEDLKQCDTPLLLVVGEKDVKFK 1583 (1655)
T ss_pred hHHHHHhhCCCCEEEEEECCCCccH
Confidence 4557799999999999999999875
No 23
>PRK10349 carboxylesterase BioH; Provisional
Probab=96.86 E-value=0.00043 Score=48.99 Aligned_cols=27 Identities=30% Similarity=0.487 Sum_probs=23.5
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
+..+.+.++++|||++||++|+++|.+
T Consensus 187 ~~~~~l~~i~~P~lii~G~~D~~~~~~ 213 (256)
T PRK10349 187 DLRQPLQNVSMPFLRLYGYLDGLVPRK 213 (256)
T ss_pred ccHHHHhhcCCCeEEEecCCCccCCHH
Confidence 445678899999999999999999875
No 24
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=96.86 E-value=0.0045 Score=42.04 Aligned_cols=25 Identities=28% Similarity=0.401 Sum_probs=20.2
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP 102 (111)
...+.+.++++|+|++||++|..++
T Consensus 185 ~~~~~~~~~~~P~l~i~g~~D~~~~ 209 (251)
T TIGR03695 185 SLWPKLQALTIPVLYLCGEKDEKFV 209 (251)
T ss_pred chHHHhhCCCCceEEEeeCcchHHH
Confidence 3445678899999999999998654
No 25
>PRK11071 esterase YqiA; Provisional
Probab=96.81 E-value=0.00025 Score=49.12 Aligned_cols=27 Identities=15% Similarity=0.010 Sum_probs=21.2
Q ss_pred HHHHHHHhcCCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVVRKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~~~v~~l 28 (111)
+.+++++...+++++||+|++..+...
T Consensus 51 l~~l~~~~~~~~~~lvG~S~Gg~~a~~ 77 (190)
T PRK11071 51 LESLVLEHGGDPLGLVGSSLGGYYATW 77 (190)
T ss_pred HHHHHHHcCCCCeEEEEECHHHHHHHH
Confidence 567777777899999999997665554
No 26
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=96.79 E-value=0.00035 Score=51.56 Aligned_cols=26 Identities=35% Similarity=0.482 Sum_probs=23.0
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.+.++++|||++||++|+++|++.
T Consensus 244 ~~~l~~i~~PvLii~G~~D~ivp~~~ 269 (330)
T PLN02298 244 GKKLKDVSIPFIVLHGSADVVTDPDV 269 (330)
T ss_pred HHhhhhcCCCEEEEecCCCCCCCHHH
Confidence 45688999999999999999999864
No 27
>PLN02511 hydrolase
Probab=96.63 E-value=0.0015 Score=49.88 Aligned_cols=26 Identities=19% Similarity=0.502 Sum_probs=22.9
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.+++|++|||+|||++|+++|.+.
T Consensus 291 ~~~L~~I~vPtLiI~g~dDpi~p~~~ 316 (388)
T PLN02511 291 SDSIKHVRVPLLCIQAANDPIAPARG 316 (388)
T ss_pred hhhhccCCCCeEEEEcCCCCcCCccc
Confidence 35688999999999999999999753
No 28
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=96.54 E-value=0.0016 Score=44.44 Aligned_cols=28 Identities=32% Similarity=0.476 Sum_probs=23.4
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+..+.+.++++|||++||++|+++|.+.
T Consensus 179 ~~~~~l~~i~~Pvlii~g~~D~~~~~~~ 206 (245)
T TIGR01738 179 DLRQPLQNISVPFLRLYGYLDGLVPAKV 206 (245)
T ss_pred cHHHHHhcCCCCEEEEeecCCcccCHHH
Confidence 3445678999999999999999999753
No 29
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.51 E-value=0.0017 Score=48.56 Aligned_cols=26 Identities=27% Similarity=0.479 Sum_probs=22.8
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.+.++++|||++||++|+++|++.
T Consensus 272 ~~~l~~i~~P~Lii~G~~D~vv~~~~ 297 (349)
T PLN02385 272 EMQLEEVSLPLLILHGEADKVTDPSV 297 (349)
T ss_pred HHhcccCCCCEEEEEeCCCCccChHH
Confidence 45688999999999999999999854
No 30
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.49 E-value=0.0012 Score=50.11 Aligned_cols=28 Identities=21% Similarity=0.170 Sum_probs=24.5
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
++.+.+.+|++|||+|||++|.++|++.
T Consensus 300 d~~~~l~~I~~PtLvI~G~~D~~~p~~~ 327 (379)
T PRK00175 300 DLAAALARIKARFLVVSFTSDWLFPPAR 327 (379)
T ss_pred CHHHHHhcCCCCEEEEEECCccccCHHH
Confidence 3667899999999999999999998753
No 31
>PRK00870 haloalkane dehalogenase; Provisional
Probab=96.45 E-value=0.0019 Score=47.09 Aligned_cols=24 Identities=25% Similarity=0.412 Sum_probs=21.3
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
+.+.++++|||+|||++|+++|.+
T Consensus 233 ~~l~~i~~P~lii~G~~D~~~~~~ 256 (302)
T PRK00870 233 AVLERWDKPFLTAFSDSDPITGGG 256 (302)
T ss_pred HhhhcCCCceEEEecCCCCcccCc
Confidence 457899999999999999999964
No 32
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.41 E-value=0.0014 Score=47.86 Aligned_cols=29 Identities=24% Similarity=0.613 Sum_probs=25.0
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCCcccCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDRPVGRY 110 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~~~~~~ 110 (111)
.+.++.|+||+|+++|.+|.++|.+| |++
T Consensus 185 i~kI~~i~~PVLiiHgtdDevv~~sH--g~~ 213 (258)
T KOG1552|consen 185 IEKISKITCPVLIIHGTDDEVVDFSH--GKA 213 (258)
T ss_pred cCcceeccCCEEEEecccCceecccc--cHH
Confidence 35688899999999999999999977 654
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=96.11 E-value=0.0028 Score=47.06 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=21.9
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+.+.++++|||++||++|+++|++.
T Consensus 253 ~~~~~i~~P~Lii~G~~D~vv~~~~ 277 (330)
T PRK10749 253 AGAGDITTPLLLLQAEEERVVDNRM 277 (330)
T ss_pred hhccCCCCCEEEEEeCCCeeeCHHH
Confidence 4578899999999999999999853
No 34
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=96.06 E-value=0.0031 Score=47.18 Aligned_cols=27 Identities=22% Similarity=0.232 Sum_probs=23.8
Q ss_pred hhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 79 PVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 79 ~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+.+.+|++|||+|||++|.++|++.
T Consensus 280 ~~~~l~~I~~P~Lvi~G~~D~~~p~~~ 306 (351)
T TIGR01392 280 LTEALSRIKAPFLVVSITSDWLFPPAE 306 (351)
T ss_pred HHHHHhhCCCCEEEEEeCCccccCHHH
Confidence 457899999999999999999999753
No 35
>PLN02965 Probable pheophorbidase
Probab=95.95 E-value=0.0046 Score=43.94 Aligned_cols=23 Identities=9% Similarity=-0.015 Sum_probs=20.4
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.++++|||++||++|+++|++
T Consensus 188 ~~~~i~vP~lvi~g~~D~~~~~~ 210 (255)
T PLN02965 188 NPEAEKVPRVYIKTAKDNLFDPV 210 (255)
T ss_pred hhhcCCCCEEEEEcCCCCCCCHH
Confidence 45679999999999999999884
No 36
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=95.78 E-value=0.006 Score=46.97 Aligned_cols=26 Identities=27% Similarity=0.410 Sum_probs=22.7
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.+.+|++|+|++||++|.++|++.
T Consensus 317 ~~~L~~I~vPvLIi~G~~D~vvp~~~ 342 (395)
T PLN02652 317 TRNFKSVTVPFMVLHGTADRVTDPLA 342 (395)
T ss_pred HhhcccCCCCEEEEEeCCCCCCCHHH
Confidence 35678999999999999999999854
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=95.61 E-value=0.046 Score=40.53 Aligned_cols=24 Identities=33% Similarity=0.675 Sum_probs=20.2
Q ss_pred hcCCCCCCCeEEEecCCCCCCC-CC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTP-LD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP-~~ 104 (111)
+....+++||||+.|++|++++ .+
T Consensus 222 ~~~~~~~~PvLll~g~~D~vv~~~~ 246 (298)
T COG2267 222 RDAPAIALPVLLLQGGDDRVVDNVE 246 (298)
T ss_pred hccccccCCEEEEecCCCccccCcH
Confidence 3366889999999999999998 44
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=95.59 E-value=0.0059 Score=46.96 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=24.4
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
++.+.+.+|++|||+|||++|.++|++.
T Consensus 314 dl~~~L~~I~~PtLvI~G~~D~l~p~~~ 341 (389)
T PRK06765 314 SLEEALSNIEANVLMIPCKQDLLQPPRY 341 (389)
T ss_pred CHHHHHhcCCCCEEEEEeCCCCCCCHHH
Confidence 4567889999999999999999999743
No 39
>PRK10673 acyl-CoA esterase; Provisional
Probab=95.55 E-value=0.0091 Score=41.82 Aligned_cols=23 Identities=22% Similarity=0.527 Sum_probs=20.2
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.++++|+|++||++|++++.+
T Consensus 190 ~~~~~~~P~l~i~G~~D~~~~~~ 212 (255)
T PRK10673 190 KIPAWPHPALFIRGGNSPYVTEA 212 (255)
T ss_pred ccCCCCCCeEEEECCCCCCCCHH
Confidence 46788999999999999998864
No 40
>PRK10985 putative hydrolase; Provisional
Probab=95.54 E-value=0.0088 Score=44.35 Aligned_cols=25 Identities=28% Similarity=0.659 Sum_probs=22.1
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+.+|++|||+|||++|+++|.+
T Consensus 248 ~~~l~~i~~P~lii~g~~D~~~~~~ 272 (324)
T PRK10985 248 LPLLNQIRKPTLIIHAKDDPFMTHE 272 (324)
T ss_pred HHHHhCCCCCEEEEecCCCCCCChh
Confidence 3568899999999999999999874
No 41
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=95.30 E-value=0.0091 Score=44.52 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=20.7
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+|++|||++||++|.++|++
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~ 294 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLA 294 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHH
Confidence 47899999999999999999974
No 42
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=95.05 E-value=0.014 Score=44.89 Aligned_cols=21 Identities=29% Similarity=0.578 Sum_probs=18.8
Q ss_pred CCCCCCeEEEecCCCCCCCCC
Q 044687 84 PSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 84 ~~i~~PtLliWG~~D~~iP~~ 104 (111)
.++++|||++||++|++++.+
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~ 342 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYD 342 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHH
Confidence 468999999999999999875
No 43
>PRK07868 acyl-CoA synthetase; Validated
Probab=94.63 E-value=0.016 Score=49.24 Aligned_cols=24 Identities=25% Similarity=0.411 Sum_probs=21.9
Q ss_pred cCCCCCCCeEEEecCCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+++|++|+|++||++|+++|++.
T Consensus 292 ~L~~i~~P~L~i~G~~D~ivp~~~ 315 (994)
T PRK07868 292 TLADITCPVLAFVGEVDDIGQPAS 315 (994)
T ss_pred chhhCCCCEEEEEeCCCCCCCHHH
Confidence 589999999999999999999854
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=94.54 E-value=0.026 Score=41.31 Aligned_cols=25 Identities=28% Similarity=0.514 Sum_probs=20.9
Q ss_pred hcCCCC-CCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSI-SIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i-~~PtLliWG~~D~~iP~~~ 105 (111)
+.+.++ ++|+|++||++|.++|.+.
T Consensus 241 ~~~~~i~~~P~lii~g~~D~~~p~~~ 266 (306)
T TIGR01249 241 DNISKIRNIPTYIVHGRYDLCCPLQS 266 (306)
T ss_pred HhhhhccCCCeEEEecCCCCCCCHHH
Confidence 456677 5999999999999999853
No 45
>PRK10566 esterase; Provisional
Probab=94.49 E-value=0.012 Score=41.47 Aligned_cols=25 Identities=20% Similarity=0.400 Sum_probs=20.8
Q ss_pred hcCCCC-CCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSI-SIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i-~~PtLliWG~~D~~iP~~~ 105 (111)
..+.++ ++|+|+++|++|.++|+++
T Consensus 179 ~~~~~i~~~P~Lii~G~~D~~v~~~~ 204 (249)
T PRK10566 179 HQLEQLADRPLLLWHGLADDVVPAAE 204 (249)
T ss_pred hhhhhcCCCCEEEEEcCCCCcCCHHH
Confidence 345666 7999999999999999854
No 46
>COG1647 Esterase/lipase [General function prediction only]
Probab=94.42 E-value=0.029 Score=40.47 Aligned_cols=25 Identities=28% Similarity=0.517 Sum_probs=22.2
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+..|..||+++-|++|.++|.+.
T Consensus 175 ~~~~~I~~pt~vvq~~~D~mv~~~s 199 (243)
T COG1647 175 RSLDKIYSPTLVVQGRQDEMVPAES 199 (243)
T ss_pred hhhhhcccchhheecccCCCCCHHH
Confidence 4577899999999999999999865
No 47
>PRK05855 short chain dehydrogenase; Validated
Probab=94.15 E-value=0.028 Score=44.07 Aligned_cols=23 Identities=17% Similarity=0.276 Sum_probs=20.0
Q ss_pred CCCCCCCeEEEecCCCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+..+++|||++||++|+++|.+.
T Consensus 229 ~~~~~~P~lii~G~~D~~v~~~~ 251 (582)
T PRK05855 229 ERYTDVPVQLIVPTGDPYVRPAL 251 (582)
T ss_pred cCCccCceEEEEeCCCcccCHHH
Confidence 55689999999999999999753
No 48
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=94.09 E-value=0.04 Score=42.36 Aligned_cols=25 Identities=12% Similarity=0.244 Sum_probs=20.9
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP 102 (111)
+..+.+.+|++|||++||++|.+.|
T Consensus 316 ~~~~~l~~I~vP~liI~G~~D~i~~ 340 (402)
T PLN02894 316 PLLESASEWKVPTTFIYGRHDWMNY 340 (402)
T ss_pred hHhhhcccCCCCEEEEEeCCCCCCc
Confidence 3446688999999999999998765
No 49
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=93.95 E-value=0.028 Score=38.22 Aligned_cols=25 Identities=32% Similarity=0.998 Sum_probs=21.9
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
...+.++++|+|++||++|+++|++
T Consensus 168 ~~~l~~i~~p~l~i~~~~D~~~p~~ 192 (230)
T PF00561_consen 168 SPALSNIKVPTLIIWGEDDPLVPPE 192 (230)
T ss_dssp HHHHTTTTSEEEEEEETTCSSSHHH
T ss_pred cccccccCCCeEEEEeCCCCCCCHH
Confidence 3567789999999999999999974
No 50
>PRK13604 luxD acyl transferase; Provisional
Probab=93.85 E-value=0.015 Score=43.64 Aligned_cols=25 Identities=16% Similarity=0.403 Sum_probs=22.3
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
+...+++.|+|+++|++|.++|+++
T Consensus 196 ~~~~~l~~PvLiIHG~~D~lVp~~~ 220 (307)
T PRK13604 196 NKMKGLDIPFIAFTANNDSWVKQSE 220 (307)
T ss_pred HHHhhcCCCEEEEEcCCCCccCHHH
Confidence 5577889999999999999999875
No 51
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=92.81 E-value=0.059 Score=40.31 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=21.0
Q ss_pred cCCCCCCCeEEEecCCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+.++++|+|+++|++|.++|++.
T Consensus 281 ~l~~i~~Pvliv~G~~D~i~~~~~ 304 (350)
T TIGR01836 281 DLKNIKMPILNIYAERDHLVPPDA 304 (350)
T ss_pred cHHhCCCCeEEEecCCCCcCCHHH
Confidence 367899999999999999999753
No 52
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=92.78 E-value=0.076 Score=40.07 Aligned_cols=24 Identities=46% Similarity=0.935 Sum_probs=21.3
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
-.+.++++||+++||+.|++.+..
T Consensus 252 ~~~~~i~iPv~fi~G~~D~v~~~p 275 (322)
T KOG4178|consen 252 WALAKITIPVLFIWGDLDPVLPYP 275 (322)
T ss_pred ccccccccceEEEEecCcccccch
Confidence 457899999999999999999875
No 53
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=92.48 E-value=0.031 Score=38.63 Aligned_cols=20 Identities=40% Similarity=0.803 Sum_probs=18.5
Q ss_pred CCCCeEEEecCCCCCCCCCC
Q 044687 86 ISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 86 i~~PtLliWG~~D~~iP~~~ 105 (111)
+++|+|+++|++|..+|+++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~ 162 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQ 162 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHH
T ss_pred CCCCEEEEccCCCCccCHHH
Confidence 88999999999999999865
No 54
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=92.40 E-value=0.098 Score=39.24 Aligned_cols=27 Identities=22% Similarity=0.468 Sum_probs=24.5
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+++.+.+++.|.+|+||++|.++.++
T Consensus 237 ~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 237 DLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HHHHhcccccccEEEEecCCCcccCcH
Confidence 567889999999999999999999875
No 55
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=92.20 E-value=0.11 Score=39.44 Aligned_cols=24 Identities=38% Similarity=0.837 Sum_probs=21.9
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+|.+|.+|||||+-.+|++++.+
T Consensus 268 ~~L~~Ir~PtLii~A~DDP~~~~~ 291 (345)
T COG0429 268 PLLPKIRKPTLIINAKDDPFMPPE 291 (345)
T ss_pred ccccccccceEEEecCCCCCCChh
Confidence 568999999999999999999973
No 56
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=92.18 E-value=0.051 Score=44.15 Aligned_cols=24 Identities=29% Similarity=0.674 Sum_probs=21.5
Q ss_pred cCCCCCCCeEEEecCCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
...++++|+|||||++|..+|+++
T Consensus 546 ~~~~i~~P~LliHG~~D~~v~~~q 569 (620)
T COG1506 546 YADNIKTPLLLIHGEEDDRVPIEQ 569 (620)
T ss_pred hhcccCCCEEEEeecCCccCChHH
Confidence 356899999999999999999976
No 57
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=91.93 E-value=0.4 Score=36.76 Aligned_cols=45 Identities=20% Similarity=0.381 Sum_probs=28.2
Q ss_pred CCChhHHHHHHHhhcCCC--CCChhhcCCCCC--CCeEEEecCCCCCCCC
Q 044687 58 ANDEGALDAFVSIVTGPS--GPNPVQLMPSIS--IPVLVLWGDEDPFTPL 103 (111)
Q Consensus 58 ~~~~~a~~a~~~~~~~~~--~~~~~~~l~~i~--~PtLliWG~~D~~iP~ 103 (111)
+..|-...+|-.++.... ...+.+.+..++ +||+.|+|++| |+..
T Consensus 270 ~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~d-WmD~ 318 (365)
T KOG4409|consen 270 AQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRD-WMDK 318 (365)
T ss_pred CCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcc-cccc
Confidence 445555566655554432 234556666676 99999999666 6554
No 58
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=91.92 E-value=0.12 Score=41.54 Aligned_cols=24 Identities=21% Similarity=0.452 Sum_probs=21.9
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
..+.+|++|+|+++|++|.++|.+
T Consensus 409 ~dL~~I~vPvLvV~G~~D~IvP~~ 432 (532)
T TIGR01838 409 LDLSKVKVPVYIIATREDHIAPWQ 432 (532)
T ss_pred cchhhCCCCEEEEeeCCCCcCCHH
Confidence 568999999999999999999874
No 59
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=91.67 E-value=0.084 Score=33.62 Aligned_cols=25 Identities=36% Similarity=0.764 Sum_probs=20.2
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+.+.+.|+++++|++|.++|.+
T Consensus 97 ~~~~~~~~~pv~~i~g~~D~~~~~~ 121 (145)
T PF12695_consen 97 SEDLAKIRIPVLFIHGENDPLVPPE 121 (145)
T ss_dssp CHHHTTTTSEEEEEEETT-SSSHHH
T ss_pred hhhhhccCCcEEEEEECCCCcCCHH
Confidence 4557788899999999999999864
No 60
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=91.47 E-value=0.11 Score=37.62 Aligned_cols=22 Identities=14% Similarity=0.152 Sum_probs=18.9
Q ss_pred CCCC-CCCeEEEecCCCCCCCCC
Q 044687 83 MPSI-SIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 83 l~~i-~~PtLliWG~~D~~iP~~ 104 (111)
..++ ++|+++|+|++|+.+|++
T Consensus 206 ~~~~~~vP~l~I~g~~D~~ip~~ 228 (273)
T PLN02211 206 TGDIDKVPRVYIKTLHDHVVKPE 228 (273)
T ss_pred ccccCccceEEEEeCCCCCCCHH
Confidence 4456 789999999999999975
No 61
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=90.84 E-value=0.069 Score=38.72 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=19.3
Q ss_pred hhcCCCCCCCeEEEecCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP 102 (111)
.+.+.++++|+|++||++|++.+
T Consensus 200 ~~~l~~~~~P~ll~~g~~D~~~~ 222 (274)
T TIGR03100 200 KAGLERFQGPVLFILSGNDLTAQ 222 (274)
T ss_pred HHHHHhcCCcEEEEEcCcchhHH
Confidence 34567889999999999998865
No 62
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=89.64 E-value=0.19 Score=37.63 Aligned_cols=24 Identities=21% Similarity=0.343 Sum_probs=19.7
Q ss_pred cCCCC--CCCeEEEecCCCCCCCCCC
Q 044687 82 LMPSI--SIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i--~~PtLliWG~~D~~iP~~~ 105 (111)
.+.++ ++|+|+++|++|++++++.
T Consensus 263 ~~~~i~~~~P~Lii~G~~D~vv~~~~ 288 (332)
T TIGR01607 263 DIDYIPKDIPILFIHSKGDCVCSYEG 288 (332)
T ss_pred hHhhCCCCCCEEEEEeCCCCccCHHH
Confidence 34556 7899999999999998754
No 63
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=88.88 E-value=0.21 Score=34.65 Aligned_cols=24 Identities=46% Similarity=0.958 Sum_probs=16.5
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
+...++++|+|+++|++|+++|.+
T Consensus 139 ~~~~~~~~P~l~~~g~~D~~~~~~ 162 (218)
T PF01738_consen 139 EDAPKIKAPVLILFGENDPFFPPE 162 (218)
T ss_dssp HHGGG--S-EEEEEETT-TTS-HH
T ss_pred hhhcccCCCEeecCccCCCCCChH
Confidence 457889999999999999999875
No 64
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=88.87 E-value=0.26 Score=34.52 Aligned_cols=21 Identities=48% Similarity=0.847 Sum_probs=13.6
Q ss_pred CCCCCCCeEEEecCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~ 103 (111)
-.+|++|||-|+|++|.+++.
T Consensus 157 ~~~i~iPtlHv~G~~D~~~~~ 177 (212)
T PF03959_consen 157 EPKISIPTLHVIGENDPVVPP 177 (212)
T ss_dssp -TT---EEEEEEETT-SSS-H
T ss_pred cccCCCCeEEEEeCCCCCcch
Confidence 357899999999999999984
No 65
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=88.71 E-value=0.39 Score=31.94 Aligned_cols=24 Identities=29% Similarity=0.772 Sum_probs=19.9
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~ 103 (111)
...+.++++|+++++|++|.+.|.
T Consensus 214 ~~~~~~~~~P~l~i~g~~d~~~~~ 237 (282)
T COG0596 214 RAALARITVPTLIIHGEDDPVVPA 237 (282)
T ss_pred chhhccCCCCeEEEecCCCCcCCH
Confidence 345778899999999999977765
No 66
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=85.94 E-value=0.43 Score=34.61 Aligned_cols=20 Identities=30% Similarity=0.537 Sum_probs=18.2
Q ss_pred CCCCeEEEecCCCCCCCCCC
Q 044687 86 ISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 86 i~~PtLliWG~~D~~iP~~~ 105 (111)
.+||||=++|.+|.++|++.
T Consensus 198 ~~C~VLTvhGs~D~IVPve~ 217 (269)
T KOG4667|consen 198 KQCRVLTVHGSEDEIVPVED 217 (269)
T ss_pred ccCceEEEeccCCceeechh
Confidence 36999999999999999976
No 67
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=85.71 E-value=0.54 Score=32.71 Aligned_cols=22 Identities=23% Similarity=0.172 Sum_probs=18.2
Q ss_pred CCCeEEEecCCCCCCCCCCccc
Q 044687 87 SIPVLVLWGDEDPFTPLDRPVG 108 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~~~~~ 108 (111)
..+++|+.|+.|.+++.+.+.+
T Consensus 134 ~~~~lvll~~~DEvLd~~~a~~ 155 (187)
T PF05728_consen 134 PERYLVLLQTGDEVLDYREAVA 155 (187)
T ss_pred CccEEEEEecCCcccCHHHHHH
Confidence 4689999999999999865443
No 68
>PRK11460 putative hydrolase; Provisional
Probab=85.52 E-value=0.55 Score=33.28 Aligned_cols=21 Identities=19% Similarity=0.460 Sum_probs=18.3
Q ss_pred CCCCCeEEEecCCCCCCCCCC
Q 044687 85 SISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 85 ~i~~PtLliWG~~D~~iP~~~ 105 (111)
..+.|+++++|++|+++|.+.
T Consensus 146 ~~~~pvli~hG~~D~vvp~~~ 166 (232)
T PRK11460 146 PTATTIHLIHGGEDPVIDVAH 166 (232)
T ss_pred cCCCcEEEEecCCCCccCHHH
Confidence 457899999999999999864
No 69
>COG0400 Predicted esterase [General function prediction only]
Probab=85.15 E-value=0.22 Score=35.32 Aligned_cols=19 Identities=42% Similarity=0.791 Sum_probs=16.9
Q ss_pred CCCeEEEecCCCCCCCCCC
Q 044687 87 SIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~~ 105 (111)
..|+++++|++|+++|...
T Consensus 146 ~~pill~hG~~Dpvvp~~~ 164 (207)
T COG0400 146 GTPILLSHGTEDPVVPLAL 164 (207)
T ss_pred CCeEEEeccCcCCccCHHH
Confidence 4799999999999999854
No 70
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=85.12 E-value=4.9 Score=30.14 Aligned_cols=43 Identities=21% Similarity=0.298 Sum_probs=26.7
Q ss_pred ChhHHHHHHHhhcCCCC--CChhhcCCCCCCCeEEEecCCCCCCC
Q 044687 60 DEGALDAFVSIVTGPSG--PNPVQLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 60 ~~~a~~a~~~~~~~~~~--~~~~~~l~~i~~PtLliWG~~D~~iP 102 (111)
...+..+..++.+..-. ...-+.+++-++|+|++.|.+|..+-
T Consensus 183 GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIE 227 (297)
T PF06342_consen 183 GEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIE 227 (297)
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhH
Confidence 34455555544433211 12235577778999999999998864
No 71
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=84.88 E-value=0.25 Score=30.88 Aligned_cols=21 Identities=43% Similarity=0.694 Sum_probs=18.2
Q ss_pred CCCCCeEEEecCCCCCCCCCC
Q 044687 85 SISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 85 ~i~~PtLliWG~~D~~iP~~~ 105 (111)
+-..|+|++.|+.|+.+|.+.
T Consensus 32 ~~~~piL~l~~~~Dp~TP~~~ 52 (103)
T PF08386_consen 32 PGAPPILVLGGTHDPVTPYEG 52 (103)
T ss_pred CCCCCEEEEecCcCCCCcHHH
Confidence 346899999999999999865
No 72
>PLN02965 Probable pheophorbidase
Probab=83.22 E-value=1.5 Score=30.90 Aligned_cols=23 Identities=13% Similarity=0.278 Sum_probs=18.0
Q ss_pred HHHHHHHhcC-CCEEEEecCchHH
Q 044687 2 ILDFLDEVVR-KPTVLIGIGDDWR 24 (111)
Q Consensus 2 i~~F~~~~~~-~p~~lvg~s~~~~ 24 (111)
|.++++++.. ++++|||+|++..
T Consensus 61 l~~~l~~l~~~~~~~lvGhSmGG~ 84 (255)
T PLN02965 61 LFALLSDLPPDHKVILVGHSIGGG 84 (255)
T ss_pred HHHHHHhcCCCCCEEEEecCcchH
Confidence 6678888765 5999999998433
No 73
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=82.77 E-value=0.94 Score=31.48 Aligned_cols=18 Identities=44% Similarity=1.090 Sum_probs=14.6
Q ss_pred CCCeEEEecCCCCCCCCC
Q 044687 87 SIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~ 104 (111)
+.|+++++|++|+++|.+
T Consensus 155 ~~pi~~~hG~~D~vvp~~ 172 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFE 172 (216)
T ss_dssp TS-EEEEEETT-SSSTHH
T ss_pred CCcEEEEecCCCCcccHH
Confidence 689999999999999974
No 74
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=82.59 E-value=1 Score=31.15 Aligned_cols=21 Identities=19% Similarity=0.074 Sum_probs=16.9
Q ss_pred CCCCCeEEEecCCCCCCCCCC
Q 044687 85 SISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 85 ~i~~PtLliWG~~D~~iP~~~ 105 (111)
....|++|++|++|.++|++.
T Consensus 166 ~~~p~~~i~hG~~D~vVp~~~ 186 (212)
T TIGR01840 166 GPTPIMSVVHGDADYTVLPGN 186 (212)
T ss_pred CCCCeEEEEEcCCCceeCcch
Confidence 344567899999999999965
No 75
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=81.83 E-value=0.67 Score=32.59 Aligned_cols=21 Identities=29% Similarity=0.577 Sum_probs=15.1
Q ss_pred CCCCCCCeEEEecCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~ 103 (111)
+.++++|+|+|-|++|.+.|.
T Consensus 111 vE~i~~piLli~g~dD~~WpS 131 (213)
T PF08840_consen 111 VEKIKGPILLISGEDDQIWPS 131 (213)
T ss_dssp GGG--SEEEEEEETT-SSS-H
T ss_pred HHHcCCCEEEEEeCCCCccch
Confidence 557899999999999999875
No 76
>PRK00870 haloalkane dehalogenase; Provisional
Probab=81.67 E-value=1.9 Score=31.27 Aligned_cols=23 Identities=4% Similarity=-0.013 Sum_probs=18.8
Q ss_pred HHHHHHHhcCCCEEEEecCchHH
Q 044687 2 ILDFLDEVVRKPTVLIGIGDDWR 24 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~~~ 24 (111)
|.+|++++..+++++||+|++..
T Consensus 105 l~~~l~~l~~~~v~lvGhS~Gg~ 127 (302)
T PRK00870 105 MRSWFEQLDLTDVTLVCQDWGGL 127 (302)
T ss_pred HHHHHHHcCCCCEEEEEEChHHH
Confidence 56788888889999999988433
No 77
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=81.14 E-value=1.1 Score=36.20 Aligned_cols=28 Identities=21% Similarity=0.345 Sum_probs=24.6
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCCccc
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDRPVG 108 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~~~~ 108 (111)
-.|++|++|+.|+-|..|.++|+.++++
T Consensus 291 ~DLr~Ir~Piivfas~gDnITPP~QaL~ 318 (581)
T PF11339_consen 291 VDLRNIRSPIIVFASYGDNITPPQQALN 318 (581)
T ss_pred eehhhCCCCEEEEeccCCCCCChhHhcc
Confidence 3589999999999999999999987643
No 78
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=79.91 E-value=2.1 Score=30.53 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=20.2
Q ss_pred CHHHHHHHhc---CCCEEEEecCchHHHHhh
Q 044687 1 LILDFLDEVV---RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 1 qi~~F~~~~~---~~p~~lvg~s~~~~v~~l 28 (111)
||++|++++- +..|.|||+|++..+++.
T Consensus 61 ~l~~fI~~Vl~~TGakVDIVgHS~G~~iaR~ 91 (219)
T PF01674_consen 61 QLRAFIDAVLAYTGAKVDIVGHSMGGTIARY 91 (219)
T ss_dssp HHHHHHHHHHHHHT--EEEEEETCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCEEEEEEcCCcCHHHHH
Confidence 5788998865 459999999996665554
No 79
>PLN02872 triacylglycerol lipase
Probab=79.86 E-value=1.4 Score=34.09 Aligned_cols=22 Identities=23% Similarity=0.508 Sum_probs=18.9
Q ss_pred CCCC--CCCeEEEecCCCCCCCCC
Q 044687 83 MPSI--SIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 83 l~~i--~~PtLliWG~~D~~iP~~ 104 (111)
+.++ ++|++++||++|.+++++
T Consensus 319 l~~i~~~~Pv~i~~G~~D~lv~~~ 342 (395)
T PLN02872 319 LSLIPKSLPLWMGYGGTDGLADVT 342 (395)
T ss_pred cccCCCCccEEEEEcCCCCCCCHH
Confidence 5677 579999999999999875
No 80
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=77.49 E-value=1.5 Score=31.81 Aligned_cols=26 Identities=19% Similarity=0.372 Sum_probs=22.4
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.+...++++|+|++-|+.|.++|++.
T Consensus 157 ~~D~~~vk~Pilfl~ae~D~~~p~~~ 182 (242)
T KOG3043|consen 157 SADIANVKAPILFLFAELDEDVPPKD 182 (242)
T ss_pred hhHHhcCCCCEEEEeecccccCCHHH
Confidence 35678899999999999999999853
No 81
>PLN02442 S-formylglutathione hydrolase
Probab=75.56 E-value=2.7 Score=30.67 Aligned_cols=21 Identities=24% Similarity=0.398 Sum_probs=18.4
Q ss_pred CCCCCCCeEEEecCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~ 103 (111)
+...++|+++++|++|.++|.
T Consensus 213 ~~~~~~pvli~~G~~D~~v~~ 233 (283)
T PLN02442 213 FNDVSATILIDQGEADKFLKE 233 (283)
T ss_pred ccccCCCEEEEECCCCccccc
Confidence 456789999999999999886
No 82
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=75.32 E-value=1.7 Score=35.35 Aligned_cols=24 Identities=21% Similarity=0.328 Sum_probs=21.7
Q ss_pred cCCCCCCCeEEEecCCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.|++|+||++++-|++|.++|.+.
T Consensus 436 dL~~I~~Pvl~va~~~DHIvPw~s 459 (560)
T TIGR01839 436 DLKKVKCDSFSVAGTNDHITPWDA 459 (560)
T ss_pred chhcCCCCeEEEecCcCCcCCHHH
Confidence 488999999999999999999853
No 83
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=74.39 E-value=2 Score=30.10 Aligned_cols=25 Identities=36% Similarity=0.566 Sum_probs=20.3
Q ss_pred hcCCCCC-CCeEEEecCCCCCCCCCC
Q 044687 81 QLMPSIS-IPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 81 ~~l~~i~-~PtLliWG~~D~~iP~~~ 105 (111)
..+.++. +|+|+++|++|..+|.+.
T Consensus 225 ~~~~~i~~~P~l~~~G~~D~~vp~~~ 250 (299)
T COG1073 225 DDAEKISPRPVLLVHGERDEVVPLRD 250 (299)
T ss_pred hhHhhcCCcceEEEecCCCcccchhh
Confidence 3455666 799999999999999865
No 84
>PRK10673 acyl-CoA esterase; Provisional
Probab=74.25 E-value=3.4 Score=28.63 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=17.1
Q ss_pred HHHHHHHhcCCCEEEEecCc
Q 044687 2 ILDFLDEVVRKPTVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~ 21 (111)
+.++++++..++++|||+|+
T Consensus 71 ~~~~l~~l~~~~~~lvGhS~ 90 (255)
T PRK10673 71 LLDTLDALQIEKATFIGHSM 90 (255)
T ss_pred HHHHHHHcCCCceEEEEECH
Confidence 56788888889999999988
No 85
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=74.18 E-value=4.4 Score=29.24 Aligned_cols=24 Identities=21% Similarity=0.414 Sum_probs=17.9
Q ss_pred HHHHHHHhc-CCCEEEEecCchHHH
Q 044687 2 ILDFLDEVV-RKPTVLIGIGDDWRI 25 (111)
Q Consensus 2 i~~F~~~~~-~~p~~lvg~s~~~~v 25 (111)
|.+++++.. +++++|||+|++..+
T Consensus 76 l~~~i~~l~~~~~v~lvGhS~GG~v 100 (273)
T PLN02211 76 LIDFLSSLPENEKVILVGHSAGGLS 100 (273)
T ss_pred HHHHHHhcCCCCCEEEEEECchHHH
Confidence 567777764 589999999994443
No 86
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=74.14 E-value=2.7 Score=30.14 Aligned_cols=22 Identities=41% Similarity=0.841 Sum_probs=19.9
Q ss_pred CCCCCCCeEEEecCCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~~ 104 (111)
-.++++|+|+.+|++|..+|.+
T Consensus 154 ~~~~~~pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 154 APKIKVPVLLHLAGEDPYIPAA 175 (236)
T ss_pred cccccCcEEEEecccCCCCChh
Confidence 4589999999999999999975
No 87
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=73.38 E-value=4.1 Score=31.19 Aligned_cols=24 Identities=25% Similarity=0.304 Sum_probs=17.7
Q ss_pred HHHHHHHh--cCCCEEEEecCchHHH
Q 044687 2 ILDFLDEV--VRKPTVLIGIGDDWRI 25 (111)
Q Consensus 2 i~~F~~~~--~~~p~~lvg~s~~~~v 25 (111)
++|.+.+. +.+||.|||+|++.|+
T Consensus 208 LA~~L~~~~~G~RpVtLvG~SLGarv 233 (345)
T PF05277_consen 208 LADALLSRNQGERPVTLVGHSLGARV 233 (345)
T ss_pred HHHHHHHhcCCCCceEEEeecccHHH
Confidence 45556554 5689999999997664
No 88
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=73.16 E-value=3 Score=31.03 Aligned_cols=20 Identities=20% Similarity=0.213 Sum_probs=16.5
Q ss_pred HHHHHHHhcCCC-EEEEecCc
Q 044687 2 ILDFLDEVVRKP-TVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p-~~lvg~s~ 21 (111)
+.+|++++..++ ++|||+|+
T Consensus 127 l~~ll~~l~l~~~~~lvG~Sm 147 (343)
T PRK08775 127 IALLLDALGIARLHAFVGYSY 147 (343)
T ss_pred HHHHHHHcCCCcceEEEEECH
Confidence 678999988765 57999988
No 89
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=70.79 E-value=3.6 Score=28.70 Aligned_cols=22 Identities=23% Similarity=0.505 Sum_probs=18.9
Q ss_pred hcCCCCCCCeEEEecCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTP 102 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP 102 (111)
+-|..++.||||+.|..|.+=.
T Consensus 136 ~HL~gl~tPtli~qGtrD~fGt 157 (213)
T COG3571 136 EHLTGLKTPTLITQGTRDEFGT 157 (213)
T ss_pred hhccCCCCCeEEeecccccccC
Confidence 5688999999999999998643
No 90
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=67.57 E-value=3.3 Score=34.86 Aligned_cols=26 Identities=23% Similarity=0.165 Sum_probs=22.0
Q ss_pred hhcCCCCCCCeEEEecCCCCCCCCCC
Q 044687 80 VQLMPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 80 ~~~l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
...+.+|++|+|+++|.+|..+++++
T Consensus 448 ~~~~~kIkvPvLlIhGw~D~~V~~~~ 473 (767)
T PRK05371 448 LKDADKIKASVLVVHGLNDWNVKPKQ 473 (767)
T ss_pred hhHhhCCCCCEEEEeeCCCCCCChHH
Confidence 35577999999999999999998654
No 91
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=64.50 E-value=5.6 Score=29.35 Aligned_cols=19 Identities=32% Similarity=0.625 Sum_probs=17.1
Q ss_pred CCCeEEEecCCCCCCCCCC
Q 044687 87 SIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~~ 105 (111)
+.|++|.+|..|.++|...
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~ 237 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPAD 237 (290)
T ss_pred CCCEEEEecCCCCCCChHH
Confidence 6899999999999999853
No 92
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=63.56 E-value=6.9 Score=29.18 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=16.5
Q ss_pred HHHHHHHhcCCC-EEEEecCc
Q 044687 2 ILDFLDEVVRKP-TVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p-~~lvg~s~ 21 (111)
+.++++++..++ ++|||+|+
T Consensus 116 ~~~~~~~l~~~~~~~l~G~S~ 136 (351)
T TIGR01392 116 QKLLLDHLGIEQIAAVVGGSM 136 (351)
T ss_pred HHHHHHHcCCCCceEEEEECH
Confidence 457788887787 99999988
No 93
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=63.29 E-value=5.2 Score=31.58 Aligned_cols=23 Identities=30% Similarity=0.446 Sum_probs=20.9
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.|.+|+||++.+-|++|.+.|.+
T Consensus 325 dL~~It~pvy~~a~~~DhI~P~~ 347 (445)
T COG3243 325 DLGDITCPVYNLAAEEDHIAPWS 347 (445)
T ss_pred chhhcccceEEEeecccccCCHH
Confidence 37899999999999999999875
No 94
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=63.01 E-value=9.3 Score=30.14 Aligned_cols=25 Identities=8% Similarity=-0.154 Sum_probs=17.1
Q ss_pred HHHHHHhcCCCEEEEecCchHHHHh
Q 044687 3 LDFLDEVVRKPTVLIGIGDDWRIKL 27 (111)
Q Consensus 3 ~~F~~~~~~~p~~lvg~s~~~~v~~ 27 (111)
.++.++..++||+|||||++..+..
T Consensus 153 e~~~~~~g~~kV~LVGHSMGGlva~ 177 (440)
T PLN02733 153 ETVYKASGGKKVNIISHSMGGLLVK 177 (440)
T ss_pred HHHHHHcCCCCEEEEEECHhHHHHH
Confidence 3444455678999999999554433
No 95
>PRK14747 cytochrome b6-f complex subunit PetN; Provisional
Probab=62.86 E-value=5.4 Score=19.35 Aligned_cols=8 Identities=38% Similarity=1.228 Sum_probs=6.5
Q ss_pred eEEEecCC
Q 044687 90 VLVLWGDE 97 (111)
Q Consensus 90 tLliWG~~ 97 (111)
.|++||++
T Consensus 20 slVVWGRn 27 (29)
T PRK14747 20 AMVVWGRN 27 (29)
T ss_pred eEEEEecC
Confidence 58999975
No 96
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=62.81 E-value=8 Score=30.58 Aligned_cols=27 Identities=11% Similarity=0.156 Sum_probs=19.3
Q ss_pred HHHHHHHhc------CCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVV------RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~------~~p~~lvg~s~~~~v~~l 28 (111)
|++|++.+. .+.++|||+|++..+...
T Consensus 103 la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ 135 (442)
T TIGR03230 103 VAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGI 135 (442)
T ss_pred HHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHH
Confidence 567777653 489999999996555443
No 97
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=62.31 E-value=2.9 Score=32.63 Aligned_cols=25 Identities=20% Similarity=0.349 Sum_probs=21.9
Q ss_pred cCCCCC-CCeEEEecCCCCCCCCCCc
Q 044687 82 LMPSIS-IPVLVLWGDEDPFTPLDRP 106 (111)
Q Consensus 82 ~l~~i~-~PtLliWG~~D~~iP~~~~ 106 (111)
.+++|+ +|+|.+=|++|.++|++..
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt 357 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQT 357 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHh
Confidence 377999 9999999999999998653
No 98
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=62.29 E-value=3.9 Score=30.78 Aligned_cols=27 Identities=26% Similarity=0.443 Sum_probs=14.6
Q ss_pred ChhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 78 NPVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 78 ~~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+.++.|.+|+|++.+.+|..+|..
T Consensus 223 ~l~~tfG~v~~plLvl~Sg~DEyvP~~ 249 (303)
T PF08538_consen 223 RLKKTFGKVSKPLLVLYSGKDEYVPPW 249 (303)
T ss_dssp HHHHTGGG--S-EEEEEE--TT-----
T ss_pred HHHHHhccCCCceEEEecCCCceeccc
Confidence 455678899999999999999999974
No 99
>KOG1783 consensus Small nuclear ribonucleoprotein F [RNA processing and modification]
Probab=60.56 E-value=8 Score=23.00 Aligned_cols=17 Identities=18% Similarity=0.270 Sum_probs=14.0
Q ss_pred HHHHHHhcCCCEEEEec
Q 044687 3 LDFLDEVVRKPTVLIGI 19 (111)
Q Consensus 3 ~~F~~~~~~~p~~lvg~ 19 (111)
.+|+.+++|+||.+==+
T Consensus 8 ~~fl~~iiGr~V~VKl~ 24 (77)
T KOG1783|consen 8 GEFLKAIIGRTVVVKLN 24 (77)
T ss_pred HHHHHHHhCCeEEEEec
Confidence 68999999999887543
No 100
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=60.56 E-value=8.3 Score=30.25 Aligned_cols=26 Identities=23% Similarity=0.561 Sum_probs=22.8
Q ss_pred hhhcCCCCCCCeEEEecCCCCCCCCC
Q 044687 79 PVQLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 79 ~~~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
....+.+|++|+|.|.-.+|+++|.+
T Consensus 314 s~~~v~~I~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 314 SSNYVDKIKVPLLCINAADDPVVPEE 339 (409)
T ss_pred hhhhcccccccEEEEecCCCCCCCcc
Confidence 34668899999999999999999984
No 101
>CHL00009 petN cytochrome b6/f complex subunit VIII
Probab=59.91 E-value=6.6 Score=19.08 Aligned_cols=8 Identities=50% Similarity=1.203 Sum_probs=6.5
Q ss_pred eEEEecCC
Q 044687 90 VLVLWGDE 97 (111)
Q Consensus 90 tLliWG~~ 97 (111)
.|++||++
T Consensus 20 slVVWGR~ 27 (29)
T CHL00009 20 SLVVWGRS 27 (29)
T ss_pred EEEEEecc
Confidence 58999975
No 102
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=58.83 E-value=9.4 Score=28.96 Aligned_cols=20 Identities=15% Similarity=0.130 Sum_probs=17.1
Q ss_pred HHHHHHHhcCCC-EEEEecCc
Q 044687 2 ILDFLDEVVRKP-TVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p-~~lvg~s~ 21 (111)
+.+|++++..++ ++|||+|+
T Consensus 136 ~~~~l~~l~~~~~~~lvG~S~ 156 (379)
T PRK00175 136 QARLLDALGITRLAAVVGGSM 156 (379)
T ss_pred HHHHHHHhCCCCceEEEEECH
Confidence 578899988888 59999988
No 103
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=57.90 E-value=8.5 Score=28.07 Aligned_cols=27 Identities=26% Similarity=0.266 Sum_probs=18.9
Q ss_pred HHHHHHHhc------CCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVV------RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~------~~p~~lvg~s~~~~v~~l 28 (111)
+.+|++.+. .++++|||+|++..+...
T Consensus 96 la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~ 128 (275)
T cd00707 96 LAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGF 128 (275)
T ss_pred HHHHHHHHHHhcCCChHHEEEEEecHHHHHHHH
Confidence 456666653 368999999996665554
No 104
>PRK02529 petN cytochrome b6-f complex subunit PetN; Provisional
Probab=57.69 E-value=7.4 Score=19.42 Aligned_cols=9 Identities=33% Similarity=1.095 Sum_probs=7.0
Q ss_pred eEEEecCCC
Q 044687 90 VLVLWGDED 98 (111)
Q Consensus 90 tLliWG~~D 98 (111)
.|++||++-
T Consensus 19 slVVWGRnG 27 (33)
T PRK02529 19 AMVVWGRNG 27 (33)
T ss_pred EEEEEecCC
Confidence 589999763
No 105
>COG4099 Predicted peptidase [General function prediction only]
Probab=56.39 E-value=10 Score=29.00 Aligned_cols=21 Identities=19% Similarity=0.472 Sum_probs=18.4
Q ss_pred CCCeEEEecCCCCCCCCCCcc
Q 044687 87 SIPVLVLWGDEDPFTPLDRPV 107 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~~~~ 107 (111)
+.|..++++.+|+++|++.+.
T Consensus 315 ~~piWvfhs~dDkv~Pv~nSr 335 (387)
T COG4099 315 KAPIWVFHSSDDKVIPVSNSR 335 (387)
T ss_pred cCceEEEEecCCCccccCcce
Confidence 479999999999999998754
No 106
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=56.00 E-value=4.7 Score=30.29 Aligned_cols=26 Identities=31% Similarity=0.461 Sum_probs=18.1
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCCc
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDRP 106 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~~ 106 (111)
..-++|++|+++-+|=.|++.|++..
T Consensus 256 nfA~ri~~pvl~~~gl~D~~cPP~t~ 281 (320)
T PF05448_consen 256 NFARRIKCPVLFSVGLQDPVCPPSTQ 281 (320)
T ss_dssp HHGGG--SEEEEEEETT-SSS-HHHH
T ss_pred HHHHHcCCCEEEEEecCCCCCCchhH
Confidence 34568899999999999999998643
No 107
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=54.96 E-value=9.5 Score=29.36 Aligned_cols=20 Identities=20% Similarity=0.303 Sum_probs=17.8
Q ss_pred HHHHHHHhcCCCEEEEecCc
Q 044687 2 ILDFLDEVVRKPTVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~ 21 (111)
|.+|++++..++++|||+|+
T Consensus 187 l~~~i~~l~~~~~~LvG~s~ 206 (383)
T PLN03084 187 LESLIDELKSDKVSLVVQGY 206 (383)
T ss_pred HHHHHHHhCCCCceEEEECH
Confidence 67899999999999999876
No 108
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=54.60 E-value=16 Score=28.17 Aligned_cols=20 Identities=10% Similarity=0.067 Sum_probs=16.1
Q ss_pred HHHHHHHhcCCCEEEEecCc
Q 044687 2 ILDFLDEVVRKPTVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~ 21 (111)
+.+|++++..++++|+|+|+
T Consensus 166 i~~~~~~l~~~~~~lvGhS~ 185 (402)
T PLN02894 166 FEEWRKAKNLSNFILLGHSF 185 (402)
T ss_pred HHHHHHHcCCCCeEEEEECH
Confidence 34667777778999999988
No 109
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=53.95 E-value=18 Score=25.67 Aligned_cols=19 Identities=11% Similarity=0.085 Sum_probs=15.2
Q ss_pred cCCCEEEEecCchHHHHhh
Q 044687 10 VRKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 10 ~~~p~~lvg~s~~~~v~~l 28 (111)
..+++++||||++..+.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~ 101 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARS 101 (225)
T ss_pred CCCceEEEEEchhhHHHHH
Confidence 3689999999997766664
No 110
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=53.84 E-value=9 Score=31.73 Aligned_cols=23 Identities=17% Similarity=0.573 Sum_probs=19.7
Q ss_pred CCC-CCCeEEEecCCCCCCCCCCc
Q 044687 84 PSI-SIPVLVLWGDEDPFTPLDRP 106 (111)
Q Consensus 84 ~~i-~~PtLliWG~~D~~iP~~~~ 106 (111)
.+| ..|+++++|+.|-.+|+.+.
T Consensus 551 g~L~GKPaIiVhGR~DaLlPvnh~ 574 (690)
T PF10605_consen 551 GNLHGKPAIIVHGRSDALLPVNHT 574 (690)
T ss_pred CCcCCCceEEEecccceecccCCC
Confidence 356 58999999999999999764
No 111
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=52.44 E-value=9.3 Score=31.12 Aligned_cols=19 Identities=21% Similarity=0.371 Sum_probs=15.6
Q ss_pred hcCCCEEEEecCchHHHHh
Q 044687 9 VVRKPTVLIGIGDDWRIKL 27 (111)
Q Consensus 9 ~~~~p~~lvg~s~~~~v~~ 27 (111)
.+.+||.|||+|++.|+--
T Consensus 444 qG~RPVTLVGFSLGARvIf 462 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIF 462 (633)
T ss_pred cCCCceeEeeeccchHHHH
Confidence 4579999999999877554
No 112
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=52.42 E-value=14 Score=26.27 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=16.2
Q ss_pred HHHHHHhc-CCCEEEEecCchHH
Q 044687 3 LDFLDEVV-RKPTVLIGIGDDWR 24 (111)
Q Consensus 3 ~~F~~~~~-~~p~~lvg~s~~~~ 24 (111)
..||+..- |+|+||+|||-+..
T Consensus 85 ~~yL~~~n~GRPfILaGHSQGs~ 107 (207)
T PF11288_consen 85 DYYLANYNNGRPFILAGHSQGSM 107 (207)
T ss_pred HHHHHhcCCCCCEEEEEeChHHH
Confidence 35777764 68999999987443
No 113
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=50.52 E-value=13 Score=26.58 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=15.8
Q ss_pred CCeEEEecCCCCCCCCCC
Q 044687 88 IPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 88 ~PtLliWG~~D~~iP~~~ 105 (111)
.|++|+||+.|..+.+..
T Consensus 170 ~P~~v~hG~~D~tV~~~n 187 (220)
T PF10503_consen 170 YPRIVFHGTADTTVNPQN 187 (220)
T ss_pred CCEEEEecCCCCccCcch
Confidence 599999999999998754
No 114
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=50.03 E-value=21 Score=25.46 Aligned_cols=27 Identities=19% Similarity=0.231 Sum_probs=20.3
Q ss_pred HHHHHHHhc----CCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVV----RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~----~~p~~lvg~s~~~~v~~l 28 (111)
+.+|++++. .+.++++||||+.++-..
T Consensus 79 l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~ 109 (233)
T PF05990_consen 79 LARFLRDLARAPGIKRIHILAHSMGNRVLLE 109 (233)
T ss_pred HHHHHHHHHhccCCceEEEEEeCchHHHHHH
Confidence 467777765 568999999998875443
No 115
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=49.79 E-value=12 Score=27.15 Aligned_cols=23 Identities=26% Similarity=0.590 Sum_probs=20.3
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
....|++|+|=|.|+.|.++|..
T Consensus 158 ~~~~i~~PSLHi~G~~D~iv~~~ 180 (230)
T KOG2551|consen 158 YKRPLSTPSLHIFGETDTIVPSE 180 (230)
T ss_pred hccCCCCCeeEEecccceeecch
Confidence 35589999999999999999975
No 116
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=49.73 E-value=20 Score=26.06 Aligned_cols=20 Identities=15% Similarity=0.039 Sum_probs=15.8
Q ss_pred HHHHHHHhcCCCEEEEecCc
Q 044687 2 ILDFLDEVVRKPTVLIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~ 21 (111)
+..+++++..+++++||+|+
T Consensus 85 l~~l~~~l~~~~~~lvG~S~ 104 (306)
T TIGR01249 85 IEKLREKLGIKNWLVFGGSW 104 (306)
T ss_pred HHHHHHHcCCCCEEEEEECH
Confidence 44567777778999999987
No 117
>PRK10115 protease 2; Provisional
Probab=49.32 E-value=13 Score=30.93 Aligned_cols=24 Identities=21% Similarity=0.152 Sum_probs=19.2
Q ss_pred cCCCCCCC-eEEEecCCCCCCCCCC
Q 044687 82 LMPSISIP-VLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l~~i~~P-tLliWG~~D~~iP~~~ 105 (111)
.+.+++.| +||+.|.+|.-+|+.+
T Consensus 600 ~v~~~~~P~lLi~~g~~D~RV~~~~ 624 (686)
T PRK10115 600 NVTAQAYPHLLVTTGLHDSQVQYWE 624 (686)
T ss_pred ccCccCCCceeEEecCCCCCcCchH
Confidence 35677889 5567999999999876
No 118
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=47.24 E-value=15 Score=28.82 Aligned_cols=24 Identities=29% Similarity=0.775 Sum_probs=17.0
Q ss_pred cC--CCCCCCeEEEecCCCCCCCCCC
Q 044687 82 LM--PSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 82 ~l--~~i~~PtLliWG~~D~~iP~~~ 105 (111)
.| .+.++|+|.+-|++|++.|.++
T Consensus 345 lL~~rr~~~plL~i~~~~D~v~P~eD 370 (411)
T PF06500_consen 345 LLSGRRCPTPLLAINGEDDPVSPIED 370 (411)
T ss_dssp TTTSS-BSS-EEEEEETT-SSS-HHH
T ss_pred cccCCCCCcceEEeecCCCCCCCHHH
Confidence 45 6888999999999999999754
No 119
>PRK10749 lysophospholipase L2; Provisional
Probab=46.84 E-value=28 Score=25.69 Aligned_cols=25 Identities=8% Similarity=0.005 Sum_probs=17.3
Q ss_pred HHHHHHHh----cCCCEEEEecCchHHHH
Q 044687 2 ILDFLDEV----VRKPTVLIGIGDDWRIK 26 (111)
Q Consensus 2 i~~F~~~~----~~~p~~lvg~s~~~~v~ 26 (111)
+.++++.+ ...|++++|+|++..+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~l~GhSmGG~ia 145 (330)
T PRK10749 117 LAAFWQQEIQPGPYRKRYALAHSMGGAIL 145 (330)
T ss_pred HHHHHHHHHhcCCCCCeEEEEEcHHHHHH
Confidence 34566665 45799999999855544
No 120
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=46.12 E-value=18 Score=26.10 Aligned_cols=18 Identities=22% Similarity=0.233 Sum_probs=16.0
Q ss_pred CCCCeEEEecCCCCCCCC
Q 044687 86 ISIPVLVLWGDEDPFTPL 103 (111)
Q Consensus 86 i~~PtLliWG~~D~~iP~ 103 (111)
...|+++.+|++|+.+|.
T Consensus 210 ~~~plli~~G~~D~~v~~ 227 (275)
T TIGR02821 210 RHSTILIDQGTADQFLDE 227 (275)
T ss_pred cCCCeeEeecCCCcccCc
Confidence 467999999999999997
No 121
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=44.13 E-value=20 Score=26.32 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=20.6
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCC
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
..+++.+.|.|.+-|.+|.++|+-
T Consensus 215 ~ki~~~~~P~LFiSGlkDelVPP~ 238 (300)
T KOG4391|consen 215 RKIGQCRMPFLFISGLKDELVPPV 238 (300)
T ss_pred hhhccccCceEEeecCccccCCcH
Confidence 346677899999999999999984
No 122
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=44.03 E-value=19 Score=27.76 Aligned_cols=20 Identities=5% Similarity=0.026 Sum_probs=16.4
Q ss_pred HHHHHHHhcCCCEE-EEecCc
Q 044687 2 ILDFLDEVVRKPTV-LIGIGD 21 (111)
Q Consensus 2 i~~F~~~~~~~p~~-lvg~s~ 21 (111)
+.++++++..++++ +||+|+
T Consensus 150 ~~~ll~~lgi~~~~~vvG~Sm 170 (389)
T PRK06765 150 QKELIKSLGIARLHAVMGPSM 170 (389)
T ss_pred HHHHHHHcCCCCceEEEEECH
Confidence 46788888888886 999987
No 123
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=42.92 E-value=32 Score=25.16 Aligned_cols=23 Identities=22% Similarity=0.193 Sum_probs=16.8
Q ss_pred HHHHHhcCCCEEEEecCchHHHH
Q 044687 4 DFLDEVVRKPTVLIGIGDDWRIK 26 (111)
Q Consensus 4 ~F~~~~~~~p~~lvg~s~~~~v~ 26 (111)
+++++...+|++|+|+|++..+.
T Consensus 91 ~~L~~~~~~~v~LvG~SmGG~vA 113 (266)
T TIGR03101 91 RWLIEQGHPPVTLWGLRLGALLA 113 (266)
T ss_pred HHHHhcCCCCEEEEEECHHHHHH
Confidence 46666666899999999855443
No 124
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=42.76 E-value=22 Score=27.32 Aligned_cols=17 Identities=24% Similarity=0.063 Sum_probs=13.5
Q ss_pred CCCEEEEecCchHHHHh
Q 044687 11 RKPTVLIGIGDDWRIKL 27 (111)
Q Consensus 11 ~~p~~lvg~s~~~~v~~ 27 (111)
++||+|||||++..+..
T Consensus 118 ~~kv~li~HSmGgl~~~ 134 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVAR 134 (389)
T ss_pred CCcEEEEEeCCCchHHH
Confidence 79999999999555444
No 125
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=39.00 E-value=27 Score=27.94 Aligned_cols=16 Identities=25% Similarity=-0.060 Sum_probs=12.5
Q ss_pred hcCCCEEEEecCchHH
Q 044687 9 VVRKPTVLIGIGDDWR 24 (111)
Q Consensus 9 ~~~~p~~lvg~s~~~~ 24 (111)
-+++||+||+|||+..
T Consensus 179 ~G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 179 NGGKKVVLISHSMGGL 194 (473)
T ss_pred cCCCceEEEecCCccH
Confidence 4469999999999443
No 126
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=37.76 E-value=81 Score=23.57 Aligned_cols=25 Identities=32% Similarity=0.543 Sum_probs=16.3
Q ss_pred CChhhcCCCCCCCeEEEecCCCCCC
Q 044687 77 PNPVQLMPSISIPVLVLWGDEDPFT 101 (111)
Q Consensus 77 ~~~~~~l~~i~~PtLliWG~~D~~i 101 (111)
.++...+....||||++=|++.+..
T Consensus 209 ~DL~~~~~~~~c~vLlvvG~~Sp~~ 233 (283)
T PF03096_consen 209 TDLSIERPSLGCPVLLVVGDNSPHV 233 (283)
T ss_dssp ----SECTTCCS-EEEEEETTSTTH
T ss_pred ccchhhcCCCCCCeEEEEecCCcch
Confidence 3556667888899999999887653
No 127
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=36.97 E-value=38 Score=24.57 Aligned_cols=27 Identities=11% Similarity=0.105 Sum_probs=21.2
Q ss_pred HHHHHHHhcCCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVVRKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~~~v~~l 28 (111)
+.+.|++.+.+|..++|+|+++..+..
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~ 92 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAV 92 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHH
Confidence 456678888899999999997765554
No 128
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=36.63 E-value=27 Score=25.75 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=21.8
Q ss_pred HHHHHHHhcCCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVVRKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~~~v~~l 28 (111)
+.+.|++.+.+|..++|+|++|-.+..
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~ 100 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALV 100 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHH
T ss_pred hhhhhcccccccceeeccchhhHHHHH
Confidence 456788888899999999998876554
No 129
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=36.56 E-value=44 Score=25.29 Aligned_cols=27 Identities=19% Similarity=0.219 Sum_probs=20.1
Q ss_pred HHHHHHHhc------CCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVV------RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~------~~p~~lvg~s~~~~v~~l 28 (111)
|++||+.+. .+-++|||+|++..+...
T Consensus 134 la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~ 166 (331)
T PF00151_consen 134 LAKFLSFLINNFGVPPENIHLIGHSLGAHVAGF 166 (331)
T ss_dssp HHHHHHHHHHHH---GGGEEEEEETCHHHHHHH
T ss_pred HHHHHHHHHhhcCCChhHEEEEeeccchhhhhh
Confidence 566777655 367999999997776665
No 130
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=36.45 E-value=33 Score=26.03 Aligned_cols=21 Identities=29% Similarity=0.430 Sum_probs=18.9
Q ss_pred CCCCCCeEEEecCCCCCCCCC
Q 044687 84 PSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 84 ~~i~~PtLliWG~~D~~iP~~ 104 (111)
.....|||.+.|.++..+|.+
T Consensus 250 ~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 250 GPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred cccccceeEEecCCCCCcChh
Confidence 677889999999999999976
No 131
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=36.37 E-value=16 Score=26.06 Aligned_cols=18 Identities=33% Similarity=0.776 Sum_probs=16.3
Q ss_pred CCCeEEEecCCCCCCCCC
Q 044687 87 SIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 87 ~~PtLliWG~~D~~iP~~ 104 (111)
..|.+..+|+.|+++|..
T Consensus 144 ~~~i~~~Hg~~d~~vp~~ 161 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFR 161 (206)
T ss_pred cchhheecccCCceeehH
Confidence 579999999999999974
No 132
>PRK10162 acetyl esterase; Provisional
Probab=35.89 E-value=8.7 Score=28.47 Aligned_cols=16 Identities=19% Similarity=0.262 Sum_probs=14.0
Q ss_pred CCeEEEecCCCCCCCC
Q 044687 88 IPVLVLWGDEDPFTPL 103 (111)
Q Consensus 88 ~PtLliWG~~D~~iP~ 103 (111)
.|++|++|+.|+..+-
T Consensus 249 Pp~~i~~g~~D~L~de 264 (318)
T PRK10162 249 PPCFIAGAEFDPLLDD 264 (318)
T ss_pred CCeEEEecCCCcCcCh
Confidence 6999999999998754
No 133
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=34.07 E-value=23 Score=27.69 Aligned_cols=23 Identities=22% Similarity=0.486 Sum_probs=19.7
Q ss_pred cCCCCCCCeEEEecCCCCCCCCC
Q 044687 82 LMPSISIPVLVLWGDEDPFTPLD 104 (111)
Q Consensus 82 ~l~~i~~PtLliWG~~D~~iP~~ 104 (111)
.+.+++.||.+.||++|-...++
T Consensus 327 ~l~~i~~P~~l~~g~~D~l~~~~ 349 (403)
T KOG2624|consen 327 DLTNIKVPTALYYGDNDWLADPE 349 (403)
T ss_pred CccccccCEEEEecCCcccCCHH
Confidence 46788999999999999887764
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=33.58 E-value=55 Score=23.08 Aligned_cols=24 Identities=13% Similarity=0.374 Sum_probs=17.0
Q ss_pred hhhcCCCCCC-CeEEEecCCCCCCC
Q 044687 79 PVQLMPSISI-PVLVLWGDEDPFTP 102 (111)
Q Consensus 79 ~~~~l~~i~~-PtLliWG~~D~~iP 102 (111)
....+++++. |++.|.|++|.-..
T Consensus 130 ~~pei~~l~~~~v~CiyG~~E~d~~ 154 (192)
T PF06057_consen 130 VIPEIAKLPPAPVQCIYGEDEDDSL 154 (192)
T ss_pred chHHHHhCCCCeEEEEEcCCCCCCc
Confidence 3445666664 99999999887543
No 135
>PRK05855 short chain dehydrogenase; Validated
Probab=33.17 E-value=57 Score=25.51 Aligned_cols=22 Identities=18% Similarity=0.209 Sum_probs=17.0
Q ss_pred HHHHHHHhcC-CCEEEEecCchH
Q 044687 2 ILDFLDEVVR-KPTVLIGIGDDW 23 (111)
Q Consensus 2 i~~F~~~~~~-~p~~lvg~s~~~ 23 (111)
+.++++.+.. +|++|||+|++.
T Consensus 83 l~~~i~~l~~~~~~~lvGhS~Gg 105 (582)
T PRK05855 83 FAAVIDAVSPDRPVHLLAHDWGS 105 (582)
T ss_pred HHHHHHHhCCCCcEEEEecChHH
Confidence 5678888764 579999999854
No 136
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=29.98 E-value=2.5e+02 Score=21.44 Aligned_cols=17 Identities=35% Similarity=0.774 Sum_probs=14.2
Q ss_pred CCCCCeEEEecCCCCCC
Q 044687 85 SISIPVLVLWGDEDPFT 101 (111)
Q Consensus 85 ~i~~PtLliWG~~D~~i 101 (111)
.++||||++=|++-+..
T Consensus 244 tlkc~vllvvGd~Sp~~ 260 (326)
T KOG2931|consen 244 TLKCPVLLVVGDNSPHV 260 (326)
T ss_pred cccccEEEEecCCCchh
Confidence 67799999999887654
No 137
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=28.04 E-value=64 Score=23.23 Aligned_cols=27 Identities=7% Similarity=0.024 Sum_probs=20.8
Q ss_pred HHHHHHHhcCCCEEEEecCchHHHHhh
Q 044687 2 ILDFLDEVVRKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 2 i~~F~~~~~~~p~~lvg~s~~~~v~~l 28 (111)
+.+.+++.+.+|..++|+|+++-.+..
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~ 98 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAY 98 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHH
Confidence 345677888899999999997765544
No 138
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=26.99 E-value=58 Score=27.13 Aligned_cols=17 Identities=18% Similarity=-0.021 Sum_probs=13.1
Q ss_pred CCCEEEEecCchHHHHh
Q 044687 11 RKPTVLIGIGDDWRIKL 27 (111)
Q Consensus 11 ~~p~~lvg~s~~~~v~~ 27 (111)
+++|+|||||++..+..
T Consensus 212 gkKVVLV~HSMGglv~l 228 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFL 228 (642)
T ss_pred CCeEEEEEeCCchHHHH
Confidence 68999999999554433
No 139
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=26.90 E-value=85 Score=20.23 Aligned_cols=18 Identities=11% Similarity=-0.110 Sum_probs=15.4
Q ss_pred CCCEEEEecCchHHHHhh
Q 044687 11 RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 11 ~~p~~lvg~s~~~~v~~l 28 (111)
...++++|+|++.-+..+
T Consensus 27 ~~~i~v~GHSlGg~lA~l 44 (153)
T cd00741 27 DYKIHVTGHSLGGALAGL 44 (153)
T ss_pred CCeEEEEEcCHHHHHHHH
Confidence 678999999998877776
No 140
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=26.41 E-value=54 Score=22.91 Aligned_cols=23 Identities=17% Similarity=0.198 Sum_probs=17.6
Q ss_pred CCCCCCCeEEEecCCCCCCCCCC
Q 044687 83 MPSISIPVLVLWGDEDPFTPLDR 105 (111)
Q Consensus 83 l~~i~~PtLliWG~~D~~iP~~~ 105 (111)
|+..+.-+|+---.+|..+|...
T Consensus 191 L~~F~~~~l~an~~~D~~V~~~s 213 (217)
T PF05057_consen 191 LKRFKRRVLYANIVNDRYVPFHS 213 (217)
T ss_pred HHhCCCEEEEEccCCCCccceec
Confidence 56677777777788999998754
No 141
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=26.12 E-value=3.6e+02 Score=21.93 Aligned_cols=23 Identities=17% Similarity=0.245 Sum_probs=18.9
Q ss_pred HHHHHHHhcCCC--EEEEecCchHH
Q 044687 2 ILDFLDEVVRKP--TVLIGIGDDWR 24 (111)
Q Consensus 2 i~~F~~~~~~~p--~~lvg~s~~~~ 24 (111)
|++.|+..+|.| |.|.|.|.+..
T Consensus 168 V~~NIe~FGGDp~NVTl~GeSAGa~ 192 (491)
T COG2272 168 VRDNIEAFGGDPQNVTLFGESAGAA 192 (491)
T ss_pred HHHHHHHhCCCccceEEeeccchHH
Confidence 678999999987 99999887443
No 142
>PF03742 PetN: PetN ; InterPro: IPR005497 PetN is a small hydrophobic protein, crucial for cytochrome b6-f complex assembly and/or stability. It is found in bacteria and plants. Cytochrome b6-f complex is composed of 4 large subunits: cytochrome b6, subunit IV (17 kDa polypeptide, petD), cytochrome f and the Rieske protein, as well as 4 small subunits: petG, petL, petM and petN. The complex functions as a dimer. The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI) [].; GO: 0045158 electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity, 0017004 cytochrome complex assembly, 0009512 cytochrome b6f complex; PDB: 2ZT9_H 2D2C_H 2E76_H 1VF5_U 2E75_H 2E74_H.
Probab=23.26 E-value=7.4 Score=18.93 Aligned_cols=7 Identities=57% Similarity=1.455 Sum_probs=3.4
Q ss_pred EEEecCC
Q 044687 91 LVLWGDE 97 (111)
Q Consensus 91 LliWG~~ 97 (111)
|++||++
T Consensus 21 lVVWGRn 27 (29)
T PF03742_consen 21 LVVWGRN 27 (29)
T ss_dssp HHHHHCC
T ss_pred eEEEecc
Confidence 4455543
No 143
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=22.89 E-value=90 Score=22.29 Aligned_cols=26 Identities=23% Similarity=0.017 Sum_probs=19.3
Q ss_pred HHHHHHhc-CCCEEEEecCchHHHHhh
Q 044687 3 LDFLDEVV-RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 3 ~~F~~~~~-~~p~~lvg~s~~~~v~~l 28 (111)
.+.|++.+ .+|..++|+|++|..+..
T Consensus 73 ~~~l~~~g~i~p~~v~GhS~GE~aAa~ 99 (290)
T TIGR00128 73 YLKLKEQGGLKPDFAAGHSLGEYSALV 99 (290)
T ss_pred HHHHHHcCCCCCCEEeecCHHHHHHHH
Confidence 34566666 789999999997765544
No 144
>PRK04940 hypothetical protein; Provisional
Probab=22.86 E-value=68 Score=22.30 Aligned_cols=18 Identities=22% Similarity=0.307 Sum_probs=12.7
Q ss_pred eEEEecCCCCCCCCCCcc
Q 044687 90 VLVLWGDEDPFTPLDRPV 107 (111)
Q Consensus 90 tLliWG~~D~~iP~~~~~ 107 (111)
.+++=.+.|.+++..+++
T Consensus 127 ~~vllq~gDEvLDyr~a~ 144 (180)
T PRK04940 127 CLVILSRNDEVLDSQRTA 144 (180)
T ss_pred EEEEEeCCCcccCHHHHH
Confidence 477778888887765544
No 145
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=21.42 E-value=1.3e+02 Score=18.75 Aligned_cols=18 Identities=17% Similarity=0.069 Sum_probs=14.3
Q ss_pred CCCEEEEecCchHHHHhh
Q 044687 11 RKPTVLIGIGDDWRIKLL 28 (111)
Q Consensus 11 ~~p~~lvg~s~~~~v~~l 28 (111)
...+++.|||++.-++.+
T Consensus 63 ~~~i~itGHSLGGalA~l 80 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASL 80 (140)
T ss_dssp TSEEEEEEETHHHHHHHH
T ss_pred CccchhhccchHHHHHHH
Confidence 356999999998876666
No 146
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=21.33 E-value=53 Score=24.83 Aligned_cols=28 Identities=32% Similarity=0.497 Sum_probs=23.4
Q ss_pred hcCCCCCCCeEEEecCCCCCCCCCCccc
Q 044687 81 QLMPSISIPVLVLWGDEDPFTPLDRPVG 108 (111)
Q Consensus 81 ~~l~~i~~PtLliWG~~D~~iP~~~~~~ 108 (111)
..-++++.|+|+.=|=-|++.|++...|
T Consensus 253 n~A~RiK~pvL~svgL~D~vcpPstqFA 280 (321)
T COG3458 253 NLAARIKVPVLMSVGLMDPVCPPSTQFA 280 (321)
T ss_pred hHHHhhccceEEeecccCCCCCChhhHH
Confidence 3456899999999999999999976544
No 147
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=21.08 E-value=97 Score=23.64 Aligned_cols=15 Identities=20% Similarity=0.217 Sum_probs=11.4
Q ss_pred CCEEEEecCchHHHH
Q 044687 12 KPTVLIGIGDDWRIK 26 (111)
Q Consensus 12 ~p~~lvg~s~~~~v~ 26 (111)
.|++|||||++..+.
T Consensus 146 ~~iilVGHSmGGaIa 160 (343)
T KOG2564|consen 146 PQIILVGHSMGGAIA 160 (343)
T ss_pred CceEEEeccccchhh
Confidence 679999999954433
Done!