Citrus Sinensis ID: 044688

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Secondary Structure (PSIPRED)
cccccccccccccccccHHHHHHcccccccEEEEccccccHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHcccccEEEEEcccccccccccccccHHHHHHHHcHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHccccccccEEEEEccccccHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEEcHccHHHHHHHHHHHHHccccccEEEEccccccccccccccccEEEEEEccccHHHHccc
Coil and Loop (DISEMBL)
mrlfnrkgpsgfsasspaeevtqgidatgLTAIVTGassgigaeTTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASdfttkglplnilinnagimaspfmlskdnIELQFATNHLGSLHLHML
Flexible Loop (DISEMBL)
mrlfnrkgpsgfsasspaEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRnmaagtdvKDAIVKEIPTAKVDVLELDLSSLASVRKFAsdfttkglplNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Low Complexity Region (SEG)
MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Disordered region (IsUnstruct)
************************IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSL*****
Disordered Region (DISOPRED)
*************ASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Disordered Region (DISEMBL)
*********************TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Disordered Region (DISPRO)
********************VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q6RVV4	316	Short-chain dehydrogenase	N/A	no	0.918	0.427	0.792	9e-57
A2RVM0	322	Short-chain dehydrogenase	no	no	1.0	0.456	0.721	4e-56
Q5F389	414	WW domain-containing oxid	yes	no	0.904	0.321	0.451	4e-28
Q9NZC7	414	WW domain-containing oxid	yes	no	0.904	0.321	0.451	2e-27
Q5R9W5	414	WW domain-containing oxid	yes	no	0.904	0.321	0.451	3e-27
Q91WL8	414	WW domain-containing oxid	yes	no	0.904	0.321	0.436	4e-26
Q803A8	412	WW domain-containing oxid	yes	no	0.897	0.320	0.424	2e-24
Q8BYK4	316	Retinol dehydrogenase 12	no	no	0.816	0.379	0.4	6e-20
P59837	316	Retinol dehydrogenase 12	no	no	0.761	0.354	0.419	5e-19
O74959	339	Uncharacterized oxidoredu	yes	no	0.775	0.336	0.456	6e-19

>sp|Q6RVV4|TIC32_PEA Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum GN=TIC32 PE=1 SV=1

 Score =  218 bits (555), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 107/135 (79%), Positives = 117/135 (86%)

Query: 6   RKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA 65
           +KG SGFS SS AE+VT GIDATGLTAIVTGASSGIGAETTRVLALRG HV M VRNM A
Sbjct: 7   KKGVSGFSGSSTAEQVTHGIDATGLTAIVTGASSGIGAETTRVLALRGAHVIMGVRNMVA 66

Query: 66  GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
             DVKD I+K+IP+AKVD +ELDLSSL SV+KFAS+F + G PLNILINNAGIMA PF L
Sbjct: 67  AKDVKDTILKDIPSAKVDAIELDLSSLDSVKKFASEFNSSGRPLNILINNAGIMACPFKL 126

Query: 126 SKDNIELQFATNHLG 140
           SKDNIELQFATNH+G
Sbjct: 127 SKDNIELQFATNHIG 141

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids.
Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|A2RVM0|TIC32_ARATH Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana GN=TIC32 PE=2 SV=1

 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/147 (72%), Positives = 120/147 (81%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M  F  KG SGFS+ S AEEVT G+D TGLTAIVTGASSGIG ET RVL+LRGVHV MAV
Sbjct: 1   MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN  +G  VK+ IVK++P AK+DV+ELDLSS+ SVRKFAS++ + GLPLN+LINNAGIMA
Sbjct: 61  RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHLHML 147
            PFMLSKDNIELQFATNHLG   L  L
Sbjct: 121 CPFMLSKDNIELQFATNHLGHFLLTKL 147

Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5F389|WWOX_CHICK WW domain-containing oxidoreductase OS=Gallus gallus GN=WWOX PE=2 SV=2

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 85/133 (63%)

Query: 12  FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
           +  +S A E+ QG D +G   I+TGA+SGIG ET +  AL G +V +A RNM+ G D   
Sbjct: 107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query: 72  AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+ + LDL+SL SV+ FA  F +K +PL+IL+ NA I  S + L++D +E
Sbjct: 167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query: 132 LQFATNHLGSLHL 144
             F  NHLG  +L
Sbjct: 227 STFQVNHLGHFYL 239

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Gallus gallus (taxid: 9031)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9NZC7|WWOX_HUMAN WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 83/133 (62%)

Query: 12  FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
           +  S+ A E+ QG D TG   +VTGA+SGIG ET +  AL G HV +A RNMA  ++   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+ + LDL+ L SV+ FA  F  K +PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHLGSLHL 144
             F  NHLG  +L
Sbjct: 227 TTFQVNHLGHFYL 239

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. Required for normal bone development (By similarity). May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q5R9W5|WWOX_PONAB WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 60/133 (45%), Positives = 83/133 (62%)

Query: 12  FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
           +  S+ A E+ QG D TG   +VTGA+SGIG ET +  AL G HV +A RNMA  ++   
Sbjct: 107 YDGSTTALEILQGRDFTGKVVVVTGANSGIGFETAKSFALHGAHVILACRNMARASEAVS 166

Query: 72  AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+ + LDL+ L SV+ FA  F  K +PL++L+ NA   A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVCNAATFALPWSLTKDGLE 226

Query: 132 LQFATNHLGSLHL 144
             F  NHLG  +L
Sbjct: 227 TTFQVNHLGHFYL 239

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q91WL8|WWOX_MOUSE WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/133 (43%), Positives = 83/133 (62%)

Query: 12  FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
           +  S+ A E+ QG D TG   +VTGA+SGIG ET +  AL G HV +A RN++  ++   
Sbjct: 107 YDGSTTAMEILQGRDFTGKVVLVTGANSGIGFETAKSFALHGAHVILACRNLSRASEAVS 166

Query: 72  AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
            I++E   AKV+ + LDL+ L SV+ FA  F  K + L++L+ NAG  A P+ L+KD +E
Sbjct: 167 RILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVCNAGTFALPWGLTKDGLE 226

Query: 132 LQFATNHLGSLHL 144
             F  NHLG  +L
Sbjct: 227 TTFQVNHLGHFYL 239

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. Inhibits Wnt signaling, probably by sequestering DVL2 in the cytoplasm (By similarity). May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q803A8|WWOX_DANRE WW domain-containing oxidoreductase OS=Danio rerio GN=wwox PE=2 SV=1

 Score =  110 bits (276), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 56/132 (42%), Positives = 78/132 (59%)

Query: 9   PSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD 68
           P  +  ++ A E+  G D +    IVTGA+SGIG ET R  AL G HV +A RN +  + 
Sbjct: 101 PKRYDGNTGALEILHGQDLSDKVIIVTGANSGIGFETARSFALHGAHVILACRNQSRASK 160

Query: 69  VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKD 128
               I+ E   A+V+VL LDL+SL SVR+FA  F    LPL++L+ NA + + P+ L++D
Sbjct: 161 AASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHVLVCNAAVCSQPWRLTED 220

Query: 129 NIELQFATNHLG 140
             E  F   HLG
Sbjct: 221 GFESTFQICHLG 232

Putative oxidoreductase. Acts as a tumor suppressor and plays a role in apoptosis. May function synergistically with p53/TP53 to control genotoxic stress-induced cell death. Plays a role in TGFB1 signaling and TGFB1-mediated cell death. May also play a role in tumor necrosis factor (TNF)-mediated cell death. Required for normal bone development. Inhibits Wnt signaling.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q8BYK4|RDH12_MOUSE Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1

 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 67/120 (55%)

Query: 21  VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA 80
            T  +   G   ++TGA++GIG ET R LA RG  V++A R++  G      I  +   +
Sbjct: 31  CTTNVQIPGKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIRADTKNS 90

Query: 81  KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           +V V +LDLS   S+R FA  F  +   L+ILINNAG+M  P+  + D  E  F  NHLG
Sbjct: 91  QVLVRKLDLSDTKSIRAFAERFLAEEKKLHILINNAGVMMCPYSKTTDGFETHFGVNHLG 150

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P59837|RDH12_BOVIN Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 65/112 (58%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G   ++TGA++GIG ET R LA RG  V++A R++  G      I  +   ++V V +LD
Sbjct: 39  GKVVVITGANTGIGKETARELARRGARVYIACRDVLKGESAASEIQADTKNSQVLVRKLD 98

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           LS   S+R FA  F  +   L+ILINNAG+M  P+  + D  E   A NHLG
Sbjct: 99  LSDTKSIRAFAEGFLAEEKQLHILINNAGVMLCPYSKTADGFETHLAVNHLG 150

Exhibits an oxidoreductive catalytic activity towards retinoids. Most efficient as an NADPH-dependent retinal reductase. Displays high activity toward 9-cis and all-trans-retinol. Also involved in the metabolism of short-chain aldehydes. No steroid dehydrogenase activity detected. Might be the key enzyme in the formation of 11-cis-retinal from 11-cis-retinol during regeneration of the cone visual pigments.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O74959|YJCD_SCHPO Uncharacterized oxidoreductase C736.13 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC736.13 PE=3 SV=1

 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 52/114 (45%), Positives = 65/114 (57%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D TG  A+VTG+S GIG  T   LA +G  V++A RN      V   I  E+  +K+  L
Sbjct: 39  DLTGKVALVTGSSGGIGYVTALELARKGAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFL 98

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHL 139
            LDL    SV + A  F  K   L+IL+NNAGIM  PF L+KD  ELQ  TN+L
Sbjct: 99  RLDLLDFESVYQAAESFIAKEEKLHILVNNAGIMNPPFELTKDGYELQIQTNYL 152

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
225464515	313	PREDICTED: short-chain dehydrogenase TIC	0.979	0.460	0.819	2e-62
147792550	231	hypothetical protein VITISV_040853 [Viti	0.952	0.606	0.821	1e-60
225464511	306	PREDICTED: short-chain dehydrogenase TIC	0.993	0.477	0.795	6e-59
388493540	315	unknown [Lotus japonicus]	0.979	0.457	0.756	9e-59
359490488	313	PREDICTED: short-chain dehydrogenase TIC	0.952	0.447	0.8	2e-58
359490491	313	PREDICTED: short-chain dehydrogenase TIC	0.993	0.466	0.795	3e-58
449456311	319	PREDICTED: short-chain dehydrogenase TIC	0.952	0.438	0.778	2e-57
449528313	319	PREDICTED: short-chain dehydrogenase TIC	0.952	0.438	0.778	2e-57
449524040	252	PREDICTED: short-chain dehydrogenase TIC	0.979	0.571	0.756	4e-57
225426446	315	PREDICTED: short-chain dehydrogenase TIC	0.952	0.444	0.771	7e-57

>gi|225464515|ref|XP_002270104.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis vinifera] gi|302143828|emb|CBI22689.3| unnamed protein product [Vitis vinifera]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 118/144 (81%), Positives = 129/144 (89%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M  F+RKGPSGFSASS AEEVTQGID TGLTAIVTGASSGIG ETTRVLALRGVHV M V
Sbjct: 1   MWWFSRKGPSGFSASSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RNM+AG +VK+AIVKEIPTAKVD +ELDLSS+ASVRKFAS++ + GLPLNILINNAGIMA
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHL 144
            P+MLSKDNIE+QFATNHLG   L
Sbjct: 121 VPYMLSKDNIEMQFATNHLGHFLL 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147792550|emb|CAN65621.1| hypothetical protein VITISV_040853 [Vitis vinifera]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 115/140 (82%), Positives = 127/140 (90%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M  F+RKG SGFS+SS AEEVTQGID TGLTAIVTGASSGIG ETTRVLALRGVHV M V
Sbjct: 1   MWPFSRKGASGFSSSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RNM+AG +VK+AIVKEIPTAKVD +ELDLSS+ASVRKFAS++ + GLPLNILINNAGIMA
Sbjct: 61  RNMSAGKEVKEAIVKEIPTAKVDAMELDLSSMASVRKFASEYNSSGLPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLG 140
            P+MLSKDNIE+QFATNHLG
Sbjct: 121 VPYMLSKDNIEMQFATNHLG 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464511|ref|XP_002270039.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform 1 [Vitis vinifera]

 Score =  231 bits (590), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 117/147 (79%), Positives = 128/147 (87%), Gaps = 1/147 (0%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M LF+RKG SGFS SS AEEVTQGID TGLTAIVTGASSGIG ETTRVLALRGVHV M V
Sbjct: 1   MWLFSRKGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RNMAAG +VK+AIVKEIPTAKVDV+ELDLSS+ASVRKFAS+F + GLPLNILINNAG   
Sbjct: 61  RNMAAGQEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNILINNAGTTG 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHLHML 147
            P+MLSKDNIE+ FATNHLG+L L  +
Sbjct: 121 -PYMLSKDNIEMLFATNHLGTLLLDTM 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388493540|gb|AFK34836.1| unknown [Lotus japonicus]

 Score =  231 bits (588), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 128/144 (88%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M +F  KGPSGFSASS A++VTQGID TGLTAI+TGASSG+G ETTR+LALRGVHV MAV
Sbjct: 1   MWIFGWKGPSGFSASSTADQVTQGIDGTGLTAIITGASSGLGLETTRILALRGVHVVMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN++ G DVK+ ++KEIP AK+DV+ELDLSS+ASVRKFA+DF + GLPLNILINNAG+MA
Sbjct: 61  RNVSTGMDVKETMLKEIPAAKIDVMELDLSSMASVRKFAADFNSSGLPLNILINNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHL 144
           +PFMLS+DNIELQFATNHLG   L
Sbjct: 121 TPFMLSQDNIELQFATNHLGHFLL 144

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490488|ref|XP_002272242.2| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|147792549|emb|CAN65620.1| hypothetical protein VITISV_040852 [Vitis vinifera] gi|302143827|emb|CBI22688.3| unnamed protein product [Vitis vinifera]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/140 (80%), Positives = 124/140 (88%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M  F R G SGFSASS A EVT GID TGLTAIVTGASSGIG ET RVLALRGVHV MAV
Sbjct: 1   MWWFGRNGASGFSASSTAVEVTHGIDGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RNMAAG +VK+AI KEIPTAK+D +ELDLSS+ASVRKFAS+F++ GLPLN+LINNAG+MA
Sbjct: 61  RNMAAGREVKEAIAKEIPTAKIDAMELDLSSMASVRKFASEFSSSGLPLNLLINNAGLMA 120

Query: 121 SPFMLSKDNIELQFATNHLG 140
           +PFMLSKDNIELQFATNH+G
Sbjct: 121 TPFMLSKDNIELQFATNHIG 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490491|ref|XP_003634099.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Vitis vinifera] gi|302143829|emb|CBI22690.3| unnamed protein product [Vitis vinifera]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/147 (79%), Positives = 126/147 (85%), Gaps = 1/147 (0%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M LF+RKG SGFS SS AEEVTQGID TGLTAIVTGASSGIG ETTRVLALRGVHV M V
Sbjct: 1   MWLFSRKGASGFSGSSTAEEVTQGIDGTGLTAIVTGASSGIGTETTRVLALRGVHVVMGV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RNMAAG +VK+AIVKEIPTAKVDV+ELDLSS+ASVRKFAS+F + GLPLNILINNAG   
Sbjct: 61  RNMAAGQEVKEAIVKEIPTAKVDVMELDLSSMASVRKFASEFNSSGLPLNILINNAGTTG 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHLHML 147
            P+MLSKDNIE+ FATNHLG   L  L
Sbjct: 121 -PYMLSKDNIEMLFATNHLGHFLLTSL 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449456311|ref|XP_004145893.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  226 bits (577), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/140 (77%), Positives = 124/140 (88%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M   +RKGPSGFSASS AEEVTQGI+ TGLTAIVTGASSGIG ET RVLALRGVHV MAV
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN+A G +V++AI+KE PTAKVD +ELDLSS+ASVR FAS+F + GLPLNIL+NNAG+MA
Sbjct: 61  RNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASNFKSSGLPLNILVNNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLG 140
           SPF+LSKD IELQFATNH+G
Sbjct: 121 SPFLLSKDKIELQFATNHVG 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528313|ref|XP_004171149.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  226 bits (576), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 109/140 (77%), Positives = 124/140 (88%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M   +RKGPSGFSASS AEEVTQGI+ TGLTAIVTGASSGIG ET RVLALRGVHV MAV
Sbjct: 1   MWFVSRKGPSGFSASSTAEEVTQGINGTGLTAIVTGASSGIGTETARVLALRGVHVVMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN+A G +V++AI+KE PTAKVD +ELDLSS+ASVR FAS+F + GLPLNIL+NNAG+MA
Sbjct: 61  RNVATGREVQEAIIKENPTAKVDTMELDLSSMASVRNFASNFKSSGLPLNILVNNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLG 140
           SPF+LSKD IELQFATNH+G
Sbjct: 121 SPFLLSKDKIELQFATNHVG 140

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449524040|ref|XP_004169031.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Cucumis sativus]

 Score =  225 bits (574), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 124/144 (86%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M LF RKGPSGFS+SS AEEVT GID TGLTAIVTGASSGIG+ET RVLALRGVHV M V
Sbjct: 1   MWLFRRKGPSGFSSSSTAEEVTDGIDGTGLTAIVTGASSGIGSETARVLALRGVHVIMGV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN+ AG +V++ IVKE P+AK+D +ELDLSS+ASVRKFASD+ + G PLNILINNAGIMA
Sbjct: 61  RNLEAGRNVRETIVKENPSAKIDAMELDLSSMASVRKFASDYQSSGFPLNILINNAGIMA 120

Query: 121 SPFMLSKDNIELQFATNHLGSLHL 144
           +PF LSKDNIE+QFATNH+G   L
Sbjct: 121 TPFGLSKDNIEVQFATNHIGHFLL 144

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426446|ref|XP_002274932.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic isoform 1 [Vitis vinifera] gi|297742509|emb|CBI34658.3| unnamed protein product [Vitis vinifera]

 Score =  224 bits (572), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 108/140 (77%), Positives = 123/140 (87%)

Query: 1   MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
           M +F RKGPSGFSA S AEEV QGID  GLTA+VTGASSGIG ET+RVLAL GVHV MAV
Sbjct: 1   MWIFGRKGPSGFSACSTAEEVAQGIDGNGLTAVVTGASSGIGTETSRVLALHGVHVIMAV 60

Query: 61  RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           RN+ AG +VK+ I+KEIPTAKVDV+ELDLSSL SVRKFAS++ + GLPLN+LINNAG+MA
Sbjct: 61  RNVDAGRNVKETILKEIPTAKVDVMELDLSSLPSVRKFASEYKSLGLPLNLLINNAGVMA 120

Query: 121 SPFMLSKDNIELQFATNHLG 140
           +PF+LS DNIELQFATNHLG
Sbjct: 121 TPFLLSHDNIELQFATNHLG 140

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2117969	322	Tic32-IVa "translocon at the i	1.0	0.456	0.721	5.8e-50
TAIR|locus:2123066	317	AT4G11410 [Arabidopsis thalian	0.911	0.422	0.768	6.7e-49
TAIR|locus:2181778	331	AT5G02540 [Arabidopsis thalian	0.918	0.407	0.577	7e-38
TAIR|locus:2040676	321	AT2G37540 [Arabidopsis thalian	0.918	0.420	0.562	2.7e-36
TAIR|locus:2134971	332	AT4G24050 [Arabidopsis thalian	0.938	0.415	0.521	3.2e-33
TAIR|locus:2019474	334	AT1G64590 [Arabidopsis thalian	0.986	0.434	0.510	1.6e-31
TAIR|locus:2170071	339	AT5G50130 [Arabidopsis thalian	0.904	0.392	0.548	2e-31
UNIPROTKB|E1C8R5	390	WWOX "WW domain-containing oxi	0.925	0.348	0.448	4e-26
UNIPROTKB|F1NXW7	414	WWOX "WW domain-containing oxi	0.925	0.328	0.448	4e-26
UNIPROTKB|Q5F389	414	WWOX "WW domain-containing oxi	0.925	0.328	0.448	4e-26

TAIR|locus:2117969 Tic32-IVa "translocon at the inner envelope membrane of chloroplasts 32-IVa" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
 Identities = 106/147 (72%), Positives = 120/147 (81%)

Query:     1 MRLFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV 60
             M  F  KG SGFS+ S AEEVT G+D TGLTAIVTGASSGIG ET RVL+LRGVHV MAV
Sbjct:     1 MWFFGSKGASGFSSRSTAEEVTHGVDGTGLTAIVTGASSGIGVETARVLSLRGVHVVMAV 60

Query:    61 RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
             RN  +G  VK+ IVK++P AK+DV+ELDLSS+ SVRKFAS++ + GLPLN+LINNAGIMA
Sbjct:    61 RNTDSGAKVKEDIVKQVPGAKLDVMELDLSSMQSVRKFASEYKSTGLPLNLLINNAGIMA 120

Query:   121 SPFMLSKDNIELQFATNHLGSLHLHML 147
              PFMLSKDNIELQFATNHLG   L  L
Sbjct:   121 CPFMLSKDNIELQFATNHLGHFLLTKL 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009706 "chloroplast inner membrane" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2123066 AT4G11410 [Arabidopsis thaliana (taxid:3702)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 103/134 (76%), Positives = 115/134 (85%)

Query:     7 KGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG 66
             KG SGFSA S AEEVT GID TGLTAIVTGASSGIG ETTRVLALRGVHV MAVRN  +G
Sbjct:     7 KGASGFSARSTAEEVTHGIDGTGLTAIVTGASSGIGEETTRVLALRGVHVVMAVRNTDSG 66

Query:    67 TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLS 126
               V+D I+KEIP AK+DV++LDLSS+ASVR FAS++ +  LPLN+LINNAGIMA PF+LS
Sbjct:    67 NQVRDKILKEIPQAKIDVMKLDLSSMASVRSFASEYQSLDLPLNLLINNAGIMACPFLLS 126

Query:   127 KDNIELQFATNHLG 140
              DNIELQFATNHLG
Sbjct:   127 SDNIELQFATNHLG 140

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2181778 AT5G02540 [Arabidopsis thaliana (taxid:3702)]

 Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
 Identities = 78/135 (57%), Positives = 101/135 (74%)

Query:     6 RKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA 65
             R+GPSGF ++S AEEVTQGIDAT LTAI+TG + GIG ET RVL+ RG HV +  RNM A
Sbjct:    10 RRGPSGFGSASTAEEVTQGIDATNLTAIITGGTGGIGMETARVLSKRGAHVVIGARNMGA 69

Query:    66 GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
               + K  I+++   A+V +L+LDLSS+ S++ F  +F    LPLN+LINNAG+M  P+ L
Sbjct:    70 AENAKTEILRQNANARVTLLQLDLSSIKSIKAFVREFHALHLPLNLLINNAGVMFCPYQL 129

Query:   126 SKDNIELQFATNHLG 140
             S+D IELQFATNH+G
Sbjct:   130 SEDGIELQFATNHIG 144

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2040676 AT2G37540 [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 76/135 (56%), Positives = 99/135 (73%)

Query:     6 RKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA 65
             +KG SGF ++S AE+VTQ IDA+ LTAI+TG +SGIG E  RVLA+RG HV +A RN  A
Sbjct:    10 KKGKSGFGSASTAEDVTQAIDASHLTAIITGGTSGIGLEAARVLAMRGAHVIIAARNPKA 69

Query:    66 GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
               + K+ I++  P A+VD L++D+SS+ SVR F   F    +PLNILINNAG+M  PF L
Sbjct:    70 ANESKEMILQMNPNARVDYLQIDVSSIKSVRSFVDQFLALNVPLNILINNAGVMFCPFKL 129

Query:   126 SKDNIELQFATNHLG 140
             ++D IE QFATNH+G
Sbjct:   130 TEDGIESQFATNHIG 144

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009860 "pollen tube growth" evidence=IEP

TAIR|locus:2134971 AT4G24050 [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 72/138 (52%), Positives = 95/138 (68%)

Query:     3 LFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN 62
             L    G SGF + S AEEVT+  D   +TA++TGA+SGIGAET RVLA RG  +    RN
Sbjct:     8 LLGAAGASGFGSKSTAEEVTENCDLRSITAVITGATSGIGAETARVLAKRGARLIFPARN 67

Query:    63 MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASP 122
             + A  + K+ IV E P  ++ V++LDLSS+ASVR F +DF +  LPLN+LINNAG +A  
Sbjct:    68 VKAAEEAKERIVSEFPETEIVVMKLDLSSIASVRNFVADFESLDLPLNLLINNAGKLAHE 127

Query:   123 FMLSKDNIELQFATNHLG 140
               +S+D IE+ FATN+LG
Sbjct:   128 HAISEDGIEMTFATNYLG 145

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2019474 AT1G64590 [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 74/145 (51%), Positives = 93/145 (64%)

Query:     3 LFNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN 62
             L    GPSGF + S A+ VT   D   LTAI+TGA+SGIGAET RVLA RG  + +  R+
Sbjct:     8 LIGSGGPSGFGSRSTADHVTCNSDLRSLTAIITGATSGIGAETARVLAKRGARLVLPARS 67

Query:    63 MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASP 122
             +    + K  I+ E P A++ V+ LDLSSL SVR+F  DF +  LPLNILINNAG  A  
Sbjct:    68 VKTAEETKARILSEFPDAEIIVMHLDLSSLTSVRRFVDDFESLNLPLNILINNAGKYAHK 127

Query:   123 FMLSKDNIELQFATNHLGSLHLHML 147
               LS+D +E+ FATN+LG   L  L
Sbjct:   128 HALSEDGVEMTFATNYLGHFLLTKL 152

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2170071 AT5G50130 [Arabidopsis thaliana (taxid:3702)]

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 74/135 (54%), Positives = 95/135 (70%)

Query:     8 GPSGFSASSPAEEVTQG--IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA 65
             GP+GF + S AE+VTQ      + LTAI+TG +SGIGAET RVLA RGV V MAVR+M  
Sbjct:    13 GPNGFGSRSTAEQVTQHSFFPCSHLTAIITGGTSGIGAETARVLAKRGVRVVMAVRDMKK 72

Query:    66 GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
                VK+ I++E P A + + E+DLSSL+SV +F S F ++ LPLNILINNAG+ +     
Sbjct:    73 AEMVKERIIRENPEADIILFEIDLSSLSSVARFCSQFLSQDLPLNILINNAGVFSPNLEF 132

Query:   126 SKDNIELQFATNHLG 140
             S++ IEL FATN LG
Sbjct:   133 SEEKIELTFATNFLG 147

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

UNIPROTKB|E1C8R5 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/136 (44%), Positives = 86/136 (63%)

Query:    12 FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
             +  +S A E+ QG D +G   I+TGA+SGIG ET +  AL G +V +A RNM+ G D   
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    72 AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
              I++E   AKV+ + LDL+SL SV+ FA  F +K +PL+IL+ NA I  S + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   132 LQFATNHLGSLHLHML 147
               F  NHLG  +L  L
Sbjct:   227 STFQVNHLGHFYLVQL 242

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|F1NXW7 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/136 (44%), Positives = 86/136 (63%)

Query:    12 FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
             +  +S A E+ QG D +G   I+TGA+SGIG ET +  AL G +V +A RNM+ G D   
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    72 AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
              I++E   AKV+ + LDL+SL SV+ FA  F +K +PL+IL+ NA I  S + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   132 LQFATNHLGSLHLHML 147
               F  NHLG  +L  L
Sbjct:   227 STFQVNHLGHFYLVQL 242

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0001649 "osteoblast differentiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005902 "microvillus" evidence=IEA

GO:0006917 "induction of apoptosis" evidence=IEA

GO:0019899 "enzyme binding" evidence=IEA

GO:0030178 "negative regulation of Wnt receptor signaling pathway" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0048705 "skeletal system morphogenesis" evidence=IEA

GO:0071560 "cellular response to transforming growth factor beta stimulus" evidence=IEA

UNIPROTKB|Q5F389 WWOX "WW domain-containing oxidoreductase" [Gallus gallus (taxid:9031)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/136 (44%), Positives = 86/136 (63%)

Query:    12 FSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
             +  +S A E+ QG D +G   I+TGA+SGIG ET +  AL G +V +A RNM+ G D   
Sbjct:   107 YDGNSTAMEILQGRDLSGKVIIITGANSGIGFETAKSFALHGAYVILACRNMSRGNDAVQ 166

Query:    72 AIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
              I++E   AKV+ + LDL+SL SV+ FA  F +K +PL+IL+ NA I  S + L++D +E
Sbjct:   167 RILEEWHKAKVEAMTLDLASLRSVQNFAEAFKSKNMPLHILVCNAAIFGSSWCLTEDGLE 226

Query:   132 LQFATNHLGSLHLHML 147
               F  NHLG  +L  L
Sbjct:   227 STFQVNHLGHFYLVQL 242

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006915 "apoptotic process" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00037682001 SubName- Full=Chromosome undetermined scaffold_91, whole genome shotgun sequence; (313 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	3e-50
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	3e-42
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-42
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	6e-34
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	5e-33
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	1e-31
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	9e-24
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	3e-23
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-19
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-19
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	3e-19
cd05233	234	cd05233, SDR_c, classical (c) SDRs	1e-18
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-18
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	7e-18
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-18
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-17
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-15
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	3e-15
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	1e-14
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	2e-14
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	5e-14
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	8e-14
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	6e-13
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-12
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-12
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	6e-12
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-12
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	1e-11
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	2e-11
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-11
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	3e-11
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	4e-11
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-11
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	8e-11
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	2e-10
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	3e-10
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	3e-10
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	4e-10
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	5e-10
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	5e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	6e-10
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	7e-10
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-09
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-09
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	2e-09
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-09
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-09
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-09
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-09
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	3e-09
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	3e-09
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	4e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	4e-09
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-09
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	6e-09
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	6e-09
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	6e-09
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	7e-09
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	8e-09
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-09
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-09
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-08
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-08
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-08
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	2e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-08
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	2e-08
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-08
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-08
PRK08017	256	PRK08017, PRK08017, oxidoreductase; Provisional	3e-08
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	3e-08
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	4e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	5e-08
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	6e-08
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-08
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	7e-08
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	8e-08
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	1e-07
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-07
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-07
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	1e-07
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	3e-07
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	3e-07
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-07
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	5e-07
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	5e-07
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-07
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	7e-07
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	7e-07
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	7e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	8e-07
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	8e-07
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	9e-07
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	9e-07
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-06
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	1e-06
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-06
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	1e-06
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-06
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-06
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-06
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-06
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-06
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-06
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-06
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	2e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	3e-06
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	3e-06
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	3e-06
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-06
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	4e-06
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	4e-06
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-06
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-06
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-06
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	6e-06
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	7e-06
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	8e-06
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	9e-06
pfam08659	181	pfam08659, KR, KR domain	9e-06
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	1e-05
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-05
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	1e-05
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	2e-05
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-05
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	2e-05
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	2e-05
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-05
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	2e-05
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-05
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	3e-05
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	3e-05
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	3e-05
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-05
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	4e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	5e-05
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	6e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	7e-05
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	7e-05
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	8e-05
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-04
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-04
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	1e-04
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	1e-04
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	1e-04
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-04
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	1e-04
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-04
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-04
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-04
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-04
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	2e-04
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	2e-04
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-04
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-04
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	3e-04
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-04
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-04
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	3e-04
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	3e-04
PRK07023	243	PRK07023, PRK07023, short chain dehydrogenase; Pro	3e-04
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	3e-04
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	4e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-04
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-04
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-04
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-04
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	5e-04
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	7e-04
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	7e-04
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	0.001
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	0.001
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	0.001
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	0.002
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	0.002
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	0.002
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.003
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	0.003
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	0.003
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	0.003
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	0.004
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	0.004

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score =  161 bits (409), Expect = 3e-50
 Identities = 65/116 (56%), Positives = 79/116 (68%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G   ++TGA+SGIG ET R LA RG HV +A RN   G +    I KE   AKV+V++LD
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           LSSLASVR+FA +F  +   L+ILINNAGIMA P  L+KD  ELQFA N+LG   L
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKDGFELQFAVNYLGHFLL 116

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score =  141 bits (358), Expect = 3e-42
 Identities = 65/131 (49%), Positives = 76/131 (58%), Gaps = 6/131 (4%)

Query: 10  SGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV 69
           SGF A+S AEEV  G D +G TAIVTG  SG+G ETTR LA  G HV +  R      + 
Sbjct: 7   SGFGAASTAEEVLAGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREA 66

Query: 70  KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDN 129
              I        V+V+ LDL+ L SVR FA  F   G  ++ILINNAG+MA P     D 
Sbjct: 67  LAGI------DGVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGDG 120

Query: 130 IELQFATNHLG 140
            E QFATNHLG
Sbjct: 121 WEAQFATNHLG 131

Length = 315

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score =  140 bits (356), Expect = 5e-42
 Identities = 54/115 (46%), Positives = 70/115 (60%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D +G  A+VTGA++G+G ET   LA +G HV +AVRN+  G      I    P A V + 
Sbjct: 13  DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQ 72

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           ELDL+SLASVR  A         +++LINNAG+M +P   + D  ELQF TNHLG
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLG 127

Length = 306

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score =  119 bits (300), Expect = 6e-34
 Identities = 53/119 (44%), Positives = 75/119 (63%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G   I+TGA+SGIG ET R  AL G HV +A RNM+  +     I++E   A+V+ + LD
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML 147
           L+SL SV++FA  F  K  PL++L+ NA + A P+ L++D +E  F  NHLG  +L  L
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWTLTEDGLETTFQVNHLGHFYLVQL 119

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score =  117 bits (294), Expect = 5e-33
 Identities = 52/112 (46%), Positives = 72/112 (64%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G T I+TGA++GIG ET R LA RG  V MA R+MA   +    I ++    +V V  LD
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           L+SL S+R FA++F  +   L++LINNAG+M  P+  ++D  E+QF  NHLG
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNAGVMRCPYSKTEDGFEMQFGVNHLG 112

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score =  114 bits (287), Expect = 1e-31
 Identities = 57/125 (45%), Positives = 71/125 (56%), Gaps = 3/125 (2%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D +G  A+VTGAS G+G    R LA  G  V + VRN A G     AI   +P AK+ + 
Sbjct: 11  DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLR 70

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASP-FMLSKDNIELQFATNHLGSLHL 144
            LDLSSLASV         +G P+++LINNAG+M  P    + D  ELQF TNHLG   L
Sbjct: 71  ALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFAL 130

Query: 145 --HML 147
             H+L
Sbjct: 131 TAHLL 135

Length = 313

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 93.5 bits (233), Expect = 9e-24
 Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 7/114 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T I+TGASSG+G    + LA RG HV MA RN+         +   IP     ++ +DL 
Sbjct: 8   TVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQEL--GIPPDSYTIIHIDLG 65

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI----MASPFMLSKDNIELQFATNHLG 140
            L SVR+F  DF   G PL+ L+ NA +    +  P + S    EL  ATNHLG
Sbjct: 66  DLDSVRRFVDDFRALGKPLDALVCNAAVYMPLLKEP-LRSPQGYELSMATNHLG 118

Length = 322

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 92.2 bits (229), Expect = 3e-23
 Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           T ++TGASSG+G    + LA RG  HV MA R+          +   +P     VL  DL
Sbjct: 3   TVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVG--MPKDSYSVLHCDL 60

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLG 140
           +SL SVR+F  +F   G PL+ L+ NA +    A     + D  EL    NHLG
Sbjct: 61  ASLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPRFTADGFELTVGVNHLG 114

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 82.6 bits (204), Expect = 1e-19
 Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           T I+TGASSG+G    + LA  G  HV MA R+         ++   +P     ++ LDL
Sbjct: 5   TVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSL--GMPKDSYTIMHLDL 62

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLG 140
            SL SVR+F   F   G PL+ L+ NA +    A     + D  EL   TNHLG
Sbjct: 63  GSLDSVRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLG 116

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 80.7 bits (199), Expect = 2e-19
 Identities = 40/112 (35%), Positives = 60/112 (53%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G + ++TGA+SGIG      +A RG  V M  RN     + +  I  E     + +  +D
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNIFLHIVD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           +S    V +F  +F  +G  L++LINNAG M +   L++D +E  FATN LG
Sbjct: 61  MSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTEDGLEKNFATNTLG 112

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 81.3 bits (201), Expect = 3e-19
 Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 6/112 (5%)

Query: 33  IVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           I+TGASSG+G  T + LA  G  HV MA R+       + A    +P     V+ LDL+S
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAE--RAAKSAGMPKDSYTVMHLDLAS 58

Query: 92  LASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLG 140
           L SVR+F  +F   G PL++L+ NA +    A     + D  EL   TNHLG
Sbjct: 59  LDSVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLG 110

Length = 308

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 78.5 bits (194), Expect = 1e-18
 Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           A+VTGASSGIG    R LA  G  V +A RN  A  ++               ++ D+S 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALG---GNAVAVQADVSD 57

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHL 144
              V     +   +   L+IL+NNAGI     +  L+ ++ +     N  G   L
Sbjct: 58  EEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLL 112

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 77.7 bits (192), Expect = 4e-18
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 3/116 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TA++TGASSGIGAE  + LA RG ++ +  R       +   +  +    +V+V+  DLS
Sbjct: 8   TALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLS 66

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLHL 144
              ++ +   +   +G P+++L+NNAG     PF+ LS D  E     N L    L
Sbjct: 67  DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRL 122

Length = 265

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 76.1 bits (188), Expect = 7e-18
 Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
            A+VTGA+ GIG E  R LA  G   V +  R++  G    + +  E     V   +LD+
Sbjct: 2   VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAE--GLSVRFHQLDV 59

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLG 140
           +  AS+   A     K   L+IL+NNAGI          +++       TN  G
Sbjct: 60  TDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFG 113

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 76.5 bits (189), Expect = 9e-18
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TG SSGIG      LA +G  V    RN      ++           ++VLELD++
Sbjct: 2   VVLITGCSSGIGLALALALAAQGYRVIATARN---PDKLESLGELL--NDNLEVLELDVT 56

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMAS-PFM-LSKDNIELQFATNHLGSLHL 144
              S++    +   +   +++L+NNAG     P    S + +   F  N  G L +
Sbjct: 57  DEESIKAAVKEVIERFGRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRV 112

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 75.0 bits (185), Expect = 3e-17
 Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 6/120 (5%)

Query: 27  ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLE 86
             G  A++TGASSGIG  T R LA  G  V +A R      +  +A+  EI       L 
Sbjct: 4   LKGKVALITGASSGIGEATARALAEAGAKVVLAARR----EERLEALADEIGAGAALALA 59

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHL 144
           LD++  A+V         +   ++IL+NNAG+     +     D+ +    TN  G L+ 
Sbjct: 60  LDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNG 119

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 70.6 bits (173), Expect = 1e-15
 Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 5/119 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
            A+VTGASSGIG    R LA  G   V  A R+     +   A +KE    +   +  D+
Sbjct: 7   VALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADV 66

Query: 90  SS-LASVRKFASDFTTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHL 144
           S    SV    +    +   ++IL+NNAGI    A    L++++ +     N LG+  L
Sbjct: 67  SDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLL 125

Length = 251

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 69.2 bits (170), Expect = 3e-15
 Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 11/119 (9%)

Query: 32  AIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            ++TGAS GIG E  R L  RG   V    R+ +A T++          +++ +LELD++
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASH---SRLHILELDVT 57

Query: 91  SL--ASVRKFASDFTTKGLPLNILINNAGIMASPFMLS---KDNIELQFATNHLGSLHL 144
                S    A         L++LINNAGI+ S    S    +++   F  N LG L L
Sbjct: 58  DEIAESAEAVAERL--GDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLL 114

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 68.0 bits (167), Expect = 1e-14
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           I+TGASSGIG E    LA  G  + ++ R      +VK     E+      V+ LD+S L
Sbjct: 7   IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSEC-LELGAPSPHVVPLDMSDL 65

Query: 93  ASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLHL 144
               +   +       L+ILINNAGI M S F   S D        N+ G + L
Sbjct: 66  EDAEQVVEEALKLFGGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVAL 119

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 66.0 bits (162), Expect = 2e-14
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLEL 87
           T ++TG + G+G    R LA  G  H+ +  R   A       +V E+    A+V V   
Sbjct: 2   TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGA--AELVAELEALGAEVTVAAC 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHLH 145
           D++   ++    +       PL+ +++NAG+        L+ +  E   A    G+ +LH
Sbjct: 60  DVADRDALAALLAALPAALGPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 146 ML 147
            L
Sbjct: 120 EL 121

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 67.1 bits (165), Expect = 2e-14
 Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA+VTGAS GIG      LA  G  V +   N  A   +   +       +  VL  
Sbjct: 4   QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAG--GEARVLVF 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S  A+VR            L+IL+NNAGI
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGI 92

Length = 246

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 5e-14
 Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AIVTGASSG G  TT  LA +G  V   +RN     ++     +      + V +LD++
Sbjct: 5   IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVT 64

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLH 143
              S+  F      +   +++L+NNAG     F+  +  +    QF TN  G++ 
Sbjct: 65  DQNSIHNF-QLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAIS 118

Length = 280

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 66.3 bits (162), Expect = 8e-14
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)

Query: 32  AIVTGASSGIG-AETTRVLAL----RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DV 84
            +VTGA+SG+G A   R+LA       + + +A RN+        A++   P A+V  D 
Sbjct: 4   VLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVFDY 63

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASP 122
           + +DLS++ SV   A +   +   L+ L  NAGIM +P
Sbjct: 64  VLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNP 101

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 63.1 bits (154), Expect = 6e-13
 Identities = 38/122 (31%), Positives = 51/122 (41%), Gaps = 12/122 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TG T ++TG +SGIG    R     G  V +  R             KE+P     VL  
Sbjct: 4   TGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREE----RLAEAKKELPNIHTIVL-- 57

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSK-----DNIELQFATNHLGSL 142
           D+    SV   A    ++   L+ILINNAGI   P  L       D  + +  TN +G +
Sbjct: 58  DVGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPI 116

Query: 143 HL 144
            L
Sbjct: 117 RL 118

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLE 86
           G   ++TG SSGIG    + L   G +V +  R+ +   +  + I  E      KV  + 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLHL 144
            DLS    V +  +    KG P ++++N AGI +   F  L+ +  E     N+ GSL++
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T ++TGASSGIG  T R  A  G  + +  R      ++ D +  + P  KV  L+LD+S
Sbjct: 2   TVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPV-KVLPLQLDVS 60

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLGSLHL 144
              S+     +   +   ++IL+NNAG+   +        ++ E    TN  G L++
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNV 117

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 60.7 bits (148), Expect = 6e-12
 Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A++TGASSGIG  T    A  G  + +  R+  A   +   +       K     +DLS
Sbjct: 8   RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLS 65

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
           +  ++    ++   +    ++LINNAG+
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGM 93

Length = 241

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.2 bits (147), Expect = 7e-12
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           G  AIVTGAS GIG     +LA  G  V +A   N  A  ++ + I +E   A    ++ 
Sbjct: 5   GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDA--IAVKA 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMAS-PFM-LSKDNIELQFATN 137
           D+SS   V         K   ++IL+NNAGI        ++ +  +     N
Sbjct: 63  DVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVN 114

Length = 247

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGAS GIG      LA  G  V +  R+  A  +  + I           LE D+S
Sbjct: 2   VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKA--LGGNAAALEADVS 59

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
              +V         +  P++IL+NNAGI
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGI 87

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
            D  G    +TG + GIG  T R LA  G  V +   + A   +    +        V  
Sbjct: 1   DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVG 54

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
             LD++  AS   F         P+++L+NNAG+M
Sbjct: 55  GPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVM 89

Length = 273

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 2/117 (1%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTGA+ GIGA   R  A  G  V +A  + A       AI +++  A+V  +  D
Sbjct: 7   GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPAD 66

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLH 143
           ++  ASV    +       PL++L+NNAGI   A P  ++ ++    FA +  G+ +
Sbjct: 67  VTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWN 123

Length = 260

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 59.0 bits (143), Expect = 3e-11
 Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 23  QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV 82
           Q +D TG   ++TGASSGIG       A RG  V    R      D+ DA+   I  A  
Sbjct: 34  QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVAR----REDLLDAVADRITRAGG 89

Query: 83  D--VLELDLSSLASVRKFASDFTTKGLPLNILINNAG 117
           D   +  DLS L +V    +D   +   ++ILINNAG
Sbjct: 90  DAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 4e-11
 Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGASSGIG  T   LA  G  VF   RN A             P   V++LELD++
Sbjct: 6   VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA----------PIPGVELLELDVT 55

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
             ASV+    +   +   +++L+NNAG+
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGV 83

Length = 270

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 58.0 bits (141), Expect = 5e-11
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 2/93 (2%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D  G  A+VTGA+ GIG      LA  G  V +            + +      A+    
Sbjct: 3   DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKAR--AR 60

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++D+   A+++   +        L+IL+ NAGI
Sbjct: 61  QVDVRDRAALKAAVAAGVEDFGRLDILVANAGI 93

Length = 251

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 57.8 bits (140), Expect = 7e-11
 Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 4/119 (3%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           I+  G  A+VTGASSG+GA   +VLA  G  V +A R +    +++  I  E   A   V
Sbjct: 5   INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAH--V 62

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML--SKDNIELQFATNHLGS 141
           + LD++   S++   +   T+   ++IL+NN+G+  +  ++  +  + +  F TN  G+
Sbjct: 63  VSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGA 121

Length = 258

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 57.7 bits (140), Expect = 8e-11
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   ++TGAS GIGA      A  G H+ +  R+  A   +   +        V V  L
Sbjct: 6   AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHG-VDVAVHAL 64

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAG 117
           DLSS  +  + A++       ++IL+NNAG
Sbjct: 65  DLSSPEAREQLAAEAG----DIDILVNNAG 90

Length = 259

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL-- 85
            G  A+VTGAS GIG    + LA  G  V +   N A+     + +V EI  A    +  
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVV---NYASSKAAAEEVVAEIEAAGGKAIAV 58

Query: 86  ELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMASPFMLSKDNIEL--QFATNHLGSL 142
           + D+S  + V +   D   K    ++IL+NNAG+M    +      E    F  N  G+ 
Sbjct: 59  QADVSDPSQVAR-LFDAAEKAFGGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAF 117

Query: 143 H 143
            
Sbjct: 118 F 118

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 28/93 (30%), Positives = 45/93 (48%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           I   G  A+VTG SSGIG  T  +L   G  V +  R+       +  + ++ P A++  
Sbjct: 4   IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLA 63

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAG 117
              D+   A V  FA+    +   +++L+NNAG
Sbjct: 64  ARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG 96

Length = 265

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 55.6 bits (134), Expect = 3e-10
 Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 2/92 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGASSGIG  T R LA  G  V +A R +     + D +  E    K  VLEL
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGKALVLEL 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D++    V             L+IL+NNAGIM
Sbjct: 60  DVTDEQQVDAAVERTVEALGRLDILVNNAGIM 91

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 55.4 bits (134), Expect = 4e-10
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDL 89
            ++TGASSGIG    R  A  G +V +A R     TD  D +  E+  P   V+V  LD+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARR----TDRLDELKAELLNPNPSVEVEILDV 56

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI 118
           +     +   ++   +   L+++I NAG+
Sbjct: 57  TDEERNQLVIAELEAELGGLDLVIINAGV 85

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 56.0 bits (135), Expect = 5e-10
 Identities = 31/91 (34%), Positives = 47/91 (51%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           A VTG + GIG ET R LA  G HV +A  N+ A   V   I  +    +   L++D++ 
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD 476

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASP 122
             +V+   +D       ++I++NNAGI  S 
Sbjct: 477 EQAVKAAFADVALAYGGVDIVVNNAGIATSS 507

Length = 676

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 55.3 bits (134), Expect = 5e-10
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 5/89 (5%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDL 89
           A+VTGAS GIG      LA  G  V +  R+   G    + +V+E+     K   +  D+
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGA---EEVVEELKAYGVKALGVVCDV 57

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI 118
           S    V+    +   +  P++IL+NNAGI
Sbjct: 58  SDREDVKAVVEEIEEELGPIDILVNNAGI 86

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 55.7 bits (135), Expect = 6e-10
 Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLE 86
           G   ++TGASSGIG  T   +A  G  VF+  RN     +  D +V EI           
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARN----GEALDELVAEIRAKGGTAHAYT 426

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAG--IMASPFMLSKD---NIELQFATNHLGS 141
            DL+  A+V     D   +   ++ L+NNAG  I  S    S D   + E   A N+ G+
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRS-VENSTDRFHDYERTMAVNYFGA 485

Query: 142 LHLHM 146
           + L +
Sbjct: 486 VRLIL 490

Length = 657

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 54.9 bits (133), Expect = 7e-10
 Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 13/123 (10%)

Query: 24  GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD 83
            +D +G T  VTGA+ GIG          G  V         G D      ++ P     
Sbjct: 3   AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKV--------IGFDQAFLTQEDYP---FA 51

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGS 141
              LD+S  A+V +       +  PL++L+N AGI  M +   LS ++ +  FA N  G+
Sbjct: 52  TFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGA 111

Query: 142 LHL 144
            +L
Sbjct: 112 FNL 114

Length = 252

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 54.3 bits (131), Expect = 1e-09
 Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL-- 85
            G  A+VTGASSGIG      LA  G +V   V N  +  D  + +V+EI       +  
Sbjct: 2   KGKVALVTGASSGIGKAIAIRLATAGANV---VVNYRSKEDAAEEVVEEIKAVGGKAIAV 58

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMAS 121
           + D+S    V         +   L+IL+NNAG+   
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGLQGD 94

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 54.1 bits (131), Expect = 1e-09
 Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 17/120 (14%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           G   +VTGA+ GIG      L  RG   V+ A R+  + TD+   +V          L+L
Sbjct: 6   GKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVV---------PLQL 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE---LQFATNHLGSLHL 144
           D++  ASV   A   +     + IL+NNAGI  +  +L + + +    +  TN+ G L +
Sbjct: 57  DVTDPASVAAAAEAAS----DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Length = 238

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 54.4 bits (131), Expect = 2e-09
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 13/93 (13%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI---VKEIPTA--KVDVL 85
            A++TGAS+GIG  +   LA  G +V           D+ +A+   V +I +   K    
Sbjct: 8   VAVITGASTGIGQASAIALAQEGAYVLAV--------DIAEAVSETVDKIKSNGGKAKAY 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +D+S    V+ FAS+   +   +++L NNAG+
Sbjct: 60  HVDISDEQQVKDFASEIKEQFGRVDVLFNNAGV 92

Length = 272

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGA+SGIG    R L   G+ VF+  R           + +     + D    D+ 
Sbjct: 5   VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREA--GVEADGRTCDVR 62

Query: 91  SLASVRKFASDFTTKGLPLNILINNAG 117
           S+  +    +    +  P+++L+NNAG
Sbjct: 63  SVPEIEALVAAAVARYGPIDVLVNNAG 89

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 10/121 (8%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TG T ++TG +SGIG    +     G  V +  RN     + K     EI T   DV + 
Sbjct: 4   TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN-PEIHTEVCDVADR 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDN----IELQFATNHLGSLH 143
           D     S R+       +   LN+LINNAGI  +  +   ++     E + ATN L  + 
Sbjct: 63  D-----SRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIR 117

Query: 144 L 144
           L
Sbjct: 118 L 118

Length = 245

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAV---RNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            A+VTG S GIG  T  +LA  G  V  AV   +N+ A  +V + I +     K  VL+ 
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTV--AVNYQQNLHAAQEVVNLITQA--GGKAFVLQA 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM---LSKDNIELQFATNHLGS 141
           D+S    V    +       PL  L+NNAGI+ +      L+ + I    +TN  G 
Sbjct: 59  DISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGY 115

Length = 247

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 53.5 bits (129), Expect = 2e-09
 Identities = 34/112 (30%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AIVTGA SG G    R  A  G  V +A  N      V      +I  A +  ++ D
Sbjct: 5   GKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERV----AADIGEAAI-AIQAD 59

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML---SKDNIELQFATN 137
           ++  A V        +K   L+IL+NNAGI      +    ++  +  FA N
Sbjct: 60  VTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVN 111

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 53.7 bits (129), Expect = 3e-09
 Identities = 34/95 (35%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 34  VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA 93
           +TG+S G+G    R L  +G  V +  R+     D K A     P A   VL  DLSSLA
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAA----CPGAAG-VLIGDLSSLA 66

Query: 94  SVRKFASDFTTKGLPLNILINNAGIMASPFMLSKD 128
             RK A      G   + +I+NAGI++ P   + D
Sbjct: 67  ETRKLADQVNAIG-RFDAVIHNAGILSGPNRKTPD 100

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVK-EIPTAKVDVLELDL 89
            AI+TG+SSGIGA T  + A  G  + +  R+     + + + ++  +   K+ ++  DL
Sbjct: 5   VAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADL 64

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           +      +  S    K   L+IL+NNAGI+A
Sbjct: 65  TEEEGQDRIISTTLAKFGRLDILVNNAGILA 95

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 53.1 bits (128), Expect = 4e-09
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
              G  A+VTGAS GIG      LA  G ++ +  RN     + +  I KE    +    
Sbjct: 2   SLKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKE--GVEATAF 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             D+S   +++            ++IL+NNAGI
Sbjct: 60  TCDVSDEEAIKAAVEAIEEDFGKIDILVNNAGI 92

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 53.0 bits (128), Expect = 4e-09
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           A+VTGA+ GIG      LA RG +V +  R       V   I ++    +   +  D S+
Sbjct: 4   AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYG-VETKTIAADFSA 62

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIM 119
              + +       +GL + IL+NN GI 
Sbjct: 63  GDDIYERIEK-ELEGLDIGILVNNVGIS 89

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 53.3 bits (129), Expect = 4e-09
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 5/90 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTGA+ GIGA    VLA  G HV + +   AAG  +  A+   +       L LD
Sbjct: 210 GKVALVTGAARGIGAAIAEVLARDGAHV-VCLDVPAAGEAL-AAVANRV---GGTALALD 264

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +++  +  + A     +   L+I+++NAGI
Sbjct: 265 ITAPDAPARIAEHLAERHGGLDIVVHNAGI 294

Length = 450

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 6e-09
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 7/92 (7%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLE---LD 88
             VTGA+SGIG  T   LA +G  +F+  R+ A G       V +       V E   LD
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRD-ADGL---AQTVADARALGGTVPEHRALD 58

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           +S   +V  FA+D       +++++N AGI A
Sbjct: 59  ISDYDAVAAFAADIHAAHGSMDVVMNIAGISA 90

Length = 272

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 52.3 bits (126), Expect = 6e-09
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           AI+TG +SGIG  T ++L  +G  V +  RN   G      +    P  K   ++ D++S
Sbjct: 3   AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGA--AAELQAINPKVKATFVQCDVTS 60

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ 133
              +         K   ++ILINNAGI+     L    +   
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPP 102

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 52.7 bits (127), Expect = 6e-09
 Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            +VTGA SGIG ET    A  G  V  +  + AA     + I      A      +D+S 
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYR--VDVSD 375

Query: 92  LASVRKFASDF-TTKGLPLNILINNAGI-MASPFM 124
             ++  FA       G+P +I++NNAGI MA  F+
Sbjct: 376 ADAMEAFAEWVRAEHGVP-DIVVNNAGIGMAGGFL 409

Length = 582

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 52.1 bits (125), Expect = 7e-09
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 12/122 (9%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           +D  G  A+VTGA  GIG  T + LA  G  V    R  A   D+ D++V+E P   ++ 
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQA---DL-DSLVRECPG--IEP 56

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSL 142
           + +DLS   +  +          P+++L+NNA + +  PF+ ++K+  +  F  N    +
Sbjct: 57  VCVDLSDWDATEEALG----SVGPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVI 112

Query: 143 HL 144
           H+
Sbjct: 113 HV 114

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 8e-09
 Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 9/119 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--D 88
             I+TGAS GIG      LA  G  + +A RN         ++ +E+     + L +  D
Sbjct: 3   VVIITGASEGIGRALAVRLARAGAQLVLAARNETR----LASLAQELADHGGEALVVPTD 58

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKDNIELQ--FATNHLGSLHL 144
           +S   +  +       +   ++IL+NNAGI M S F    D    +     N+LG+++ 
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYC 117

Length = 263

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  AIVTGASSGIG    R  A  G  V +  RN  A   V   I+      +   +  
Sbjct: 4   EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAG---GRAIAVAA 60

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S  A V    +    +   ++IL+NNAG 
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGT 91

Length = 251

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 51.9 bits (125), Expect = 8e-09
 Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL- 87
           G  A+VT ASSGIG    R LA  G  V +  RN        +    E+      VL + 
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNREN----LERAASELRAGGAGVLAVV 56

Query: 88  -DLSSLASVRKFASDFTTKGLPLNILINNAG 117
            DL+    + +           ++IL+NNAG
Sbjct: 57  ADLTDPEDIDRLVEKAGDAFGRVDILVNNAG 87

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  A+VTGAS GIG      LA +G +V +   +  AG    +A+V EI     K   +
Sbjct: 4   EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGA---EALVAEIGALGGKALAV 60

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM 124
           + D+S   SV +   +   +   ++IL+NNAGI   +  M
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLM 100

Length = 248

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 52.2 bits (126), Expect = 1e-08
 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+ GIG  T + LA  G  V +A  +  A       +        V     
Sbjct: 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGV---AC 477

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASP 122
           D++  A+V+    +       ++I+++NAGI  S 
Sbjct: 478 DVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISG 512

Length = 681

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+ G+GA     LA  G  V       A   ++  A+  E    +   +  
Sbjct: 6   AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAAL--EAAGGRAHAIAA 63

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATN 137
           DL+  ASV++F          L+ L+NNAGI  S     L  D  +     N
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVN 115

Length = 250

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 31/93 (33%), Positives = 42/93 (45%), Gaps = 11/93 (11%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D +G + +VTGASSGIG      LA RG  V  A RN AA   +             + L
Sbjct: 6   DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPL 58

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            LD+   A++R   +         + L+N AGI
Sbjct: 59  RLDVGDDAAIRAALAAAG----AFDGLVNCAGI 87

Length = 245

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVD 83
           D  G TA+VTG+S GIGA+T ++LA  G HV +  R  A      + +V EI  A  +  
Sbjct: 3   DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRA---NKVVAEIEAAGGRAS 59

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNA 116
            +  DL+   SV         +   L+ L+ NA
Sbjct: 60  AVGADLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 4/90 (4%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           GL  +VTG +SGIG       A  G  V +   + AA      A    +P AKV     D
Sbjct: 11  GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA----LAATAARLPGAKVTATVAD 66

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++  A V +       +   L++L+NNAGI
Sbjct: 67  VADPAQVERVFDTAVERFGGLDVLVNNAGI 96

Length = 264

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 50.7 bits (122), Expect = 2e-08
 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI---PTAKVDVL 85
           G  A +TG  +GIG    +  A  G  V +A R      +V +A  +EI      +   +
Sbjct: 3   GKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKP----EVLEAAAEEISSATGGRAHPI 58

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAG 117
           + D+    +V     +   +   ++ILINNA 
Sbjct: 59  QCDVRDPEAVEAAVDETLKEFGKIDILINNAA 90

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 50.7 bits (122), Expect = 3e-08
 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 4/112 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TG  SGIG       A RG  V +   N     +  + + K          + D+S
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVH--YYKCDVS 58

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLG 140
               V + A     +   + ILINNAG+++      L  + IE  F  N L 
Sbjct: 59  KREEVYEAAKKIKKEVGDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLA 110

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional

 Score = 50.5 bits (121), Expect = 3e-08
 Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 11/120 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           + ++TG SSGIG E    L  RG  V  A R        K   V  + +     + LDL 
Sbjct: 4   SVLITGCSSGIGLEAALELKRRGYRVLAACR--------KPDDVARMNSLGFTGILLDLD 55

Query: 91  SLASVRKFASD-FTTKGLPLNILINNAGI-MASPF-MLSKDNIELQFATNHLGSLHLHML 147
              SV + A +        L  L NNAG  +  P   +S+  +E QF+TN  G+  L ML
Sbjct: 56  DPESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTML 115

Length = 256

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGAS GIG E  R LA  G  V + +RN      +  +         V+ +  D  
Sbjct: 2   VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSASG------GDVEAVPYDAR 55

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
                R        +   +++L++NAGI   +     S   +E  F+ N +    L
Sbjct: 56  DPEDARALVDALRDRFGRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAEL 111

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 50.3 bits (121), Expect = 4e-08
 Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGASSGIG  T R LA +G  V+ A R +    D+    V          L LD++
Sbjct: 5   VALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVH--------PLSLDVT 56

Query: 91  SLASVRKFASDFTTKGLPLNILINNAG 117
             AS++        +   +++L+NNAG
Sbjct: 57  DEASIKAAVDTIIAEEGRIDVLVNNAG 83

Length = 273

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 11/100 (11%)

Query: 28  TGLTAIVTGAS--SGIGAETTRVLALRGVHVFMA-----VRNMAAGTDVKDAIV--KEI- 77
               A+VTGAS  +GIGA   R LA +G+ +F        + M  G   K+ ++  +EI 
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE 63

Query: 78  -PTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNA 116
               + + +E+DLS   +  +     + +    +ILINNA
Sbjct: 64  SYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA 103

Length = 256

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 49.6 bits (118), Expect = 6e-08
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV--LE 86
           G  AIVTG + GIG   T  LA  G  V +   N  +  +  + +V E+     DV  ++
Sbjct: 6   GKVAIVTGGAKGIGKAITVALAQEGAKVVI---NYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            D+S +    +   +       ++IL+NNAGI
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGI 94

Length = 247

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 49.2 bits (118), Expect = 7e-08
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A++TG S GIG      L   G  V +  R+     +    +  +     V  L  
Sbjct: 5   KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAA 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+   A V++           L++LI NAG+
Sbjct: 62  DVRDEADVQRAVDAIVAAFGGLDVLIANAGV 92

Length = 237

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 49.5 bits (119), Expect = 7e-08
 Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 10/95 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+SGIG E    LA  G  V +A  N  A     +A+ K     K   + +
Sbjct: 3   KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAM 60

Query: 88  DLSSL----ASVRKFASDFTTKGLPLNILINNAGI 118
           D++      A +      F      ++IL+NNAGI
Sbjct: 61  DVTDEEAINAGIDYAVETFGG----VDILVNNAGI 91

Length = 258

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 49.2 bits (118), Expect = 8e-08
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 6/91 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            GL A+VTG +SG+G  T   L  +G  V +     + G  V               + +
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVAKLGD------NCRFVPV 54

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++S   V+   +    K   L+I++N AGI
Sbjct: 55  DVTSEKDVKAALALAKAKFGRLDIVVNCAGI 85

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.9 bits (117), Expect = 9e-08
 Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 2/95 (2%)

Query: 24  GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD 83
                G  A++TGA  GIG      LA  GV+V +  R       V + +       KV 
Sbjct: 2   AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVV 59

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +   D+S    V         +   ++ILINNAGI
Sbjct: 60  IATADVSDYEEVTAAIEQLKNELGSIDILINNAGI 94

Length = 239

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 6/103 (5%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAK 81
           T   D TG  A+VTGAS GIG    ++LA +G HV ++ R +     V DAIV     A+
Sbjct: 1   TNLFDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAE 60

Query: 82  VDVLEL-DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPF 123
                + ++  + ++  FA      G  L+IL+NNA   A+P+
Sbjct: 61  ALACHIGEMEQIDAL--FAHIRERHG-RLDILVNNAA--ANPY 98

Length = 252

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA-KVDV 84
                 AIVTGA+ GIG      LA  G  V +A  N      V   IV +  TA  V V
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
              D+S   S +  A    +    ++ L+NNA I 
Sbjct: 63  ---DVSDPDSAKAMADATVSAFGGIDYLVNNAAIY 94

Length = 250

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
            A+VTGA+ G+G      LA  G  V +  R+        + +V+ +     +   ++ D
Sbjct: 8   VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAA---EELVEAVEALGRRAQAVQAD 64

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++  A++    +    +   ++IL+NNAGI
Sbjct: 65  VTDKAALEAAVAAAVERFGRIDILVNNAGI 94

Length = 249

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 30/90 (33%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AIVTG S GIG    R LA  G  V +   +     +  + + K+    K    + D
Sbjct: 8   GKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-KTKAYKCD 66

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +SS  SV K           ++ILI NAGI
Sbjct: 67  VSSQESVEKTFKQIQKDFGKIDILIANAGI 96

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 30/90 (33%), Positives = 41/90 (45%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G TA++TGAS GIG    R     G  V +  R+  A    +D + +E P  +V  L  D
Sbjct: 9   GQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAAD 68

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +S     R            L+IL+NNAG 
Sbjct: 69  VSDDEDRRAILDWVEDHWDGLHILVNNAGG 98

Length = 257

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 5/94 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
           +   AIVTGAS GIGA   R LA  G   F    N A      D +V EI  A  +   +
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADG---FAVAVNYAGSAAAADELVAEIEAAGGRAIAV 60

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           + D++  A+V +      T    +++L+NNAG+M
Sbjct: 61  QADVADAAAVTRLFDAAETAFGRIDVLVNNAGVM 94

Length = 245

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 47.4 bits (113), Expect = 4e-07
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG++ G+G E  R LA  G HV +  RN A       A+      A  + L  
Sbjct: 10  AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAA--EALAF 67

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAG 117
           D++   +V    +    +   L+IL+NN G
Sbjct: 68  DIADEEAVAAAFARIDAEHGRLDILVNNVG 97

Length = 256

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL-- 85
            G  A+VTGAS GIGA   R L   G+ V    R +    D  +A+  E  +A    L  
Sbjct: 5   RGRVALVTGASVGIGAAVARALVQHGMKVVGCARRV----DKIEALAAECQSAGYPTLFP 60

Query: 86  -ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLS 126
            + DLS+   +    S   T+   +++ INNAG+     +LS
Sbjct: 61  YQCDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPEPLLS 102

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 47.0 bits (112), Expect = 5e-07
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D +G  A+VTG +SGIG     + A +G  V +  R+     DV +   + +       L
Sbjct: 12  DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRS----EDVAEVAAQLLGGNAKG-L 66

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             D+S   SV    +   +    ++IL+N+AG+
Sbjct: 67  VCDVSDSQSVEAAVAAVISAFGRIDILVNSAGV 99

Length = 255

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 46.6 bits (111), Expect = 6e-07
 Identities = 33/117 (28%), Positives = 49/117 (41%), Gaps = 7/117 (5%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLELDL 89
           A+VTG S GIG      LA RG  V   V N     D    +  EI     K  V+  D+
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADV---VINYRKSKDAAAEVAAEIEELGGKAVVVRADV 57

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
           S    V +  +    +   L++L++NA   A  P   L+  + + +  TN    +H 
Sbjct: 58  SQPQDVEEMFAAVKERFGRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHC 114

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 46.5 bits (111), Expect = 7e-07
 Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 14/102 (13%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK----DAIVKEIPTAKVDV 84
           G  A++TGA+SG G    R+ A  G+ + +A        DV+    D  V E+     +V
Sbjct: 6   GKVAVITGAASGFGLAFARIGAALGMKLVLA--------DVQQDALDRAVAELRAQGAEV 57

Query: 85  L--ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
           L    D+S  A V   A     +   +++L NNAG+ A   +
Sbjct: 58  LGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLV 99

Length = 287

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 46.4 bits (111), Expect = 7e-07
 Identities = 32/135 (23%), Positives = 47/135 (34%), Gaps = 19/135 (14%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
               G  A++TG    +G    + LA  G  V +  RN      V   I      A    
Sbjct: 6   FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEAL--A 63

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAG-------------IMASP----FMLSK 127
           ++ D+    S+ +          P +ILIN AG              +  P    F L +
Sbjct: 64  VKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDE 123

Query: 128 DNIELQFATNHLGSL 142
           +  E  F  N LG+L
Sbjct: 124 EGFEFVFDLNLLGTL 138

Length = 278

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 46.7 bits (111), Expect = 7e-07
 Identities = 40/122 (32%), Positives = 54/122 (44%), Gaps = 11/122 (9%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLE 86
           G TA+VTG + GIG      LA  G  V+   RN        D  + E      KV+   
Sbjct: 6   GKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKE----LDECLTEWREKGFKVEGSV 61

Query: 87  LDLSSLASVRKFASDFTTK--GLPLNILINNAG--IMASPFMLSKDNIELQFATNHLGSL 142
            D+SS  S R+   D      G  LNIL+NNAG  I       ++++  L  +TN   + 
Sbjct: 62  CDVSS-RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAY 120

Query: 143 HL 144
           HL
Sbjct: 121 HL 122

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 8e-07
 Identities = 28/86 (32%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 34  VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA 93
           +TGA+SGIG  T  + A  G  V     N A       A+  E+         LD++  A
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAG----LAALAAELGAGNAWTGALDVTDRA 61

Query: 94  SVRKFASDFTTK-GLPLNILINNAGI 118
           +     +DF    G  L++L NNAGI
Sbjct: 62  AWDAALADFAAATGGRLDVLFNNAGI 87

Length = 260

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 46.6 bits (111), Expect = 8e-07
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 9/117 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T  +TGASSG G   T  L  RG  V   VR   A  D+K          ++ VL+LD++
Sbjct: 4   TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGD-----RLWVLQLDVT 58

Query: 91  SLASVRKFASD-FTTKGLPLNILINNAG--IMASPFMLSKDNIELQFATNHLGSLHL 144
             A+VR      F   G  ++++++NAG  +  +   LS   I  Q  TN +GS+ +
Sbjct: 59  DSAAVRAVVDRAFAALG-RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQV 114

Length = 276

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
             TAIVTG   GIG  T R  A  G  V +   N  A   V   I  +   A+      D
Sbjct: 3   DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQ--AFACD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLS-KDNIELQFATNHLGSLHLH 145
           ++   SV    +       P+++L+NNAG     PF  +     E   A N  G+LH+H
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMH 119

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score = 46.3 bits (110), Expect = 9e-07
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AI+TG +SGIG  T R+ A  G  V +A  +  AG     A+  E+    +  +  D
Sbjct: 4   GKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAG----QAVAAELGDPDISFVHCD 59

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASP--FML--SKDNIELQFATNHLG 140
           ++  A VR        +   L+I+ NNAG++ +P   +L  S +  E     N  G
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYG 115

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 11/115 (9%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            IVTGA+ GIG    R L   G  V           D+   ++ E     + +  LD++ 
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATV--------IALDLPFVLLLEYG-DPLRLTPLDVAD 51

Query: 92  LASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHL 144
            A+VR+  S    +  P++ L+N AG+    +   LS ++ E  FA N  G  +L
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNL 106

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AIVTGA SGIG  T ++ A  G  V +A R+  A   V  AI       +    + D
Sbjct: 5   GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAG---GRAFARQGD 61

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAG 117
           + S  +V         +   L++L+NNAG
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNAG 90

Length = 252

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 7/116 (6%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A++TGA+SGIG          G  V +A    A        I           + LD
Sbjct: 6   GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSL 142
           ++   S+ +  +    +   ++IL NNA +  MA    +S+D+ +  FA N  G  
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLF 116

Length = 257

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 10/89 (11%)

Query: 31  TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           T +VTGA+ GIG      L   G   V+ AVR+  +       +V +    KV  L LD+
Sbjct: 5   TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAH----LVAKYG-DKVVPLRLDV 59

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI 118
           +   S++  A+    +   ++++INNAG+
Sbjct: 60  TDPESIKAAAA----QAKDVDVVINNAGV 84

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 16/121 (13%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK----DAIVKEIPTA--KVDVL 85
            +VTGA+ GIG    R LA  G  V        A  D        +V ++          
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARV--------AAVDRNFEQLLELVADLRRYGYPFATY 52

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLH 143
           +LD++  A+V +       +  P+++L+N AGI  + +   LS ++ +  FA N  G  +
Sbjct: 53  KLDVADSAAVDEVVQRLEREYGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFN 112

Query: 144 L 144
           +
Sbjct: 113 V 113

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 31  TAIVTGASSGIGAETTRVLA---LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
             ++TG SSGIG      LA    +   V+  +R++     + +A    +    ++ L+L
Sbjct: 2   VVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEA-AGALAGGTLETLQL 60

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHL 144
           D+    SV             +++L+ NAG+  +     LS+D +   F  N  G++ +
Sbjct: 61  DVCDSKSVAAAVE--RVTERHVDVLVCNAGVGLLGPLEALSEDAMASVFDVNVFGTVRM 117

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 13/93 (13%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
                 AIVTG S GIG      L   G +V              +  +KE     VD  
Sbjct: 3   GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVI-------------NFDIKEPSYNDVDYF 49

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++D+S+   V K      +K   ++IL+NNAGI
Sbjct: 50  KVDVSNKEQVIKGIDYVISKYGRIDILVNNAGI 82

Length = 258

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
               G  AIVTG + G+G    R+L   G  V ++      G     A   E+  A    
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEG----QAAAAELGDAAR-F 55

Query: 85  LELDLSSLASVRKFASDFTTKGL-PLNILINNAGI 118
             LD++          D   +    L++L+NNAGI
Sbjct: 56  FHLDVTDEDGWTA-VVDTAREAFGRLDVLVNNAGI 89

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 23/89 (25%), Positives = 45/89 (50%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G T ++TGA   IG+   + +   G  V  A  +  A  ++ +++ KE  + K+ ++EL
Sbjct: 3   KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVEL 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNA 116
           D++   S+ +F S    K   ++  +N A
Sbjct: 63  DITDQESLEEFLSKSAEKYGKIDGAVNCA 91

Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 34  VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD--VLELDLSS 91
           +TGA+SG+G       A  G  + +A  N   G    +  +K +  A  D      D+  
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGG----EETLKLLREAGGDGFYQRCDVRD 60

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLG 140
            + +   A     K   +++++NNAG+ +  F   LS ++ + Q A N +G
Sbjct: 61  YSQLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMG 111

Length = 270

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDL 89
            A+VTGA  GIG+   R L   G  V            D  +         +V + ELD+
Sbjct: 4   IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFE--EYGFTEDQVRLKELDV 61

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI 118
           +      +  ++   +  P++IL+NNAGI
Sbjct: 62  TDTEECAEALAEIEEEEGPVDILVNNAGI 90

Length = 245

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TA+VTGA+ GIG    R     G  V     + AA      A    +  A+   +  DL+
Sbjct: 4   TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAAL----AAFADALGDARFVPVACDLT 59

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMAS 121
             AS+    ++   +  P+++L+ NAG   +
Sbjct: 60  DAASLAAALANAAAERGPVDVLVANAGAARA 90

Length = 257

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 12/120 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
              T ++TGA SG G E    LA +G +V   V+     T ++    +      + V +L
Sbjct: 1   MSKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKL 58

Query: 88  DLSSLASVRKFAS-DFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHL 144
           DL+      + A  D        ++L+NNAGI  +  +  +  + +   F TN  G L L
Sbjct: 59  DLTDAIDRAQAAEWDV-------DVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLEL 111

Length = 257

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G TA+VTGA+SGIG    R LA  G +V +             A V       V  L  D
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAE--AAAKVAGDAGGSVIYLPAD 58

Query: 89  LSSLASV----RKFASDFTTKGLPLNILINNAGI 118
           ++    +       A++F      L+IL+NNAGI
Sbjct: 59  VTKEDEIADMIAAAAAEFGG----LDILVNNAGI 88

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 10/97 (10%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN----MAAGTDVKDAIVKEIPTAK 81
           D TG  A+VTG+S GIG      LA  G  V +  R+     AA   +K           
Sbjct: 7   DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ------GLS 60

Query: 82  VDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
              L  D++   +VR     F  +  P++IL+NNAG+
Sbjct: 61  AHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGM 97

Length = 255

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 11/94 (11%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL-EL 87
           G  AIVTGA +GIGA     LA  G  V +A  +  A   V   I       +VDV  E 
Sbjct: 3   GKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALALRVDVTDEQ 62

Query: 88  DLSSL--ASVRKFASDFTTKGLPLNILINNAGIM 119
            +++L   +V +F          L++L+NNAG M
Sbjct: 63  QVAALFERAVEEFGG--------LDLLVNNAGAM 88

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 7/95 (7%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL- 87
           G  A+VTG +SGIG    + LA  G  V +A  +           V E        L + 
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIA-----EKVAEAAQGGPRALGVQ 55

Query: 88  -DLSSLASVRKFASDFTTKGLPLNILINNAGIMAS 121
            D++S A V+        +   L+I+++NAGI  S
Sbjct: 56  CDVTSEAQVQSAFEQAVLEFGGLDIVVSNAGIATS 90

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVL 85
           TG TA++TGA  GIG    RV A  G ++ +         ++ + +  E+     +   +
Sbjct: 5   TGKTALITGALQGIGEGIARVFARHGANLILL----DISPEI-EKLADELCGRGHRCTAV 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
             D+   ASV         K   ++IL+NNAG+     F+ +S ++ +     N
Sbjct: 60  VADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDIN 113

Length = 263

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 21  VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA 80
           V +  D +G TA+VTG S G+G +    L   G  V ++ R         +     +   
Sbjct: 4   VLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE----LEEAAAHLEAL 59

Query: 81  KVDVLEL--DLSSLASVRKFASDFTTKGLPLNILINNAG 117
            +D L +  D++  A + + A +   +   ++IL+NNAG
Sbjct: 60  GIDALWIAADVADEADIERLAEETLERFGHVDILVNNAG 98

Length = 259

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 44.4 bits (105), Expect = 4e-06
 Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 8/116 (6%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            I+TGAS GIGA T  + A RG  V +  +RN  A   V  AI ++   A    +  D++
Sbjct: 5   MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL--AVAADVA 62

Query: 91  SLASV-RKFASDFTTKGLPLNILINNAGIMASPFMLSK-DNIELQ--FATNHLGSL 142
             A V R F +     G  L+ L+NNAGI+ +   L + D   L   FATN +GS 
Sbjct: 63  DEADVLRLFEAVDRELG-RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSF 117

Length = 248

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 44.5 bits (106), Expect = 4e-06
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSS 91
           ++TGAS GIG      LA  G  + +  RN        +A+   +P   +   +  DL+S
Sbjct: 9   LLTGASGGIGQALAEALAAAGARLLLVGRNAEK----LEALAARLPYPGRHRWVVADLTS 64

Query: 92  LASVRKFASDFTTKGLPLNILINNAGI 118
            A           +   +N+LINNAG+
Sbjct: 65  EAGREAVL-ARAREMGGINVLINNAGV 90

Length = 263

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 44.1 bits (105), Expect = 6e-06
 Identities = 32/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--D 88
             ++TGAS+G+G  T R  A RG  V +  R         +A+  EI  A  + L +  D
Sbjct: 10  VVVITGASAGVGRATARAFARRGAKVVLLARGEEG----LEALAAEIRAAGGEALAVVAD 65

Query: 89  LSSLASVRKFASDFTTKGL-PLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLH 143
           ++   +V+  A+D   + L P++  +NNA + +  PF  ++ +         +LG +H
Sbjct: 66  VADAEAVQA-AADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVH 122

Length = 334

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 7e-06
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AIVTG ++ IGA   R L   G  V +   +   G  V  ++ +       D+ + D
Sbjct: 6   GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITD-D 64

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNA 116
            +   +V    + F      ++IL+N A
Sbjct: 65  AAIERAVATVVARFGR----VDILVNLA 88

Length = 261

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 43.4 bits (102), Expect = 8e-06
 Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 8/94 (8%)

Query: 32  AIVTGASSGIGAETTRVLALR----GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            +VTGAS G G    + LA      G  + ++ RN  A   +K  I  E    +V  + L
Sbjct: 3   CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSL 62

Query: 88  DLSSLASVRKFASDFTTKGLPLN----ILINNAG 117
           DL + A + +          P      +LINNAG
Sbjct: 63  DLGAEAGLEQLLKALRELPRPKGLQRLLLINNAG 96

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 43.5 bits (103), Expect = 9e-06
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AIVT + SGIG     +LA +G  + +   +   G       V+     + ++ +LDLS
Sbjct: 4   VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH-GVRAEIRQLDLS 62

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM 124
            L    +       +   +++L+NNAG M  +PF+
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAMTKAPFL 97

Length = 256

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 6/120 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLEL 87
           T +VTG   G+G E  R LA RG  H+ +  R+ A   + +  +  E+    A+V V+  
Sbjct: 2   TYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALL-AELEARGAEVTVVAC 60

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGSLHLH 145
           D+S   +VR   ++    G PL  +I+ AG++    + +    +     A    G+ +LH
Sbjct: 61  DVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDFARVLAPKVTGAWNLH 120

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 4/92 (4%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTG + GIG      LA +G+++ +  RN     DV D+I  +    ++  + +D
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVD 112

Query: 89  LSSLAS--VRKFASDFTTKGLPLNILINNAGI 118
            S      V++     T +GL + +LINN G+
Sbjct: 113 FSGDIDEGVKRIKE--TIEGLDVGVLINNVGV 142

Length = 320

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           A+VTGAS GIG  T R+L   G  V +  R+      +  A  +E+    V  L  D+  
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARD---EARLAAAAAQELE--GVLGLAGDVRD 57

Query: 92  LASVRKFASDFTTKGLPLNILINNAGI 118
            A VR+           L+ L+NNAG+
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGV 84

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 3/109 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +VTG+  GIG      LA  G  V +  +  A   +    +VKE     + VL  D+S
Sbjct: 8   VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLA-DVS 66

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKDN-IELQFATN 137
           +       A     +    +IL+NNAG+ + SPF+   D  I+   +T+
Sbjct: 67  TREGCETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTD 115

Length = 252

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 25/116 (21%), Positives = 43/116 (37%), Gaps = 6/116 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G    +TG   G+G  T   LA RG  V +  R  A         +  +P   + +  +D
Sbjct: 7   GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAP----LSQTLPGVPADALRIGGID 62

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSL 142
           L    + R+   +   +   L+ L+N AG      +     D  +  +  N   +L
Sbjct: 63  LVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTL 118

Length = 239

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 42.6 bits (101), Expect = 2e-05
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 6/93 (6%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLE 86
           G  AI+TGASSGIG    ++ A  G  V +  R  A      D +V EI     +   L 
Sbjct: 6   GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAE----LDQLVAEIRAEGGEAVALA 61

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
            D+   A  +   +    +   L+I  NNAG +
Sbjct: 62  GDVRDEAYAKALVALAVERFGGLDIAFNNAGTL 94

Length = 254

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 2/89 (2%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELDL 89
            ++TG S G+G      LA  G  V +   +   G    DA+   I  A  K   L  D+
Sbjct: 9   VLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDV 68

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI 118
              A+ R        +   L+IL+NNAGI
Sbjct: 69  RDFAATRAALDAGVEEFGRLDILVNNAGI 97

Length = 249

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 32/98 (32%), Positives = 41/98 (41%), Gaps = 17/98 (17%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI----VKEIPTAKVDV 84
           G  A++TG  SGIG  T R LA  G  V +   +  AG    D +    V    T +  V
Sbjct: 7   GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAV 66

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASP 122
             L          F +   T G  ++I  NNAGI  SP
Sbjct: 67  NAL----------FDTAAETYG-SVDIAFNNAGI--SP 91

Length = 255

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
             I+TGAS GIG      L  RG    V +  R+      +++   +  P  +V  ++ D
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE---EPLQELKEELRPGLRVTTVKAD 57

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           LS  A V +            ++LINNAG + 
Sbjct: 58  LSDAAGVEQLLEAIRKLDGERDLLINNAGSLG 89

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTGA++G+G      LA  G  +  A    +  ++ +  +       +   L  D
Sbjct: 5   GKVALVTGANTGLGQGIAVGLAEAGADIVGA--GRSEPSETQQQVEAL--GRRFLSLTAD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           LS + +++        +   ++IL+NNAGI+
Sbjct: 61  LSDIEAIKALVDSAVEEFGHIDILVNNAGII 91

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 42.0 bits (99), Expect = 2e-05
 Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 6/88 (6%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--DLS 90
           ++TGASSGIG  T    A RG  V +A R+     +    + +E+     + + +  D++
Sbjct: 4   VITGASSGIGRATALAFAERGAKVVLAARS----AEALHELAREVRELGGEAIAVVADVA 59

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
             A V + A     +   ++  +NNAG+
Sbjct: 60  DAAQVERAADTAVERFGRIDTWVNNAGV 87

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 42.3 bits (100), Expect = 3e-05
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 13/115 (11%)

Query: 34  VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA 93
           +TGAS G G   T     RG  V    R+ A   D+ +     +    +DV +      A
Sbjct: 8   ITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAA 67

Query: 94  ---SVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLH 143
              +V  F          L+I++NNAG      +  +++     Q  TN  G+L 
Sbjct: 68  VETAVEHFGR--------LDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALW 114

Length = 275

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 41.9 bits (99), Expect = 3e-05
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 1/91 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                ++TGA+  IG    + L   G  + +A  N  A   +K+ +   +   +V  LEL
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEEL-TNLYKNRVIALEL 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++S  S+++    +  K   ++ILINNA  
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYP 90

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 41.8 bits (99), Expect = 3e-05
 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 11/88 (12%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TA++TGAS GIGA   R LA     + +  R      +  D +  E+P A      +DL+
Sbjct: 5   TALITGASRGIGAAIARELA-PTHTLLLGGRP----AERLDELAAELPGAT--PFPVDLT 57

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
              ++             L++L++NAG+
Sbjct: 58  DPEAIAAAVEQLG----RLDVLVHNAGV 81

Length = 227

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+V GASSGIGA T   LA  G  V +  R +    ++ D I  +   A      LD++
Sbjct: 12  PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAV--AFPLDVT 69

Query: 91  SLASVRKFASDFTTKGLPLNILINNAG 117
              SV+ F +        + +L++ AG
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAG 96

Length = 274

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 22/132 (16%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLE 86
              A++TG +  +G    R LA  G  V    RN   G    D + KEI     +   L 
Sbjct: 5   NKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKG----DKVAKEITALGGRAIALA 60

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAG----------------IMASPFMLSKDNI 130
            D+   AS+ +   +   +   ++ILIN AG                   + F L ++  
Sbjct: 61  ADVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGW 120

Query: 131 ELQFATNHLGSL 142
           E  F  N  GS 
Sbjct: 121 EFVFDLNLNGSF 132

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 11/121 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
            AIVTGAS GIG      LA RG   F    N     D    +V E+  A  +    + D
Sbjct: 3   VAIVTGASRGIGRAIATELAARG---FDIAINDLPDDDQATEVVAEVLAAGRRAIYFQAD 59

Query: 89  LSSLASVRKFASDFTTKGL-PLNILINNAGIMASP----FMLSKDNIELQFATNHLGSLH 143
           +  L+   +   D   +    L+ L+NNAGI   P      L++D+ +   A N  G   
Sbjct: 60  IGELSD-HEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFF 118

Query: 144 L 144
           L
Sbjct: 119 L 119

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 14/121 (11%)

Query: 30  LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELD 88
           L   +TGASSGIG    R  A +G  + +  R     TD   A    +P  A+V V   D
Sbjct: 3   LKVFITGASSGIGQALAREYARQGATLGLVARR----TDALQAFAARLPKAARVSVYAAD 58

Query: 89  LSSLASVRKFASDFTTK-GLPLNILINNAGIMASPFMLSKDNIELQ-----FATNHLGSL 142
           +    ++   A+DF    GLP +++I NAGI  S   L+++  +L        TN+ G +
Sbjct: 59  VRDADALAAAAADFIAAHGLP-DVVIANAGI--SVGTLTEEREDLAVFREVMDTNYFGMV 115

Query: 143 H 143
            
Sbjct: 116 A 116

Length = 257

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 40.9 bits (96), Expect = 6e-05
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL- 87
           G  A+VTG++SGIG    R LA  G ++   +       +++           V VL   
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIV--LNGFGDAAEIEAVRAGLAAKHGVKVLYHG 59

Query: 88  -DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            DLS  A++    +    +   ++IL+NNAGI
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGI 91

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 13/118 (11%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           + ++TG SSGIGA   R L   G  VF   R        K+  V  +    ++  +LD +
Sbjct: 6   SILITGCSSGIGAYCARALQSDGWRVFATCR--------KEEDVAALEAEGLEAFQLDYA 57

Query: 91  SLASVRKFASD-FTTKGLPLNILINNAGIMASPFM---LSKDNIELQFATNHLGSLHL 144
              S+    +      G  L+ L NN G    P     L  + +  QF  N  G   L
Sbjct: 58  EPESIAALVAQVLELSGGRLDALFNN-GAYGQPGAVEDLPTEALRAQFEANFFGWHDL 114

Length = 277

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.7 bits (96), Expect = 7e-05
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTG   GIG    R LA  G  + +  R            ++ +   +V     D++
Sbjct: 4   VALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALG-VEVIFFPADVA 62

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
            L++              ++ L+NNAG+
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGV 90

Length = 256

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 8e-05
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 11/94 (11%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ++  G   IVTG SSGIG    + L   G +V  A        D+      +        
Sbjct: 5   LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNA--------DIHGG---DGQHENYQF 53

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +  D+SS   V    ++   K   ++ L+NNAGI
Sbjct: 54  VPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGI 87

Length = 266

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G TA++TG +SGIG ET R     G  V +  R+ A+   ++ A  +        V+  D
Sbjct: 6   GKTALITGGTSGIGLETARQFLAEGARVAITGRDPAS---LEAA--RAELGESALVIRAD 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
              +A+ +  A         L+ +  NAG+
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGV 90

Length = 249

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
              G   +VTG S GIG    +     G  V ++ R   A  D  + +       +   +
Sbjct: 3   SVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSA---YGECIAI 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAG 117
             DLSS   +    +    +   L++L+NNAG
Sbjct: 60  PADLSSEEGIEALVARVAERSDRLDVLVNNAG 91

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 40.3 bits (94), Expect = 1e-04
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK--DAIVKEIPTAKV 82
            D +G  A+VTGAS GIG E  R+L  +G  V +       GT V+  +A+  E+   +V
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGL------HGTRVEKLEALAAEL-GERV 54

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +   +LS    V+            ++IL+NNAGI
Sbjct: 55  KIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGI 90

Length = 245

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 18/113 (15%)

Query: 31  TAIVTGASSGIGAETTRVLAL----RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLE 86
             ++TG SSGIG    R LA      G  V+   R        K   V+ +  A    ++
Sbjct: 3   VVLITGCSSGIG----RALADAFKAAGYEVWATAR--------KAEDVEALAAAGFTAVQ 50

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLS--KDNIELQFATN 137
           LD++  A++ + A +   +   L++LINNAG  A   +L    + +  QF TN
Sbjct: 51  LDVNDGAALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETN 103

Length = 274

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           A+VTG   GIG    + LA  G  V      N            +        V+E D+S
Sbjct: 3   ALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQE--QGALGFDFRVVEGDVS 60

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
           S  S +   +    +  P+++L+NNAGI
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGI 88

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 7/91 (7%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A++TG + GIG          G  V +    +    + +    KE+    V  ++ D
Sbjct: 7   GKVALITGGTRGIGRAIAEAFLREGAKVAV----LYNSAENE---AKELREKGVFTIKCD 59

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           + +   V+K       +   +++L+NNAGIM
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM 90

Length = 255

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 14/99 (14%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVD 83
           +  G TA+VTGA+SGIG E    LA  G  V +A        D  +A+  EI  A  K  
Sbjct: 4   NLNGKTAVVTGAASGIGKEIALELARAGAAVAIA----DLNQDGANAVADEINKAGGKAI 59

Query: 84  VLELDLSSL----ASVRKFASDFTTKGLPLNILINNAGI 118
            + +D+++     A + K A  F +    ++IL++NAGI
Sbjct: 60  GVAMDVTNEDAVNAGIDKVAERFGS----VDILVSNAGI 94

Length = 262

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 27/86 (31%), Positives = 45/86 (52%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           ++TGASSG+GA   R  A +G  + +  R      ++K  ++   P  KV V  LD++  
Sbjct: 6   LITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH 65

Query: 93  ASVRKFASDFTTKGLPLNILINNAGI 118
             V +  ++F  +   L+ +I NAGI
Sbjct: 66  DQVFEVFAEFRDELGGLDRVIVNAGI 91

Length = 248

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 5/86 (5%)

Query: 34  VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA 93
           +TGA+SGIG ET  + A  G  V +   +      +   +  E     V    LD++  A
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAE----NVVAGALDVTDRA 60

Query: 94  SVRKFASDFTTK-GLPLNILINNAGI 118
           +     +DF    G  L+ L NNAG+
Sbjct: 61  AWAAALADFAAATGGRLDALFNNAGV 86

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE------IPTAK 81
            G  A++T A+ GIG       A  G +V          TD+ +  +KE      I T  
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVI--------ATDINEEKLKELERGPGITTRV 52

Query: 82  VDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATN 137
           +DV + +      V   A +       +++L N AG +    +L  ++ +  FA N
Sbjct: 53  LDVTDKE-----QVAALAKEEGR----IDVLFNCAGFVHHGSILDCEDDDWDFAMN 99

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
             ++TGAS GIG  T  + A RG  V +   R+ AA  +  DA+       +  V+  D+
Sbjct: 4   VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAV--RAAGGRACVVAGDV 61

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMASPFM----LSKDNIELQFATNHLGS 141
           ++ A V        +    L+ L+NNAGI+A P M    +    +   F TN LG+
Sbjct: 62  ANEADVIAMFDAVQSAFGRLDALVNNAGIVA-PSMPLADMDAARLRRMFDTNVLGA 116

Length = 248

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 13/100 (13%)

Query: 29  GLTAIVTGAS--SGIGAETTRVLALRGVHVFMAV-----RNMAAGTDVKDAIV--KEIPT 79
              A+VTG S   GIGA   + LA  G  +F        + M  G D  + I   +E+  
Sbjct: 6   NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLK 65

Query: 80  AKVDV--LELDLSSLASVRKFASDFTTK-GLPLNILINNA 116
             V V  +ELDL+   + ++  +  T + G P +IL+NNA
Sbjct: 66  NGVKVSSMELDLTQNDAPKELLNKVTEQLGYP-HILVNNA 104

Length = 256

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 24/86 (27%), Positives = 41/86 (47%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           ++TG  SG+G  T   LA  G  + +   N       K A+++  P A+V +++ D+S  
Sbjct: 7   LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66

Query: 93  ASVRKFASDFTTKGLPLNILINNAGI 118
           A V  +      +   ++   NNAGI
Sbjct: 67  AQVEAYVDATVEQFGRIDGFFNNAGI 92

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 8/104 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  AIVTG ++G+G      LA  G  + +       GT+  D   + I     KV  +
Sbjct: 14  DGKVAIVTGGNTGLGQGYAVALAKAGADIIIT----THGTNW-DETRRLIEKEGRKVTFV 68

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAG-IMASPFMLSKD 128
           ++DL+   S  K   +   +   ++IL+NNAG I  +P +  KD
Sbjct: 69  QVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKD 112

Length = 258

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 8/100 (8%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA- 80
           T   D +G  A+VTGA++G+G      LA  G  V   V ++A+  D  D ++ EI  A 
Sbjct: 5   TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATV--VVNDVASALDASD-VLDEIRAAG 61

Query: 81  -KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGI 118
            K   +  D+S  A+  +  +  T  GL  L+I++NNAGI
Sbjct: 62  AKAVAVAGDISQRATADELVA--TAVGLGGLDIVVNNAGI 99

Length = 306

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 11/90 (12%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG + GIGA T   L   G  V    R+                   V+ +  
Sbjct: 8   AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP-----------EGVEFVAA 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAG 117
           DL++       A     +   ++IL++  G
Sbjct: 57  DLTTAEGCAAVARAVLERLGGVDILVHVLG 86

Length = 260

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 12/92 (13%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDVLELD 88
           A+VTGA  GIG    + L   G  V +   N        D + K+   A   K DV + D
Sbjct: 5   ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64

Query: 89  --LSSLASVRKFASDFTTKGLPLNILINNAGI 118
              +++  V     D        N+++NNAG+
Sbjct: 65  QVFAAVRQVVDTFGDL-------NVVVNNAGV 89

Length = 256

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D  G  A++TGAS+GIG          G  V +A R++ A   + D I       KV  +
Sbjct: 6   DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT--SGGKVVPV 63

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ 133
             D+S    V       T +   ++I + NAGI+    ML     E Q
Sbjct: 64  CCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQ 111

Length = 253

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 6/122 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLEL 87
           T ++TG   G+G    R LA RG   + +  R+         A++ E+    A+V V+  
Sbjct: 2   TYLITGGLGGLGRALARWLAERGARRLVLLSRS-GPDAPGAAALLAELEAAGARVTVVAC 60

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHLH 145
           D++   ++    +       PL  +I+ AG++       L+ +      A    G+ +LH
Sbjct: 61  DVADRDALAAVLAAIPAVEGPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNLH 120

Query: 146 ML 147
            L
Sbjct: 121 EL 122

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 2/86 (2%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           AIVTG ++GIG      LA  G  V +A         V  AI +     +   LE +++S
Sbjct: 2   AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQA--GGQAIGLECNVTS 59

Query: 92  LASVRKFASDFTTKGLPLNILINNAG 117
              +        ++   + IL+NNAG
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAG 85

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           IVTG S GIG    R     G  V    R  AAG  ++  + +  P +   V   D++  
Sbjct: 13  IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP-CDVTKE 71

Query: 93  ASVRKFASDFTTKGLPLNILINNAG 117
             ++   S    +   ++ L+NNAG
Sbjct: 72  EDIKTLISVTVERFGRIDCLVNNAG 96

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 39.3 bits (92), Expect = 3e-04
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD-VKDAIVKEIPTAKVDVLELDLS 90
           A +TGA+ G+G    R +A +G  VF+   N AAG D     I              D++
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
             A  +   +        L++L+NNAG+
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGV 89

Length = 251

>gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 25/91 (27%), Positives = 37/91 (40%), Gaps = 11/91 (12%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           AIVTG S G+GA     L   G+ V    R+       +   +      ++  +ELDLS 
Sbjct: 4   AIVTGHSRGLGAALAEQLLQPGIAVLGVARS-------RHPSLAAAAGERLAEVELDLSD 56

Query: 92  LASVRKFASDFTTKGLPLN----ILINNAGI 118
            A+   + +              +LINNAG 
Sbjct: 57  AAAAAAWLAGDLLAAFVDGASRVLLINNAGT 87

Length = 243

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 26/115 (22%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T ++TGA+SGIGA T  +L   G  V         G D+++A V             DLS
Sbjct: 1   TIVITGAASGIGAATAELLEDAGHTVI--------GIDLREADVIA-----------DLS 41

Query: 91  SLASVRKFASDFTTK-GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           +        +D   +    L+ L+N AG+  +          L    N+ G   L
Sbjct: 42  TPEGRAAAIADVLARCSGVLDGLVNCAGVGGTT------VAGLVLKVNYFGLRAL 90

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 12/125 (9%)

Query: 4   FNRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM 63
           +   GP+     S A+  +   ++      +TG + GIG       A  G  + +  R+ 
Sbjct: 250 YGGSGPA-----STAQAPSPLAES-PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA 303

Query: 64  AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPF 123
                + +A+  E  + + D+     +  A+V    +    +   L++L+NNAG +A  F
Sbjct: 304 EGAKKLAEALGDEHLSVQADI-----TDEAAVESAFAQIQARWGRLDVLVNNAG-IAEVF 357

Query: 124 MLSKD 128
             S +
Sbjct: 358 KPSLE 362

Length = 520

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            I+TG S G+G      L  +G HV    R      + +   + E   + +    LDL  
Sbjct: 4   VIITGTSQGLGEAIANQLLEKGTHVISISR----TENKELTKLAEQYNSNLTFHSLDLQD 59

Query: 92  LASV----RKFASDFTTKGLPLNILINNAGIMA 120
           +  +     +  S      +    LINNAG++A
Sbjct: 60  VHELETNFNEILSSIQEDNVSSIHLINNAGMVA 92

Length = 251

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 38.3 bits (89), Expect = 4e-04
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSS 91
           +VTGAS GIG E     A  G  V +  RN      V D I +E     +  +L+L   +
Sbjct: 8   LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILDLLTCT 67

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDN 129
             + ++ A         L+ +++NAG++     LS+ N
Sbjct: 68  SENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQN 105

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 38.4 bits (89), Expect = 5e-04
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G TA++TG++ GIG    +     G  V +A  N+ A      A   EI  A    + LD
Sbjct: 3   GKTALITGSARGIGRAFAQAYVREGARVAIADINLEAA----RATAAEIGPAAC-AISLD 57

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHL 144
           ++  AS+ +  +    +   ++IL+NNA +  +A    +++++ +  FA N  G+L +
Sbjct: 58  VTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFM 115

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 38.4 bits (90), Expect = 5e-04
 Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G   +VTGA+ GIGAE  R L  RG  + +     A    +   +  +    +V  +  D
Sbjct: 9   GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGD---DRVLTVVAD 65

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++ LA+++  A +   +   +++++ NAGI
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGI 95

Length = 296

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 11/115 (9%)

Query: 9   PSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD 68
            S  ++S P++ +       G  A+VTG ++GIG    R+    G  V +       G +
Sbjct: 4   ASSSASSLPSQRLL------GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQN 57

Query: 69  VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMASP 122
           V D++  E     V     D++    V + A DFT      L+I++NNAG+   P
Sbjct: 58  VCDSLGGE---PNVCFFHCDVTVEDDVSR-AVDFTVDKFGTLDIMVNNAGLTGPP 108

Length = 280

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 38.5 bits (90), Expect = 5e-04
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 4/105 (3%)

Query: 17  PAEEVTQGIDATGLTA--IVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAI 73
           PA  +       GL    ++TG   G+G    R LA RG  H+ +  R   A      A 
Sbjct: 136 PAAALELAAAPGGLDGTYLITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAA 195

Query: 74  VKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +     A+V V+  D++  A++    ++    G PL  +I+ AG+
Sbjct: 196 LLRAGGARVSVVRCDVTDPAALAALLAEL-AAGGPLAGVIHAAGV 239

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 14/94 (14%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD------AIVKEIPTAKVDVLE 86
           ++TGASSGIG  T    A RG  + +A R+  A   V +      A V  +PT       
Sbjct: 11  VITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPT------- 63

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
            D++    V+  A+   + G  +++ +NN G+ A
Sbjct: 64  -DVTDADQVKALATQAASFGGRIDVWVNNVGVGA 96

Length = 330

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TA++ GAS G+G      L  RG  V   VR        +D  ++ +P   ++ L+++  
Sbjct: 3   TALIIGASRGLGLGLVDRLLERGWQVTATVRGPQ-----QDTALQALPGVHIEKLDMN-- 55

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM 119
             AS+ +       +G   ++L  NAGI 
Sbjct: 56  DPASLDQLLQRL--QGQRFDLLFVNAGIS 82

Length = 225

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGA+ GIG       A  G  V +  R     +++   +  E+  A  + L L
Sbjct: 7   AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDR-----SELVHEVAAELRAAGGEALAL 61

Query: 88  --DLSSLASVRKFASDFTTKGLPLNILINNAG--IMASPF 123
             DL + A  +   +        +++LINN G  I A PF
Sbjct: 62  TADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPF 101

Length = 260

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 37.6 bits (88), Expect = 0.001
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           ++TG  SG G    + L   G  V         G   K+  ++ + + ++  L+LD++  
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTVLAGC-LTKNGPGAKE--LRRVCSDRLRTLQLDVTKP 60

Query: 93  ASVRKFASDFTTKGLP---LNILINNAGIMASP---FMLSKDNIELQFATNHLGSLH--L 144
             +++ A+ +  + +    L  L+NNAGI+       +L  D+       N  G++    
Sbjct: 61  EQIKR-AAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFGTVEVTK 119

Query: 145 HML 147
             L
Sbjct: 120 AFL 122

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 37.3 bits (87), Expect = 0.001
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 7/94 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVL- 85
            G  A+VTG + G+GA   R  A RG    +   RN   G    +A   E+       + 
Sbjct: 5   DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG----EAQAAELEALGAKAVF 60

Query: 86  -ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            + DLS +   R+  +        L+ L+N AG+
Sbjct: 61  VQADLSDVEDCRRVVAAADEAFGRLDALVNAAGL 94

Length = 260

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 6/93 (6%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            +VTGA+ GIG    +  A  G  V +A RN+    +  D++  +        L +D+S 
Sbjct: 8   VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHA-----LAMDVSD 62

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
            A +R+       +   +++L+NNAG+   P M
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNAGV-TDPTM 94

Length = 520

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 11/98 (11%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT-DVKDAIVK---EIPTAK 81
           D  G   ++TG S+G+G             V +  R+      DV + I K   E    K
Sbjct: 4   DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVK 63

Query: 82  VDV-LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            DV +E D+ +L  ++    +F T    L+++INNAGI
Sbjct: 64  GDVTVESDVVNL--IQTAVKEFGT----LDVMINNAGI 95

Length = 261

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 34/99 (34%), Positives = 48/99 (48%), Gaps = 13/99 (13%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPT--AKVDVL 85
           G  A+VTGAS GIG      LA  G  V +   RN  A     D  ++EI +   K  ++
Sbjct: 6   GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA----DETIREIESNGGKAFLI 61

Query: 86  ELDLSSLASVRKFASDFTTK------GLPLNILINNAGI 118
           E DL+S+  V+K       +         ++IL+NNAGI
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI 100

Length = 254

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 36.5 bits (85), Expect = 0.002
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 19/95 (20%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           +    T ++TGA+SGIG    R    +G  V+        G D +D   K   +     L
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVY--------GVDKQD---KPDLSGNFHFL 50

Query: 86  ELDLSS-LASVRKFASDFTTKGLPLNILINNAGIM 119
           +LDLS  L  +  +           +IL N AGI+
Sbjct: 51  QLDLSDDLEPLFDWVPSV-------DILCNTAGIL 78

Length = 235

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 36.1 bits (83), Expect = 0.003
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIV 74
          +  T +VTGAS G+G +  +  A  G  V +  R+      V DAIV
Sbjct: 5  SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIV 51

Length = 239

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 36.2 bits (84), Expect = 0.003
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             I+TG SSG+G    +  A  G +V +  R      + K  I  E    +V  +++D+ 
Sbjct: 3   VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEI--EQFPGQVLTVQMDVR 60

Query: 91  SLASVRKFASDFTTKGLPLNILINNA 116
           +   V+K       K   ++ LINNA
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNA 86

Length = 252

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 36.0 bits (83), Expect = 0.003
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 1/101 (0%)

Query: 24  GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD 83
            ID +G  A  T +S GIG    RVLA  G  V +  RN       ++ I K      V 
Sbjct: 3   KIDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKI-KSESNVDVS 61

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
            +  DL+    + +   +    G P     +  G     FM
Sbjct: 62  YIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKPGYFM 102

Length = 263

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 35.8 bits (83), Expect = 0.003
 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 1/87 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A V GA  G+GA   R  A  G  V +A R  A    +   I+++   +   V   D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAV-PTDAR 59

Query: 91  SLASVRKFASDFTTKGLPLNILINNAG 117
               V         +  PL +L+ NAG
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAG 86

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +VTGAS G+GA   R  A  G  V   V N    T+  +A+  E    +   ++ D+ 
Sbjct: 2   VVLVTGASRGLGAAIARSFAREGARV---VVNYYRSTESAEAVAAEA-GERAIAIQADVR 57

Query: 91  SLASVRKFASDFTTKGLPLNILINNA 116
               V+    +      P++ ++NNA
Sbjct: 58  DRDQVQAMIEEAKNHFGPVDTIVNNA 83

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score = 35.6 bits (82), Expect = 0.004
 Identities = 23/92 (25%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  AIVTG   GIG +        G  V  A  +   G D  +A    +     DV +  
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEGPNLFFVHGDVADET 60

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           L     V             +++L+NNA   +
Sbjct: 61  LVKF-VVYAMLEKLGR----IDVLVNNAARGS 87

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.95
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.95
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.94
KOG1208	314	consensus Dehydrogenases with different specificit	99.93
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.93
PRK05854	313	short chain dehydrogenase; Provisional	99.93
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK07062	265	short chain dehydrogenase; Provisional	99.91
PRK07478	254	short chain dehydrogenase; Provisional	99.91
KOG0725	270	consensus Reductases with broad range of substrate	99.91
PRK05876	275	short chain dehydrogenase; Provisional	99.91
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK08339	263	short chain dehydrogenase; Provisional	99.91
PRK05867	253	short chain dehydrogenase; Provisional	99.91
PRK07063	260	short chain dehydrogenase; Provisional	99.91
PRK06139	330	short chain dehydrogenase; Provisional	99.91
PRK08303	305	short chain dehydrogenase; Provisional	99.91
PRK07791	286	short chain dehydrogenase; Provisional	99.9
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.9
PRK06197	306	short chain dehydrogenase; Provisional	99.9
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.9
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.9
PRK08589	272	short chain dehydrogenase; Validated	99.9
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK06114	254	short chain dehydrogenase; Provisional	99.9
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.9
PRK08862	227	short chain dehydrogenase; Provisional	99.9
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.9
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.89
PRK05872	296	short chain dehydrogenase; Provisional	99.89
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK07109	334	short chain dehydrogenase; Provisional	99.89
PRK09242	257	tropinone reductase; Provisional	99.89
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.89
PRK08265	261	short chain dehydrogenase; Provisional	99.89
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.89
PLN02253	280	xanthoxin dehydrogenase	99.89
PRK06194	287	hypothetical protein; Provisional	99.89
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.89
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.89
PRK06196	315	oxidoreductase; Provisional	99.89
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.88
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.88
PRK05717	255	oxidoreductase; Validated	99.88
PRK08278	273	short chain dehydrogenase; Provisional	99.88
PRK06128	300	oxidoreductase; Provisional	99.88
PRK06172	253	short chain dehydrogenase; Provisional	99.88
PRK07035	252	short chain dehydrogenase; Provisional	99.88
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.88
PRK07890	258	short chain dehydrogenase; Provisional	99.88
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.88
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.88
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.88
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.88
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.88
PRK07677	252	short chain dehydrogenase; Provisional	99.88
PRK09186	256	flagellin modification protein A; Provisional	99.87
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.87
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.87
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.87
PRK07576	264	short chain dehydrogenase; Provisional	99.87
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.87
PRK08643	256	acetoin reductase; Validated	99.87
PRK05866	293	short chain dehydrogenase; Provisional	99.87
PRK06398	258	aldose dehydrogenase; Validated	99.87
PRK08628	258	short chain dehydrogenase; Provisional	99.87
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.87
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.87
PRK07814	263	short chain dehydrogenase; Provisional	99.87
PRK07831	262	short chain dehydrogenase; Provisional	99.87
PRK07067	257	sorbitol dehydrogenase; Provisional	99.87
PRK07985	294	oxidoreductase; Provisional	99.87
PRK07774	250	short chain dehydrogenase; Provisional	99.87
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.87
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.87
PRK08251	248	short chain dehydrogenase; Provisional	99.86
PRK06484	520	short chain dehydrogenase; Validated	99.86
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.86
PRK07825	273	short chain dehydrogenase; Provisional	99.86
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.86
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.86
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK06701	290	short chain dehydrogenase; Provisional	99.86
PRK09134	258	short chain dehydrogenase; Provisional	99.86
PRK06138	252	short chain dehydrogenase; Provisional	99.86
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.86
PRK07856	252	short chain dehydrogenase; Provisional	99.86
PRK08226	263	short chain dehydrogenase; Provisional	99.86
PRK12747	252	short chain dehydrogenase; Provisional	99.86
PRK05855	582	short chain dehydrogenase; Validated	99.86
PRK06500	249	short chain dehydrogenase; Provisional	99.85
PRK12939	250	short chain dehydrogenase; Provisional	99.85
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.85
PRK06484	520	short chain dehydrogenase; Validated	99.85
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PLN00015	308	protochlorophyllide reductase	99.85
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK06125	259	short chain dehydrogenase; Provisional	99.85
PRK07024	257	short chain dehydrogenase; Provisional	99.85
PRK12743	256	oxidoreductase; Provisional	99.85
PLN02780	320	ketoreductase/ oxidoreductase	99.85
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.85
PRK12744	257	short chain dehydrogenase; Provisional	99.85
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.85
PRK06949	258	short chain dehydrogenase; Provisional	99.85
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.85
PRK06180	277	short chain dehydrogenase; Provisional	99.85
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.85
PRK06523	260	short chain dehydrogenase; Provisional	99.85
PRK05599	246	hypothetical protein; Provisional	99.84
PRK06483	236	dihydromonapterin reductase; Provisional	99.84
PRK09072	263	short chain dehydrogenase; Provisional	99.84
PRK05650	270	short chain dehydrogenase; Provisional	99.84
PRK07454	241	short chain dehydrogenase; Provisional	99.84
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.84
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.84
PRK08263	275	short chain dehydrogenase; Provisional	99.84
PRK05875	276	short chain dehydrogenase; Provisional	99.84
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.84
PRK12937	245	short chain dehydrogenase; Provisional	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.84
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.84
PRK06914	280	short chain dehydrogenase; Provisional	99.84
PRK06182	273	short chain dehydrogenase; Validated	99.84
PRK06841	255	short chain dehydrogenase; Provisional	99.84
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.84
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.84
PRK07832	272	short chain dehydrogenase; Provisional	99.84
PRK06198	260	short chain dehydrogenase; Provisional	99.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.83
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08703	239	short chain dehydrogenase; Provisional	99.83
PRK08267	260	short chain dehydrogenase; Provisional	99.83
PRK06123	248	short chain dehydrogenase; Provisional	99.83
PRK12746	254	short chain dehydrogenase; Provisional	99.83
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.83
PRK06940	275	short chain dehydrogenase; Provisional	99.83
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.83
PRK07775	274	short chain dehydrogenase; Provisional	99.83
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
PRK07904	253	short chain dehydrogenase; Provisional	99.83
PRK06179	270	short chain dehydrogenase; Provisional	99.83
COG1028	251	FabG Dehydrogenases with different specificities (	99.82
PRK10538	248	malonic semialdehyde reductase; Provisional	99.82
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.82
PRK07326	237	short chain dehydrogenase; Provisional	99.82
PRK05993	277	short chain dehydrogenase; Provisional	99.82
PRK06482	276	short chain dehydrogenase; Provisional	99.82
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK09135	249	pteridine reductase; Provisional	99.82
PRK06057	255	short chain dehydrogenase; Provisional	99.82
PRK06181	263	short chain dehydrogenase; Provisional	99.82
PRK07069	251	short chain dehydrogenase; Validated	99.82
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.81
PRK12827	249	short chain dehydrogenase; Provisional	99.81
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.81
PRK12828	239	short chain dehydrogenase; Provisional	99.81
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.81
PRK07201	657	short chain dehydrogenase; Provisional	99.81
PRK05693	274	short chain dehydrogenase; Provisional	99.81
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.81
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.81
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.81
PRK07074	257	short chain dehydrogenase; Provisional	99.8
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.8
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.8
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.8
PRK12829	264	short chain dehydrogenase; Provisional	99.8
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.79
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.79
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.79
PRK12367	245	short chain dehydrogenase; Provisional	99.79
PRK07806	248	short chain dehydrogenase; Provisional	99.79
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.78
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.78
PRK07102	243	short chain dehydrogenase; Provisional	99.78
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.78
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.78
PRK12742	237	oxidoreductase; Provisional	99.77
PRK08324	681	short chain dehydrogenase; Validated	99.77
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.77
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.76
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.75
PRK07060	245	short chain dehydrogenase; Provisional	99.75
PRK06101	240	short chain dehydrogenase; Provisional	99.75
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.75
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.75
PRK09291	257	short chain dehydrogenase; Provisional	99.75
PRK08177	225	short chain dehydrogenase; Provisional	99.75
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.75
PRK06924	251	short chain dehydrogenase; Provisional	99.75
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.75
PRK05884	223	short chain dehydrogenase; Provisional	99.74
PRK07041	230	short chain dehydrogenase; Provisional	99.74
PRK08264	238	short chain dehydrogenase; Validated	99.74
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.73
PRK07023	243	short chain dehydrogenase; Provisional	99.73
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.73
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.72
PRK07577	234	short chain dehydrogenase; Provisional	99.72
PRK06953	222	short chain dehydrogenase; Provisional	99.71
PRK08017	256	oxidoreductase; Provisional	99.69
PRK07578	199	short chain dehydrogenase; Provisional	99.68
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.67
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.65
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.65
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.64
PRK08219	227	short chain dehydrogenase; Provisional	99.64
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.63
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.61
PLN02653	340	GDP-mannose 4,6-dehydratase	99.6
PLN02572	442	UDP-sulfoquinovose synthase	99.59
PLN02240	352	UDP-glucose 4-epimerase	99.57
PLN03209	576	translocon at the inner envelope of chloroplast su	99.57
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.55
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.54
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.54
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.54
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.5
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.5
PLN02214	342	cinnamoyl-CoA reductase	99.49
PLN02650	351	dihydroflavonol-4-reductase	99.49
PLN00198	338	anthocyanidin reductase; Provisional	99.47
PLN02583	297	cinnamoyl-CoA reductase	99.46
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.45
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.43
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.41
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.39
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.37
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.35
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.34
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.33
PLN02427	386	UDP-apiose/xylose synthase	99.33
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.32
PRK08309	177	short chain dehydrogenase; Provisional	99.31
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.31
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.28
PLN02686	367	cinnamoyl-CoA reductase	99.27
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.26
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.26
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.25
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.22
PLN02260	668	probable rhamnose biosynthetic enzyme	99.2
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.2
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.18
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.18
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.16
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.14
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.13
CHL00194	317	ycf39 Ycf39; Provisional	99.12
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.12
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.11
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.11
PLN02206	442	UDP-glucuronate decarboxylase	99.1
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.09
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	99.08
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.06
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.06
PLN02996	491	fatty acyl-CoA reductase	99.06
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.05
PLN02778	298	3,5-epimerase/4-reductase	99.05
PRK05865	854	hypothetical protein; Provisional	99.04
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.04
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.04
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.02
PRK12548	289	shikimate 5-dehydrogenase; Provisional	99.02
PLN02503	605	fatty acyl-CoA reductase 2	99.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.95
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.93
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	98.92
PRK07201	657	short chain dehydrogenase; Provisional	98.91
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.9
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.84
PLN02260	668	probable rhamnose biosynthetic enzyme	98.83
PRK12320	699	hypothetical protein; Provisional	98.75
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.73
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	98.73
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.69
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.59
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.54
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.52
PRK09620	229	hypothetical protein; Provisional	98.51
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.47
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.45
PLN00016	378	RNA-binding protein; Provisional	98.44
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	98.44
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.4
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.37
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.34
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.34
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.33
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.29
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.26
PRK14982	340	acyl-ACP reductase; Provisional	98.26
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.25
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.07
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.03
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.99
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.96
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.95
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.91
COG2910	211	Putative NADH-flavin reductase [General function p	97.89
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.88
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.8
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.78
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.75
PTZ00325	321	malate dehydrogenase; Provisional	97.75
PRK06849	389	hypothetical protein; Provisional	97.75
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.74
PLN00106	323	malate dehydrogenase	97.74
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.73
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.71
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.7
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.69
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.66
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.64
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.64
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	97.63
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.61
COG3268	382	Uncharacterized conserved protein [Function unknow	97.59
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.59
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.58
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.57
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.57
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.56
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.52
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.5
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.5
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.49
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.49
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	97.48
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.45
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.44
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.44
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	97.43
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	97.43
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.43
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.43
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.41
PRK08328	231	hypothetical protein; Provisional	97.41
PRK08223	287	hypothetical protein; Validated	97.41
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.39
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.39
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.36
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.35
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.34
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	97.34
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.34
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.34
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.31
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.31
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.29
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.29
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.29
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.28
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.27
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.26
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.23
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.2
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.19
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.18
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	97.17
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	97.15
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	97.14
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.13
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.12
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.11
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	97.11
PRK09496	453	trkA potassium transporter peripheral membrane com	97.1
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	97.09
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	97.06
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.02
PRK14851	679	hypothetical protein; Provisional	97.0
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	96.99
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.98
PRK07411	390	hypothetical protein; Validated	96.96
PLN00203	519	glutamyl-tRNA reductase	96.95
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.89
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.89
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.88
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.87
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.86
PRK05086	312	malate dehydrogenase; Provisional	96.86
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	96.85
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.83
PRK04148	134	hypothetical protein; Provisional	96.83
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.82
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.8
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.79
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.77
PRK13243	333	glyoxylate reductase; Reviewed	96.76
PRK07877	722	hypothetical protein; Provisional	96.73
PRK12480	330	D-lactate dehydrogenase; Provisional	96.72
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.7
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.69
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.69
TIGR01381	664	E1_like_apg7 E1-like protein-activating enzyme Gsa	96.69
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	96.67
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.65
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.64
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.64
PLN02740	381	Alcohol dehydrogenase-like	96.63
PRK08655	437	prephenate dehydrogenase; Provisional	96.63
PRK14852	989	hypothetical protein; Provisional	96.63
PRK06487	317	glycerate dehydrogenase; Provisional	96.62
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	96.6
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.6
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.58
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.58
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.56
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.56
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.55
cd01488	291	Uba3_RUB Ubiquitin activating enzyme (E1) subunit	96.53
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.52
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.52
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.52
PRK09496	453	trkA potassium transporter peripheral membrane com	96.48
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	96.47
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	96.46
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.46
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	96.45
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.44
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.43
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.42
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	96.41
PLN02928	347	oxidoreductase family protein	96.39
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.38
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.38
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.37
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	96.37
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	96.34
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	96.33
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.33
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.32
PTZ00354	334	alcohol dehydrogenase; Provisional	96.3
cd01491	286	Ube1_repeat1 Ubiquitin activating enzyme (E1), rep	96.25
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	96.25
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.25
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.24
PLN03139	386	formate dehydrogenase; Provisional	96.23
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.23
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	96.23
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	96.21
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.18
PRK13403	335	ketol-acid reductoisomerase; Provisional	96.17
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.17
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.14
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	96.14
PLN02827	378	Alcohol dehydrogenase-like	96.12
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.12
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.11
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	96.1
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.1
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.1
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.06
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.06
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.06
PLN02602	350	lactate dehydrogenase	96.05
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	96.05
PRK13771	334	putative alcohol dehydrogenase; Provisional	96.04
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.02
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.01
PRK07574	385	formate dehydrogenase; Provisional	95.99
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	95.96
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.95
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	95.94
PRK05479	330	ketol-acid reductoisomerase; Provisional	95.93
PTZ00117	319	malate dehydrogenase; Provisional	95.93
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.92
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	95.92
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	95.9
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	95.89
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	95.88
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	95.87
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.86
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.85
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	95.81
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	95.8
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.8
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	95.8
PRK10669	558	putative cation:proton antiport protein; Provision	95.8
COG5322	351	Predicted dehydrogenase [General function predicti	95.79
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.79
KOG2013	603	consensus SMT3/SUMO-activating complex, catalytic	95.78
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.77
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	95.76
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.95  E-value=1.6e-27  Score=167.72  Aligned_cols=117  Identities=31%  Similarity=0.332  Sum_probs=107.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||+++|||.++|++|+++|++|++++|..++++++.+++.+    .++.....|++|.+++.++++.+.++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~----~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA----GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc----CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999888888888743    57899999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+++|+||||||...  +..+.+.++|++++++|+.|.++.++
T Consensus        79 ~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~  121 (246)
T COG4221          79 FGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTR  121 (246)
T ss_pred             hCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999863  44578999999999999999999876

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=1.3e-27  Score=173.00  Aligned_cols=124  Identities=30%  Similarity=0.306  Sum_probs=112.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +..+.||+++|||+|+|||+++|++|++.|++++++.|....++...+++++..+..+++.++||++|.+++.++++.+.
T Consensus         7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~   86 (282)
T KOG1205|consen    7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI   86 (282)
T ss_pred             HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999999899998999888754469999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhccC
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHML  147 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~  147 (147)
                      .++|++|+||||||+..  .....+.+++..+|++|++|+++++|+
T Consensus        87 ~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~  132 (282)
T KOG1205|consen   87 RHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKA  132 (282)
T ss_pred             HhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHH
Confidence            99999999999999875  233678899999999999999999873

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.94  E-value=1.3e-26  Score=166.70  Aligned_cols=120  Identities=31%  Similarity=0.447  Sum_probs=112.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|||+|+|||+++|+.|+++|++|+++.|+.++++++.+++...+ +.++.++.+|+++++++.++.+++..+
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~-~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKT-GVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhh-CceEEEEECcCCChhHHHHHHHHHHhc
Confidence            4678999999999999999999999999999999999999999999999876 679999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.||+||||||+..  +..+.+.++.++++++|+.++..|++
T Consensus        82 ~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~  124 (265)
T COG0300          82 GGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTK  124 (265)
T ss_pred             CCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864  55689999999999999999999876

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=1.4e-25  Score=165.84  Aligned_cols=130  Identities=58%  Similarity=0.830  Sum_probs=118.8

Q ss_pred             CcccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           18 AEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        18 ~~~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ........++.+++++|||+++|||.++|+.|+.+|++|++.+|+.+..+++.+.+.+..+..++.++.+|++|.++|.+
T Consensus        24 ~~~~~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~  103 (314)
T KOG1208|consen   24 ALEVTHGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRK  103 (314)
T ss_pred             cceeeccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHH
Confidence            33344556789999999999999999999999999999999999998899999999886667889999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhccC
Q 044688           98 FASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML  147 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  147 (147)
                      +.+++.++++++|++|||||++.+....+.|.++..|.+|+.|+|+|+++
T Consensus       104 fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~l  153 (314)
T KOG1208|consen  104 FAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTEL  153 (314)
T ss_pred             HHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHH
Confidence            99999999999999999999998777888899999999999999999863

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.93  E-value=9e-25  Score=157.56  Aligned_cols=121  Identities=21%  Similarity=0.299  Sum_probs=112.0

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +..+..|+++|||||++|+|+++|.++++.|+.+++++.|.+..++..+++++.   ++++.+.||+++.+++.+..+++
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~---g~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI---GEAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc---CceeEEEecCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999999999999988876   38999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++..|.+|+||||||+..  +..+.+.+++++.+++|+.|+|..+|
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~k  154 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTK  154 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999874  45589999999999999999998765

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.1e-25  Score=162.98  Aligned_cols=122  Identities=45%  Similarity=0.670  Sum_probs=109.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|+++|||+++|||+++|++|+++|++|++++|+.++.++..+++.+..++.++.++.+|++|.+++.++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888888887765556789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+.... .+.+.++++..+++|+.|++++++
T Consensus        90 ~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~  132 (313)
T PRK05854         90 EGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTA  132 (313)
T ss_pred             hCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHH
Confidence            999999999999986533 357889999999999999998875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.1e-23  Score=152.69  Aligned_cols=122  Identities=13%  Similarity=0.165  Sum_probs=100.8

Q ss_pred             ccCCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ++.+.+++|+++|||++  +|||+++|++|+++|++|++++|+.+. .+..+++.+..  ..+.++.||++|++++.+++
T Consensus         3 ~~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          3 QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKA-RPYVEPLAEEL--DAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             CcccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHHHhh--ccceEEecCcCCHHHHHHHH
Confidence            44566899999999998  599999999999999999999998543 22233443332  23567899999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.+++|++|++|||||+..      +..+.+.++|++.|++|+.|++++++
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  132 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMAR  132 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999999753      23467889999999999999999876

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.6e-23  Score=151.96  Aligned_cols=122  Identities=24%  Similarity=0.273  Sum_probs=108.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.++.++..+++....++.++..+.+|++|++++.++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888777777777665556888999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...  +..+.+.++|++.+++|+.+++++++
T Consensus        84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  127 (265)
T PRK07062         84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTR  127 (265)
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753  34467889999999999999998765

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=151.45  Aligned_cols=120  Identities=26%  Similarity=0.273  Sum_probs=106.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||+++|||.+++++|+++|++|++++|++++.+++.+++...  +.++.++.+|+++++++.++++++.+
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE--GGEAVALAGDVRDEAYAKALVALAVE   79 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3578899999999999999999999999999999999988777777777655  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||+..   +..+.+.+++++.+++|+.+++++++
T Consensus        80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  124 (254)
T PRK07478         80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAK  124 (254)
T ss_pred             hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753   33467889999999999999998765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.91  E-value=2.1e-23  Score=152.00  Aligned_cols=120  Identities=31%  Similarity=0.300  Sum_probs=106.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +..+.+|+++|||+++|||+++|++|++.|++|++++|+.+..++...++..... +.++..+.||+++++++.++++..
T Consensus         3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~   82 (270)
T KOG0725|consen    3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA   82 (270)
T ss_pred             CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999988888877765432 457999999999999999999999


Q ss_pred             Hhc-CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhh
Q 044688          103 TTK-GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLH  143 (147)
Q Consensus       103 ~~~-~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~  143 (147)
                      .++ +|++|++|||||...   +..+.++++|+.+|++|+.|.++
T Consensus        83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~  127 (270)
T KOG0725|consen   83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAF  127 (270)
T ss_pred             HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHH
Confidence            998 799999999999875   34689999999999999996443

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-23  Score=152.34  Aligned_cols=119  Identities=22%  Similarity=0.272  Sum_probs=106.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++|.+++.++++++.++
T Consensus         3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE--GFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777777777654  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  123 (275)
T PRK05876         81 LGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE  123 (275)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999753  34578899999999999999998765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=1.6e-23  Score=151.32  Aligned_cols=116  Identities=13%  Similarity=0.123  Sum_probs=98.6

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+++|||++  +|||+++|++|+++|++|++++|+. ...+..+++.    +.++.++.+|++|++++.++++++.
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~~   78 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV----DEEDLLVECDVASDESIERAFATIK   78 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc----cCceeEEeCCCCCHHHHHHHHHHHH
Confidence            4789999999999  8999999999999999999999973 3333333332    3467889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+..      +..+.+.++|++.+++|+.+++++++
T Consensus        79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~  127 (252)
T PRK06079         79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAK  127 (252)
T ss_pred             HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHH
Confidence            99999999999999753      33468899999999999999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.4e-23  Score=151.26  Aligned_cols=120  Identities=23%  Similarity=0.230  Sum_probs=104.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|++++.++++++. 
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~~-   81 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSES-NVDVSYIVADLTKREDLERTVKELK-   81 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHHHH-
Confidence            34789999999999999999999999999999999999877777777765542 4578899999999999999999985 


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        82 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T PRK08339         82 NIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTR  125 (263)
T ss_pred             hhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            5899999999999753  34478999999999999999999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.9e-23  Score=150.73  Aligned_cols=120  Identities=26%  Similarity=0.305  Sum_probs=106.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++.+++...  +.++..+.+|++|++++.++++++.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS--GGKVVPVCCDVSQHQQVTSMLDQVTA   82 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999988777777777654  46788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...  +..+.+.++|++.+++|+.+++++++
T Consensus        83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (253)
T PRK05867         83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQ  126 (253)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHH
Confidence            9999999999999753  33467889999999999999999875

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-23  Score=150.04  Aligned_cols=121  Identities=30%  Similarity=0.394  Sum_probs=107.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++.....+.++.++.+|++|++++.++++++.++
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999998877777777765333567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  +..+.+.++|++.+++|+.+++++++
T Consensus        84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (260)
T PRK07063         84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCR  126 (260)
T ss_pred             hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999753  33467889999999999999999875

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.5e-23  Score=155.69  Aligned_cols=121  Identities=26%  Similarity=0.301  Sum_probs=108.0

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +..+.+|+++|||+++|||++++++|+++|++|++++|+.+.++++.+++++.  +.++.++.+|++|.+++.++++++.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~~~~   79 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL--GAEVLVVPTDVTDADQVKALATQAA   79 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999988888887777664  5688899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++|||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~  124 (330)
T PRK06139         80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAH  124 (330)
T ss_pred             HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            98999999999999763  34578889999999999999998765

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-23  Score=154.12  Aligned_cols=121  Identities=18%  Similarity=0.161  Sum_probs=101.9

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC----------ccchHHHHHHHhhCCCCeeEEEEecCCCHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM----------AAGTDVKDAIVKEIPTAKVDVLELDLSSLA   93 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~   93 (147)
                      +..+++|+++|||+++|||+++|++|+++|++|++++|+.          +..+++.+.+...  +.++.++.+|++|++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~   80 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA--GGRGIAVQVDHLVPE   80 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc--CCceEEEEcCCCCHH
Confidence            3458899999999999999999999999999999999974          2344455555443  457888999999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcc-ccC------CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           94 SVRKFASDFTTKGLPLNILINNA-GIM------ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~a-g~~------~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++++.+++|++|++|||| |..      .+..+.+.++|++.+++|+.+++++++
T Consensus        81 ~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  140 (305)
T PRK08303         81 QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH  140 (305)
T ss_pred             HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999999999 742      233467789999999999999999875

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.7e-23  Score=152.01  Aligned_cols=119  Identities=24%  Similarity=0.262  Sum_probs=104.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC---------ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM---------AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      .+++|+++|||+++|||.++|++|+++|++|++++++.         +..+++.+++...  +.++.++.+|++|++++.
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~   80 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA--GGEAVANGDDIADWDGAA   80 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc--CCceEEEeCCCCCHHHHH
Confidence            47899999999999999999999999999999998875         4555666666554  567889999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           97 KFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        97 ~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++.+++|++|++|||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        81 ~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (286)
T PRK07791         81 NLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLR  132 (286)
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            999999999999999999999864  34478899999999999999999875

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3.6e-23  Score=151.27  Aligned_cols=118  Identities=15%  Similarity=0.215  Sum_probs=98.4

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+++|||++  +|||+++|++|+++|++|++++|+.+ ..+..+++.+.. +.. .++.+|++|.+++.++++++.
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~-~~~-~~~~~Dv~d~~~v~~~~~~i~   78 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQEL-GSD-YVYELDVSKPEHFKSLAESLK   78 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhc-CCc-eEEEecCCCHHHHHHHHHHHH
Confidence            4679999999997  89999999999999999999999842 223334443332 233 578999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+..      +..+.+.++|++++++|+.|++++++
T Consensus        79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (274)
T PRK08415         79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTR  127 (274)
T ss_pred             HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHH
Confidence            99999999999999752      34478899999999999999999876

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.90  E-value=3.4e-23  Score=150.06  Aligned_cols=120  Identities=16%  Similarity=0.107  Sum_probs=100.9

Q ss_pred             CCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +++++|+++|||++  +|||+++|++|+++|++|++++++.+  +.++..+++.+.  ..++.++.+|++|++++.++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP--LNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc--cCcceEeecCcCCHHHHHHHHH
Confidence            35789999999986  89999999999999999999887643  234455556543  2456788999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+++|++|++|||||+..      +..+.+.++|++.+++|+.|+++++|
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~  131 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCK  131 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHH
Confidence            99999999999999999752      34477899999999999999999876

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.8e-23  Score=153.07  Aligned_cols=122  Identities=45%  Similarity=0.647  Sum_probs=106.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....++.++.++.+|++|.+++.++++++.+
T Consensus        12 ~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   91 (306)
T PRK06197         12 PDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRA   91 (306)
T ss_pred             ccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998777777667776554456788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..+....+.++++..+++|+.|++.+++
T Consensus        92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  133 (306)
T PRK06197         92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTG  133 (306)
T ss_pred             hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHH
Confidence            999999999999986554556778899999999999988764

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=3.5e-23  Score=151.11  Aligned_cols=118  Identities=15%  Similarity=0.196  Sum_probs=97.8

Q ss_pred             CCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|++||||+++  |||+++|++|+++|++|++++|+.... +..+++.+.. + ...++.+|++|.+++.++++++.
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~~-g-~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAESL-G-SDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHhc-C-CceEEeCCCCCHHHHHHHHHHHH
Confidence            47899999999996  999999999999999999999875322 2233343322 2 23578999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+..      +..+.+.++|++++++|+.++++++|
T Consensus        81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~  129 (271)
T PRK06505         81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAK  129 (271)
T ss_pred             HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHH
Confidence            99999999999999753      23468899999999999999999875

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.90  E-value=2.2e-23  Score=142.03  Aligned_cols=118  Identities=23%  Similarity=0.263  Sum_probs=104.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++.|.++|||+++|||++++..|++.|++|+.++++.+..++....+...   +......||+++..++++.+++..+.
T Consensus        11 r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~---~~h~aF~~DVS~a~~v~~~l~e~~k~   87 (256)
T KOG1200|consen   11 RLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY---GDHSAFSCDVSKAHDVQNTLEEMEKS   87 (256)
T ss_pred             HHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC---CccceeeeccCcHHHHHHHHHHHHHh
Confidence            467799999999999999999999999999999999977666666665332   46778899999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+++++|||||+..+  ...+..++|+.++.+|+.|+|+++|
T Consensus        88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tq  130 (256)
T KOG1200|consen   88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQ  130 (256)
T ss_pred             cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHH
Confidence            9999999999999864  3378999999999999999999886

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.90  E-value=5.9e-23  Score=148.20  Aligned_cols=118  Identities=22%  Similarity=0.271  Sum_probs=100.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.+|+++|||+++|||++++++|+++|++|++++|+..  ++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL--GRKFHFITADLIQQKDIDSIVSQAVE   79 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc--CCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988632  3334444433  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|++|++|||||+..  +..+.++++|++.+++|+.+++++++
T Consensus        80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  123 (251)
T PRK12481         80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQ  123 (251)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHH
Confidence            9999999999999764  34467899999999999999998875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.90  E-value=8.6e-23  Score=148.92  Aligned_cols=118  Identities=25%  Similarity=0.334  Sum_probs=104.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||+++|||++++++|+++|++|++++|+ +..++..+++.+.  +.++.++.+|+++++++.++++++.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN--GGKAKAYHVDISDEQQVKDFASEIKEQ   79 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999998 6667777777554  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..   +..+.+.+.|++++++|+.|++++++
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  123 (272)
T PRK08589         80 FGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTK  123 (272)
T ss_pred             cCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999753   23467889999999999999998875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=6.5e-23  Score=149.07  Aligned_cols=117  Identities=12%  Similarity=0.187  Sum_probs=98.9

Q ss_pred             CCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++|+++|||+++  |||+++|+.|+++|++|++++|+ ...++..+++....  ..+.++.+|++|+++++++++++.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   80 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQL--GSDIVLPCDVAEDASIDAMFAELGK   80 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhcc--CCceEeecCCCCHHHHHHHHHHHHh
Confidence            6899999999986  99999999999999999999987 34445555665542  3467789999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||+...       ..+.+.++|++.+++|+.|++++++
T Consensus        81 ~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  129 (262)
T PRK07984         81 VWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  129 (262)
T ss_pred             hcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHH
Confidence            99999999999997531       2356889999999999999998875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=146.99  Aligned_cols=122  Identities=23%  Similarity=0.223  Sum_probs=105.6

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +++++++|+++|||+++|||.++|++|+++|++|++++|+.+ ..++..+++...  +.++.++.+|++|++++.+++++
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~   79 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA--GRRAIQIAADVTSKADLRAAVAR   79 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHH
Confidence            445689999999999999999999999999999999999754 346666666554  45788899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|++|||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (254)
T PRK06114         80 TEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQ  126 (254)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHH
Confidence            9999999999999999864  33467889999999999999998765

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=1.1e-22  Score=147.44  Aligned_cols=122  Identities=11%  Similarity=0.071  Sum_probs=100.1

Q ss_pred             CCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++.+++|+++|||++  +|||+++|++|+++|++|++++|+... ++..+++.+...+.++.++.+|++|++++.+++++
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          2 MLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            346789999999997  899999999999999999999886322 22233333332245788899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|++|||||+..      +..+.+.++|+..+++|+.+++++++
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAR  131 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHH
Confidence            9999999999999999752      23467889999999999999998765

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.90  E-value=1.8e-23  Score=143.38  Aligned_cols=115  Identities=29%  Similarity=0.324  Sum_probs=100.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++|.++|||||++|||+++|++|.+.|-.|++|+|+++.+.+..++.      ..+....||+.|.++..++++.++++
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~------p~~~t~v~Dv~d~~~~~~lvewLkk~   75 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN------PEIHTEVCDVADRDSRRELVEWLKKE   75 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC------cchheeeecccchhhHHHHHHHHHhh
Confidence            478999999999999999999999999999999999987766665543      46778899999999999999999999


Q ss_pred             CCCccEEEEccccCCCC----CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASP----FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~----~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++|||||++...    .+-..++.++.+++|+.+|++|++
T Consensus        76 ~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~  120 (245)
T COG3967          76 YPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTA  120 (245)
T ss_pred             CCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHH
Confidence            99999999999997421    244567788899999999999875

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.3e-22  Score=144.72  Aligned_cols=119  Identities=16%  Similarity=0.092  Sum_probs=104.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.++++++.+++.+.  +.++..+.+|+++++++.++++++.++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL--TDNVYSFQLKDFSQESIRHLFDAIEQQ   79 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCCeEEEEccCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888887777654  456788899999999999999999999


Q ss_pred             CC-CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GL-PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~-~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++ ++|++|||||...   +..+.+.++|.+.+++|+.+++.+++
T Consensus        80 ~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (227)
T PRK08862         80 FNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQ  124 (227)
T ss_pred             hCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            98 9999999998542   34467889999999999999988754

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.90  E-value=8.5e-23  Score=147.84  Aligned_cols=119  Identities=18%  Similarity=0.204  Sum_probs=98.0

Q ss_pred             CCCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+++|+++|||+  ++|||+++|++|+++|++|++++|+..  ++..+++.+.. +.++.++.+|++|+++++++++++
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~--~~~~~~~~~~~-~~~~~~~~~Dv~~~~~i~~~~~~~   79 (256)
T PRK07889          3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA--LRLTERIAKRL-PEPAPVLELDVTNEEHLASLADRV   79 (256)
T ss_pred             ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc--hhHHHHHHHhc-CCCCcEEeCCCCCHHHHHHHHHHH
Confidence            3478999999999  899999999999999999999998642  12222333322 235778999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|++|||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  129 (256)
T PRK07889         80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAK  129 (256)
T ss_pred             HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999863      23467889999999999999998875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=2e-22  Score=145.34  Aligned_cols=120  Identities=18%  Similarity=0.223  Sum_probs=106.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+.+|++||||+++|||.+++++|+++|++|++++|+.++.++..+++...  +.++..+.+|++|++++.++++++.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE--GIKAHAAPFNVTHKQEVEAAIEHIEK   82 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987777777777654  45788899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (254)
T PRK08085         83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQ  126 (254)
T ss_pred             hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753  34467889999999999999998765

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.6e-22  Score=149.18  Aligned_cols=119  Identities=25%  Similarity=0.319  Sum_probs=104.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||+++++.|+++|++|++++|+.+.++++.+++..   +.++..+.+|++|.+++.++++++.+
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG---DDRVLTVVADVTDLAAMQAAAEEAVE   81 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987776666665532   34677788999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||+..  +..+.++++|++.+++|+.|++++++
T Consensus        82 ~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~  125 (296)
T PRK05872         82 RFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVR  125 (296)
T ss_pred             HcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999863  34578899999999999999999875

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=2e-22  Score=146.26  Aligned_cols=117  Identities=16%  Similarity=0.205  Sum_probs=98.3

Q ss_pred             CCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++|+++|||+++  |||+++|++|+++|++|++++|+. ..++..+++.+.. +. ..++.+|++|++++.++++++.+
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~-g~-~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEI-GC-NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhc-CC-ceEEEccCCCHHHHHHHHHHHHH
Confidence            6789999999997  999999999999999999999873 3344455555442 22 34678999999999999999999


Q ss_pred             cCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||+..      +..+.+.++|++.+++|+.+++++++
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  130 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSR  130 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999753      34478899999999999999999875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=1.6e-22  Score=146.83  Aligned_cols=117  Identities=13%  Similarity=0.115  Sum_probs=97.1

Q ss_pred             CCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++|+++|||+  ++|||+++|++|+++|++|++++|+. +.++..+++.+..  +....+.||++|++++.++++++.+
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGK   80 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence            78999999997  67999999999999999999998763 3344455554432  3356789999999999999999999


Q ss_pred             cCCCccEEEEccccCCC------C-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS------P-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~------~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||+...      . .+.+.++|+..+++|+.++++++|
T Consensus        81 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~  129 (261)
T PRK08690         81 HWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAK  129 (261)
T ss_pred             HhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHH
Confidence            99999999999998632      1 246778999999999999998875

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2e-22  Score=151.04  Aligned_cols=120  Identities=20%  Similarity=0.239  Sum_probs=106.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+++++|||+++|||++++++|+++|++|++++|+.++++++.+++...  +.++.++.+|++|.+++.++++++.+
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~--g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA--GGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3477899999999999999999999999999999999988777777777654  56888999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  125 (334)
T PRK07109         82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTL  125 (334)
T ss_pred             HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753  34578999999999999999988664

>PRK09242 tropinone reductase; Provisional

Probab=99.89  E-value=2.6e-22  Score=144.95  Aligned_cols=124  Identities=28%  Similarity=0.342  Sum_probs=110.2

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++.+++|+++|||+++|||.+++++|+++|++|++++|+.+..++..+++....++.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (257)
T PRK09242          3 HRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWV   82 (257)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999998877777777776655678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.++++|++|||+|...  +..+.+.+++++.+++|+.|++++++
T Consensus        83 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  128 (257)
T PRK09242         83 EDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSR  128 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999753  34467899999999999999998865

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=2.2e-22  Score=147.01  Aligned_cols=118  Identities=13%  Similarity=0.136  Sum_probs=97.8

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.+|+++|||++  +|||+++|++|+++|++|++++|+. ...+..+++.+..  +....+.+|++|+++++++++++.
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   83 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-ALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLE   83 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-HHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHH
Confidence            4678999999997  8999999999999999999998863 2233344444332  235578999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+..      +..+.+.++|++.+++|+.|+++++|
T Consensus        84 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  132 (272)
T PRK08159         84 KKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQ  132 (272)
T ss_pred             HhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHH
Confidence            99999999999999753      33467899999999999999999875

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.8e-22  Score=145.34  Aligned_cols=116  Identities=21%  Similarity=0.267  Sum_probs=101.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.+.
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL-----GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            478899999999999999999999999999999999876555554443     457889999999999999999999999


Q ss_pred             CCCccEEEEccccCC-CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA-SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||... ...+.+.++|++.+++|+.+++++++
T Consensus        78 ~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (261)
T PRK08265         78 FGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQ  119 (261)
T ss_pred             hCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHH
Confidence            999999999999753 23467889999999999999998875

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.89  E-value=2e-22  Score=150.17  Aligned_cols=120  Identities=37%  Similarity=0.533  Sum_probs=103.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+.+|+++|||+++|||.+++++|+++|++|++++|+.++.+++.+++...  +.++.++.+|++|.+++.++++++.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   79 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIP--PDSYTIIHIDLGDLDSVRRFVDDFRA   79 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999877777666666432  45788999999999999999999888


Q ss_pred             cCCCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||||+..+   ..+.+.++++..+++|+.|++++++
T Consensus        80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (322)
T PRK07453         80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCN  124 (322)
T ss_pred             hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHH
Confidence            88899999999997643   2356889999999999999999875

>PLN02253 xanthoxin dehydrogenase

Probab=99.89  E-value=3.2e-22  Score=146.21  Aligned_cols=119  Identities=24%  Similarity=0.264  Sum_probs=102.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++.+++..   +.++.++.+|++|.+++.++++.+.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~   90 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG---EPNVCFFHCDVTVEDDVSRAVDFTVD   90 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC---CCceEEEEeecCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999986655555554421   35788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||...    +..+.+.++++..+++|+.|++++++
T Consensus        91 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  136 (280)
T PLN02253         91 KFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMK  136 (280)
T ss_pred             HhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHH
Confidence            9999999999999753    23467889999999999999998765

>PRK06194 hypothetical protein; Provisional

Probab=99.89  E-value=3.8e-22  Score=146.23  Aligned_cols=119  Identities=27%  Similarity=0.279  Sum_probs=104.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++++++|||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|.+++.++++.+.+.
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~~~~   80 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ--GAEVLGVRTDVSDAAQVEALADAALER   80 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999877777777766544  457888999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||....  ..+.+.++++..+++|+.|++++++
T Consensus        81 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  123 (287)
T PRK06194         81 FGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVR  123 (287)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHH
Confidence            9999999999998643  3367889999999999999998654

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=5.2e-22  Score=147.21  Aligned_cols=121  Identities=28%  Similarity=0.321  Sum_probs=104.9

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +..++++|+++|||+++|||.+++++|+++|++|++++++. +..++..++++..  +.++.++.+|++|++++.+++++
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA--GAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHHHHHH
Confidence            44678999999999999999999999999999999998753 3456666777654  57889999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+ +|++|+||||||+..+  ..+.+.++|+..+++|+.|++++++
T Consensus        84 ~~~-~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~  129 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTR  129 (306)
T ss_pred             HHH-hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence            988 9999999999998643  3467889999999999999999865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.89  E-value=2.7e-22  Score=145.29  Aligned_cols=122  Identities=14%  Similarity=0.211  Sum_probs=102.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +..+++|+++|||+++|||++++++|+++|++|++++| +.+..+...+++.... +.++.++.+|++|++++.++++++
T Consensus         3 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          3 SNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKY-GIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence            34688999999999999999999999999999998876 4445555556665432 457899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.++++|++|||||+..        +..+.+++++++.+++|+.+++.+++
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  133 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQ  133 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999998642        23367789999999999999988654

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.89  E-value=1.5e-22  Score=137.27  Aligned_cols=115  Identities=37%  Similarity=0.507  Sum_probs=101.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc--CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN--MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |+++|||+++|||++++++|+++|+ +|++++|+  .+..+++.+++...  +.++.++.+|++++++++++++++.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP--GAKITFIECDLSDPESIRALIEEVIKRF   78 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT--TSEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 78889998  55667777777755  6899999999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||+|...  +..+.+.++++++|++|+.+++++.|
T Consensus        79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  120 (167)
T PF00106_consen   79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAK  120 (167)
T ss_dssp             SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccccccccccccccccccchhhhhccccccceeeeeee
Confidence            99999999999875  23367889999999999999999875

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06196 oxidoreductase; Provisional

Probab=99.89  E-value=2.9e-22  Score=149.02  Aligned_cols=116  Identities=48%  Similarity=0.645  Sum_probs=101.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+.++.++..+++.      .+.++.+|++|.+++.++++++.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~------~v~~~~~Dl~d~~~v~~~~~~~~~   95 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID------GVEVVMLDLADLESVRAFAERFLD   95 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh------hCeEEEccCCCHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998776655555442      367889999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..+....+.++++..+++|+.|++++++
T Consensus        96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  137 (315)
T PRK06196         96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVN  137 (315)
T ss_pred             cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHH
Confidence            999999999999986544556778899999999999998875

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.88  E-value=6e-22  Score=147.34  Aligned_cols=117  Identities=36%  Similarity=0.535  Sum_probs=101.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+|+++|||+++|||++++++|+++| ++|++++|+.+..+++.+++...  +.++.++.+|+++.+++.++++++.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   79 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMP--KDSYTIMHLDLGSLDSVRQFVQQFRESG   79 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999 99999999987776666665432  4578889999999999999999998888


Q ss_pred             CCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||||+..+   ..+.+.++|+..+++|+.|++++++
T Consensus        80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  122 (314)
T TIGR01289        80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCN  122 (314)
T ss_pred             CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHH
Confidence            999999999997542   2356889999999999999999875

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.88  E-value=4.7e-22  Score=147.06  Aligned_cols=121  Identities=17%  Similarity=0.227  Sum_probs=99.0

Q ss_pred             CCCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh-------CCCC----eeEEEEecC--
Q 044688           25 IDATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-------IPTA----KVDVLELDL--   89 (147)
Q Consensus        25 ~~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-------~~~~----~~~~~~~D~--   89 (147)
                      ++++||++||||+  ++|||+++|+.|++.|++|++ +|+.+.++.+...+++.       .+.+    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            4589999999999  799999999999999999998 77777777776666431       0111    246788898  


Q ss_pred             CC------------------HHHHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           90 SS------------------LASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        90 ~~------------------~~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++                  ++++.++++++.+++|++|+||||||+.    .+..+.+.++|+++|++|+.|+++++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            33                  3489999999999999999999999753    344578999999999999999999876

>PRK05717 oxidoreductase; Validated

Probab=99.88  E-value=6.9e-22  Score=142.70  Aligned_cols=119  Identities=25%  Similarity=0.252  Sum_probs=101.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +...+++|+++|||++++||.+++++|+++|++|++++|+.+..++...++     +.++.++.+|+++.+++.++++++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~~~~~~~~~   78 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL-----GENAWFIAMDVADEAQVAAGVAEV   78 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHH
Confidence            445788999999999999999999999999999999998865544433322     456888999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|++|||||...+    ..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (255)
T PRK05717         79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK  126 (255)
T ss_pred             HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999997632    2357889999999999999999875

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=143.19  Aligned_cols=120  Identities=19%  Similarity=0.194  Sum_probs=102.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-------chHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-------GTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      +++.+|+++|||+++|||.++++.|+++|++|++++|+.+.       +++..+++...  +.++.++.+|+++++++.+
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~   79 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA--GGQALPLVGDVRDEDQVAA   79 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHH
Confidence            34788999999999999999999999999999999997643       23344445443  5678899999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++.+.++++|+||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  130 (273)
T PRK08278         80 AVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQ  130 (273)
T ss_pred             HHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHH
Confidence            99999999999999999999753  33467889999999999999999875

>PRK06128 oxidoreductase; Provisional

Probab=99.88  E-value=2e-21  Score=143.60  Aligned_cols=119  Identities=26%  Similarity=0.285  Sum_probs=101.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|++||||+++|||++++++|+++|++|++++++.+  ..++..+.+.+.  +.++.++.+|+++.+++.++++++.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE--GRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHHH
Confidence            477899999999999999999999999999999887643  234444555443  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|+||||||...   +..+.+.++|++.+++|+.|++++++
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  175 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCK  175 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999752   34478899999999999999998875

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.2e-21  Score=141.21  Aligned_cols=120  Identities=24%  Similarity=0.264  Sum_probs=105.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+.+..++..+.+.+.  +.++.++.+|+++.+++.++++++.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA--GGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987777777776554  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...   +..+.+.+++++.+++|+.+++++++
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMK  125 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999753   23467889999999999999987654

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=140.72  Aligned_cols=120  Identities=28%  Similarity=0.410  Sum_probs=105.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||.+++++|+++|++|++++|+.+..+.+.+++.+.  +.++.++.+|+++.+++.++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA--GGKAEALACHIGEMEQIDALFAHIRE   81 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999887777777777654  45788899999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...   +..+.+.++++..+++|+.+++++++
T Consensus        82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (252)
T PRK07035         82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSV  126 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999642   34467889999999999999998764

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=1.4e-21  Score=141.00  Aligned_cols=119  Identities=28%  Similarity=0.342  Sum_probs=105.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||++++||++++++|+++|++|++++|+.+..++..+.+...  +.++.++.+|++|++++.++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ--GLSAHALAFDVTDHDAVRAAIDAFEAE   84 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            478999999999999999999999999999999999977766666666554  467889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        85 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (255)
T PRK07523         85 IGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQ  127 (255)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999763  33467889999999999999998875

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=141.15  Aligned_cols=119  Identities=18%  Similarity=0.160  Sum_probs=104.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||++++||++++++|+++|++|++++|+++..+++..++...  +.++.++.+|++|++++.++++++.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL--GRRALAVPTDITDEDQCANLVALALER   79 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999887777777766554  467889999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...   +..+.+.+++++.+++|+.|++.+++
T Consensus        80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  123 (258)
T PRK07890         80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQ  123 (258)
T ss_pred             cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999753   23367889999999999999998875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.88  E-value=1.3e-21  Score=142.88  Aligned_cols=120  Identities=25%  Similarity=0.298  Sum_probs=104.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.+|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          6 FSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA--GGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             eccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999877777777776554  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-----------------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-----------------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-----------------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...+                 ..+.+.++|++.+++|+.+++++++
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  142 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQ  142 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            99999999999996421                 2357789999999999999998764

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=140.87  Aligned_cols=119  Identities=24%  Similarity=0.345  Sum_probs=102.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|++||||+++|||.+++++|+++|++|++++|+ +..+++.+.+...  +.++.++.+|+++.+++.++++++.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE--GRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998 4455555555443  46788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQ  131 (258)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHH
Confidence            9999999999999753  33467889999999999999988775

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.88  E-value=9.8e-22  Score=142.63  Aligned_cols=118  Identities=14%  Similarity=0.104  Sum_probs=95.0

Q ss_pred             CCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+++|||+  ++|||+++|++|+++|++|++++|.. ...+..+++.+.. + ...++.+|++|++++.++++++.
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~-~-~~~~~~~Dv~d~~~v~~~~~~~~   79 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-RFKDRITEFAAEF-G-SDLVFPCDVASDEQIDALFASLG   79 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-HHHHHHHHHHHhc-C-CcceeeccCCCHHHHHHHHHHHH
Confidence            367899999996  68999999999999999999987642 2223333443332 2 23468999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS-------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+...       ..+.+.++|++.+++|+.|+++++|
T Consensus        80 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~  129 (260)
T PRK06997         80 QHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAK  129 (260)
T ss_pred             HHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999998532       1247889999999999999999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.88  E-value=1.6e-21  Score=141.60  Aligned_cols=120  Identities=20%  Similarity=0.231  Sum_probs=106.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+.+|+++|||++++||.+++++|+++|++|++++|+.++.++..+.+...  +.++.++.+|+++++++.++++++.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL--GIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999887777777777654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||+..  +..+.+.+++++++++|+.|++.+++
T Consensus        84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (265)
T PRK07097         84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSK  127 (265)
T ss_pred             hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            9999999999999864  33467889999999999999998765

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.88  E-value=5e-22  Score=133.39  Aligned_cols=117  Identities=29%  Similarity=0.348  Sum_probs=106.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.+|-+++|||+++|+|++.+++|+++|+.|++.+...++-++..+++     +.++.+.+.|+++++++...+...+.+
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel-----g~~~vf~padvtsekdv~aala~ak~k   80 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL-----GGKVVFTPADVTSEKDVRAALAKAKAK   80 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh-----CCceEEeccccCcHHHHHHHHHHHHhh
Confidence            467889999999999999999999999999999999888888888877     889999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--------CCCCCCHHHHHHhhhhhhhhhhhhccC
Q 044688          106 GLPLNILINNAGIMA--------SPFMLSKDNIELQFATNHLGSLHLHML  147 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~N~~g~~~l~~~  147 (147)
                      ||++|.+|||||+..        .....+.|+|++++++|+.|+|+..++
T Consensus        81 fgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl  130 (260)
T KOG1199|consen   81 FGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRL  130 (260)
T ss_pred             ccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeee
Confidence            999999999999752        233568899999999999999998764

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.3e-21  Score=141.02  Aligned_cols=116  Identities=22%  Similarity=0.215  Sum_probs=102.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||.++++.|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+.+++
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF--PGQVLTVQMDVRNPEDVQKMVEQIDEKFGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            589999999999999999999999999999999977666666666544  457889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|...  +..+.+.++|++.+++|+.|++++++
T Consensus        79 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (252)
T PRK07677         79 IDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQ  118 (252)
T ss_pred             ccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHH
Confidence            999999998642  34478899999999999999999875

>PRK09186 flagellin modification protein A; Provisional

Probab=99.87  E-value=1.9e-21  Score=140.18  Aligned_cols=120  Identities=23%  Similarity=0.233  Sum_probs=103.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|+++|||+++|||+++|+.|+++|++|++++|+.+..++...++....++..+.++.+|++|++++.++++++.+++
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999988777777777554334456778999999999999999999999


Q ss_pred             CCccEEEEccccCC-----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA-----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||||...     +..+.+.++++..+++|+.+++++++
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQ  126 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHH
Confidence            99999999997532     34467889999999999999998764

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.87  E-value=2.3e-21  Score=139.96  Aligned_cols=118  Identities=19%  Similarity=0.237  Sum_probs=100.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||+++|||.+++++|++.|++|+++++..  .++..+.+...  +.++..+.+|++|.+++.++++++.+
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTAL--GRRFLSLTADLRKIDGIPALLERAVA   81 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999887753  23444555443  45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (253)
T PRK08993         82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQ  125 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999999763  34467889999999999999998875

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=140.25  Aligned_cols=118  Identities=21%  Similarity=0.218  Sum_probs=101.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+. ...+..+++...  +.++.++.+|+++.+++.++++++.++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAA--GGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhc--CCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999999999999999974 234455555443  467889999999999999999999999


Q ss_pred             CCCccEEEEccccC---CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||..   .+..+.+.++++..+++|+.+++++++
T Consensus        82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (260)
T PRK12823         82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCR  125 (260)
T ss_pred             cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHH
Confidence            99999999999864   344578899999999999999998764

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-21  Score=142.04  Aligned_cols=116  Identities=23%  Similarity=0.248  Sum_probs=98.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++.+++     +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF-----GDHVLVVEGDVTSYADNQRAVDQTVDA   77 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHh
Confidence            468899999999999999999999999999999999876655554433     346788999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHH----HHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDN----IELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~----~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||+..   +..+.+.++    |++++++|+.+++++++
T Consensus        78 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T PRK06200         78 FGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAK  125 (263)
T ss_pred             cCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHH
Confidence            999999999999753   233455554    88999999999998775

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-21  Score=140.91  Aligned_cols=122  Identities=17%  Similarity=0.210  Sum_probs=105.1

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++++++|+++|||+++|||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|+++++++.++++++
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA--GPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999877666666666554  456788999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.++++|++|||||...  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  126 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLK  126 (264)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999998642  33467889999999999999998765

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.87  E-value=7.3e-22  Score=137.40  Aligned_cols=115  Identities=23%  Similarity=0.347  Sum_probs=101.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++||.+++||+.+|||++++++|++.|..+.++..+.+. .+....|++.+|..++.+++||+++..++++.++++..
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En-~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEEN-PEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhC-HHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            46789999999999999999999999999877666655444 66778899999999999999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|.||++||+||+..      ..+|++.+.+|+.|.++-++
T Consensus        80 ~fg~iDIlINgAGi~~------dkd~e~Ti~vNLtgvin~T~  115 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD------DKDWERTINVNLTGVINGTQ  115 (261)
T ss_pred             HhCceEEEEccccccc------chhHHHhhccchhhhhhhhh
Confidence            9999999999999863      56799999999999887543

>PRK08643 acetoin reductase; Validated

Probab=99.87  E-value=2.2e-21  Score=139.99  Aligned_cols=116  Identities=22%  Similarity=0.263  Sum_probs=102.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||++++||.+++++|+++|++|++++|+.+..+++..++...  +.++.++.+|+++++++.++++++.+++++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD--GGKAIAVKADVSDRDQVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            689999999999999999999999999999999887777777777654  467889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||||...  +..+.+.++++..+++|+.|++++++
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (256)
T PRK08643         80 LNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQ  119 (256)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999753  34467889999999999999987654

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.1e-21  Score=143.14  Aligned_cols=121  Identities=30%  Similarity=0.336  Sum_probs=104.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ...+++++++|||+++|||+++++.|+++|++|++++|+.+.++++.+++...  +.++.++.+|++|.+++.++++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  112 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA--GGDAMAVPCDLSDLDAVDALVADVE  112 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999987777777776554  4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCC--CC--CCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASP--FM--LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~--~~--~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++|||||.....  .+  .+.++++..+++|+.|++++++
T Consensus       113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  159 (293)
T PRK05866        113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIR  159 (293)
T ss_pred             HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999976422  12  2457889999999999998765

>PRK06398 aldose dehydrogenase; Validated

Probab=99.87  E-value=2.4e-21  Score=140.34  Aligned_cols=108  Identities=27%  Similarity=0.280  Sum_probs=96.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.             ..++.++.+|++|++++.++++++.++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~-------------~~~~~~~~~D~~~~~~i~~~~~~~~~~   69 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-------------YNDVDYFKVDVSNKEQVIKGIDYVISK   69 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc-------------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999987542             125778999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        70 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  112 (258)
T PRK06398         70 YGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSK  112 (258)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999753  34468899999999999999999875

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.2e-21  Score=139.26  Aligned_cols=120  Identities=20%  Similarity=0.262  Sum_probs=102.9

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|+++|||+++|||++++++|+++|++|++++|+++.. +..+++.+.  +.++.++.+|+++++++.++++++.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   78 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL--QPRAEFVQVDLTDDAQCRDAVEQTV   78 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999987665 556666554  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++|||||.... ..+.+.++|+..+++|+.+++++++
T Consensus        79 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (258)
T PRK08628         79 AKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAH  122 (258)
T ss_pred             HhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999997532 2344448899999999999998765

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.87  E-value=1.3e-21  Score=141.75  Aligned_cols=116  Identities=22%  Similarity=0.232  Sum_probs=96.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++..    .. +.++.++.+|+++.+++.++++++.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEA----AH-GDAVVGVEGDVRSLDDHKEAVARCVAA   76 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----hc-CCceEEEEeccCCHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999998655444332    22 456888999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCH----HHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSK----DNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~----~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||+..   +..+.+.    ++|++.+++|+.|++++++
T Consensus        77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  124 (262)
T TIGR03325        77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVK  124 (262)
T ss_pred             hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHH
Confidence            999999999999742   2223332    5799999999999998875

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.87  E-value=4.4e-21  Score=138.43  Aligned_cols=121  Identities=26%  Similarity=0.333  Sum_probs=106.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.+++|+++|||++++||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|+++++++.++++++.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA--GGAAEALAFDIADEEAVAAAFARID   83 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHH
Confidence            45688999999999999999999999999999999999977777777777654  5578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ..++++|++|||+|...  +..+.+.++|++.+++|+.+++.+++
T Consensus        84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  128 (256)
T PRK06124         84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSR  128 (256)
T ss_pred             HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999764  33467889999999999999998874

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.87  E-value=3.9e-21  Score=139.44  Aligned_cols=119  Identities=24%  Similarity=0.281  Sum_probs=104.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++++|||+++|||.++++.|+++|++|++++|+.+..+++.+.+...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   84 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA--GRRAHVVAADLAHPEATAGLAGQAVEA   84 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            477999999999999999999999999999999999987777777766544  457888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  ...+.+.++++..+++|+.+++.+++
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (263)
T PRK07814         85 FGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTV  127 (263)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHH
Confidence            999999999999753  23467889999999999999998865

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.87  E-value=7.8e-21  Score=137.69  Aligned_cols=121  Identities=21%  Similarity=0.276  Sum_probs=104.7

Q ss_pred             CCCCCEEEEecCCC-chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASS-GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.+|+++|||+++ |||.++++.|+++|++|++++|+.+..++..+++.+..+..++.++.+|+++++++.++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999985 99999999999999999999998877777777776544335788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        94 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATR  137 (262)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999753  34467889999999999999998765

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.87  E-value=3.6e-21  Score=139.03  Aligned_cols=117  Identities=25%  Similarity=0.309  Sum_probs=101.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||++++||.+++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.+
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI-----GPAAIAVSLDVTRQDSIDRIVAAAVE   76 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3477899999999999999999999999999999999877665555444     34688899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...  +..+.+.++++..+++|+.+++++++
T Consensus        77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (257)
T PRK07067         77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQ  120 (257)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHH
Confidence            9999999999999753  34467889999999999999998875

>PRK07985 oxidoreductase; Provisional

Probab=99.87  E-value=4.9e-21  Score=141.27  Aligned_cols=119  Identities=25%  Similarity=0.241  Sum_probs=100.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+..  ..+++.+.+...  +.++.++.+|++|.+++.++++++.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  123 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC--GRKAVLLPGDLSDEKFARSLVHEAH  123 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            478899999999999999999999999999999887532  334444444333  4578889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++|||||...   +..+.+.++|++.+++|+.|++++++
T Consensus       124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  169 (294)
T PRK07985        124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQ  169 (294)
T ss_pred             HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999642   34578899999999999999998875

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.3e-21  Score=137.84  Aligned_cols=120  Identities=26%  Similarity=0.254  Sum_probs=103.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||++++||.+++++|+++|++|++++|+.+...++.+++...  +.++..+.+|+++.+++.++++++.+
T Consensus         2 ~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          2 GRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD--GGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578899999999999999999999999999999999876666666666543  34677889999999999999999999


Q ss_pred             cCCCccEEEEccccCC-----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA-----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||||+..     +..+.+.+++++.+++|+.+++++++
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTR  126 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999999753     22356889999999999999998765

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.87  E-value=6.5e-21  Score=137.59  Aligned_cols=120  Identities=28%  Similarity=0.336  Sum_probs=105.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++..++...  +.++.++.+|+++.+++.++++.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~   84 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFALS   84 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999877777777776554  56788899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...+ ..+.+.+++++.+++|+.|++++++
T Consensus        85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (255)
T PRK06113         85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ  127 (255)
T ss_pred             HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHH
Confidence            99999999999997542 2367889999999999999998875

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.87  E-value=5.5e-21  Score=138.09  Aligned_cols=119  Identities=29%  Similarity=0.264  Sum_probs=104.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||++++||.+++++|+++|++|++++|+++..++..+.+.+.  +.++.++.+|+++.+++.++++++..+
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA--GGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc--CceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777777777654  567888999999999999999999988


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  +..+.+.++++..+++|+.+++.+++
T Consensus        82 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  124 (262)
T PRK13394         82 FGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTK  124 (262)
T ss_pred             cCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHH
Confidence            999999999999764  23356788999999999999887654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.3e-21  Score=136.94  Aligned_cols=118  Identities=25%  Similarity=0.256  Sum_probs=104.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+++.+.+....++.++.++.+|+++.+++.++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999998877777777776655678999999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||||+...  ..+.+.+.+++.+++|+.+++++++
T Consensus        82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (248)
T PRK08251         82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCE  121 (248)
T ss_pred             CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999998642  2356778889999999999988764

>PRK06484 short chain dehydrogenase; Validated

Probab=99.86  E-value=4.3e-21  Score=151.07  Aligned_cols=116  Identities=19%  Similarity=0.296  Sum_probs=101.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ...+|+++|||+++|||+++|++|+++|++|++++|+.+..+++.+++     +.++..+.+|++|++++.++++++.++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~  340 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL-----GDEHLSVQADITDEAAVESAFAQIQAR  340 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876665555443     456778899999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..   +..+.+.++|++++++|+.|++++++
T Consensus       341 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  384 (520)
T PRK06484        341 WGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACAR  384 (520)
T ss_pred             cCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHH
Confidence            999999999999753   34478899999999999999999875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.86  E-value=7.9e-21  Score=136.42  Aligned_cols=117  Identities=23%  Similarity=0.296  Sum_probs=99.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||++++||.+++++|+++|++|++++|+.  ..+..+.+...  +.++.++.+|+++.+++.++++++.+.
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEAL--GRRFLSLTADLSDIEAIKALVDSAVEE   77 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999864  23344444443  457889999999999999999999998


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...+  ..+.+.++|++.+++|+.+++++++
T Consensus        78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  120 (248)
T TIGR01832        78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQ  120 (248)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999998642  3367788999999999999998875

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.86  E-value=4.7e-21  Score=139.59  Aligned_cols=115  Identities=25%  Similarity=0.296  Sum_probs=99.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++++|||+++|||.+++++|+++|++|++++|+.+..++...++      .++.++.+|++|++++.++++.+.+.
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   75 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL------GLVVGGPLDVTDPASFAAFLDAVEAD   75 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------ccceEEEccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999876655544443      14678899999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||+..  +..+.+.+.+++++++|+.|++++++
T Consensus        76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  118 (273)
T PRK07825         76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSK  118 (273)
T ss_pred             cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999864  34467889999999999999998765

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.86  E-value=7.7e-21  Score=137.35  Aligned_cols=118  Identities=21%  Similarity=0.164  Sum_probs=102.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||++++||.+++++|+++|++|++++|+.+..+...+.+....+..++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999987777666666665432357889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||||...  +..+.+.++|+..+++|+.|++++++
T Consensus        82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (259)
T PRK12384         82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAR  121 (259)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHH
Confidence            999999999764  23467889999999999999998765

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.86  E-value=9.5e-21  Score=137.16  Aligned_cols=119  Identities=22%  Similarity=0.281  Sum_probs=101.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||++++||.+++++|+++|++|++++|+. +......+++...  +.++.++.+|++|.+++.++++.+.+
T Consensus         4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA--GGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999988854 3345555666554  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...  +..+.+.+.|++.+++|+.+++++++
T Consensus        82 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  125 (261)
T PRK08936         82 EFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSR  125 (261)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999764  23467889999999999999987654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1.1e-20  Score=135.12  Aligned_cols=119  Identities=27%  Similarity=0.299  Sum_probs=104.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++++|||++++||..++++|+++|++|++++|+.+..++...++...  +.++.++.+|+++++++.++++++.++
T Consensus         4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY--GVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999987777666666543  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  +..+.+++++++.+++|+.|++++++
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  124 (239)
T PRK07666         82 LGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATR  124 (239)
T ss_pred             cCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999753  23467889999999999999988764

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=138.28  Aligned_cols=121  Identities=23%  Similarity=0.295  Sum_probs=102.7

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ...+++|++||||++++||.+++++|+++|++|++++|+... .+...+.+...  +.++.++.+|+++.+++.++++++
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~i  118 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE--GVKCLLIPGDVSDEAFCKDAVEET  118 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999998543 34444444433  567889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.++++|++|||||...   +..+.+.++|.+.+++|+.+++++++
T Consensus       119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  165 (290)
T PRK06701        119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTK  165 (290)
T ss_pred             HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999752   34467889999999999999999875

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=136.02  Aligned_cols=119  Identities=24%  Similarity=0.278  Sum_probs=100.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +..+|+++|||++++||.+++++|+++|++|+++.+. .+..+.+...+...  +.++.++.+|++|.+++.++++++.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~   83 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL--GRRAVALQADLADEAEVRALVARASA   83 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999887664 34455555555443  56788999999999999999999998


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (258)
T PRK09134         84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQ  127 (258)
T ss_pred             HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            8999999999999764  34467889999999999999998875

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.3e-20  Score=135.39  Aligned_cols=118  Identities=27%  Similarity=0.323  Sum_probs=102.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||++++||.+++++|+++|++|++++|+.+...+...++. .  +.++.++.+|++|++++.++++++.++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~i~~~   78 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-A--GGRAFARQGDVGSAEAVEALVDFVAAR   78 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-c--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998766665555554 2  567899999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  ...+.+.+++++.+++|+.+++++++
T Consensus        79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (252)
T PRK06138         79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAK  121 (252)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHH
Confidence            999999999999754  23467889999999999999988764

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=5e-21  Score=132.29  Aligned_cols=113  Identities=21%  Similarity=0.312  Sum_probs=100.7

Q ss_pred             CCCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh-
Q 044688           27 ATGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-  104 (147)
Q Consensus        27 ~~~~~~litG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-  104 (147)
                      -+.|.++|||++ ||||.+++++|.+.|+.|+.+.|+.+...++....       .+....+|+++++++..+..++.. 
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-------gl~~~kLDV~~~~~V~~v~~evr~~   77 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-------GLKPYKLDVSKPEEVVTVSGEVRAN   77 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-------CCeeEEeccCChHHHHHHHHHHhhC
Confidence            356899999997 79999999999999999999999988877766543       377889999999999999999988 


Q ss_pred             cCCCccEEEEccccC--CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|.+|+|+||||..  .|..+.+.+..+++|++|++|+++++|
T Consensus        78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~  121 (289)
T KOG1209|consen   78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCR  121 (289)
T ss_pred             CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHH
Confidence            789999999999975  466789999999999999999999886

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.86  E-value=9.9e-21  Score=136.43  Aligned_cols=112  Identities=24%  Similarity=0.282  Sum_probs=97.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+.        ...  +.++.++.+|+++++++.++++.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   71 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVD--GRPAEFHAADVRDPDQVAALVDAIVE   71 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998543        111  45688899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||+..  +..+.+.+++++.+++|+.+++++++
T Consensus        72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  115 (252)
T PRK07856         72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQ  115 (252)
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999764  23467889999999999999998875

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.6e-20  Score=135.94  Aligned_cols=118  Identities=25%  Similarity=0.334  Sum_probs=100.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||++++||++++++|+++|++|++++|+.+ ..+..+++...  +.++.++.+|+++++++.++++++.+.
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~   79 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGR--GHRCTAVVADVRDPASVAAAIKRAKEK   79 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHh--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999864 33444444433  467889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (263)
T PRK08226         80 EGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTK  122 (263)
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999753  34467889999999999999998765

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.4e-20  Score=135.56  Aligned_cols=118  Identities=25%  Similarity=0.262  Sum_probs=97.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh-
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-  104 (147)
                      +++|+++|||+++|||.+++++|+++|++|++++ ++.+..++...++...  +.++..+.+|+++.+++..+++++.+ 
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDNE   79 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc--CCceEEEecccCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999998875 4445555566666544  45678899999999999998888765 


Q ss_pred             ---cCC--CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 ---KGL--PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ---~~~--~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         +++  ++|+||||||+..  +..+.+.++|++++++|+.|++++++
T Consensus        80 ~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  128 (252)
T PRK12747         80 LQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ  128 (252)
T ss_pred             hhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence               334  8999999999753  23467889999999999999999875

>PRK05855 short chain dehydrogenase; Validated

Probab=99.86  E-value=9.3e-21  Score=150.22  Aligned_cols=120  Identities=27%  Similarity=0.279  Sum_probs=107.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+++++||||++|||++++++|+++|++|++++|+.+..+++.+.++..  +.++.++.+|++|++++.++++++.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  388 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA--GAVAHAYRVDVSDADAMEAFAEWVRA  388 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999987777777777655  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|++|++|||||+..  +..+.+.+++++++++|+.|++++++
T Consensus       389 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  432 (582)
T PRK05855        389 EHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCR  432 (582)
T ss_pred             hcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999864  34478899999999999999998775

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-20  Score=135.45  Aligned_cols=116  Identities=25%  Similarity=0.303  Sum_probs=99.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||++++||.+++++|+++|++|++++|+.+...+..+++     +.++.++.+|++|.+++.++++.+.+.
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL-----GESALVIRADAGDVAAQKALAQALAEA   77 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999865444444333     457888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  +..+.+.++++..+++|+.|++++++
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (249)
T PRK06500         78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQ  120 (249)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999754  23367889999999999999999875

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.1e-20  Score=134.14  Aligned_cols=120  Identities=28%  Similarity=0.319  Sum_probs=105.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||++++||.++++.|+++|++|++++|+++...+..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          3 SNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA--GGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3577899999999999999999999999999999999887777777777554  46788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.+.++..+++|+.+++++++
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  124 (250)
T PRK12939         81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLR  124 (250)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999764  23467889999999999999988764

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.85  E-value=1.7e-20  Score=135.58  Aligned_cols=120  Identities=22%  Similarity=0.261  Sum_probs=104.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|++||||++++||.+++++|+++|++|++++|+.+..+...+++...  +.++.++.+|++|++++.++++++.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~--~~~~~~~~~Dl~d~~~i~~~~~~~~~   85 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL--GIDALWIAADVADEADIERLAEETLE   85 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999877666666666544  45788899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...  +..+.+.+.|++.+++|+.+++++++
T Consensus        86 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  129 (259)
T PRK08213         86 RFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQ  129 (259)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHH
Confidence            9999999999999753  33467889999999999999998875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.85  E-value=9.7e-21  Score=149.08  Aligned_cols=115  Identities=24%  Similarity=0.328  Sum_probs=101.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..+|+++|||+++|||++++++|+++|++|++++|+.+.++++.+++     +.++.++.+|+++++++.++++++.+++
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   77 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL-----GPDHHALAMDVSDEAQIREGFEQLHREF   77 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEeccCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999877666555544     4567889999999999999999999999


Q ss_pred             CCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||||||+..    +..+.+.++|++++++|+.+++++++
T Consensus        78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (520)
T PRK06484         78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAR  121 (520)
T ss_pred             CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999742    33478899999999999999998875

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1.7e-20  Score=134.81  Aligned_cols=118  Identities=19%  Similarity=0.260  Sum_probs=102.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEE-EEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFM-AVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.+++++|||++++||++++++|+++|++|++ ..|+.+..+++.++++..  +.++.++.+|++|++++.++++++.+.
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL--GRKALAVKANVGDVEKIKEMFAQIDEE   79 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999876 577776666666666654  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||+|...  +..+.+.++++..+++|+.+++++++
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (250)
T PRK08063         80 FGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQ  122 (250)
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999753  44577889999999999999998865

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.9e-20  Score=135.43  Aligned_cols=119  Identities=24%  Similarity=0.340  Sum_probs=98.8

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccC-----------ccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNM-----------AAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++||+++|||++  +|||.++|++|+++|++|++++++.           +...+..+++.+.  +.++.++.+|+++.
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~   80 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN--GVKVSSMELDLTQN   80 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc--CCeEEEEEcCCCCH
Confidence            5889999999999  4999999999999999999876431           1122333444443  56888999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++.+.+|++|++|||||...  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  136 (256)
T PRK12859         81 DAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSS  136 (256)
T ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999753  34478999999999999999998864

>PLN00015 protochlorophyllide reductase

Probab=99.85  E-value=8.2e-21  Score=140.87  Aligned_cols=112  Identities=38%  Similarity=0.583  Sum_probs=97.2

Q ss_pred             EEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           33 IVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        33 litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      +|||+++|||++++++|+++| ++|++++|+.+..+++..++...  +.++.++.+|++|.+++.++++++.++++++|+
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~   78 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMP--KDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDV   78 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCC--CCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCE
Confidence            699999999999999999999 99999999877666666665432  457888999999999999999999988899999


Q ss_pred             EEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          112 LINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       112 lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ||||||+..   +..+.+.++|++.|++|+.|++++++
T Consensus        79 lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  116 (308)
T PLN00015         79 LVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSR  116 (308)
T ss_pred             EEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999853   23467889999999999999999875

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.6e-20  Score=135.61  Aligned_cols=115  Identities=19%  Similarity=0.259  Sum_probs=96.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.+|+++|||+++|||.+++++|+++|++|+++++..+   +..+++...    .+.++.+|++|++++.++++++.+
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~---~~~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~   75 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE---NEAKELREK----GVFTIKCDVGNRDQVKKSKEVVEK   75 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH---HHHHHHHhC----CCeEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998876543   222333322    467889999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (255)
T PRK06463         76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTY  119 (255)
T ss_pred             HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHH
Confidence            9999999999999753  34467889999999999999988764

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.4e-20  Score=134.97  Aligned_cols=117  Identities=26%  Similarity=0.377  Sum_probs=100.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.+.. +.++.++.+|+++++++.+++++   
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH-GVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhc-CCceEEEEecCCCHHHHHHHHHH---
Confidence            35789999999999999999999999999999999999877777777776543 45788899999999999888764   


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++++|++|||+|...  +..+.+.++|++.+++|+.+++++++
T Consensus        79 -~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (259)
T PRK06125         79 -AGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTR  121 (259)
T ss_pred             -hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence             478999999999753  34478999999999999999998875

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.3e-20  Score=136.32  Aligned_cols=115  Identities=26%  Similarity=0.284  Sum_probs=98.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++++|||+++|||.+++++|+++|++|++++|+.+..++..+++...   .++.++.+|+++++++.++++++.++++.
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~   78 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKA---ARVSVYAADVRDADALAAAAADFIAAHGL   78 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccC---CeeEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            478999999999999999999999999999999876666555554322   27889999999999999999999999999


Q ss_pred             ccEEEEccccCCCC--C-CCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASP--F-MLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~--~-~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|.....  . ..+.++++..+++|+.|++++++
T Consensus        79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  119 (257)
T PRK07024         79 PDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQ  119 (257)
T ss_pred             CCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHH
Confidence            99999999976421  2 26778999999999999998764

>PRK12743 oxidoreductase; Provisional

Probab=99.85  E-value=1.8e-20  Score=135.45  Aligned_cols=117  Identities=21%  Similarity=0.311  Sum_probs=100.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++|+++|||+++|||.+++++|+++|++|+++++ +.+..+.+.+++...  +.++.++.+|+++.+++.++++++.+.+
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   78 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH--GVRAEIRQLDLSDLPEGAQALDKLIQRL   78 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999998865 444455666666554  5688999999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||+|....  ..+.+.+++++.+++|+.+++++++
T Consensus        79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (256)
T PRK12743         79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQ  120 (256)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999997642  3467889999999999999999875

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.85  E-value=9.7e-21  Score=141.25  Aligned_cols=118  Identities=25%  Similarity=0.370  Sum_probs=95.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC--HHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS--LASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~  104 (147)
                      ..|++++|||+++|||+++|++|+++|++|++++|++++++++.+++.+.+++.++..+.+|+++  .+.+..+.+.+. 
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~-  129 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE-  129 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc-
Confidence            45899999999999999999999999999999999998888888888766545678889999985  333444433321 


Q ss_pred             cCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ...+|++|||||+..    +..+.+.+++++.+++|+.|++++++
T Consensus       130 -~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  174 (320)
T PLN02780        130 -GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQ  174 (320)
T ss_pred             -CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHH
Confidence             124679999999863    23467889999999999999998875

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=2.8e-20  Score=133.55  Aligned_cols=118  Identities=29%  Similarity=0.327  Sum_probs=102.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++++++|||++++||.+++++|+++|++|++++|+.+..+.+...+..   +.++.++.+|++|++++.++++++..+
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA---GGRAIAVAADVSDEADVEAAVAAALER   78 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999998766666665543   357889999999999999999999889


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...   +..+.+.+++++.+++|+.|++.+++
T Consensus        79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  122 (251)
T PRK07231         79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQ  122 (251)
T ss_pred             hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999753   23467889999999999999988765

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.85  E-value=2.3e-20  Score=133.87  Aligned_cols=118  Identities=18%  Similarity=0.164  Sum_probs=98.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++|+++|||++++||++++++|+++|++|++.. ++....++..+++...  +.++..+.+|++|.+++.++++++.+.
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL--GFDFIASEGNVGDWDSTKAAFDKVKAE   78 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999988754 4444444455555443  567888899999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||...  +..+.+.+++++.+++|+.+++.+++
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (246)
T PRK12938         79 VGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTK  121 (246)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999764  23467889999999999999998765

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.1e-20  Score=134.19  Aligned_cols=119  Identities=22%  Similarity=0.263  Sum_probs=98.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc----cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA----AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+++|+++|||+++|||.++|+.|+++|++|+++.++.+    ..++..+++...  +.++.++.+|+++++++.+++++
T Consensus         5 ~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          5 SLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA--GAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh--CCcEEEEecCcCCHHHHHHHHHH
Confidence            467899999999999999999999999999777665432    234444455443  45788899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+.++++|++|||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  129 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIK  129 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHH
Confidence            9999999999999999753  33467889999999999999998765

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.85  E-value=2.3e-20  Score=135.48  Aligned_cols=111  Identities=27%  Similarity=0.353  Sum_probs=96.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||.+++++|+++|++|++++++.....           ..++.++.+|+++++++.++++++.+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~~~~~~   73 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-----------HENYQFVPTDVSSAEEVNHTVAEIIE   73 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-----------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998865422           23677889999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-----------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-----------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-----------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||...+           ..+.+.++|++.+++|+.|++++++
T Consensus        74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (266)
T PRK06171         74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQ  126 (266)
T ss_pred             HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHH
Confidence            99999999999997532           1257889999999999999999875

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.85  E-value=3.4e-20  Score=133.78  Aligned_cols=120  Identities=29%  Similarity=0.468  Sum_probs=104.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||++++||.+++++|+++|++|++++|+.++.+++..++...  +.++.++.+|+++.+++.++++++.+
T Consensus         5 ~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          5 INLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE--GGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999999999987777777766554  45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.++++.++++|+.+++.+++
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (258)
T PRK06949         83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQ  126 (258)
T ss_pred             hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHH
Confidence            9999999999999753  23456788999999999999988764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.85  E-value=1.8e-20  Score=135.64  Aligned_cols=113  Identities=19%  Similarity=0.160  Sum_probs=98.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||+++|||++++++|+++|++|++++|+.+..++..+++.+.   .++.++.+|++|++++.++++++.++++++|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id   78 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY---GEVYAVKADLSDKDDLKNLVKEAWELLGGID   78 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999999987777777777543   3678899999999999999999999999999


Q ss_pred             EEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||||||...    +..+.+.++|.+.+++|+.+++++++
T Consensus        79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  118 (259)
T PRK08340         79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTT  118 (259)
T ss_pred             EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHH
Confidence            9999999752    23467788999999999999887653

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.2e-20  Score=136.51  Aligned_cols=115  Identities=23%  Similarity=0.284  Sum_probs=98.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +.+++++|||++||||++++++|+++|++|++++|+.+..+.+..    .. +.++..+.+|++|.+++.++++.+.+.+
T Consensus         2 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~----~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~   76 (277)
T PRK06180          2 SSMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEA----LH-PDRALARLLDVTDFDAIDAVVADAEATF   76 (277)
T ss_pred             CCCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHh----hc-CCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999998665443322    22 3468888999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  118 (277)
T PRK06180         77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTK  118 (277)
T ss_pred             CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999753  34467889999999999999998765

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.85  E-value=3.3e-20  Score=133.68  Aligned_cols=118  Identities=26%  Similarity=0.249  Sum_probs=103.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|+++|||++++||.+++++|+++|++|++++|+.+..+....++...  +.++..+.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   79 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA--GGKAIGVAMDVTDEEAINAGIDYAVETF   79 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999987777777777654  5678899999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||||...  +..+.+.++++..+++|+.+++++++
T Consensus        80 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (258)
T PRK12429         80 GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTK  121 (258)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHH
Confidence            99999999999753  23467888999999999999888764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.9e-20  Score=134.41  Aligned_cols=112  Identities=22%  Similarity=0.275  Sum_probs=96.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ...+++|++||||+++|||.+++++|+++|++|++++|+.+..         .  ..++.++.+|++|++++.++++++.
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------L--PEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------c--CCceeEEecCCCCHHHHHHHHHHHH
Confidence            3457899999999999999999999999999999999975421         1  3467889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|++|||||...    +..+.+.++|++.+++|+.|++++++
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDR  119 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHH
Confidence            99999999999999642    23457889999999999999988764

>PRK05599 hypothetical protein; Provisional

Probab=99.84  E-value=2.3e-20  Score=134.39  Aligned_cols=115  Identities=16%  Similarity=0.240  Sum_probs=97.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||+++|||+++|++|+ +|++|++++|+.+.++++.+++++.. +.++.++.+|++|++++.++++++.+.+|++
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   78 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRG-ATSVHVLSFDAQDLDTHRELVKQTQELAGEI   78 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcc-CCceEEEEcccCCHHHHHHHHHHHHHhcCCC
Confidence            479999999999999999999 59999999999888888888876542 2357889999999999999999999999999


Q ss_pred             cEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||||+..+  ..+.+.+++.+.+++|+.+++++++
T Consensus        79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (246)
T PRK05599         79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLT  117 (246)
T ss_pred             CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHH
Confidence            999999998643  2256667788899999999887653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.84  E-value=2.9e-20  Score=132.72  Aligned_cols=111  Identities=19%  Similarity=0.226  Sum_probs=94.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|++||||+++|||.+++++|+++|++|++++|+++..   .+.+...  +  +.++.+|++|++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~~~--~--~~~~~~D~~~~~~~~~~~~~~~~~~~~   74 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPA---IDGLRQA--G--AQCIQADFSTNAGIMAFIDELKQHTDG   74 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHHc--C--CEEEEcCCCCHHHHHHHHHHHHhhCCC
Confidence            58999999999999999999999999999999986532   2333332  2  567899999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||||...  ...+.+.++|++.+++|+.+++++++
T Consensus        75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~  114 (236)
T PRK06483         75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNL  114 (236)
T ss_pred             ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHH
Confidence            999999999753  23466789999999999999998764

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.7e-20  Score=134.22  Aligned_cols=117  Identities=25%  Similarity=0.253  Sum_probs=101.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++++|||++++||.+++++|+++|++|++++|+.+..+++..++ ..  +.++.++.+|++|++++.++++.+.+ 
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~--~~~~~~~~~D~~d~~~~~~~~~~~~~-   77 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PY--PGRHRWVVADLTSEAGREAVLARARE-   77 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hc--CCceEEEEccCCCHHHHHHHHHHHHh-
Confidence            467899999999999999999999999999999999977777666666 22  45788999999999999999998876 


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  120 (263)
T PRK09072         78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTR  120 (263)
T ss_pred             cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            789999999999753  23467889999999999999998765

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.2e-20  Score=135.06  Aligned_cols=115  Identities=21%  Similarity=0.232  Sum_probs=102.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||+++|||++++++|+++|++|++++|+.+..+++..++...  +.++.++.+|+++++++.++++.+...++++
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   78 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA--GGDGFYQRCDVRDYSQLTALAQACEEKWGGI   78 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47999999999999999999999999999999988777777777665  5678899999999999999999999999999


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||...  ...+.+.+++++.+++|+.+++.+++
T Consensus        79 d~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (270)
T PRK05650         79 DVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCK  117 (270)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            99999999764  34467889999999999999998765

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.3e-20  Score=132.18  Aligned_cols=117  Identities=21%  Similarity=0.233  Sum_probs=101.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++|+++|||++++||..++++|+++|++|++++|+++..+++.+.+...  +.++.++.+|+++++++.++++.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST--GVKAAAYSIDLSNPEAIAPGIAELLEQFG   82 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4589999999999999999999999999999999877666666666543  46788999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||+|....  ..+.+.+++++.+++|+.+++++++
T Consensus        83 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  123 (241)
T PRK07454         83 CPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCS  123 (241)
T ss_pred             CCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999997542  3356788999999999999998765

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=4.6e-20  Score=133.23  Aligned_cols=119  Identities=26%  Similarity=0.316  Sum_probs=98.4

Q ss_pred             CCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccC-----------ccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           26 DATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNM-----------AAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        26 ~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .+++|+++|||+++  |||.+++++|+++|++|++++|++           .....+..++...  +.++.++.+|++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~   79 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY--GVRCEHMEIDLSQP   79 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc--CCeEEEEECCCCCH
Confidence            46789999999994  999999999999999999999872           1111233444333  45789999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++.+.++++|++|||||+..  +..+.+++++++.+++|+.|++++++
T Consensus        80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  135 (256)
T PRK12748         80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSS  135 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999753  33467889999999999999998764

>TIGR02415 23BDH acetoin reductases

Probab=99.84  E-value=3.7e-20  Score=133.28  Aligned_cols=115  Identities=23%  Similarity=0.285  Sum_probs=101.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||++++||.+++++|++.|++|++++|+.+..++..+++...  +.++..+.+|++|++++.++++.+.++++++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   78 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA--GGKAVAYKLDVSDKDQVFSAIDQAAEKFGGF   78 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            68999999999999999999999999999999877666666766654  5678899999999999999999999999999


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        79 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (254)
T TIGR02415        79 DVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQ  117 (254)
T ss_pred             CEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            99999999753  34478889999999999999987654

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.84  E-value=3.1e-20  Score=135.50  Aligned_cols=114  Identities=25%  Similarity=0.260  Sum_probs=98.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+|+++|||++++||++++++|+++|++|++++|+.+..+++.+.+     +.++..+.+|++|++++.++++.+.+.++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   76 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY-----GDRLLPLALDVTDRAAVFAAVETAVEHFG   76 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----cCCeeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            5689999999999999999999999999999999876554443322     34677889999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||||...  +..+.+.+++++.+++|+.+++++++
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  117 (275)
T PRK08263         77 RLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQ  117 (275)
T ss_pred             CCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999764  34467889999999999999988765

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.84  E-value=4.6e-20  Score=134.49  Aligned_cols=121  Identities=20%  Similarity=0.135  Sum_probs=103.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||++++||.+++++|+++|++|++++|+.+..+...+++.....+.++.++.+|++|++++.++++++.+.
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999987766666666654322357888999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...   +..+.+.++++..+++|+.+++++++
T Consensus        84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (276)
T PRK05875         84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLK  127 (276)
T ss_pred             cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999653   34467888999999999999988764

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.84  E-value=4.5e-20  Score=132.02  Aligned_cols=116  Identities=26%  Similarity=0.363  Sum_probs=99.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++++++|||++++||++++++|+++|+.|++.+|+.+..++....+     +.++.++.+|+++.+++.++++++.++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   77 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL-----GERVKIFPANLSDRDEVKALGQKAEAD   77 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            577899999999999999999999999999999888766555444333     356788899999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...+  ..+.+.+++++.+++|+.+++++++
T Consensus        78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (245)
T PRK12936         78 LEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTR  120 (245)
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHH
Confidence            9999999999997642  3467788999999999999998765

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.5e-20  Score=131.29  Aligned_cols=119  Identities=28%  Similarity=0.343  Sum_probs=101.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||++++||+++++.|+++|++|+++.++.+ ..++..+++...  +.++.++.+|+++.+++.++++++.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA--GGRAIAVQADVADAAAVTRLFDAAET   79 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999988877543 344455555544  56889999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||...  +..+.+.++++.++++|+.+++.+++
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  123 (245)
T PRK12937         80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLR  123 (245)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHH
Confidence            9999999999999754  23467889999999999999988764

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=4.6e-20  Score=126.02  Aligned_cols=116  Identities=20%  Similarity=0.227  Sum_probs=92.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||.++++.|++.|++|++++|+.+..++..+++.+.  +.+..++.+|+++++++.++++++.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~v~~~~~   89 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL--GGEALFVSYDMEKQGDWQRVISITLN   89 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999877666666666643  45677889999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CC-CCCHHHHHHhhhhhhhhhhhhc
Q 044688          105 KGLPLNILINNAGIMAS--PF-MLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~-~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+|++|++|||||+...  .. +.++++ +.  .+|+.++++.+
T Consensus        90 ~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~  130 (169)
T PRK06720         90 AFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEI  130 (169)
T ss_pred             HcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHH
Confidence            99999999999998642  22 224334 44  55555554443

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.84  E-value=7.4e-20  Score=131.32  Aligned_cols=119  Identities=25%  Similarity=0.335  Sum_probs=100.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||++++||.+++++|+++|++|+++.+ +++..++..+++...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE--GHDVYAVQADVSKVEDANRLVEEAVN   80 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999987654 344455555566543  56799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||....  ..+.+.+.+++.+++|+.+++++++
T Consensus        81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  124 (247)
T PRK12935         81 HFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTS  124 (247)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999997643  2356779999999999999998765

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.84  E-value=5.2e-20  Score=132.15  Aligned_cols=118  Identities=29%  Similarity=0.300  Sum_probs=102.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++++||||++++||.+++++|+++|++|++++|+.+...++.+++...  +.++.++.+|+++.+++.++++++.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~   78 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK--GGNAQAFACDITDRDSVDTAVAAAEQAL   78 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999877766666666554  5678899999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (250)
T TIGR03206        79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHH  120 (250)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999753  23467888999999999999998754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.9e-20  Score=133.82  Aligned_cols=119  Identities=27%  Similarity=0.310  Sum_probs=101.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +.+|+++|||+++++|.++++.|+++|++|++++|+.+..++..+.+.....+.++.++.+|++|++++.+ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            35789999999999999999999999999999999877766666655543223578899999999999999 99998899


Q ss_pred             CCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||+|...+  ..+.+.+++++.+++|+.|++.+++
T Consensus        80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (280)
T PRK06914         80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQ  121 (280)
T ss_pred             CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999997642  3467889999999999999988764

>PRK06182 short chain dehydrogenase; Validated

Probab=99.84  E-value=4.3e-20  Score=134.63  Aligned_cols=111  Identities=32%  Similarity=0.413  Sum_probs=95.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++|+++|||+++|||++++++|+++|++|++++|+.+++.++    ..    ..+.++.+|++|.+++.++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~----~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~   73 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL----AS----LGVHPLSLDVTDEASIKAAVDTIIAEEG   73 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh----CCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            579999999999999999999999999999999986544322    22    2367889999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||||+..  +..+.+.++++..+++|+.|++.+++
T Consensus        74 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  114 (273)
T PRK06182         74 RIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQ  114 (273)
T ss_pred             CCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHH
Confidence            9999999999763  34577899999999999999887664

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.84  E-value=8e-20  Score=131.71  Aligned_cols=117  Identities=25%  Similarity=0.345  Sum_probs=98.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.+|+++|||++++||.+++++|+++|++|++++|+.+. .....++.    +.++.++.+|+++++++.++++++.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~~   85 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL----GGNAKGLVCDVSDSQSVEAAVAAVIS   85 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999998643 22222221    34677899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.+++++.+++|+.|++++++
T Consensus        86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  129 (255)
T PRK06841         86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQ  129 (255)
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHH
Confidence            9999999999999763  23367889999999999999998875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.84  E-value=6.6e-20  Score=148.28  Aligned_cols=122  Identities=26%  Similarity=0.312  Sum_probs=105.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|++||||+++|||++++++|+++|++|++++|+.+..+...+++....+..++..+.+|++|++++.++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998777776666665543334678899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||+..  +..+.+.++|+..+++|+.+++++++
T Consensus       490 ~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~  533 (676)
T TIGR02632       490 AYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAR  533 (676)
T ss_pred             hcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999764  33467889999999999999988754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.84  E-value=9.5e-20  Score=130.82  Aligned_cols=119  Identities=19%  Similarity=0.191  Sum_probs=102.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++.+++++|||++++||..+++.|+++|++|++++|+.++.+...+++...  +.++..+.+|+++.+++.++++.+.+.
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL--GTEVRGYAANVTDEEDVEATFAQIAED   79 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999887777666666554  567888999999999999999999888


Q ss_pred             CCCccEEEEccccCCCC-----------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASP-----------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...+.           .+.+.++++..+++|+.|++++++
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (253)
T PRK08217         80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGR  131 (253)
T ss_pred             cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            89999999999964321           356788999999999999987754

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.84  E-value=6.7e-20  Score=133.57  Aligned_cols=116  Identities=26%  Similarity=0.326  Sum_probs=100.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||.+++++|+++|++|++++|+.+..++..+++.... +..+.++.+|+++++++.++++++.+.++++
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM   79 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            579999999999999999999999999999998877777777776541 2335567899999999999999999999999


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||+|...  +..+.+.++++..+++|+.|++.+++
T Consensus        80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (272)
T PRK07832         80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIE  118 (272)
T ss_pred             CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999753  34578999999999999999999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.83  E-value=9.4e-20  Score=131.66  Aligned_cols=119  Identities=26%  Similarity=0.341  Sum_probs=102.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||++++||..++++|+++|++ |++++|+.+......+++.+.  +.++.++.+|+++++++.++++.+.+
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL--GAKAVFVQADLSDVEDCRRVVAAADE   80 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            478899999999999999999999999998 999999876666666666443  56788899999999999999999998


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|....  ..+.+.++++..+++|+.|++++++
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  124 (260)
T PRK06198         81 AFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQ  124 (260)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            89999999999997642  3367889999999999999998754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.83  E-value=1.1e-19  Score=131.36  Aligned_cols=116  Identities=28%  Similarity=0.336  Sum_probs=98.0

Q ss_pred             EEEEecCCCchhHHHHHHHHH----CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           31 TAIVTGASSGIGAETTRVLAL----RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|||+++|||++++++|++    +|++|++++|+.+.++++.+++....++.++.++.+|+++.+++.++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999988888888888764445678899999999999999999998877


Q ss_pred             CCc----cEEEEccccCCC---CC-C-CCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPL----NILINNAGIMAS---PF-M-LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~i----d~lv~~ag~~~~---~~-~-~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+    |+||||||....   .. + .+.+++++.+++|+.|++++++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  130 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTS  130 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHH
Confidence            653    699999997532   11 2 2468899999999999998875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=9.4e-20  Score=131.02  Aligned_cols=116  Identities=21%  Similarity=0.256  Sum_probs=95.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||+++|||+++++.|+++|++|+++.++ .+..+.+..++     +.++.++.+|+++++++.++++++.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   76 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL-----GDRAIALQADVTDREQVQAMFATATE   76 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999887654 33223322222     35788899999999999999999988


Q ss_pred             cCCC-ccEEEEccccC--------CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLP-LNILINNAGIM--------ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~-id~lv~~ag~~--------~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++ +|++|||||..        .+..+.+.+++++.+++|+.+++++++
T Consensus        77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (253)
T PRK08642         77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQ  127 (253)
T ss_pred             HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHH
Confidence            8887 99999999863        123467889999999999999999875

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-19  Score=130.12  Aligned_cols=120  Identities=23%  Similarity=0.281  Sum_probs=101.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC--HHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS--LASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~  103 (147)
                      .+.+|+++|||+++|||.++++.|+++|++|++++|+.+..+...+++.+.. +..+.++.+|+++  .+++.++++++.
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAG-HPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcC-CCCcceEEeeecccchHHHHHHHHHHH
Confidence            4778999999999999999999999999999999999887777777765432 3457788999975  568899999998


Q ss_pred             hcC-CCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKG-LPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~-~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+ +++|++|||||...   +..+.+.+++++.+++|+.|++++++
T Consensus        82 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  128 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTR  128 (239)
T ss_pred             HHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHH
Confidence            888 78999999999753   34568889999999999999998865

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1e-19  Score=131.57  Aligned_cols=113  Identities=26%  Similarity=0.243  Sum_probs=97.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK-GLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~  108 (147)
                      |+++|||++++||++++++|+++|++|++++|+.+..+++...+.    +.++.++.+|+++.+++.++++.+.+. +++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~   77 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG----AGNAWTGALDVTDRAAWDAALADFAAATGGR   77 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            789999999999999999999999999999998766555544432    457889999999999999999988776 789


Q ss_pred             ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||....  ..+.+.++++..+++|+.|++++++
T Consensus        78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  117 (260)
T PRK08267         78 LDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAH  117 (260)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999997642  3467889999999999999998865

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=130.41  Aligned_cols=116  Identities=29%  Similarity=0.323  Sum_probs=97.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++||||++++||.+++++|+++|++|++++++ ++...+....+...  +.++.++.+|++|.+++.++++++.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ--GGEALAVAADVADEADVLRLFEAVDRELG   79 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC--CCcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999998888754 34444555555443  45688899999999999999999999999


Q ss_pred             CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||...   +..+.+.++|+..+++|+.+++++++
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (248)
T PRK06123         80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAR  121 (248)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999764   23367889999999999999988754

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.5e-19  Score=130.19  Aligned_cols=119  Identities=29%  Similarity=0.346  Sum_probs=98.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++++++|||++++||.+++++|+++|++|+++ .|+.+..++..+.+...  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            3678999999999999999999999999998775 67665555555555443  45788899999999999999999988


Q ss_pred             cC------CCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KG------LPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~------~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++      +++|++|||||....  ..+.+.+.++..+++|+.|++++++
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  130 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQ  130 (254)
T ss_pred             HhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            76      579999999997542  3467889999999999999988765

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.83  E-value=1.8e-19  Score=129.27  Aligned_cols=119  Identities=24%  Similarity=0.263  Sum_probs=103.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++++|.+++++|+++|++|++++|+.+......+.+...  +.++.++.+|++|.+++.++++++.++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA--GGKARARQVDVRDRAALKAAVAAGVED   80 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999977766666766654  456889999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+|++|||+|....  ..+.+.++++..+++|+.+++.+.+
T Consensus        81 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  123 (251)
T PRK12826         81 FGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQ  123 (251)
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999987642  3367889999999999999988764

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=132.97  Aligned_cols=108  Identities=24%  Similarity=0.285  Sum_probs=92.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++ +++++
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~   76 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA--GFDVSTQEVDVSSRESVKALAATA-QTLGP   76 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEeecCCHHHHHHHHHHH-HhcCC
Confidence            689999998 699999999996 8999999999877766666666543  567889999999999999999987 56899


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||+..     ..++++..+++|+.|++++++
T Consensus        77 id~li~nAG~~~-----~~~~~~~~~~vN~~g~~~l~~  109 (275)
T PRK06940         77 VTGLVHTAGVSP-----SQASPEAILKVDLYGTALVLE  109 (275)
T ss_pred             CCEEEECCCcCC-----chhhHHHHHHHhhHHHHHHHH
Confidence            999999999752     236789999999999999875

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=1.5e-19  Score=130.19  Aligned_cols=116  Identities=22%  Similarity=0.265  Sum_probs=98.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +|+++|||++++||.+++++|+++|++|++++|+. +..+...+.++..  +.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL--GVEVIFFPADVADLSAHEAMLDAAQAAWG   79 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999864 3344445555443  45788999999999999999999999999


Q ss_pred             CccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||+|...    +..+.+.+.+++.+++|+.+++++++
T Consensus        80 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  122 (256)
T PRK12745         80 RIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ  122 (256)
T ss_pred             CCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHH
Confidence            9999999999753    23357889999999999999988764

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2e-19  Score=131.29  Aligned_cols=119  Identities=26%  Similarity=0.334  Sum_probs=101.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+..|+++|||++++||.+++++|+++|++|++++|+.+...+....+...  +.++.++.+|+++++++.++++++.+.
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   84 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD--GGEAVAFPLDVTDPDSVKSFVAQAEEA   84 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            366789999999999999999999999999999999876655555555443  467888999999999999999999888


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...  +..+.+++.++..+++|+.|++++++
T Consensus        85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (274)
T PRK07775         85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLAT  127 (274)
T ss_pred             cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            899999999999754  33467889999999999999998764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=1.9e-20  Score=138.34  Aligned_cols=122  Identities=16%  Similarity=0.168  Sum_probs=87.1

Q ss_pred             CCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccC--------ccchHHHHHHHhhCCCC-----eeEEEEec
Q 044688           24 GIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNM--------AAGTDVKDAIVKEIPTA-----KVDVLELD   88 (147)
Q Consensus        24 ~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~--------~~~~~~~~~l~~~~~~~-----~~~~~~~D   88 (147)
                      ..+++||+++|||++  +|||+++|+.|+++|++|++.++.+        ...++.... .....+.     ++..+.+|
T Consensus         3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDAS-RKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhccccccccc-ccccccchhhhhhHHHhhhh
Confidence            457899999999996  9999999999999999999987542        000000000 0000001     11112223


Q ss_pred             CCCH------------------HHHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 LSSL------------------ASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ~~~~------------------~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.                  +++.++++++.+++|++|+||||||+.    .+..+.+.++|++++++|+.|+++++|
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3222                  468999999999999999999999864    244578999999999999999999876

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-19  Score=130.39  Aligned_cols=117  Identities=14%  Similarity=0.123  Sum_probs=96.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++|||+++|||+++|++|+++| ++|++++|+++. ++++.+++.... +.++.++.+|++|.+++.++++++.+ 
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~-   84 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAG-ASSVEVIDFDALDTDSHPKVIDAAFA-   84 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcC-CCceEEEEecCCChHHHHHHHHHHHh-
Confidence            46899999999999999999999985 899999999876 777777776642 34788999999999999999998876 


Q ss_pred             CCCccEEEEccccCCCCC--CCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPF--MLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...+..  ..++++..+.+++|+.|++++++
T Consensus        85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  127 (253)
T PRK07904         85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGV  127 (253)
T ss_pred             cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHH
Confidence            589999999999864322  22445566789999999998654

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.1e-19  Score=132.23  Aligned_cols=109  Identities=35%  Similarity=0.436  Sum_probs=94.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++++|||++|+||.+++++|+++|++|++++|+.+....          ...+.++.+|++|++++.++++.+.+.++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   72 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP----------IPGVELLELDVTDDASVQAAVDEVIARAG   72 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----------cCCCeeEEeecCCHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999999998543221          23577899999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||||+..  +..+.+.++++..+++|+.|++++++
T Consensus        73 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  113 (270)
T PRK06179         73 RIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTR  113 (270)
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999763  34467889999999999999988765

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.82  E-value=2.7e-19  Score=128.69  Aligned_cols=119  Identities=32%  Similarity=0.415  Sum_probs=99.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc--chHHHHHHHhhCCC-CeeEEEEecCCC-HHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA--GTDVKDAIVKEIPT-AKVDVLELDLSS-LASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~  101 (147)
                      ++.+++++|||+++|||+++|+.|+++|++|+++.++.+.  .+.+.+... . .+ ..+.+..+|+++ .+++..+++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dvs~~~~~v~~~~~~   79 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK-E-AGGGRAAAVAADVSDDEESVEALVAA   79 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH-h-cCCCcEEEEEecCCCCHHHHHHHHHH
Confidence            4788999999999999999999999999998888887554  233333332 1 12 368888899998 9999999999


Q ss_pred             HHhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +...+|++|++|||||+..   +..+.+.+++++++++|+.|++.+++
T Consensus        80 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  127 (251)
T COG1028          80 AEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTR  127 (251)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHH
Confidence            9999999999999999874   45578889999999999999998764

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.82  E-value=1.8e-19  Score=129.68  Aligned_cols=112  Identities=23%  Similarity=0.372  Sum_probs=96.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||++++||.+++++|+++|++|++++|+++.++.+.+.+     +.++.++.+|+++.+++.++++++.++++++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~i   75 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWRNI   75 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----ccceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            36899999999999999999999999999999876555444433     3468889999999999999999999999999


Q ss_pred             cEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||||...   +..+.+.+++++.+++|+.|++.+++
T Consensus        76 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  115 (248)
T PRK10538         76 DVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTR  115 (248)
T ss_pred             CEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999752   34467889999999999999988765

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.82  E-value=2.1e-19  Score=128.98  Aligned_cols=116  Identities=29%  Similarity=0.329  Sum_probs=97.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|+++|||+++|||..+++.|+++|++|+++. |+.+..+....++...  +.++.++.||+++.+++.++++++.+.++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   79 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA--GGRACVVAGDVANEADVIAMFDAVQSAFG   79 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999998765 4555555555556543  45789999999999999999999998899


Q ss_pred             CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||||...   +..+.+.++++..+++|+.+++++++
T Consensus        80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (248)
T PRK06947         80 RLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAR  121 (248)
T ss_pred             CCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHH
Confidence            9999999999753   23467889999999999999988764

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3e-19  Score=127.34  Aligned_cols=118  Identities=24%  Similarity=0.277  Sum_probs=102.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|||++|+||.+++++|+++|++|++++|++++..++.+++...   .++.++.+|+++.+++.++++++.+.
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK---GNVLGLAADVRDEADVQRAVDAIVAA   79 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc---CcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999887766666666542   46888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  +..+.+.++++..+++|+.+++++++
T Consensus        80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (237)
T PRK07326         80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIK  122 (237)
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHH
Confidence            999999999998753  23467889999999999999998764

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.1e-19  Score=131.36  Aligned_cols=111  Identities=24%  Similarity=0.317  Sum_probs=93.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG-  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  106 (147)
                      .+|+++|||+++|||++++++|+++|++|++++|+.+.++++    ..    ..+.++.+|++|.+++.++++++.+.+ 
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l----~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   74 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL----EA----EGLEAFQLDYAEPESIAALVAQVLELSG   74 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH----CCceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999999999999999999999999999999986654433    22    136678999999999999999987665 


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||||+..  +..+.+.++++..+++|+.|++.+++
T Consensus        75 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  116 (277)
T PRK05993         75 GRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTR  116 (277)
T ss_pred             CCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHH
Confidence            68999999999764  34467889999999999999887654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2e-19  Score=131.24  Aligned_cols=113  Identities=32%  Similarity=0.344  Sum_probs=96.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|++||||++|+||.+++++|+++|++|++++|+.+..+++.+..     +.++.++.+|++|.+++.++++++.+.+++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY-----GDRLWVLQLDVTDSAAVRAVVDRAFAALGR   76 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999865544433322     346888999999999999999999888899


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        77 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  116 (276)
T PRK06482         77 IDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIR  116 (276)
T ss_pred             CCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999764  33356788999999999999998765

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.9e-19  Score=127.86  Aligned_cols=119  Identities=29%  Similarity=0.359  Sum_probs=103.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||++++||.+++++|+++|++|+++ .|+.+..+...+.+...  +.++.++.+|+++++++.++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE--GGDAIAVKADVSSEEDVENLVEQIVE   79 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 88877666666666553  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  123 (247)
T PRK05565         80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTR  123 (247)
T ss_pred             HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            8999999999999763  23367889999999999999988764

>PRK09135 pteridine reductase; Provisional

Probab=99.82  E-value=4.3e-19  Score=127.11  Aligned_cols=120  Identities=19%  Similarity=0.215  Sum_probs=99.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.++++||||++++||+.++++|+++|++|++++|+. +..+.....+.... ...+.++.+|+++.+++.++++++.+
T Consensus         3 ~~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   81 (249)
T PRK09135          3 TDSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALR-PGSAAALQADLLDPDALPELVAACVA   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999864 33444444454332 34678899999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||||....  ..+.+.++++..+++|+.|++++.+
T Consensus        82 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  125 (249)
T PRK09135         82 AFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQ  125 (249)
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHH
Confidence            99999999999997542  3356778899999999999998865

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.82  E-value=2.8e-19  Score=129.10  Aligned_cols=114  Identities=24%  Similarity=0.236  Sum_probs=95.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||+++|||.+++++|+++|++|++++|+....++..+++     +  ..++.+|+++++++.++++++.+.
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~   76 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV-----G--GLFVPTDVTDEDAVNALFDTAAET   76 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc-----C--CcEEEeeCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999865544443333     1  246789999999999999999988


Q ss_pred             CCCccEEEEccccCCC----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...+    ..+.+.+.+++.+++|+.|++++++
T Consensus        77 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (255)
T PRK06057         77 YGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCK  121 (255)
T ss_pred             cCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHH
Confidence            9999999999997532    2356788999999999999998765

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.82  E-value=3.8e-19  Score=128.80  Aligned_cols=116  Identities=26%  Similarity=0.297  Sum_probs=100.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++++|||++++||.++++.|+++|++|++++|+.+..+++.+.+...  +.++.++.+|++|.+++.++++++.+++++
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTDVSDAEACERLIEAAVARFGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            478999999999999999999999999999999877666666666554  457888999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CCCC-CHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFML-SKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~-~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|....  ..+. +.+++++.+++|+.+++++++
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  119 (263)
T PRK06181         79 IDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTH  119 (263)
T ss_pred             CCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999997542  2345 788999999999999998764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.82  E-value=3.6e-19  Score=127.85  Aligned_cols=115  Identities=22%  Similarity=0.189  Sum_probs=96.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||++++||.++++.|+++|++|++++|+ .+..+++.+.+........+..+.+|++|++++.++++++.++++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            7999999999999999999999999999998 555666666665442223456788999999999999999999999999


Q ss_pred             EEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|||||...  +..+.+.+++++++++|+.+++.+++
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (251)
T PRK07069         82 VLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCK  119 (251)
T ss_pred             EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999764  33467889999999999998887654

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.82  E-value=5e-19  Score=126.39  Aligned_cols=119  Identities=29%  Similarity=0.344  Sum_probs=102.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++.+++++|||++++||..+++.|+++|++|++++|+++..+.....+...  +.++.++.+|+++++++.++++++...
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA--GGEARVLVFDVSDEAAVRALIEAAVEA   79 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999987766666666544  567889999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++||++|....  ..+.+.++++..++.|+.+++++++
T Consensus        80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  122 (246)
T PRK05653         80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVR  122 (246)
T ss_pred             hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            8999999999997542  3467888999999999999988754

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=3.7e-19  Score=127.80  Aligned_cols=120  Identities=21%  Similarity=0.201  Sum_probs=102.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~  103 (147)
                      .+++|+++|||++++||.+++++|++.|++|++++|+.+..+++..++.... ..++.++.+|++  +.+++.++++.+.
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   87 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAG-GPQPAIIPLDLLTATPQNYQQLADTIE   87 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcC-CCCceEEEecccCCCHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999999877777777776542 346677778886  7899999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|+||||||...   +..+.+.+.++..+++|+.|++++++
T Consensus        88 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  133 (247)
T PRK08945         88 EQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQ  133 (247)
T ss_pred             HHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            99999999999999753   23467889999999999999988765

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.81  E-value=4.5e-19  Score=127.05  Aligned_cols=119  Identities=24%  Similarity=0.239  Sum_probs=98.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC----ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM----AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+.+++++|||++++||++++++|+++|++|++++|..    +..+++..++...  +.++.++.+|+++.+++.+++++
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          3 SLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA--GGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            36689999999999999999999999999999877643    2333344444433  45788999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+.++++|++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  127 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQ  127 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence            9998899999999999764  33467889999999999999998875

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.81  E-value=5.2e-19  Score=127.18  Aligned_cols=111  Identities=29%  Similarity=0.413  Sum_probs=97.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||++++||.+++++|+++|++|++++|+.         +...  +.++.++.+|+++++++.++++++.+
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQE--DYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            458899999999999999999999999999999999875         1111  45788899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  116 (252)
T PRK08220         73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFR  116 (252)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999753  34467889999999999999998865

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.81  E-value=5.9e-19  Score=125.62  Aligned_cols=119  Identities=20%  Similarity=0.230  Sum_probs=100.6

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.+++|++||||++++||..++++|+++|++|++++|+.+...+...++...    ....+.+|++|.+++.++++++.
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~   77 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD----ALRIGGIDLVDPQAARRAVDEVN   77 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc----CceEEEeecCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999877666555555432    35677899999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++||++|...  +..+.+.+++++.+++|+.+++.+++
T Consensus        78 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  122 (239)
T PRK12828         78 RQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASK  122 (239)
T ss_pred             HHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHH
Confidence            99999999999999753  23356889999999999999988654

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.81  E-value=3.3e-19  Score=129.61  Aligned_cols=116  Identities=20%  Similarity=0.209  Sum_probs=90.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHH----HHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASV----RKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~----~~~~~~~~~  104 (147)
                      ++++|||+++|||++++++|+++|++|++++|. .+..+++.+++.... +.++.++.+|++|++++    .++++.+.+
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~   80 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARR-PNSAVTCQADLSNSATLFSRCEAIIDACFR   80 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhcc-CCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence            689999999999999999999999999998654 455666666665432 34677899999999865    566666677


Q ss_pred             cCCCccEEEEccccCCC--CCCCCH-----------HHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSK-----------DNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~-----------~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||...+  ..+.+.           +++.+++++|+.+++++++
T Consensus        81 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  135 (267)
T TIGR02685        81 AFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIK  135 (267)
T ss_pred             ccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHH
Confidence            88999999999997532  212222           3588999999999999875

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.7e-19  Score=143.49  Aligned_cols=120  Identities=28%  Similarity=0.303  Sum_probs=103.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||.+++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|.+++.++++++.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~  444 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK--GGTAHAYTCDLTDSAAVDHTVKDILA  444 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999987777777777654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCC--CCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFM--LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~--~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|++|||||....  ..+  ...+++++.+++|+.|++++++
T Consensus       445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  490 (657)
T PRK07201        445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLIL  490 (657)
T ss_pred             hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999997532  112  1257899999999999998754

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.81  E-value=3.6e-19  Score=129.78  Aligned_cols=109  Identities=25%  Similarity=0.354  Sum_probs=93.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+.    +..    ..+.++.+|+++.+++.++++.+.+.++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   73 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA----LAA----AGFTAVQLDVNDGAALARLAEELEAEHGGL   73 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            689999999999999999999999999999998654332    222    135678999999999999999999999999


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||||...  +..+.+.++++..+++|+.|++.+++
T Consensus        74 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  112 (274)
T PRK05693         74 DVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTR  112 (274)
T ss_pred             CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999753  34467889999999999999988765

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.81  E-value=1e-18  Score=125.58  Aligned_cols=120  Identities=18%  Similarity=0.181  Sum_probs=98.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.+++++++|||++++||.+++++|+++|++|++..++. +........++..  +.++.++.+|+++++++.++++++.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   79 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN--GGEGIGVLADVSTREGCETLAKATI   79 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc--CCeeEEEEeccCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999988877543 3334444445443  4578889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++|++|||||...  +..+.+.++++..+++|+.|++++++
T Consensus        80 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  124 (252)
T PRK06077         80 DRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQ  124 (252)
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHH
Confidence            99999999999999753  33356778899999999999988765

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.81  E-value=6.6e-19  Score=126.11  Aligned_cols=115  Identities=31%  Similarity=0.384  Sum_probs=97.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++++|||++++||.+++++|+++|++|++. .|+.+...+...++...  +.++.++.+|++|++++.++++++.+++++
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   79 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA--GGKAFVLQADISDENQVVAMFTAIDQHDEP   79 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC--CCeEEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999998774 56665556666666543  457888999999999999999999999999


Q ss_pred             ccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|...   +..+.+.++++..+++|+.+++++++
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  120 (247)
T PRK09730         80 LAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCR  120 (247)
T ss_pred             CCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999752   33467889999999999999987654

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.81  E-value=5.9e-19  Score=128.22  Aligned_cols=118  Identities=22%  Similarity=0.299  Sum_probs=102.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|.|+|||+.+|+|..+|++|.+.|++|++...+++..+.+..+..    ..+...+.+|++++++++++.+.+.+
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~----s~rl~t~~LDVT~~esi~~a~~~V~~  100 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK----SPRLRTLQLDVTKPESVKEAAQWVKK  100 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc----CCcceeEeeccCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999998888777777766654    45788889999999999998888876


Q ss_pred             cC--CCccEEEEccccC---CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KG--LPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~--~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ..  .+++.||||||+.   ++.+.++.+++++++++|+.|++.+++
T Consensus       101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~  147 (322)
T KOG1610|consen  101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTK  147 (322)
T ss_pred             hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHH
Confidence            54  3599999999976   456678999999999999999999876

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.80  E-value=9.7e-19  Score=126.26  Aligned_cols=114  Identities=25%  Similarity=0.232  Sum_probs=99.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||++++||.+++++|+++|++|++++|+.+..+++...+.    +.++.++.+|++|.+++.+.++++.+++++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG----DARFVPVACDLTDAASLAAALANAAAERGP   77 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5799999999999999999999999999999998776666655552    356888999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|...  +..+.++++|.+.+++|+.+++++++
T Consensus        78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  117 (257)
T PRK07074         78 VDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVE  117 (257)
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999764  23367889999999999999988764

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.80  E-value=1.7e-18  Score=123.78  Aligned_cols=119  Identities=26%  Similarity=0.322  Sum_probs=100.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++.+|+++|||++++||.+++++|+++|++|+++.|+.. ......+++...  +.++..+.+|+++++++.++++++.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL--GGKALAVQGDVSDAESVERAVDEAKA   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999988887654 344455555443  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||+|....  ..+.+.+.++..+++|+.+++.+.+
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  123 (248)
T PRK05557         80 EFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTK  123 (248)
T ss_pred             HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            89999999999997642  3467888999999999999988754

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.80  E-value=1.3e-18  Score=124.23  Aligned_cols=115  Identities=23%  Similarity=0.236  Sum_probs=96.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      |+++|||++++||.+++++|+++|++|+++.| +.+..++..+++...  +.++.++.+|+++++++.++++++.+.+++
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL--GFDFRVVEGDVSSFESCKAAVAKVEAELGP   78 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999888 444444444444433  467889999999999999999999999999


Q ss_pred             ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|...+  ..+.+.+++++.+++|+.+++.+++
T Consensus        79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  118 (242)
T TIGR01829        79 IDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQ  118 (242)
T ss_pred             CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999997642  3467889999999999999887653

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.80  E-value=1e-18  Score=124.81  Aligned_cols=113  Identities=23%  Similarity=0.276  Sum_probs=96.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||+++|||.+++++|+++|++|+++++.. +..++..+++++.  +.++.++.+|+++.+++.++++++.+.++++|
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~   78 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ--GGNARLLQFDVADRVACRTLLEADIAEHGAYY   78 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCeEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999988753 4455566666554  56789999999999999999999999999999


Q ss_pred             EEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|||+|...  +..+.+.++++..+++|+.|++++++
T Consensus        79 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  116 (239)
T TIGR01831        79 GVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIH  116 (239)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999764  23467889999999999999998764

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.80  E-value=1.5e-18  Score=125.54  Aligned_cols=118  Identities=26%  Similarity=0.288  Sum_probs=100.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++++++|||++++||..++++|+++|++|++++|+.+..+++.+...    ..++.++.+|+++++++..+++++.+
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP----GAKVTATVADVADPAQVERVFDTAVE   82 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCceEEEEccCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999998665554444332    23678899999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||+|...   .....+.+++++.+++|+.+++++++
T Consensus        83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  127 (264)
T PRK12829         83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFAR  127 (264)
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            8999999999999762   23467889999999999999988654

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.79  E-value=2e-18  Score=124.11  Aligned_cols=116  Identities=25%  Similarity=0.253  Sum_probs=99.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|++||||++++||..++++|+++|++|++++|+.+..+.+...+...  +.++.++.+|+++.+++.++++++.+.+++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA--GGSVIYLVADVTKEDEIADMIAAAAAEFGG   78 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            478999999999999999999999999999999877666666665543  467889999999999999999999988999


Q ss_pred             ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|....  ..+.++++++..++.|+.|++.+++
T Consensus        79 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  118 (255)
T TIGR01963        79 LDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIR  118 (255)
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999997642  3356788999999999999887764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.79  E-value=2.1e-18  Score=123.35  Aligned_cols=115  Identities=24%  Similarity=0.267  Sum_probs=95.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      |+++|||++++||.++|+.|+++|++|++++|+.. ...+........  +.++.++.+|+++.+++.++++++.+++++
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~   80 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFT--EDQVRLKELDVTDTEECAEALAEIEEEEGP   80 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhcc--CCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999999853 122222222221  457889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||+|...  +..+.+.+++++.+++|+.+++++++
T Consensus        81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  120 (245)
T PRK12824         81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQ  120 (245)
T ss_pred             CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999763  34467889999999999999999764

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.79  E-value=6e-20  Score=123.47  Aligned_cols=115  Identities=26%  Similarity=0.324  Sum_probs=96.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.++.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..+.++-     ...+..+..|+++++.+.+.+..  
T Consensus         2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-----p~~I~Pi~~Dls~wea~~~~l~~--   74 (245)
T KOG1207|consen    2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-----PSLIIPIVGDLSAWEALFKLLVP--   74 (245)
T ss_pred             cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-----CcceeeeEecccHHHHHHHhhcc--
Confidence            45689999999999999999999999999999999999977665555432     23478888999998776665544  


Q ss_pred             hcCCCccEEEEccccC--CCCCCCCHHHHHHhhhhhhhhhhhhccC
Q 044688          104 TKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHLHML  147 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~  147 (147)
                        .+++|++|||||+.  .+..+.+.+.|++.|++|+.++++++|+
T Consensus        75 --v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~  118 (245)
T KOG1207|consen   75 --VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQL  118 (245)
T ss_pred             --cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHH
Confidence              47899999999976  4677899999999999999999988763

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.4e-18  Score=125.26  Aligned_cols=107  Identities=22%  Similarity=0.242  Sum_probs=84.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+....  ...  ...  .. ...+.+|+++.+++.+       
T Consensus        10 ~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~--~~~--~~~--~~-~~~~~~D~~~~~~~~~-------   75 (245)
T PRK12367         10 STWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINN--SES--NDE--SP-NEWIKWECGKEESLDK-------   75 (245)
T ss_pred             HhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhh--hhh--hcc--CC-CeEEEeeCCCHHHHHH-------
Confidence            347889999999999999999999999999999999975221  111  111  12 2567899999987754       


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|++|||||+.. ..+.+.+++++.+++|+.|+++++|
T Consensus        76 ~~~~iDilVnnAG~~~-~~~~~~~~~~~~~~vN~~g~~~l~~  116 (245)
T PRK12367         76 QLASLDVLILNHGINP-GGRQDPENINKALEINALSSWRLLE  116 (245)
T ss_pred             hcCCCCEEEECCccCC-cCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            3468999999999753 3456889999999999999999876

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.4e-18  Score=124.77  Aligned_cols=115  Identities=28%  Similarity=0.282  Sum_probs=93.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.+ ..+.+..++...  +.++.++.+|+++++++.++++++.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA--GGRASAVGADLTDEESVAALMDTARE   80 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999753 344555555543  45788899999999999999999999


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.+|++|||||.... ..   .+++..+++|+.|++++++
T Consensus        81 ~~~~~d~vi~~ag~~~~-~~---~~~~~~~~vn~~~~~~l~~  118 (248)
T PRK07806         81 EFGGLDALVLNASGGME-SG---MDEDYAMRLNRDAQRNLAR  118 (248)
T ss_pred             hCCCCcEEEECCCCCCC-CC---CCcceeeEeeeHHHHHHHH
Confidence            99999999999986421 11   1245688999999988765

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.78  E-value=1.2e-18  Score=126.43  Aligned_cols=117  Identities=26%  Similarity=0.346  Sum_probs=96.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|||++.|||++.|++|+++|.+|++++|+.++++...+++...+ +.++..+.+|+++.+.+.+-+.+... ..
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~-~vev~~i~~Dft~~~~~ye~i~~~l~-~~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY-KVEVRIIAIDFTKGDEVYEKLLEKLA-GL  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh-CcEEEEEEEecCCCchhHHHHHHHhc-CC
Confidence            45999999999999999999999999999999999999999999998887 48899999999987763322222221 13


Q ss_pred             CccEEEEccccCCC----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMAS----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+-+||||+|...+    ..+.+...++..+.+|.+++..+++
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~  168 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQ  168 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHH
Confidence            57799999998742    2356666899999999999998876

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.78  E-value=3.9e-18  Score=121.69  Aligned_cols=118  Identities=17%  Similarity=0.134  Sum_probs=98.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++++|||++++||.++++.|+++|++|++++|+++..+.+.+.+...   .++.++.+|+++++++.++++++...
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~~   78 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY---GNIHYVVGDVSSTESARNVIEKAAKV   78 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999877666555555432   36788999999999999999998888


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|.+|+++|........+.+.++..+++|+.+++++.+
T Consensus        79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  119 (238)
T PRK05786         79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVN  119 (238)
T ss_pred             hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHH
Confidence            89999999999865432233448899999999999887654

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.78  E-value=5e-18  Score=121.68  Aligned_cols=113  Identities=21%  Similarity=0.292  Sum_probs=96.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||.+++++|+++|++|++++|+.+..++..+++... ++.++.++.+|+++++++.++++++.+   .+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~   77 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR-GAVAVSTHELDILDTASHAAFLDSLPA---LP   77 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh-cCCeEEEEecCCCChHHHHHHHHHHhh---cC
Confidence            68999999999999999999999999999999987776666666543 246889999999999999999998755   46


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||+|...  +..+.+.+++.+.+++|+.|++++++
T Consensus        78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  116 (243)
T PRK07102         78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLT  116 (243)
T ss_pred             CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHH
Confidence            99999999754  23467889999999999999998764

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.78  E-value=3.2e-18  Score=118.18  Aligned_cols=114  Identities=23%  Similarity=0.323  Sum_probs=89.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|||+.+|||..++++|++++. ++++++|+.   ....+..+++++.  +.++.++.||++|++++.++++++.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~~~~~~   79 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA--GARVEYVQCDVTDPEAVAAALAQLRQRF   79 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT--T-EEEEEE--TTSHHHHHHHHHTSHTTS
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC--CCceeeeccCccCHHHHHHHHHHHHhcc
Confidence            799999999999999999999986 899999983   2345567778776  7899999999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||+||...  +..+.++++++.++..++.|..+|.+
T Consensus        80 ~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~  121 (181)
T PF08659_consen   80 GPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHE  121 (181)
T ss_dssp             S-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHH
Confidence            99999999999864  34578999999999999999988764

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.78  E-value=2.2e-18  Score=121.96  Aligned_cols=119  Identities=29%  Similarity=0.351  Sum_probs=103.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-----EEEEEEccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-----HVFMAVRNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-----~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ..|+++|||+++|+|.+++.+|++...     .+++++|+.++.++..+.+.+.+|  ..++.++..|+++..++.++..
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~   81 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK   81 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence            469999999999999999999998642     478889999999999999999988  5688999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC-----------------------CC------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA-----------------------SP------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~-----------------------~~------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++|.++|.++.|||++.                       +.      ...+.+++..+|+.|++|+|++.+
T Consensus        82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~  156 (341)
T KOG1478|consen   82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIR  156 (341)
T ss_pred             HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHh
Confidence            99999999999999999751                       00      134667899999999999999754

>PRK12742 oxidoreductase; Provisional

Probab=99.77  E-value=5.8e-18  Score=120.71  Aligned_cols=110  Identities=26%  Similarity=0.363  Sum_probs=86.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||+++|||+++++.|+++|++|+++++.. +..++    +....   .+.++.+|++|.+++.+++++   
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~----l~~~~---~~~~~~~D~~~~~~~~~~~~~---   72 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAER----LAQET---GATAVQTDSADRDAVIDVVRK---   72 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHH----HHHHh---CCeEEecCCCCHHHHHHHHHH---
Confidence            36789999999999999999999999999998877642 22222    22221   245678999999988777653   


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++++|++|||||...  +..+.++++|++.+++|+.|++++++
T Consensus        73 -~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  115 (237)
T PRK12742         73 -SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASV  115 (237)
T ss_pred             -hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHH
Confidence             578999999999753  34467889999999999999998753

>PRK08324 short chain dehydrogenase; Validated

Probab=99.77  E-value=5.1e-18  Score=137.61  Aligned_cols=118  Identities=24%  Similarity=0.259  Sum_probs=103.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.||+++|||++|+||+++++.|+++|++|++++|+.+..+....++...   .++.++.+|+++++++.++++++.+.
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~---~~v~~v~~Dvtd~~~v~~~~~~~~~~  495 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP---DRALGVACDVTDEAAVQAAFEEAALA  495 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc---CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999999999987766666655432   46889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++|||||...  +..+.+.++|+..+++|+.|++.+++
T Consensus       496 ~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  538 (681)
T PRK08324        496 FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAR  538 (681)
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999764  34467899999999999999998864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.77  E-value=1.6e-17  Score=118.68  Aligned_cols=118  Identities=25%  Similarity=0.328  Sum_probs=97.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +..|+++|||++++||.+++++|+++|++|++..++... .+...+.+...  +.++.++.+|+++.+++.++++++.+.
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL--GRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999998886765443 33444444433  457889999999999999999999888


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++||++|....  ..+.+.++++..+++|+.+++++++
T Consensus        82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  124 (249)
T PRK12825         82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLR  124 (249)
T ss_pred             cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            8999999999996542  3356888999999999999988764

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=8.3e-18  Score=119.84  Aligned_cols=104  Identities=26%  Similarity=0.340  Sum_probs=85.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++.+|+++|||++++||.+++++|+++|++|++++|+....      .     ..++.++.+|++++      ++++.+.
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~-----~~~~~~~~~D~~~~------~~~~~~~   64 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------L-----SGNFHFLQLDLSDD------LEPLFDW   64 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------c-----CCcEEEEECChHHH------HHHHHHh
Confidence            47789999999999999999999999999999999875321      0     24678889999887      4445556


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||...   +..+.+.+++++.+++|+.|++++++
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  108 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTR  108 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            689999999999752   34567889999999999999998865

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.76  E-value=1.8e-17  Score=128.68  Aligned_cols=116  Identities=28%  Similarity=0.371  Sum_probs=95.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|||+++|||.+++++|+++|++|+++++...  .+...++.+..   ....+.+|+++.+++.++++.+.++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~--~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~  281 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA--GEALAAVANRV---GGTALALDITAPDAPARIAEHLAER  281 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc--HHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999999988432  12222232221   2346789999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||||+...  ..+.+.+.|+.++++|+.|++++++
T Consensus       282 ~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  324 (450)
T PRK08261        282 HGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITE  324 (450)
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999997642  3467899999999999999998865

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.75  E-value=3.6e-18  Score=122.49  Aligned_cols=108  Identities=32%  Similarity=0.429  Sum_probs=94.4

Q ss_pred             cCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-CCccEE
Q 044688           36 GAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG-LPLNIL  112 (147)
Q Consensus        36 G~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l  112 (147)
                      |++  +|||+++|++|+++|++|++++|+.++.++..+++.+..+ .+  ++.+|++++++++++++++.+++ |++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AE--VIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SE--EEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-Cc--eEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            555  9999999999999999999999998887777777777653 34  59999999999999999999999 999999


Q ss_pred             EEccccCCC------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          113 INNAGIMAS------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       113 v~~ag~~~~------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |||+|...+      ..+.+.++|+..+++|+.+++.++|
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQ  117 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999997642      2367889999999999999999876

...

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2e-17  Score=118.43  Aligned_cols=112  Identities=31%  Similarity=0.403  Sum_probs=91.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.+++++++|||++++||..+++.|+++|++|++++|+.+..+++....       ...++.+|+++.+++.++++.  
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~--   74 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-------GCEPLRLDVGDDAAIRAALAA--   74 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------CCeEEEecCCCHHHHHHHHHH--
Confidence            34578999999999999999999999999999999999865544333322       245678999999988887765  


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++++|++|||+|...  +..+.+.+++++.+++|+.+++.+++
T Consensus        75 --~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  117 (245)
T PRK07060         75 --AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVAR  117 (245)
T ss_pred             --hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence              468999999999753  23467888999999999999998875

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.2e-17  Score=119.67  Aligned_cols=108  Identities=22%  Similarity=0.252  Sum_probs=88.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||+++|||.+++++|+++|++|++++|+.+..+++.    ..  ..++.++.+|+++.+++.++++++..   .+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~   72 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH----TQ--SANIFTLAFDVTDHPGTKAALSQLPF---IP   72 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----Hh--cCCCeEEEeeCCCHHHHHHHHHhccc---CC
Confidence            68999999999999999999999999999999865443332    22  34678899999999999999887632   47


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |.+|||||...  +....+++++++.+++|+.|++++++
T Consensus        73 d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  111 (240)
T PRK06101         73 ELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIE  111 (240)
T ss_pred             CEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999998643  22357889999999999999998875

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.75  E-value=3.4e-17  Score=111.03  Aligned_cols=115  Identities=24%  Similarity=0.307  Sum_probs=95.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHH---HHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDV---KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~---~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|||++++||.+++++|+++|+ .|++++|+.+..+..   ...+...  +.++.++.+|+++++++.++++++...
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   78 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL--GAEVTVVACDVADRAALAAALAAIPAR   78 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999997 688888876544332   2344333  567888999999999999999999888


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|++|||+|...  +..+.+.++++..+++|+.+++++++
T Consensus        79 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  121 (180)
T smart00822       79 LGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHE  121 (180)
T ss_pred             cCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHH
Confidence            999999999999753  23467889999999999999998865

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.75  E-value=1.6e-17  Score=127.11  Aligned_cols=108  Identities=25%  Similarity=0.255  Sum_probs=87.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||.+++++|+++|++|++++|+.++.++.   ....  ...+..+.+|++|.+++.+.+      
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~--~~~v~~v~~Dvsd~~~v~~~l------  243 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGE--DLPVKTLHWQVGQEAALAELL------  243 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---Hhhc--CCCeEEEEeeCCCHHHHHHHh------
Confidence            46899999999999999999999999999999999876543222   2211  234667889999998876543      


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       +++|++|||||+.. ..+.+.+++++.+++|+.|++++++
T Consensus       244 -~~IDiLInnAGi~~-~~~~s~e~~~~~~~vNv~g~i~Li~  282 (406)
T PRK07424        244 -EKVDILIINHGINV-HGERTPEAINKSYEVNTFSAWRLME  282 (406)
T ss_pred             -CCCCEEEECCCcCC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence             47999999999753 3467889999999999999999875

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2.1e-17  Score=119.12  Aligned_cols=110  Identities=28%  Similarity=0.378  Sum_probs=90.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|++||||++++||.++++.|+++|++|++++|+.+..+++.+.....  +.++.++.+|++|++++.+.+.      ++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~------~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR--GLALRVEKLDLTDAIDRAQAAE------WD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeeCCCHHHHHHHhc------CC
Confidence            578999999999999999999999999999999876655555544433  4568889999999998877653      37


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||...  +..+.+.+.++..+++|+.+++.+++
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  113 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQ  113 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999764  34467889999999999999987654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.75  E-value=1.7e-17  Score=117.83  Aligned_cols=108  Identities=28%  Similarity=0.357  Sum_probs=90.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||++++||.+++++|+++|++|++++|+++..+++.    .   ..++.+..+|++|++++.++++.+..  +++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~---~~~~~~~~~D~~d~~~~~~~~~~~~~--~~i   72 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----A---LPGVHIEKLDMNDPASLDQLLQRLQG--QRF   72 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----h---ccccceEEcCCCCHHHHHHHHHHhhc--CCC
Confidence            68999999999999999999999999999999976644332    1   13566788999999999999998754  479


Q ss_pred             cEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||||+..    +..+.+.++++..+++|+.+++.+++
T Consensus        73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  113 (225)
T PRK08177         73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR  113 (225)
T ss_pred             CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHH
Confidence            99999999853    23467889999999999999988765

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.75  E-value=3.3e-17  Score=116.66  Aligned_cols=113  Identities=27%  Similarity=0.385  Sum_probs=95.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||++++||..++++|+++|++|++++|+. +..+.....+...  +.++.++.+|++|+++++++++.+.++++++|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY--GVKALGVVCDVSDREDVKAVVEEIEEELGPID   78 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            58999999999999999999999999999875 3344455555443  45788999999999999999999999999999


Q ss_pred             EEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++||++|....  ..+.+.+.+++.+++|+.+++++++
T Consensus        79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  116 (239)
T TIGR01830        79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQ  116 (239)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999997642  3356788999999999999988754

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.75  E-value=2e-17  Score=118.95  Aligned_cols=112  Identities=22%  Similarity=0.287  Sum_probs=90.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      |+++|||+++|||++++++|+++|++|++++|+.. ..+.    +.... +.++.++.+|+++++++.++++++.+.++.
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~----~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTK----LAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQE   76 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHH----HHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCc
Confidence            68999999999999999999999999999999762 2222    22221 457888999999999999999998776543


Q ss_pred             --c--cEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 --L--NILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 --i--d~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        +  +++|||+|...   +..+.+.++|.+.+++|+.+++.+++
T Consensus        77 ~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  121 (251)
T PRK06924         77 DNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS  121 (251)
T ss_pred             ccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHH
Confidence              2  28999999753   34478899999999999999988764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.75  E-value=1.3e-17  Score=121.18  Aligned_cols=117  Identities=21%  Similarity=0.232  Sum_probs=104.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +.++|||+++|||+++|.++..+|++|.++.|+.+++.++.+++.-......+.+..+|+.|.+++...++++...++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            78999999999999999999999999999999999999888887544323348899999999999999999999999999


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |.+|||||..-  -..+.+++.++..|++|+.|++++++
T Consensus       114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~  152 (331)
T KOG1210|consen  114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAK  152 (331)
T ss_pred             ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHH
Confidence            99999999753  45589999999999999999999875

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-17  Score=117.62  Aligned_cols=106  Identities=14%  Similarity=0.135  Sum_probs=85.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||+++|||+++++.|+++|++|++++|+.++.++..+++       .+.++.+|+++++++.++++++.+   ++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~D~~~~~~v~~~~~~~~~---~id   71 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-------DVDAIVCDNTDPASLEEARGLFPH---HLD   71 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-------cCcEEecCCCCHHHHHHHHHHHhh---cCc
Confidence            4899999999999999999999999999999866554444332       245778999999999999887643   699


Q ss_pred             EEEEccccCC----C---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA----S---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~----~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|||+|...    +   ....+.++|++.+++|+.|+++++|
T Consensus        72 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  114 (223)
T PRK05884         72 TIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQ  114 (223)
T ss_pred             EEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHH
Confidence            9999998521    1   1111568899999999999999876

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.74  E-value=1.9e-17  Score=117.58  Aligned_cols=107  Identities=23%  Similarity=0.295  Sum_probs=90.1

Q ss_pred             EEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 044688           33 IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNIL  112 (147)
Q Consensus        33 litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l  112 (147)
                      +|||++++||++++++|+++|++|++++|+.+..+....++..   +.++.++.+|+++++++.+++++    .+++|++
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~l   73 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG---GAPVRTAALDITDEAAVDAFFAE----AGPFDHV   73 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999999999987665555555532   45788899999999999988875    3789999


Q ss_pred             EEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          113 INNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       113 v~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |||+|....  ..+.+.+++++.+++|+.+++++++
T Consensus        74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  109 (230)
T PRK07041         74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR  109 (230)
T ss_pred             EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh
Confidence            999997642  3467889999999999999998865

>PRK08264 short chain dehydrogenase; Validated

Probab=99.74  E-value=2.8e-17  Score=117.30  Aligned_cols=109  Identities=34%  Similarity=0.460  Sum_probs=91.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.+.+++++|||++++||++++++|+++|+ +|++++|+.++..+       .  +.++.++.+|++|.+++.++++.  
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~--~~~~~~~~~D~~~~~~~~~~~~~--   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------L--GPRVVPLQLDVTDPASVAAAAEA--   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------c--CCceEEEEecCCCHHHHHHHHHh--
Confidence            457889999999999999999999999999 99999998654332       1  45788999999999999887765  


Q ss_pred             hcCCCccEEEEccccC-C--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIM-A--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~-~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++++|++||++|.. .  +..+.+.++++..+++|+.+++.+++
T Consensus        71 --~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  114 (238)
T PRK08264         71 --ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMAR  114 (238)
T ss_pred             --cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence              46799999999983 2  34467889999999999999988765

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.73  E-value=5.1e-17  Score=113.22  Aligned_cols=117  Identities=27%  Similarity=0.392  Sum_probs=93.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEE-EEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHV-FMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v-~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..|.++|||+++|||..++++|++. |..+ +.+.|++++..+..+.....  ..+++.+++|+++.+++.++++++.+-
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~--d~rvHii~Ldvt~deS~~~~~~~V~~i   79 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKS--DSRVHIIQLDVTCDESIDNFVQEVEKI   79 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhcc--CCceEEEEEecccHHHHHHHHHHHHhh
Confidence            4577999999999999999999975 5555 45666777653333333222  579999999999999999999999886


Q ss_pred             --CCCccEEEEccccCCCC---CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 --GLPLNILINNAGIMASP---FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 --~~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ..++|++|||||+..+.   ...+.+.|-+.+++|..|++.++|
T Consensus        80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q  125 (249)
T KOG1611|consen   80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQ  125 (249)
T ss_pred             cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHH
Confidence              66899999999987532   245667899999999999999876

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.73  E-value=5.6e-17  Score=116.24  Aligned_cols=109  Identities=28%  Similarity=0.326  Sum_probs=88.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH-HHhcC---
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD-FTTKG---  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---  106 (147)
                      +++|||+++|||.+++++|+++|++|++++|+.+.  .+    ... .+.++.++.+|+++++++.+++++ +.+++   
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~--~~----~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   75 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP--SL----AAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDG   75 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch--hh----hhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccC
Confidence            69999999999999999999999999999997543  11    111 145788999999999999998776 54443   


Q ss_pred             CCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|||+|...   +..+.+.++++..+++|+.|++.+++
T Consensus        76 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (243)
T PRK07023         76 ASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA  118 (243)
T ss_pred             CCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence            47999999999753   23467889999999999999988754

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.73  E-value=5.1e-17  Score=144.27  Aligned_cols=116  Identities=21%  Similarity=0.218  Sum_probs=95.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCc------------------------------------------
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMA------------------------------------------   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~------------------------------------------   64 (147)
                      .++++|||||++|||.+++++|+++ |++|++++|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            6899999999999999999999998 699999999820                                          


Q ss_pred             -----cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhh
Q 044688           65 -----AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATN  137 (147)
Q Consensus        65 -----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N  137 (147)
                           ......+.+.+.  +.++.++.||++|.+++.++++++.++ ++||+||||||+..  ...+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~--G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAA--GASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCCCcccCCHHHHHHHHHHH
Confidence                 000112223332  568899999999999999999999877 68999999999864  34478999999999999


Q ss_pred             hhhhhhhcc
Q 044688          138 HLGSLHLHM  146 (147)
Q Consensus       138 ~~g~~~l~~  146 (147)
                      +.|++++++
T Consensus      2153 v~G~~~Ll~ 2161 (2582)
T TIGR02813      2153 VDGLLSLLA 2161 (2582)
T ss_pred             HHHHHHHHH
Confidence            999998764

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.72  E-value=1.2e-16  Score=111.54  Aligned_cols=119  Identities=13%  Similarity=0.130  Sum_probs=102.8

Q ss_pred             CCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..|+||++||+|-+  ++|+..||+.|.++|+++..++.++ ++++-..++.+..  +....++||+++.++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~--~s~~v~~cDV~~d~~i~~~f~~i   78 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEEL--GSDLVLPCDVTNDESIDALFATI   78 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhc--cCCeEEecCCCCHHHHHHHHHHH
Confidence            46899999999986  7999999999999999999999875 5666666666553  34678999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++||.+|+|||+-|+..      +..+.+.|.|...+++..++...+++
T Consensus        79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak  128 (259)
T COG0623          79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAK  128 (259)
T ss_pred             HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHH
Confidence            999999999999999863      45578899999999999999877654

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.72  E-value=1.2e-16  Score=113.68  Aligned_cols=105  Identities=20%  Similarity=0.291  Sum_probs=88.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+|+++|||++++||.+++++|+++|++|++++|+.+.          .. .  ..++.+|+++.+++.++++++.+.+ 
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~~-~--~~~~~~D~~~~~~~~~~~~~~~~~~-   67 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------DF-P--GELFACDLADIEQTAATLAQINEIH-   67 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------cc-C--ceEEEeeCCCHHHHHHHHHHHHHhC-
Confidence            57899999999999999999999999999999998653          01 1  1367899999999999999988776 


Q ss_pred             CccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||+|....  ..+.+.++++..+++|+.+++++++
T Consensus        68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  108 (234)
T PRK07577         68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQ  108 (234)
T ss_pred             CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHH
Confidence            68999999997642  3356889999999999999988764

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.71  E-value=2e-16  Score=112.12  Aligned_cols=107  Identities=27%  Similarity=0.352  Sum_probs=87.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||++++||.+++++|+++|++|++++|+.+..+++    ...    .+.++.+|+++.+++.++++++..  +++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~v~~~~~~~~~--~~~   71 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL----QAL----GAEALALDVADPASVAGLAWKLDG--EAL   71 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH----Hhc----cceEEEecCCCHHHHHHHHHHhcC--CCC
Confidence            6899999999999999999999999999999986544332    221    245789999999999998776632  479


Q ss_pred             cEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|||+|...    +..+.+.++++..+++|+.+++.+++
T Consensus        72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  112 (222)
T PRK06953         72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLP  112 (222)
T ss_pred             CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHH
Confidence            99999999762    22356899999999999999998864

>PRK08017 oxidoreductase; Provisional

Probab=99.69  E-value=3.9e-16  Score=112.47  Aligned_cols=108  Identities=31%  Similarity=0.374  Sum_probs=89.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK-GLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~  108 (147)
                      |+++|||++|+||.++++.|+++|++|++++|+.++.+.+    ...    .+..+.+|++|.+++.++++.+... .+.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~----~~~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~   74 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM----NSL----GFTGILLDLDDPESVERAADEVIALTDNR   74 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH----HhC----CCeEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            7899999999999999999999999999999986554332    221    3567889999999999999888764 368


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +|++|||+|...  +..+.+.+++++.+++|+.|+++++
T Consensus        75 ~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~  113 (256)
T PRK08017         75 LYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLT  113 (256)
T ss_pred             CeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHH
Confidence            999999999753  3446788999999999999998864

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.68  E-value=3.7e-16  Score=108.97  Aligned_cols=92  Identities=21%  Similarity=0.337  Sum_probs=79.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||+++|||.+++++|+++ ++|++++|+..                   .+.+|++|++++++++++    ++++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------------~~~~D~~~~~~~~~~~~~----~~~id   57 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------------DVQVDITDPASIRALFEK----VGKVD   57 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------------ceEecCCChHHHHHHHHh----cCCCC
Confidence            6999999999999999999999 99999998742                   357999999999988775    47899


Q ss_pred             EEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|||||...  +..+.+.++|++.+++|+.+++++++
T Consensus        58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   95 (199)
T PRK07578         58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVL   95 (199)
T ss_pred             EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999753  23367889999999999999998875

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.67  E-value=7.8e-16  Score=109.72  Aligned_cols=103  Identities=25%  Similarity=0.332  Sum_probs=81.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++|||+++|||++++++|+++|  ..|++.+|+...  .        ..+.++.++.+|+++.+++.++.    ++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~--------~~~~~~~~~~~Dls~~~~~~~~~----~~~~   66 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D--------FQHDNVQWHALDVTDEAEIKQLS----EQFT   66 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c--------cccCceEEEEecCCCHHHHHHHH----HhcC
Confidence            479999999999999999999985  567776765432  1        11357888999999999888754    4468


Q ss_pred             CccEEEEccccCCC--------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMAS--------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~--------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|||||....        ..+.+.+.+++.+++|+.+++.+++
T Consensus        67 ~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  113 (235)
T PRK09009         67 QLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAK  113 (235)
T ss_pred             CCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999998631        2256778899999999999998765

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.65  E-value=2.1e-15  Score=112.38  Aligned_cols=110  Identities=17%  Similarity=0.193  Sum_probs=84.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++|++||||++|+||.+++++|+++|++|+++.|+..........+.......++.++.+|+++.+++.++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999998876544332222111112468889999999998887775       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|+||||||...  ...+.+.+...+++|+.|++++++
T Consensus        77 ~~d~vih~A~~~~--~~~~~~~~~~~~~~n~~g~~~ll~  113 (325)
T PLN02989         77 GCETVFHTASPVA--ITVKTDPQVELINPAVNGTINVLR  113 (325)
T ss_pred             CCCEEEEeCCCCC--CCCCCChHHHHHHHHHHHHHHHHH
Confidence            5899999999642  233445678899999999998865

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.65  E-value=2.5e-15  Score=113.18  Aligned_cols=110  Identities=20%  Similarity=0.162  Sum_probs=87.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++||++||||++|+||.+++++|+++|++|++++|+..........+..   ..++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~----   74 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL---AKKIEDHFGDIRDAAKLRKAIAEF----   74 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh---cCCceEEEccCCCHHHHHHHHhhc----
Confidence            4689999999999999999999999999999999886544333322221   235777899999999999988864    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+|||+||..  ....+.+++...+++|+.+++++++
T Consensus        75 -~~d~vih~A~~~--~~~~~~~~~~~~~~~N~~g~~~ll~  111 (349)
T TIGR02622        75 -KPEIVFHLAAQP--LVRKSYADPLETFETNVMGTVNLLE  111 (349)
T ss_pred             -CCCEEEECCccc--ccccchhCHHHHHHHhHHHHHHHHH
Confidence             689999999953  2244556677899999999988764

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.64  E-value=1.3e-15  Score=118.35  Aligned_cols=114  Identities=21%  Similarity=0.225  Sum_probs=100.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++||++|||||+|+||.++++++++.+. ++++.++++.+......+++..+|..++.++.+|+.|.+.+.++++..  
T Consensus       247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~--  324 (588)
T COG1086         247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH--  324 (588)
T ss_pred             HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC--
Confidence            58999999999999999999999999985 799999999999999999999887789999999999999999999865  


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ++|+++|.|+..+  ..+.+....+.+.+|++|+.++++
T Consensus       325 ---kvd~VfHAAA~KH--VPl~E~nP~Eai~tNV~GT~nv~~  361 (588)
T COG1086         325 ---KVDIVFHAAALKH--VPLVEYNPEEAIKTNVLGTENVAE  361 (588)
T ss_pred             ---CCceEEEhhhhcc--CcchhcCHHHHHHHhhHhHHHHHH
Confidence               6999999999764  334444556799999999988764

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.64  E-value=3.2e-15  Score=105.78  Aligned_cols=107  Identities=22%  Similarity=0.295  Sum_probs=86.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|+++|||++++||..+++.|+++ ++|++++|+.+..+++.+..      ..+.++.+|++|.+++.++++.+    ++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~----~~   71 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL------PGATPFPVDLTDPEAIAAAVEQL----GR   71 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh------ccceEEecCCCCHHHHHHHHHhc----CC
Confidence            478999999999999999999999 99999999865544333221      24678899999999998887653    47


Q ss_pred             ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++||++|....  ..+.+.+++++.+++|+.+++.+++
T Consensus        72 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  111 (227)
T PRK08219         72 LDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTR  111 (227)
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999997642  2357788999999999999877653

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.63  E-value=4.5e-15  Score=111.90  Aligned_cols=90  Identities=12%  Similarity=0.033  Sum_probs=73.5

Q ss_pred             CCCCEEEEecCCCchhHH--HHHHHHHCCCEEEEEEccCccch------------HHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           27 ATGLTAIVTGASSGIGAE--TTRVLALRGVHVFMAVRNMAAGT------------DVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      -.+|++||||+++|+|.+  +|+.| ++|++++++++..+..+            .+.+.+.+.  +..+..+.||+++.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~--G~~a~~i~~DVss~  115 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA--GLYAKSINGDAFSD  115 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc--CCceEEEEcCCCCH
Confidence            457999999999999999  89999 99999888885432211            223333332  55678899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccC
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~  119 (147)
                      +++.++++++.+++|++|+||||+|..
T Consensus       116 E~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        116 EIKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCccC
Confidence            999999999999999999999999976

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.61  E-value=6.5e-15  Score=110.09  Aligned_cols=107  Identities=12%  Similarity=0.137  Sum_probs=81.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++|++||||++|+||.+++++|+++|  ++|++++|+......+...+    ...++.++.+|++|.+++.++++    
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~----~~~~~~~v~~Dl~d~~~l~~~~~----   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF----PAPCLRFFIGDVRDKERLTRALR----   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh----CCCcEEEEEccCCCHHHHHHHHh----
Confidence            568999999999999999999999986  68998888754433322222    13468889999999999887765    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+|||+||.....  ....+....+++|+.|+.++++
T Consensus        74 ---~iD~Vih~Ag~~~~~--~~~~~~~~~~~~Nv~g~~~ll~  110 (324)
T TIGR03589        74 ---GVDYVVHAAALKQVP--AAEYNPFECIRTNINGAQNVID  110 (324)
T ss_pred             ---cCCEEEECcccCCCc--hhhcCHHHHHHHHHHHHHHHHH
Confidence               589999999975321  1122234689999999998865

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.60  E-value=6.8e-15  Score=110.41  Aligned_cols=114  Identities=23%  Similarity=0.197  Sum_probs=84.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHh-h-CCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVK-E-IPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.+++++||||++|+||.+++++|+++|++|++++|..+.. ....+.+.. . ..+.++.++.+|++|.+++.++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            46789999999999999999999999999999998865421 111222211 0 01346889999999999999988865


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                           .+|+|||+|+....  ....+..+..+++|+.|+.++++
T Consensus        83 -----~~d~Vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~  119 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV--AVSFEMPDYTADVVATGALRLLE  119 (340)
T ss_pred             -----CCCEEEECCcccch--hhhhhChhHHHHHHHHHHHHHHH
Confidence                 59999999997532  22334456778999999888764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.59  E-value=3.7e-14  Score=110.10  Aligned_cols=116  Identities=13%  Similarity=0.152  Sum_probs=85.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-------h---------HHHHHHHhhCCCCeeEEEEec
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-------T---------DVKDAIVKEIPTAKVDVLELD   88 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-------~---------~~~~~l~~~~~~~~~~~~~~D   88 (147)
                      ..++++++|||||+|+||..++++|+++|++|+++++.....       .         +....+... .+.++.++.+|
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~~v~~D  121 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV-SGKEIELYVGD  121 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh-hCCcceEEECC
Confidence            457889999999999999999999999999999987531100       0         011111111 13468899999


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccccCCCC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 LSSLASVRKFASDFTTKGLPLNILINNAGIMASP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|.+.+.++++..     ++|+|||+|+..... ...++++++..+++|+.|++++++
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlle  175 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLF  175 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHH
Confidence            99999999888864     699999999754322 234556677889999999998864

>PLN02240 UDP-glucose 4-epimerase

Probab=99.57  E-value=4e-14  Score=106.48  Aligned_cols=114  Identities=21%  Similarity=0.223  Sum_probs=85.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++++++|||++|++|.+++++|+++|++|++++|...........+....  .+.++.++.+|+++++++.++++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            5678999999999999999999999999999999875433222222222111  1246788999999999998887753 


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          .+|+|||+|+....  ..+.+++...+++|+.++.++++
T Consensus        81 ----~~d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  117 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV--GESVAKPLLYYDNNLVGTINLLE  117 (352)
T ss_pred             ----CCCEEEEccccCCc--cccccCHHHHHHHHHHHHHHHHH
Confidence                79999999996532  22334567889999999988764

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.57  E-value=2.5e-14  Score=112.73  Aligned_cols=110  Identities=19%  Similarity=0.220  Sum_probs=85.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-------CCCeeEEEEecCCCHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-------PTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-------~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      ..+||+++||||+|+||++++++|++.|++|++++|+.++...+...+.+..       ...++.++.+|++|.+++.+.
T Consensus        77 ~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a  156 (576)
T PLN03209         77 TKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA  156 (576)
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH
Confidence            4578999999999999999999999999999999999877666655543210       013588999999999887653


Q ss_pred             HHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           99 ASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        99 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                             ++++|+||||+|....    ...++...+++|+.|+.++++
T Consensus       157 -------LggiDiVVn~AG~~~~----~v~d~~~~~~VN~~Gt~nLl~  193 (576)
T PLN03209        157 -------LGNASVVICCIGASEK----EVFDVTGPYRIDYLATKNLVD  193 (576)
T ss_pred             -------hcCCCEEEEccccccc----cccchhhHHHHHHHHHHHHHH
Confidence                   3579999999986531    112466778899988887764

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.55  E-value=7.6e-14  Score=105.34  Aligned_cols=111  Identities=18%  Similarity=0.168  Sum_probs=82.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.+++++||||++|+||..++++|+++|++|++++|+.+....+...+..   +.++.++.+|+++.+.+.++++     
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~-----   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE---GDRLRLFRADLQEEGSFDEAVK-----   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc---CCeEEEEECCCCCHHHHHHHHc-----
Confidence            46778999999999999999999999999999999876544444333321   3468889999999988877764     


Q ss_pred             CCCccEEEEccccCCCCC---CCCHHHH--HHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPF---MLSKDNI--ELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~---~~~~~~~--~~~~~~N~~g~~~l~~  146 (147)
                        .+|+|||+|+......   ..+++.+  ...++.|+.|+.++++
T Consensus        79 --~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~  122 (353)
T PLN02896         79 --GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLK  122 (353)
T ss_pred             --CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHH
Confidence              4899999999754321   2233333  3567778888887754

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.54  E-value=4.9e-14  Score=105.94  Aligned_cols=110  Identities=19%  Similarity=0.216  Sum_probs=79.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHhh---CCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKE---IPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      |++|||||+|+||..++++|++.|++|++++|+.+.. ......+...   ..+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            6899999999999999999999999999999875421 1111112111   01235788999999999998888864   


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++|+|||+|+....  ..+.+.....+++|+.|+.++++
T Consensus        78 --~~d~ViH~Aa~~~~--~~~~~~~~~~~~~n~~gt~~ll~  114 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV--KVSFEIPEYTADVDGIGTLRLLE  114 (343)
T ss_pred             --CCCEEEECCccccc--chhhhChHHHHHHHHHHHHHHHH
Confidence              58999999997532  12223335677889888887754

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.54  E-value=2.6e-15  Score=109.59  Aligned_cols=108  Identities=22%  Similarity=0.287  Sum_probs=77.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCee----EEEEecCCCHHHHHHHHHHHHhcC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKV----DVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +|||||+|.||.+++++|++.+. +++++++++.++.++..+++...++.++    ..+.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            69999999999999999999984 8999999999999999988766544334    34588999999999998865    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+++|.|+..+  ..+.++...+.+++|+.|+.++++
T Consensus        77 -~pdiVfHaAA~Kh--Vpl~E~~p~eav~tNv~GT~nv~~  113 (293)
T PF02719_consen   77 -KPDIVFHAAALKH--VPLMEDNPFEAVKTNVLGTQNVAE  113 (293)
T ss_dssp             -T-SEEEE--------HHHHCCCHHHHHHHHCHHHHHHHH
T ss_pred             -CCCEEEEChhcCC--CChHHhCHHHHHHHHHHHHHHHHH
Confidence             8999999999764  222223456789999999988764

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.54  E-value=1.3e-13  Score=102.66  Aligned_cols=110  Identities=19%  Similarity=0.224  Sum_probs=81.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+|++++|||++|+||.+++++|+++|++|+++.|+.+..+.............++.++.+|+++.+.+.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            46799999999999999999999999999999999866544332222111112467889999999998887776      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+|||+|+.....  . .+.....+++|+.|+.++++
T Consensus        77 -~~d~vih~A~~~~~~--~-~~~~~~~~~~nv~gt~~ll~  112 (322)
T PLN02986         77 -GCDAVFHTASPVFFT--V-KDPQTELIDPALKGTINVLN  112 (322)
T ss_pred             -CCCEEEEeCCCcCCC--C-CCchhhhhHHHHHHHHHHHH
Confidence             589999999864211  1 12234678999999888764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.50  E-value=1.9e-13  Score=103.08  Aligned_cols=108  Identities=14%  Similarity=0.143  Sum_probs=78.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEE-EEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVF-MAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~-~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++||||++|+||.++++.|+++|+.++ +.++..+. ... ..+....++.++.++.+|++|.+++.++++..     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GNL-MSLAPVAQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cch-hhhhhcccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998644 45544221 111 11111111346778899999999998888753     6


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+||...  ...+.++++..+++|+.|+.++++
T Consensus        75 ~D~Vih~A~~~~--~~~~~~~~~~~~~~N~~gt~~ll~  110 (355)
T PRK10217         75 PDCVMHLAAESH--VDRSIDGPAAFIETNIVGTYTLLE  110 (355)
T ss_pred             CCEEEECCcccC--cchhhhChHHHHHHhhHHHHHHHH
Confidence            999999998653  233446678899999999998765

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.50  E-value=2.9e-13  Score=100.66  Aligned_cols=108  Identities=17%  Similarity=0.149  Sum_probs=79.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++++||||++|.||..++++|+++|++|+++.|+........ .+.... ...++.++.+|+++++.+.++++      
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTE-HLLALDGAKERLHLFKANLLEEGSFDSVVD------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHH-HHHhccCCCCceEEEeccccCcchHHHHHc------
Confidence            4689999999999999999999999999999998765432222 221110 02367889999999988877765      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+|||+|+...... ..+  ....+++|+.|+.++++
T Consensus        76 -~~d~Vih~A~~~~~~~-~~~--~~~~~~~nv~gt~~ll~  111 (322)
T PLN02662         76 -GCEGVFHTASPFYHDV-TDP--QAELIDPAVKGTLNVLR  111 (322)
T ss_pred             -CCCEEEEeCCcccCCC-CCh--HHHHHHHHHHHHHHHHH
Confidence             5899999998643111 111  24688999999888764

>PLN02214 cinnamoyl-CoA reductase

Probab=99.49  E-value=2.8e-13  Score=101.97  Aligned_cols=104  Identities=19%  Similarity=0.182  Sum_probs=80.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH-HHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV-KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++++++|||++|+||..++++|+++|++|++++|+.+..... ...+...  ..++.++.+|++|.+++.++++     
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~-----   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGG--KERLILCKADLQDYEALKAAID-----   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCC--CCcEEEEecCcCChHHHHHHHh-----
Confidence            5678999999999999999999999999999999976532211 2222211  2357788999999998887765     


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++|+|||+|+...       ++.+..+++|+.|+.++++
T Consensus        81 --~~d~Vih~A~~~~-------~~~~~~~~~nv~gt~~ll~  112 (342)
T PLN02214         81 --GCDGVFHTASPVT-------DDPEQMVEPAVNGAKFVIN  112 (342)
T ss_pred             --cCCEEEEecCCCC-------CCHHHHHHHHHHHHHHHHH
Confidence              5899999998531       2356789999999988764

>PLN02650 dihydroflavonol-4-reductase

Probab=99.49  E-value=5.8e-13  Score=100.44  Aligned_cols=109  Identities=25%  Similarity=0.120  Sum_probs=80.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ..+++||||++|.||..++++|+++|++|++++|+.+........+.......++.++.+|+++.+.+.++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4678999999999999999999999999999999865544433222111001357889999999988887765       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|.|||+|+.... ..  .+..+..+++|+.|+.++++
T Consensus        77 ~~d~ViH~A~~~~~-~~--~~~~~~~~~~Nv~gt~~ll~  112 (351)
T PLN02650         77 GCTGVFHVATPMDF-ES--KDPENEVIKPTVNGMLSIMK  112 (351)
T ss_pred             CCCEEEEeCCCCCC-CC--CCchhhhhhHHHHHHHHHHH
Confidence            58999999986421 11  12235678999999988764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.47  E-value=8.5e-13  Score=99.01  Aligned_cols=109  Identities=15%  Similarity=0.110  Sum_probs=79.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++++++|||++|+||..++++|+++|++|+++.|+......... +.......++.++.+|++|.+++.++++      
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRALQELGDLKIFGADLTDEESFEAPIA------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhcCCCCceEEEEcCCCChHHHHHHHh------
Confidence            457899999999999999999999999999988887654332211 1111001357888999999988877665      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+|+... ..  ..+.....+++|+.|+.++++
T Consensus        80 -~~d~vih~A~~~~-~~--~~~~~~~~~~~nv~g~~~ll~  115 (338)
T PLN00198         80 -GCDLVFHVATPVN-FA--SEDPENDMIKPAIQGVHNVLK  115 (338)
T ss_pred             -cCCEEEEeCCCCc-cC--CCChHHHHHHHHHHHHHHHHH
Confidence             5899999998532 11  122334578999999988764

>PLN02583 cinnamoyl-CoA reductase

Probab=99.46  E-value=7.5e-13  Score=97.85  Aligned_cols=106  Identities=15%  Similarity=0.044  Sum_probs=77.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc--chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA--GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+|+++|||++|+||..++++|+++|++|+++.|+.+.  .......+...  +.++.++.+|++|.+++.+++.     
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCE--EERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccC--CCceEEEEecCCCHHHHHHHHc-----
Confidence            46899999999999999999999999999999986432  12222222111  2467788999999988876554     


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        .+|.++|.++...   ... .+++..+++|+.|++++++
T Consensus        78 --~~d~v~~~~~~~~---~~~-~~~~~~~~~nv~gt~~ll~  112 (297)
T PLN02583         78 --GCSGLFCCFDPPS---DYP-SYDEKMVDVEVRAAHNVLE  112 (297)
T ss_pred             --CCCEEEEeCccCC---ccc-ccHHHHHHHHHHHHHHHHH
Confidence              5888998765322   111 2467899999999998875

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.45  E-value=1e-12  Score=99.17  Aligned_cols=114  Identities=12%  Similarity=0.070  Sum_probs=82.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC---CCCeeEEEEecCCCHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI---PTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +..+.++++|||||+|.||..++++|+++|++|++++|...........+....   ...++.++.+|++|.+.+.++++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            345778999999999999999999999999999999986543332222222111   12357889999999988877765


Q ss_pred             HHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                             .+|+|||.|+....  ..+.++....+++|+.|+.++++
T Consensus        90 -------~~d~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~nll~  126 (348)
T PRK15181         90 -------NVDYVLHQAALGSV--PRSLKDPIATNSANIDGFLNMLT  126 (348)
T ss_pred             -------CCCEEEECccccCc--hhhhhCHHHHHHHHHHHHHHHHH
Confidence                   48999999996432  11223345578999999988764

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.43  E-value=1.1e-12  Score=96.98  Aligned_cols=107  Identities=19%  Similarity=0.146  Sum_probs=82.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH--HHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD--VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+||||+|.||..+++.|+++|+.|..+.|+++....  ....+...  ..+...+..|+.|++++...++     
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a--~~~l~l~~aDL~d~~sf~~ai~-----   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGA--KERLKLFKADLLDEGSFDKAID-----   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccC--cccceEEeccccccchHHHHHh-----
Confidence            67999999999999999999999999999999999876322  23333322  3468899999999999999888     


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++|+|+|.|........ ++  -.+.++..+.|+.++.+
T Consensus        78 --gcdgVfH~Asp~~~~~~-~~--e~~li~pav~Gt~nVL~  113 (327)
T KOG1502|consen   78 --GCDGVFHTASPVDFDLE-DP--EKELIDPAVKGTKNVLE  113 (327)
T ss_pred             --CCCEEEEeCccCCCCCC-Cc--HHhhhhHHHHHHHHHHH
Confidence              79999999985432111 11  12688888888877653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.41  E-value=2.9e-12  Score=95.92  Aligned_cols=108  Identities=23%  Similarity=0.204  Sum_probs=78.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|+||..++++|+++|++|++++|...........+... ++.++.++.+|++|.+.+.++++.     .++|
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d   75 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL-GGKHPTFVEGDIRNEALLTEILHD-----HAID   75 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh-cCCCceEEEccCCCHHHHHHHHhc-----CCCC
Confidence            5899999999999999999999999998876533322222223221 134567889999999998887764     3699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+|+.....  ...+.....+++|+.++.++++
T Consensus        76 ~vvh~a~~~~~~--~~~~~~~~~~~~n~~~~~~l~~  109 (338)
T PRK10675         76 TVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRLIS  109 (338)
T ss_pred             EEEECCcccccc--chhhCHHHHHHHHHHHHHHHHH
Confidence            999999875321  1223345678899988887654

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.39  E-value=3.3e-12  Score=96.20  Aligned_cols=107  Identities=15%  Similarity=0.105  Sum_probs=75.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++||||++|+||..++++|+++|.+ |+.+++.... .. ...+....++.++.++.+|++|.+++.+++++.     ++
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYA-GN-LESLADVSDSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCcc-ch-HHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5899999999999999999999975 5555543211 01 111211111345778899999999999988753     79


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||....  ..+....+..+++|+.|+.++++
T Consensus        75 d~vih~A~~~~~--~~~~~~~~~~~~~N~~gt~~ll~  109 (352)
T PRK10084         75 DAVMHLAAESHV--DRSITGPAAFIETNIVGTYVLLE  109 (352)
T ss_pred             CEEEECCcccCC--cchhcCchhhhhhhhHHHHHHHH
Confidence            999999986432  12223346789999999998764

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.37  E-value=3.9e-12  Score=93.96  Aligned_cols=106  Identities=15%  Similarity=0.133  Sum_probs=76.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +++|||++|+||.+++++|++.|  .+|++.+|.... ..+....+..   ..++.++.+|++|++++.++++..     
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~-----   72 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED---NPRYRFVKGDIGDRELVSRLFTEH-----   72 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc---CCCcEEEEcCCcCHHHHHHHHhhc-----
Confidence            48999999999999999999987  688888764221 1111112211   235778899999999998888753     


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+|||+|+...  ...+.+.++..+++|+.++.++++
T Consensus        73 ~~d~vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~l~~  109 (317)
T TIGR01181        73 QPDAVVHFAAESH--VDRSISGPAAFIETNVVGTYTLLE  109 (317)
T ss_pred             CCCEEEEcccccC--chhhhhCHHHHHHHHHHHHHHHHH
Confidence            5999999998643  223344566788999999887754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.35  E-value=1.6e-11  Score=94.07  Aligned_cols=89  Identities=25%  Similarity=0.301  Sum_probs=68.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH--HHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD--VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+.++++++|||++|.||..++++|+++|++|+++.|+......  ...++...  ...+.++.+|++|.+++.++++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKE--LPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhh--cCCceEEEeeCCCHHHHHHHHHHh
Confidence            34678899999999999999999999999999999998654321  11112222  235778999999999999888754


Q ss_pred             HhcCCCccEEEEcccc
Q 044688          103 TTKGLPLNILINNAGI  118 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~  118 (147)
                         ..++|+||||++.
T Consensus       134 ---~~~~D~Vi~~aa~  146 (390)
T PLN02657        134 ---GDPVDVVVSCLAS  146 (390)
T ss_pred             ---CCCCcEEEECCcc
Confidence               1269999999885

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.34  E-value=8.7e-13  Score=92.31  Aligned_cols=117  Identities=15%  Similarity=0.124  Sum_probs=87.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..++++|+||+++|||..++..+..++-.....+++....+  .+.++..+ +........|++...-+.++++..+.++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~--~~~L~v~~-gd~~v~~~g~~~e~~~l~al~e~~r~k~   80 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE--LEGLKVAY-GDDFVHVVGDITEEQLLGALREAPRKKG   80 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc--ccceEEEe-cCCcceechHHHHHHHHHHHHhhhhhcC
Confidence            46789999999999999999999888765544444433222  22222222 2344455678888888889999999999


Q ss_pred             CCccEEEEccccCCCC-----CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASP-----FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~-----~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +..|++|||||..++.     ...+.++|++.+++|+++.+-|.+
T Consensus        81 gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~  125 (253)
T KOG1204|consen   81 GKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQ  125 (253)
T ss_pred             CceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHH
Confidence            9999999999987632     246789999999999999887653

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.33  E-value=9.1e-12  Score=92.32  Aligned_cols=106  Identities=21%  Similarity=0.239  Sum_probs=76.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|+||..++++|+++|++|+++++...........+..   ..++..+.+|+++.+++.++++.     +++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~-----~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGER---ITRVTFVEGDLRDRELLDRLFEE-----HKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcc---ccceEEEECCCCCHHHHHHHHHh-----CCCc
Confidence            479999999999999999999999998887643322222222221   12577888999999999888764     3799


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|||||.....  .+.++..+.++.|+.++..+++
T Consensus        73 ~vv~~ag~~~~~--~~~~~~~~~~~~n~~~~~~l~~  106 (328)
T TIGR01179        73 AVIHFAGLIAVG--ESVQDPLKYYRNNVVNTLNLLE  106 (328)
T ss_pred             EEEECccccCcc--hhhcCchhhhhhhHHHHHHHHH
Confidence            999999975321  1223445678888888877653

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.33  E-value=7.8e-12  Score=95.48  Aligned_cols=108  Identities=13%  Similarity=0.074  Sum_probs=75.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++|||||+|.||..++++|+++ |++|++++|+.+....+........ ..++.++.+|++|.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPW-SGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccC-CCCeEEEEcCCCChHHHHHHhh-----
Confidence            45578999999999999999999998 5899999987544332221100001 2368899999999988877665     


Q ss_pred             CCCccEEEEccccCCCCC-CCCHHHHHHhhhhhhhhhhhhc
Q 044688          106 GLPLNILINNAGIMASPF-MLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~-~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                        .+|+|||+|+...+.. ...+   ...+..|+.++.+++
T Consensus        86 --~~d~ViHlAa~~~~~~~~~~~---~~~~~~n~~gt~~ll  121 (386)
T PLN02427         86 --MADLTINLAAICTPADYNTRP---LDTIYSNFIDALPVV  121 (386)
T ss_pred             --cCCEEEEcccccChhhhhhCh---HHHHHHHHHHHHHHH
Confidence              4899999999653211 1111   234567888877654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.32  E-value=8.2e-12  Score=92.80  Aligned_cols=98  Identities=27%  Similarity=0.293  Sum_probs=75.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||++|+||..+++.|+++|++|++++|+.+....    +.    ...+.++.+|+++.+++.++++       .+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~D~~~~~~l~~~~~-------~~   65 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN----LE----GLDVEIVEGDLRDPASLRKAVA-------GC   65 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc----cc----cCCceEEEeeCCCHHHHHHHHh-------CC
Confidence            368999999999999999999999999999998654321    11    2357788999999998887765       58


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++||+|+....    ..+..+..+++|+.++.++++
T Consensus        66 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~   98 (328)
T TIGR03466        66 RALFHVAADYRL----WAPDPEEMYAANVEGTRNLLR   98 (328)
T ss_pred             CEEEEeceeccc----CCCCHHHHHHHHHHHHHHHHH
Confidence            999999985321    123356678899988887654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.31  E-value=2.6e-11  Score=83.45  Aligned_cols=85  Identities=19%  Similarity=0.219  Sum_probs=70.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++ |+|.+++++|+++|++|++++|+++..+.+...+..   ..++.++.+|++|++++.++++...+.++++|
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~---~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id   77 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT---PESITPLPLDYHDDDALKLAIKSTIEKNGPFD   77 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc---CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe
Confidence            58999998 677889999999999999999987655555443432   34788899999999999999999999899999


Q ss_pred             EEEEccccC
Q 044688          111 ILINNAGIM  119 (147)
Q Consensus       111 ~lv~~ag~~  119 (147)
                      ++|+.+-..
T Consensus        78 ~lv~~vh~~   86 (177)
T PRK08309         78 LAVAWIHSS   86 (177)
T ss_pred             EEEEecccc
Confidence            999887543

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.31  E-value=7.3e-12  Score=89.38  Aligned_cols=94  Identities=13%  Similarity=0.177  Sum_probs=72.2

Q ss_pred             CEEEEecC-CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGA-SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+=.||.. +||||.++|++|+++|++|+++++...        +..   ..   ...+|+++.+++.++++.+.+.+++
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~~---~~---~~~~Dv~d~~s~~~l~~~v~~~~g~   80 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LKP---EP---HPNLSIREIETTKDLLITLKELVQE   80 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------ccc---cc---CCcceeecHHHHHHHHHHHHHHcCC
Confidence            33456665 679999999999999999999876311        110   00   1358999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhh
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATN  137 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N  137 (147)
                      +|++|||||+..  +..+.+.++|++++..|
T Consensus        81 iDiLVnnAgv~d~~~~~~~s~e~~~~~~~~~  111 (227)
T TIGR02114        81 HDILIHSMAVSDYTPVYMTDLEQVQASDNLN  111 (227)
T ss_pred             CCEEEECCEeccccchhhCCHHHHhhhcchh
Confidence            999999999764  34467888998876554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.28  E-value=1.5e-11  Score=90.35  Aligned_cols=99  Identities=18%  Similarity=0.174  Sum_probs=74.7

Q ss_pred             EEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           33 IVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        33 litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      |||||+|.+|..++++|+++|  .+|.+.++......  ...+..   .....++.+|++|++++.++++       ++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~--~~~~~~---~~~~~~~~~Di~d~~~l~~a~~-------g~d   68 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKF--LKDLQK---SGVKEYIQGDITDPESLEEALE-------GVD   68 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEccccccccc--chhhhc---ccceeEEEeccccHHHHHHHhc-------CCc
Confidence            699999999999999999999  68888887654322  111111   1223389999999999998887       689


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+|+......   ....+..+++|+.|+-++.+
T Consensus        69 ~V~H~Aa~~~~~~---~~~~~~~~~vNV~GT~nvl~  101 (280)
T PF01073_consen   69 VVFHTAAPVPPWG---DYPPEEYYKVNVDGTRNVLE  101 (280)
T ss_pred             eEEEeCccccccC---cccHHHHHHHHHHHHHHHHH
Confidence            9999999754322   23456799999999988764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02686 cinnamoyl-CoA reductase

Probab=99.27  E-value=4.5e-11  Score=90.92  Aligned_cols=87  Identities=16%  Similarity=0.102  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC----CCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI----PTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ...++|++||||++|+||.+++++|+++|++|+++.|+.+....+ ..+....    .+..+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            456789999999999999999999999999999888875543333 2221110    01257788999999999988776


Q ss_pred             HHHhcCCCccEEEEccccC
Q 044688          101 DFTTKGLPLNILINNAGIM  119 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~  119 (147)
                             .+|.+||.|+..
T Consensus       128 -------~~d~V~hlA~~~  139 (367)
T PLN02686        128 -------GCAGVFHTSAFV  139 (367)
T ss_pred             -------hccEEEecCeee
Confidence                   478889988764

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.26  E-value=4.8e-11  Score=87.64  Aligned_cols=110  Identities=23%  Similarity=0.241  Sum_probs=86.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++|||||+|-||.+.+.+|.+.|+.|++++.-........+.+++.. ++..+.++..|+.|.+.++++|++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            5789999999999999999999999999999875444444444444443 2478999999999999999999987     


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+|.|+|-|+...  ...+.+......+.|+.|+.+++
T Consensus        77 ~fd~V~Hfa~~~~--vgeS~~~p~~Y~~nNi~gtlnlL  112 (343)
T KOG1371|consen   77 KFDAVMHFAALAA--VGESMENPLSYYHNNIAGTLNLL  112 (343)
T ss_pred             CCceEEeehhhhc--cchhhhCchhheehhhhhHHHHH
Confidence            6999999998653  22333444677888888888765

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.26  E-value=5.2e-11  Score=86.75  Aligned_cols=103  Identities=20%  Similarity=0.183  Sum_probs=83.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      .++|||||+|=||...+.+|++.|++|++++.-.....+.....       ...++..|+.|.+.+.++|++.     .|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~-------~~~f~~gDi~D~~~L~~vf~~~-----~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL-------QFKFYEGDLLDRALLTAVFEEN-----KI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc-------cCceEEeccccHHHHHHHHHhc-----CC
Confidence            36899999999999999999999999999998654433333211       1578999999999999999986     89


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |.|||.||..  ....+.++..+.++.|+.|+..|++
T Consensus        69 daViHFAa~~--~VgESv~~Pl~Yy~NNv~gTl~Ll~  103 (329)
T COG1087          69 DAVVHFAASI--SVGESVQNPLKYYDNNVVGTLNLIE  103 (329)
T ss_pred             CEEEECcccc--ccchhhhCHHHHHhhchHhHHHHHH
Confidence            9999999965  2344667778899999999988764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=3.7e-11  Score=87.35  Aligned_cols=107  Identities=17%  Similarity=0.180  Sum_probs=82.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|||||+|.||..+++.++++..  +|+.++.- -....+....+..   ..++.+++.|++|.+.+.+++.+.    
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~---~~~~~fv~~DI~D~~~v~~~~~~~----   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED---SPRYRFVQGDICDRELVDRLFKEY----   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc---CCCceEEeccccCHHHHHHHHHhc----
Confidence            4689999999999999999998753  46666652 1222222222322   468999999999999999999875    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+++|-|+-.  ..+-+.++.+.-+++|+.|++.|++
T Consensus        74 -~~D~VvhfAAES--HVDRSI~~P~~Fi~TNv~GT~~LLE  110 (340)
T COG1088          74 -QPDAVVHFAAES--HVDRSIDGPAPFIQTNVVGTYTLLE  110 (340)
T ss_pred             -CCCeEEEechhc--cccccccChhhhhhcchHHHHHHHH
Confidence             799999999854  5666777778899999999999864

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.22  E-value=3.7e-11  Score=88.94  Aligned_cols=89  Identities=17%  Similarity=0.140  Sum_probs=69.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|.||.+++++|.+.| +|+.++|...                   .+..|++|.+.+.++++..     ++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------------~~~~Dl~d~~~~~~~~~~~-----~~D   56 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------------DYCGDFSNPEGVAETVRKI-----RPD   56 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------------cccCCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999 7888776421                   1346999999998888754     689


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+|+....  +...++.+..+.+|+.++.++++
T Consensus        57 ~Vih~Aa~~~~--~~~~~~~~~~~~~N~~~~~~l~~   90 (299)
T PRK09987         57 VIVNAAAHTAV--DKAESEPEFAQLLNATSVEAIAK   90 (299)
T ss_pred             EEEECCccCCc--chhhcCHHHHHHHHHHHHHHHHH
Confidence            99999997542  22223345677889999887764

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.20  E-value=1.9e-10  Score=93.58  Aligned_cols=111  Identities=13%  Similarity=0.038  Sum_probs=77.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++++|||||+|.||..++++|++.  +++|+.+++... .... ..+.......++.++.+|++|.+.+.+++..   
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-~~~~-~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~---   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-CSNL-KNLNPSKSSPNFKFVKGDIASADLVNYLLIT---   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-cchh-hhhhhcccCCCeEEEECCCCChHHHHHHHhh---
Confidence            45689999999999999999999997  678988887431 1111 1111111134688899999999887766543   


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ..+|+|||+|+....  +.+..+....+++|+.|+.++++
T Consensus        79 --~~~D~ViHlAa~~~~--~~~~~~~~~~~~~Nv~gt~~ll~  116 (668)
T PLN02260         79 --EGIDTIMHFAAQTHV--DNSFGNSFEFTKNNIYGTHVLLE  116 (668)
T ss_pred             --cCCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHH
Confidence              279999999997532  11222334677899988887653

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.20  E-value=1.2e-10  Score=82.75  Aligned_cols=101  Identities=21%  Similarity=0.230  Sum_probs=78.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      +|||||+|.||.+++++|.++|..|+.+.|...........       .++.++.+|+.|.+.+.++++..     .+|.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~~~~~dl~~~~~~~~~~~~~-----~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK-------LNVEFVIGDLTDKEQLEKLLEKA-----NIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH-------TTEEEEESETTSHHHHHHHHHHH-----TESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc-------ceEEEEEeecccccccccccccc-----CceE
Confidence            69999999999999999999999988888876543322221       26889999999999999999976     7999


Q ss_pred             EEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          112 LINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |||+|+...  ...+.+.....++.|+.++.++++
T Consensus        69 vi~~a~~~~--~~~~~~~~~~~~~~n~~~~~~ll~  101 (236)
T PF01370_consen   69 VIHLAAFSS--NPESFEDPEEIIEANVQGTRNLLE  101 (236)
T ss_dssp             EEEEBSSSS--HHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             EEEeecccc--cccccccccccccccccccccccc
Confidence            999998642  112224566778888888776643

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.18  E-value=1.4e-10  Score=83.80  Aligned_cols=81  Identities=16%  Similarity=0.244  Sum_probs=59.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  105 (147)
                      ..+++++|||++|+||+.++++|++.|++|+++.|+.++....   + ..  +..+.++.+|+++. +.+.   +.+.  
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~-~~--~~~~~~~~~Dl~d~~~~l~---~~~~--   83 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTS---L-PQ--DPSLQIVRADVTEGSDKLV---EAIG--   83 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHh---c-cc--CCceEEEEeeCCCCHHHHH---HHhh--
Confidence            5568999999999999999999999999999999986543221   1 11  23578889999883 3332   2220  


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                       .++|+||+++|..
T Consensus        84 -~~~d~vi~~~g~~   96 (251)
T PLN00141         84 -DDSDAVICATGFR   96 (251)
T ss_pred             -cCCCEEEECCCCC
Confidence             2699999999864

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.18  E-value=8.6e-11  Score=88.52  Aligned_cols=100  Identities=10%  Similarity=0.102  Sum_probs=70.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~~  107 (147)
                      ++++|||++|.||..++++|++. |++|++++|+.+...    .+.   +...+.++.+|++ +.+.+.++++       
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~---~~~~~~~~~~Dl~~~~~~~~~~~~-------   67 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLV---NHPRMHFFEGDITINKEWIEYHVK-------   67 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----Hhc---cCCCeEEEeCCCCCCHHHHHHHHc-------
Confidence            46999999999999999999986 689999988643211    121   1235788899997 6665555443       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+|+|||+|+...+..  ..++.+..+++|+.|+.++.
T Consensus        68 ~~d~ViH~aa~~~~~~--~~~~p~~~~~~n~~~~~~ll  103 (347)
T PRK11908         68 KCDVILPLVAIATPAT--YVKQPLRVFELDFEANLPIV  103 (347)
T ss_pred             CCCEEEECcccCChHH--hhcCcHHHHHHHHHHHHHHH
Confidence            5899999998653211  12233456788888877765

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.16  E-value=1.3e-10  Score=94.39  Aligned_cols=104  Identities=13%  Similarity=0.092  Sum_probs=73.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHH-HHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLAS-VRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~  104 (147)
                      -.++++|||||+|.||..++++|+++ |++|++++|.......    +.   +..++.++.+|++|... +.++++    
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~---~~~~~~~~~gDl~d~~~~l~~~l~----  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FL---GHPRFHFVEGDISIHSEWIEYHIK----  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hc---CCCceEEEeccccCcHHHHHHHhc----
Confidence            45678999999999999999999986 7999999987543211    11   12357788999998654 333332    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+|||+|+...+..  ..+..+..+++|+.++.++.+
T Consensus       382 ---~~D~ViHlAa~~~~~~--~~~~~~~~~~~Nv~~t~~ll~  418 (660)
T PRK08125        382 ---KCDVVLPLVAIATPIE--YTRNPLRVFELDFEENLKIIR  418 (660)
T ss_pred             ---CCCEEEECccccCchh--hccCHHHHHHhhHHHHHHHHH
Confidence               5899999999754321  112234577889888877653

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.14  E-value=1.4e-10  Score=84.54  Aligned_cols=84  Identities=27%  Similarity=0.367  Sum_probs=72.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      +||||++|.+|.++++.|. .+.+|+.+++..                       +|++|.+.+.+++.+.     ++|+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------------~Ditd~~~v~~~i~~~-----~PDv   53 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------------LDITDPDAVLEVIRET-----RPDV   53 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------------ccccChHHHHHHHHhh-----CCCE
Confidence            8999999999999999998 668999888751                       7999999999999987     8999


Q ss_pred             EEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          112 LINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |||+|++..  .+..+.+.+..+.+|..|+.++++
T Consensus        54 VIn~AAyt~--vD~aE~~~e~A~~vNa~~~~~lA~   86 (281)
T COG1091          54 VINAAAYTA--VDKAESEPELAFAVNATGAENLAR   86 (281)
T ss_pred             EEECccccc--cccccCCHHHHHHhHHHHHHHHHH
Confidence            999999863  344555567899999999998865

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.13  E-value=2.2e-10  Score=83.90  Aligned_cols=86  Identities=22%  Similarity=0.310  Sum_probs=67.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|.||.+++++|.++|++|+++.|.                       .+|+.+.+.+.++++..     .+|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------------~~d~~~~~~~~~~~~~~-----~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------------QLDLTDPEALERLLRAI-----RPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------------ccCCCCHHHHHHHHHhC-----CCC
Confidence            37999999999999999999999999998874                       36999999998887753     689


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++||+|+....  .......+..+++|+.++.++++
T Consensus        53 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~   86 (287)
T TIGR01214        53 AVVNTAAYTDV--DGAESDPEKAFAVNALAPQNLAR   86 (287)
T ss_pred             EEEECCccccc--cccccCHHHHHHHHHHHHHHHHH
Confidence            99999986532  11223345678899988877653

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.12  E-value=2.9e-10  Score=84.77  Aligned_cols=73  Identities=19%  Similarity=0.215  Sum_probs=59.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++||||+|.+|..++++|+++|++|++++|+.+...    .+.    ...+.++.+|++|++++.++++       ++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~----~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d   66 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS----FLK----EWGAELVYGDLSLPETLPPSFK-------GVT   66 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh----hHh----hcCCEEEECCCCCHHHHHHHHC-------CCC
Confidence            6999999999999999999999999999999854321    121    1247788999999998877665       689


Q ss_pred             EEEEcccc
Q 044688          111 ILINNAGI  118 (147)
Q Consensus       111 ~lv~~ag~  118 (147)
                      ++||+++.
T Consensus        67 ~Vi~~~~~   74 (317)
T CHL00194         67 AIIDASTS   74 (317)
T ss_pred             EEEECCCC
Confidence            99998764

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.12  E-value=2.8e-10  Score=84.03  Aligned_cols=99  Identities=23%  Similarity=0.200  Sum_probs=73.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      +||||++|.||..++++|.++|++|+.++|.........         ..+.++.+|+++.+.+...++..     . |.
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~d~~~~~~~~~~~~~~-----~-d~   67 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL---------SGVEFVVLDLTDRDLVDELAKGV-----P-DA   67 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc---------cccceeeecccchHHHHHHHhcC-----C-CE
Confidence            999999999999999999999999999999755432221         24677889999886555554422     1 99


Q ss_pred             EEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          112 LINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||+|+.......... .....+.+|+.++.++++
T Consensus        68 vih~aa~~~~~~~~~~-~~~~~~~~nv~gt~~ll~  101 (314)
T COG0451          68 VIHLAAQSSVPDSNAS-DPAEFLDVNVDGTLNLLE  101 (314)
T ss_pred             EEEccccCchhhhhhh-CHHHHHHHHHHHHHHHHH
Confidence            9999997643222221 345688999999888764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.11  E-value=7.9e-11  Score=86.79  Aligned_cols=86  Identities=29%  Similarity=0.373  Sum_probs=66.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|.+|.++.+.|.+.|++|+.++|+                       .+|++|.+.+.+++++.     .+|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-----------------------~~dl~d~~~~~~~~~~~-----~pd   53 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS-----------------------DLDLTDPEAVAKLLEAF-----KPD   53 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-----------------------CS-TTSHHHHHHHHHHH-------S
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-----------------------hcCCCCHHHHHHHHHHh-----CCC
Confidence            68999999999999999999999999988765                       57999999999999987     799


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+||+.  ..+..+++.+..+.+|+.++.+|++
T Consensus        54 ~Vin~aa~~--~~~~ce~~p~~a~~iN~~~~~~la~   87 (286)
T PF04321_consen   54 VVINCAAYT--NVDACEKNPEEAYAINVDATKNLAE   87 (286)
T ss_dssp             EEEE--------HHHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             eEeccceee--cHHhhhhChhhhHHHhhHHHHHHHH
Confidence            999999975  2334455667899999999988764

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.11  E-value=8.5e-10  Score=82.89  Aligned_cols=104  Identities=21%  Similarity=0.240  Sum_probs=71.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccc---hHHHHHHHhhCC-----C-CeeEEEEecCCCHH------
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAG---TDVKDAIVKEIP-----T-AKVDVLELDLSSLA------   93 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~---~~~~~~l~~~~~-----~-~~~~~~~~D~~~~~------   93 (147)
                      +++|||++|+||..++++|+++|  ++|+++.|+.+..   +.+.+.+.....     . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  6899999976521   222222222110     1 46889999998642      


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           94 SVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ....+.       ..+|++||||+.....     ..++..+++|+.|+.++++
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~-----~~~~~~~~~nv~g~~~ll~  121 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV-----YPYSELRAANVLGTREVLR  121 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC-----CcHHHHhhhhhHHHHHHHH
Confidence            232222       3699999999965311     2245677888888877654

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.10  E-value=4.9e-10  Score=87.19  Aligned_cols=108  Identities=19%  Similarity=0.253  Sum_probs=74.3

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +.....+++++||||++|.||..++++|+++|++|+++++......+.   +.......++.++..|+.+..     +  
T Consensus       112 ~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~~~~~~~~~~i~~D~~~~~-----l--  181 (442)
T PLN02206        112 PLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMHHFSNPNFELIRHDVVEPI-----L--  181 (442)
T ss_pred             ccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhhhccCCceEEEECCccChh-----h--
Confidence            333456779999999999999999999999999999988754322111   111111345777788886652     1  


Q ss_pred             HHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                           ..+|+|||+|+...+..  ...+....+++|+.|+.++.+
T Consensus       182 -----~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gt~nLle  219 (442)
T PLN02206        182 -----LEVDQIYHLACPASPVH--YKFNPVKTIKTNVVGTLNMLG  219 (442)
T ss_pred             -----cCCCEEEEeeeecchhh--hhcCHHHHHHHHHHHHHHHHH
Confidence                 15899999998653211  112345688999999988754

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.09  E-value=7.3e-10  Score=84.41  Aligned_cols=103  Identities=17%  Similarity=0.148  Sum_probs=71.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++++|||++|.||.++++.|.++|++|++++|.....      +...  .....++.+|+++.+.+.+++.       
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~--~~~~~~~~~Dl~d~~~~~~~~~-------   84 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSED--MFCHEFHLVDLRVMENCLKVTK-------   84 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccc--cccceEEECCCCCHHHHHHHHh-------
Confidence            678999999999999999999999999999999864311      0000  1124567889999887766553       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+|+|||+|+..... .....+....+..|+.++.++++
T Consensus        85 ~~D~Vih~Aa~~~~~-~~~~~~~~~~~~~N~~~t~nll~  122 (370)
T PLN02695         85 GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMLE  122 (370)
T ss_pred             CCCEEEEcccccCCc-cccccCchhhHHHHHHHHHHHHH
Confidence            589999999854211 11111223456678887776653

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=99.08  E-value=7.5e-10  Score=84.91  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=61.7

Q ss_pred             CCCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           26 DATGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ++.||+++||||                +|.+|.++|++|+++|++|++++++.+ ..         .+. .  ...+|+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~---------~~~-~--~~~~dv  251 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP---------TPA-G--VKRIDV  251 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc---------CCC-C--cEEEcc
Confidence            478999999999                455999999999999999999988642 11         011 1  246799


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           90 SSLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      ++.+++.+.+.   +.++.+|++|||||+..
T Consensus       252 ~~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        252 ESAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CCHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            98888776665   45788999999999863

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.06  E-value=7.9e-10  Score=81.90  Aligned_cols=99  Identities=18%  Similarity=0.268  Sum_probs=65.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh--cCCCc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT--KGLPL  109 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~~i  109 (147)
                      +|||||+|.||..++++|++.|++++++.++.+..... ..           ...+|+.|..+...+++.+..  .++.+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~   69 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN-----------LVDLDIADYMDKEDFLAQIMAGDDFGDI   69 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh-----------hhhhhhhhhhhHHHHHHHHhcccccCCc
Confidence            79999999999999999999998766665553321110 01           123566666555555555432  34579


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||..... ....   +..++.|+.++.++++
T Consensus        70 d~Vih~A~~~~~~-~~~~---~~~~~~n~~~t~~ll~  102 (308)
T PRK11150         70 EAIFHEGACSSTT-EWDG---KYMMDNNYQYSKELLH  102 (308)
T ss_pred             cEEEECceecCCc-CCCh---HHHHHHHHHHHHHHHH
Confidence            9999999864321 2222   3468999999887754

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.06  E-value=3.4e-10  Score=81.97  Aligned_cols=112  Identities=17%  Similarity=0.200  Sum_probs=87.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+|++||||-+|.-|..+|+.|++.|+.|+.+.|..+......-.|...  ..+.++.+..+|++|..++.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            3689999999999999999999999999999988643221110022211  01356889999999999999999998   


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        .+|-|+|-|+-  +....+.++.....+++..|+.+|+.
T Consensus        78 --~PdEIYNLaAQ--S~V~vSFe~P~~T~~~~~iGtlrlLE  114 (345)
T COG1089          78 --QPDEIYNLAAQ--SHVGVSFEQPEYTADVDAIGTLRLLE  114 (345)
T ss_pred             --Cchhheecccc--ccccccccCcceeeeechhHHHHHHH
Confidence              89999999884  45667777777888888888887653

>PLN02996 fatty acyl-CoA reductase

Probab=99.06  E-value=1.9e-09  Score=85.00  Aligned_cols=109  Identities=17%  Similarity=0.206  Sum_probs=75.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC---CEEEEEEccCcc---chHHHHH---------HHhhCC-------CCeeE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAA---GTDVKDA---------IVKEIP-------TAKVD   83 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~   83 (147)
                      .+++|+++|||++|.+|+.++++|++.+   .+|+++.|....   .+.+..+         +++..+       ..++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            4789999999999999999999999764   368888886532   1111111         111111       14789


Q ss_pred             EEEecCCC-------HHHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           84 VLELDLSS-------LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        84 ~~~~D~~~-------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+|+++       .+.+.++++       .+|+|||+|+....  .   +..+..+++|+.|+.++++
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~--~---~~~~~~~~~Nv~gt~~ll~  145 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF--D---ERYDVALGINTLGALNVLN  145 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC--c---CCHHHHHHHHHHHHHHHHH
Confidence            99999984       333444443       59999999996542  1   2456789999999987654

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.05  E-value=1.8e-10  Score=82.71  Aligned_cols=80  Identities=28%  Similarity=0.324  Sum_probs=64.7

Q ss_pred             HHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEEccccCCCCCC
Q 044688           45 TTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM  124 (147)
Q Consensus        45 ~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~  124 (147)
                      +|++|+++|++|++++|+.++.+     .        ..++.+|++|.+++.++++++.   +++|+||||||+..    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~-----~--------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~----   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT-----L--------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG----   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh-----h--------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC----
Confidence            47899999999999999865421     1        1246899999999999988764   68999999999752    


Q ss_pred             CCHHHHHHhhhhhhhhhhhhcc
Q 044688          125 LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       125 ~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        .+.+++.+++|+.+++++++
T Consensus        61 --~~~~~~~~~vN~~~~~~l~~   80 (241)
T PRK12428         61 --TAPVELVARVNFLGLRHLTE   80 (241)
T ss_pred             --CCCHHHhhhhchHHHHHHHH
Confidence              23578999999999998875

>PLN02778 3,5-epimerase/4-reductase

Probab=99.05  E-value=1.1e-09  Score=81.25  Aligned_cols=86  Identities=19%  Similarity=0.221  Sum_probs=63.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +++||||++|.||..++++|.++|++|+...                          .|+.+.+.+...++..     ++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~--------------------------~~~~~~~~v~~~l~~~-----~~   58 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS--------------------------GRLENRASLEADIDAV-----KP   58 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec--------------------------CccCCHHHHHHHHHhc-----CC
Confidence            6799999999999999999999999886421                          2344455555555432     68


Q ss_pred             cEEEEccccCCCC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||..... .+...++....+++|+.|+.++++
T Consensus        59 D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~   96 (298)
T PLN02778         59 THVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLAD   96 (298)
T ss_pred             CEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHH
Confidence            9999999976432 122334556789999999988764

>PRK05865 hypothetical protein; Provisional

Probab=99.04  E-value=1.3e-09  Score=90.18  Aligned_cols=86  Identities=20%  Similarity=0.196  Sum_probs=68.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|.||.+++++|+++|++|++++|+....      +     ...+.++.+|++|.+++.++++       .+|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-----~~~v~~v~gDL~D~~~l~~al~-------~vD   63 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-----PSSADFIAADIRDATAVESAMT-------GAD   63 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-----ccCceEEEeeCCCHHHHHHHHh-------CCC
Confidence            599999999999999999999999999999874210      1     1246788999999998887775       589


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +|||+|+...+           .+++|+.++.+++
T Consensus        64 ~VVHlAa~~~~-----------~~~vNv~GT~nLL   87 (854)
T PRK05865         64 VVAHCAWVRGR-----------NDHINIDGTANVL   87 (854)
T ss_pred             EEEECCCcccc-----------hHHHHHHHHHHHH
Confidence            99999985421           3567777776654

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.04  E-value=1.7e-09  Score=74.30  Aligned_cols=71  Identities=27%  Similarity=0.321  Sum_probs=62.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      ++|+|++|.+|+.++++|+++|++|+++.|++++.++          ..++..+.+|+.|++++.+.+.       +.|.
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~----------~~~~~~~~~d~~d~~~~~~al~-------~~d~   63 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED----------SPGVEIIQGDLFDPDSVKAALK-------GADA   63 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH----------CTTEEEEESCTTCHHHHHHHHT-------TSSE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc----------ccccccceeeehhhhhhhhhhh-------hcch
Confidence            6899999999999999999999999999999876554          2578899999999988887766       6999


Q ss_pred             EEEccccC
Q 044688          112 LINNAGIM  119 (147)
Q Consensus       112 lv~~ag~~  119 (147)
                      +|+++|..
T Consensus        64 vi~~~~~~   71 (183)
T PF13460_consen   64 VIHAAGPP   71 (183)
T ss_dssp             EEECCHST
T ss_pred             hhhhhhhh
Confidence            99999754

...

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.04  E-value=2e-09  Score=83.73  Aligned_cols=105  Identities=18%  Similarity=0.189  Sum_probs=72.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .....++++|||++|.||..++++|+++|++|++++|......+....+..   ..++.++..|+.+..     +     
T Consensus       116 ~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~-----~-----  182 (436)
T PLN02166        116 IGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG---NPRFELIRHDVVEPI-----L-----  182 (436)
T ss_pred             cccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc---CCceEEEECcccccc-----c-----
Confidence            345667899999999999999999999999999998864322221111211   235677788886542     1     


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        .++|+|||+|+......  ...+....+++|+.|+.++++
T Consensus       183 --~~~D~ViHlAa~~~~~~--~~~~p~~~~~~Nv~gT~nLle  220 (436)
T PLN02166        183 --LEVDQIYHLACPASPVH--YKYNPVKTIKTNVMGTLNMLG  220 (436)
T ss_pred             --cCCCEEEECceeccchh--hccCHHHHHHHHHHHHHHHHH
Confidence              25899999998653221  112235688899999888753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.02  E-value=1.4e-09  Score=80.48  Aligned_cols=99  Identities=14%  Similarity=0.120  Sum_probs=69.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +||||++|.||..+++.|.++|+ .|++++|..... .. .++     ..  ..+..|+++.+.+..+.+.   .+..+|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~-----~~--~~~~~d~~~~~~~~~~~~~---~~~~~D   68 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNL-----AD--LVIADYIDKEDFLDRLEKG---AFGKIE   68 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhh-----hh--eeeeccCcchhHHHHHHhh---ccCCCC
Confidence            58999999999999999999997 788887754321 11 111     11  2456788877766655442   345799


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+|+...    .+.++.+..+++|+.++.++++
T Consensus        69 ~vvh~A~~~~----~~~~~~~~~~~~n~~~~~~ll~  100 (314)
T TIGR02197        69 AIFHQGACSD----TTETDGEYMMENNYQYSKRLLD  100 (314)
T ss_pred             EEEECccccC----ccccchHHHHHHHHHHHHHHHH
Confidence            9999999643    1233456788999999888754

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=99.02  E-value=2.2e-09  Score=79.25  Aligned_cols=84  Identities=20%  Similarity=0.234  Sum_probs=64.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+++|+++|+|+ ||+|++++..|++.|++ |++++|+.   ++.+++.+++.+..  ..+....+|+++.+++.+.++ 
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~--~~~~~~~~d~~~~~~~~~~~~-  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEV--PECIVNVYDLNDTEKLKAEIA-  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcC--CCceeEEechhhhhHHHhhhc-
Confidence            467899999999 69999999999999985 99999986   55666666665442  344556678877776655444 


Q ss_pred             HHhcCCCccEEEEccccC
Q 044688          102 FTTKGLPLNILINNAGIM  119 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~  119 (147)
                            ..|+||||.-+.
T Consensus       199 ------~~DilINaTp~G  210 (289)
T PRK12548        199 ------SSDILVNATLVG  210 (289)
T ss_pred             ------cCCEEEEeCCCC
Confidence                  469999998553

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.00  E-value=3.6e-09  Score=84.84  Aligned_cols=108  Identities=13%  Similarity=0.179  Sum_probs=75.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC---CEEEEEEccCcc---chHHHHH---------HHhhCC-------CCeeEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAA---GTDVKDA---------IVKEIP-------TAKVDV   84 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~---~~~~~~~---------l~~~~~-------~~~~~~   84 (147)
                      +++|+++|||++|.+|+.++++|++.+   .+|+++.|....   .+.+.++         +++..+       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            689999999999999999999999865   378998886432   2222222         222221       247889


Q ss_pred             EEecCCCHH------HHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           85 LELDLSSLA------SVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        85 ~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +..|++++.      ..+.+.+       .+|+|||+|+....  +   +.++..+++|+.|+.++++
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f--~---~~~~~a~~vNV~GT~nLLe  252 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF--D---ERYDVAIDINTRGPCHLMS  252 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc--c---cCHHHHHHHHHHHHHHHHH
Confidence            999999872      3333222       59999999986531  1   3466789999999888764

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.95  E-value=1.7e-09  Score=79.77  Aligned_cols=86  Identities=19%  Similarity=0.117  Sum_probs=63.4

Q ss_pred             EEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEE
Q 044688           33 IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNIL  112 (147)
Q Consensus        33 litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l  112 (147)
                      |||||+|.||..+++.|++.|+.|+++.+.                      ..+|+++.+++.++++..     .+|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------------~~~Dl~~~~~l~~~~~~~-----~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------------KELDLTRQADVEAFFAKE-----KPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------------ccCCCCCHHHHHHHHhcc-----CCCEE
Confidence            699999999999999999999887765421                      137999999888887753     68999


Q ss_pred             EEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          113 INNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       113 v~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ||+|+....... ..++....+++|+.++.++++
T Consensus        54 ih~A~~~~~~~~-~~~~~~~~~~~n~~~~~~ll~   86 (306)
T PLN02725         54 ILAAAKVGGIHA-NMTYPADFIRENLQIQTNVID   86 (306)
T ss_pred             EEeeeeecccch-hhhCcHHHHHHHhHHHHHHHH
Confidence            999987531111 112234567788888877653

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.93  E-value=3.8e-09  Score=77.28  Aligned_cols=95  Identities=18%  Similarity=0.087  Sum_probs=64.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      +||||++|.||..+++.|+++|++|++++|+.+.......        ..    ..|+.. ..+       .+....+|+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~----~~~~~~-~~~-------~~~~~~~D~   60 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG----YKPWAP-LAE-------SEALEGADA   60 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee----eecccc-cch-------hhhcCCCCE
Confidence            5899999999999999999999999999998764322110        00    112221 111       223357999


Q ss_pred             EEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          112 LINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |||+||..........+..+..+++|+.++.++++
T Consensus        61 Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   95 (292)
T TIGR01777        61 VINLAGEPIADKRWTEERKQEIRDSRIDTTRALVE   95 (292)
T ss_pred             EEECCCCCcccccCCHHHHHHHHhcccHHHHHHHH
Confidence            99999964322234445566788899888877653

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.92  E-value=1.4e-09  Score=78.59  Aligned_cols=101  Identities=22%  Similarity=0.234  Sum_probs=60.6

Q ss_pred             EecCCCchhHHHHHHHHHCCC--EEEEEEccCcc---chHHHHHHHhhC--------CCCeeEEEEecCCCHH------H
Q 044688           34 VTGASSGIGAETTRVLALRGV--HVFMAVRNMAA---GTDVKDAIVKEI--------PTAKVDVLELDLSSLA------S   94 (147)
Q Consensus        34 itG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~---~~~~~~~l~~~~--------~~~~~~~~~~D~~~~~------~   94 (147)
                      |||+||.+|..+..+|++++.  +|+++.|....   .+++.+.+.+..        ...++.++.+|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999876  89999997532   222222211100        0468999999999853      3


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ...+.+       .+|+|||||+.....  .   .++...++|+.|+.++++
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~--~---~~~~~~~~NV~gt~~ll~  120 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFN--A---PYSELRAVNVDGTRNLLR  120 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS------S--EEHHHHHHHHHHHHH
T ss_pred             hhcccc-------ccceeeecchhhhhc--c---cchhhhhhHHHHHHHHHH
Confidence            333333       599999999864311  1   355688899999988765

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=98.92  E-value=4.2e-09  Score=79.36  Aligned_cols=107  Identities=16%  Similarity=0.204  Sum_probs=77.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++.+++||||+|.+|..++.+|.+.+  .++.+.+..+.... ...+..... ..++.++.+|+.|..++.+.+.    
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~-~~~e~~~~~-~~~v~~~~~D~~~~~~i~~a~~----   75 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSN-LPAELTGFR-SGRVTVILGDLLDANSISNAFQ----   75 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccc-cchhhhccc-CCceeEEecchhhhhhhhhhcc----
Confidence            457899999999999999999999988  68999888764211 111111101 5689999999999998887766    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                         +. .+||+|+...+  .....+.+..+++|+.|+.++.
T Consensus        76 ---~~-~Vvh~aa~~~~--~~~~~~~~~~~~vNV~gT~nvi  110 (361)
T KOG1430|consen   76 ---GA-VVVHCAASPVP--DFVENDRDLAMRVNVNGTLNVI  110 (361)
T ss_pred             ---Cc-eEEEeccccCc--cccccchhhheeecchhHHHHH
Confidence               56 78888875422  2233356788999999976643

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.91  E-value=9.5e-09  Score=83.36  Aligned_cols=105  Identities=21%  Similarity=0.151  Sum_probs=70.1

Q ss_pred             EEEEecCCCchhHHHHHHHH--HCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHH--HHHHHHHHhcC
Q 044688           31 TAIVTGASSGIGAETTRVLA--LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASV--RKFASDFTTKG  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~--~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~  106 (147)
                      ++||||++|.||..++++|+  ..|++|++++|+... ... ..+.......++.++.+|++|++..  ...++++    
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----   75 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRL-EALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----   75 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHH-HHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence            69999999999999999999  578999999996432 222 2222222124688899999985310  1112222    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ..+|+|||+||....  ..+   .....++|+.|+.++++
T Consensus        76 ~~~D~Vih~Aa~~~~--~~~---~~~~~~~nv~gt~~ll~  110 (657)
T PRK07201         76 GDIDHVVHLAAIYDL--TAD---EEAQRAANVDGTRNVVE  110 (657)
T ss_pred             cCCCEEEECceeecC--CCC---HHHHHHHHhHHHHHHHH
Confidence            379999999996532  112   24566788888877653

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.90  E-value=2e-08  Score=70.02  Aligned_cols=85  Identities=19%  Similarity=0.252  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++++++|+|++|++|+.+++.|++.|++|++++|+.++.+++.+.+.+.. +  .....+|..+.+++.+.+.    
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~--~~~~~~~~~~~~~~~~~~~----   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-G--EGVGAVETSDDAARAAAIK----   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-C--CcEEEeeCCCHHHHHHHHh----
Confidence            35788999999999999999999999999999999999877777776665332 2  3345678888887776664    


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                         ..|++|++....
T Consensus        97 ---~~diVi~at~~g  108 (194)
T cd01078          97 ---GADVVFAAGAAG  108 (194)
T ss_pred             ---cCCEEEECCCCC
Confidence               579999876543

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.84  E-value=2.2e-08  Score=76.72  Aligned_cols=79  Identities=19%  Similarity=0.296  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecC---------------CCc-hhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           26 DATGLTAIVTGA---------------SSG-IGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~---------------~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      +++||+++||||               |+| +|.++|++|..+|++|++++++....          . ...  ...+|+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------~-~~~--~~~~~v  248 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------T-PPG--VKSIKV  248 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------C-CCC--cEEEEe
Confidence            478999999999               556 99999999999999999988764321          1 111  245799


Q ss_pred             CCHHHH-HHHHHHHHhcCCCccEEEEccccCC
Q 044688           90 SSLASV-RKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        90 ~~~~~~-~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      ++.+++ .+++++.   ++.+|++|+|||+.+
T Consensus       249 ~~~~~~~~~~~~~~---~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       249 STAEEMLEAALNEL---AKDFDIFISAAAVAD  277 (390)
T ss_pred             ccHHHHHHHHHHhh---cccCCEEEEcccccc
Confidence            988888 5555443   467999999999864

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.83  E-value=1.8e-08  Score=82.11  Aligned_cols=87  Identities=16%  Similarity=0.147  Sum_probs=67.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+++||||++|.||.++++.|.++|++|..                          ...|++|.+.+.+.+.+.     +
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~--------------------------~~~~l~d~~~v~~~i~~~-----~  428 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY--------------------------GKGRLEDRSSLLADIRNV-----K  428 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe--------------------------eccccccHHHHHHHHHhh-----C
Confidence            357999999999999999999999987621                          013577888887777764     6


Q ss_pred             ccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+|+.... ..+...++.+..+++|+.|+.++++
T Consensus       429 pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~  467 (668)
T PLN02260        429 PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLAD  467 (668)
T ss_pred             CCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHH
Confidence            9999999997643 2334455667889999999988764

>PRK12320 hypothetical protein; Provisional

Probab=98.75  E-value=4.2e-08  Score=79.81  Aligned_cols=86  Identities=21%  Similarity=0.220  Sum_probs=62.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|.||..++++|+++|++|++++|....       .  .  ...+.++.+|+++.. +.+++.       .+|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~-------~--~--~~~ve~v~~Dl~d~~-l~~al~-------~~D   62 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD-------A--L--DPRVDYVCASLRNPV-LQELAG-------EAD   62 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh-------c--c--cCCceEEEccCCCHH-HHHHhc-------CCC
Confidence            59999999999999999999999999999986431       0  0  235778899999874 433332       589


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      ++||+|+....    .      ...+|+.|+.+++
T Consensus        63 ~VIHLAa~~~~----~------~~~vNv~Gt~nLl   87 (699)
T PRK12320         63 AVIHLAPVDTS----A------PGGVGITGLAHVA   87 (699)
T ss_pred             EEEEcCccCcc----c------hhhHHHHHHHHHH
Confidence            99999986321    0      1136677666554

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.73  E-value=1e-07  Score=68.26  Aligned_cols=97  Identities=13%  Similarity=0.224  Sum_probs=63.2

Q ss_pred             CEEEEecCCC-chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASS-GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~-giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+-.||..++ ++|.++|++|+++|++|+++++.....        .. +...+.++.++  +.   .++.+.+.+.++.
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~--------~~-~~~~v~~i~v~--s~---~~m~~~l~~~~~~   81 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK--------PE-PHPNLSIIEIE--NV---DDLLETLEPLVKD   81 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECccccc--------CC-CCCCeEEEEEe--cH---HHHHHHHHHHhcC
Confidence            3567887765 499999999999999999998753210        00 01234444433  22   2223333333457


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhh
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLG  140 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g  140 (147)
                      +|++|||||+..  +....+.+++..++++|.+.
T Consensus        82 ~DivIh~AAvsd~~~~~~~~~~~~~~~~~v~~~~  115 (229)
T PRK06732         82 HDVLIHSMAVSDYTPVYMTDLEEVSASDNLNEFL  115 (229)
T ss_pred             CCEEEeCCccCCceehhhhhhhhhhhhhhhhhhh
Confidence            999999999865  22346778888888888654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=98.73  E-value=4e-08  Score=72.07  Aligned_cols=76  Identities=16%  Similarity=0.140  Sum_probs=58.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC-c
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP-L  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-i  109 (147)
                      +++|||++|.+|..++++|++.|++|.++.|++++..           ...+..+.+|+.|++++...++.. ..+.+ +
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~   68 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-----------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEI   68 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-----------CCCCccccccCCCHHHHHHHHhcc-cCcCCce
Confidence            3799999999999999999999999999999876432           112445678999999888877542 23335 8


Q ss_pred             cEEEEcccc
Q 044688          110 NILINNAGI  118 (147)
Q Consensus       110 d~lv~~ag~  118 (147)
                      |.++++++.
T Consensus        69 d~v~~~~~~   77 (285)
T TIGR03649        69 SAVYLVAPP   77 (285)
T ss_pred             eEEEEeCCC
Confidence            888888763

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.69  E-value=1.1e-07  Score=71.48  Aligned_cols=105  Identities=23%  Similarity=0.275  Sum_probs=72.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCc---cchHHHHHHH-----hhCCCCeeEEEEecCC------CHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMA---AGTDVKDAIV-----KEIPTAKVDVLELDLS------SLAS   94 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~---~~~~~~~~l~-----~~~~~~~~~~~~~D~~------~~~~   94 (147)
                      +++|+|||||.+|..+..+|+..- ++|++..|-.+   ..+++.+.+.     ++.-..++..+..|++      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            479999999999999999999764 69999888533   2344444433     1111468999999998      3445


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++.+       .+|.||||++...-   +  ..+.+....|+.|+..+.+
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~---v--~pYs~L~~~NVlGT~evlr  120 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNH---V--FPYSELRGANVLGTAEVLR  120 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcc---c--CcHHHhcCcchHhHHHHHH
Confidence            555554       59999999986431   1  1245567778888776654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.59  E-value=4.1e-07  Score=70.66  Aligned_cols=109  Identities=19%  Similarity=0.277  Sum_probs=76.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC---CEEEEEEccCcc---chH--------HHHHHHhhCCC--CeeEEEEecC
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAA---GTD--------VKDAIVKEIPT--AKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~---~~~--------~~~~l~~~~~~--~~~~~~~~D~   89 (147)
                      .+++|+++||||+|.+|+-+.++|+..-   -++++.-|....   .+.        +.+.+++..|.  .++..+.+|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            4789999999999999999999999753   278888885421   111        22333444332  4788888898


Q ss_pred             CCH------HHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           90 SSL------ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        90 ~~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++      .+...+.+       .+|++||+|+-...     .|.++....+|..|+.++.+
T Consensus        89 ~~~~LGis~~D~~~l~~-------eV~ivih~AAtvrF-----de~l~~al~iNt~Gt~~~l~  139 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLAD-------EVNIVIHSAATVRF-----DEPLDVALGINTRGTRNVLQ  139 (467)
T ss_pred             cCcccCCChHHHHHHHh-------cCCEEEEeeeeecc-----chhhhhhhhhhhHhHHHHHH
Confidence            754      33332222       69999999986532     24567789999999887764

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.54  E-value=4.8e-07  Score=69.01  Aligned_cols=76  Identities=26%  Similarity=0.432  Sum_probs=64.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +.++|.|+ |++|+.+|..|++.| .+|++.+|+.++..++....     ..++.+..+|+.|.+.+.+++++       
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~-----~~~v~~~~vD~~d~~al~~li~~-------   68 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI-----GGKVEALQVDAADVDALVALIKD-------   68 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc-----cccceeEEecccChHHHHHHHhc-------
Confidence            56889998 999999999999999 79999999977766655543     34889999999999999888873       


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      .|++||++..
T Consensus        69 ~d~VIn~~p~   78 (389)
T COG1748          69 FDLVINAAPP   78 (389)
T ss_pred             CCEEEEeCCc
Confidence            4999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.52  E-value=8e-07  Score=58.54  Aligned_cols=78  Identities=18%  Similarity=0.286  Sum_probs=58.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++++++|.|+ ||.|++++..|...|++ |+++.|+.++.+++.+.+.    +..+.++..+  +   +.+.+.    
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~----~~~~~~~~~~--~---~~~~~~----   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG----GVNIEAIPLE--D---LEEALQ----   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT----GCSEEEEEGG--G---HCHHHH----
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC----ccccceeeHH--H---HHHHHh----
Confidence            688999999998 89999999999999985 9999999888887777772    2344444443  2   223333    


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                         ..|++||+.+...
T Consensus        75 ---~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 ---EADIVINATPSGM   87 (135)
T ss_dssp             ---TESEEEE-SSTTS
T ss_pred             ---hCCeEEEecCCCC
Confidence               6999999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK09620 hypothetical protein; Provisional

Probab=98.51  E-value=3.1e-07  Score=65.67  Aligned_cols=83  Identities=17%  Similarity=0.181  Sum_probs=51.5

Q ss_pred             CCCCEEEEecCC----------------CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           27 ATGLTAIVTGAS----------------SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        27 ~~~~~~litG~~----------------~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      +.||++|||+|.                |.+|.++|++|+++|+.|++++........   .+.   ++.....+..|. 
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~---~~~~~~~V~s~~-   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DIN---NQLELHPFEGII-   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccC---CceeEEEEecHH-
Confidence            478999999886                999999999999999999988764221110   000   012233333322 


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                         ++...+.++... ..+|++||+|++.+
T Consensus        74 ---d~~~~l~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         74 ---DLQDKMKSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             ---HHHHHHHHHhcc-cCCCEEEECccccc
Confidence               222223332211 25899999999864

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.47  E-value=1.5e-06  Score=61.98  Aligned_cols=75  Identities=21%  Similarity=0.241  Sum_probs=58.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      ++|+|++|.+|+.+++.|++.+++|.++.|+..  .+..+.++..  +  +..+..|..|.+++.++++       ++|.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~--g--~~vv~~d~~~~~~l~~al~-------g~d~   67 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQAL--G--AEVVEADYDDPESLVAALK-------GVDA   67 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHT--T--TEEEES-TT-HHHHHHHHT-------TCSE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcc--c--ceEeecccCCHHHHHHHHc-------CCce
Confidence            689999999999999999999999999999873  2334445443  3  3456899999988887777       7899


Q ss_pred             EEEccccC
Q 044688          112 LINNAGIM  119 (147)
Q Consensus       112 lv~~ag~~  119 (147)
                      ++.+.+..
T Consensus        68 v~~~~~~~   75 (233)
T PF05368_consen   68 VFSVTPPS   75 (233)
T ss_dssp             EEEESSCS
T ss_pred             EEeecCcc
Confidence            99887743

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.45  E-value=7.3e-07  Score=68.33  Aligned_cols=76  Identities=26%  Similarity=0.438  Sum_probs=58.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-C-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           32 AIVTGASSGIGAETTRVLALRG-V-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g-~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++|.|+ |.+|+.+++.|++.+ . +|++.+|+.++++++.+.+    .+.++....+|+.|.+++.++++       ..
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~l~~~~~-------~~   68 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL----LGDRVEAVQVDVNDPESLAELLR-------GC   68 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT------TTTTEEEEE--TTTHHHHHHHHT-------TS
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc----cccceeEEEEecCCHHHHHHHHh-------cC
Confidence            689999 999999999999987 4 8999999987766666554    15689999999999999888776       56


Q ss_pred             cEEEEccccC
Q 044688          110 NILINNAGIM  119 (147)
Q Consensus       110 d~lv~~ag~~  119 (147)
                      |++||+++..
T Consensus        69 dvVin~~gp~   78 (386)
T PF03435_consen   69 DVVINCAGPF   78 (386)
T ss_dssp             SEEEE-SSGG
T ss_pred             CEEEECCccc
Confidence            9999999853

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00016 RNA-binding protein; Provisional

Probab=98.44  E-value=6.4e-07  Score=68.44  Aligned_cols=79  Identities=19%  Similarity=0.271  Sum_probs=53.2

Q ss_pred             CCCCEEEEe----cCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH-------HHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           27 ATGLTAIVT----GASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK-------DAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        27 ~~~~~~lit----G~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-------~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      ...+++|||    |++|.||..++++|+++|++|++++|+.+......       .++.    ...+.++.+|+.|   +
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~----~~~v~~v~~D~~d---~  122 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS----SAGVKTVWGDPAD---V  122 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh----hcCceEEEecHHH---H
Confidence            455789999    99999999999999999999999999865422111       1121    1236667777755   2


Q ss_pred             HHHHHHHHhcCCCccEEEEccc
Q 044688           96 RKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      .+++.     ...+|+|||+++
T Consensus       123 ~~~~~-----~~~~d~Vi~~~~  139 (378)
T PLN00016        123 KSKVA-----GAGFDVVYDNNG  139 (378)
T ss_pred             Hhhhc-----cCCccEEEeCCC
Confidence            22221     125777777765

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=98.44  E-value=6.8e-07  Score=65.10  Aligned_cols=102  Identities=15%  Similarity=0.220  Sum_probs=70.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..++++++||||+|.||..++.+|..+|..|++++.-...........   ....++..+.-|+..+     ++.     
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~---~~~~~fel~~hdv~~p-----l~~-----   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW---IGHPNFELIRHDVVEP-----LLK-----   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh---ccCcceeEEEeechhH-----HHH-----
Confidence            467799999999999999999999999999999887433322222222   1135666777787555     333     


Q ss_pred             CCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          106 GLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                        .+|.++|-|+..++ ....++-   .++..|+.++.++.
T Consensus        91 --evD~IyhLAapasp~~y~~npv---ktIktN~igtln~l  126 (350)
T KOG1429|consen   91 --EVDQIYHLAAPASPPHYKYNPV---KTIKTNVIGTLNML  126 (350)
T ss_pred             --HhhhhhhhccCCCCcccccCcc---ceeeecchhhHHHH
Confidence              47888999887653 2344443   36777777766543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.40  E-value=1.5e-06  Score=67.78  Aligned_cols=77  Identities=12%  Similarity=0.181  Sum_probs=57.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|+|+++ +|.++|+.|++.|++|++++++. +...+..+++.+.    .+.++..|..+.            
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~------------   64 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGEL----GIELVLGEYPEE------------   64 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc----CCEEEeCCcchh------------
Confidence            47889999999887 99999999999999999999875 3344444445332    345666777651            


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                      ..+.+|+||+++|+.
T Consensus        65 ~~~~~d~vv~~~g~~   79 (450)
T PRK14106         65 FLEGVDLVVVSPGVP   79 (450)
T ss_pred             HhhcCCEEEECCCCC
Confidence            124699999999974

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.37  E-value=2.9e-06  Score=74.23  Aligned_cols=111  Identities=22%  Similarity=0.250  Sum_probs=69.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC----CEEEEEEccCccch---HHHHHHHhhC-----CCCeeEEEEecCCCHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG----VHVFMAVRNMAAGT---DVKDAIVKEI-----PTAKVDVLELDLSSLASV   95 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~---~~~~~l~~~~-----~~~~~~~~~~D~~~~~~~   95 (147)
                      ..++++|||++|.+|..+++.|++.+    .+|+...|+.....   .+.+.+....     ...++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            45889999999999999999999887    68888888754322   2222111110     013688899999754100


Q ss_pred             --HHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 --RKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 --~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ...++++.   ..+|++||||+...  ...+   +......|+.|+.++++
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~--~~~~---~~~~~~~nv~gt~~ll~ 1094 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVH--WVYP---YSKLRDANVIGTINVLN 1094 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEec--CccC---HHHHHHhHHHHHHHHHH
Confidence              11122221   26999999998653  1222   33345578888877654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.34  E-value=1.7e-06  Score=73.17  Aligned_cols=119  Identities=16%  Similarity=0.174  Sum_probs=95.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccc---hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAG---TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~---~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +..-.|.++|+||-||+|.+++.+|.++|+ .+++++|+.-+.   .......+..  +..+..-..|++..+....+++
T Consensus      1764 ~~hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~--GVqV~vsT~nitt~~ga~~Li~ 1841 (2376)
T KOG1202|consen 1764 YCHPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRR--GVQVQVSTSNITTAEGARGLIE 1841 (2376)
T ss_pred             hcCccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhc--CeEEEEecccchhhhhHHHHHH
Confidence            345679999999999999999999999999 588899975332   2233444444  6678787889999988899888


Q ss_pred             HHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +. .+.+.+-+++|-|.+..+  ..+.+++.|+.+-+..+.|+++|-+
T Consensus      1842 ~s-~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~ 1888 (2376)
T KOG1202|consen 1842 ES-NKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDR 1888 (2376)
T ss_pred             Hh-hhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhh
Confidence            74 457889999999998743  3478999999999999999988754

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.34  E-value=2.7e-06  Score=62.18  Aligned_cols=84  Identities=24%  Similarity=0.276  Sum_probs=67.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +..|-++-|.|++|.+|+.++.+|++.|..|++=+|..+.-..-.+-+-.   =+.+.+...|+.|++++.++++     
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd---LGQvl~~~fd~~DedSIr~vvk-----  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD---LGQVLFMKFDLRDEDSIRAVVK-----  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc---ccceeeeccCCCCHHHHHHHHH-----
Confidence            46778999999999999999999999999999999975532222222212   1589999999999999999888     


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                        .-+++||-.|--
T Consensus       130 --~sNVVINLIGrd  141 (391)
T KOG2865|consen  130 --HSNVVINLIGRD  141 (391)
T ss_pred             --hCcEEEEeeccc
Confidence              468999998853

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.33  E-value=1.8e-06  Score=62.67  Aligned_cols=89  Identities=18%  Similarity=0.148  Sum_probs=57.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      ++|||++|-||.+++.+|.+.|..|+++.|++.+.....        +..+       ...+.+....+      .++|+
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~--------~~~v-------~~~~~~~~~~~------~~~Da   59 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL--------HPNV-------TLWEGLADALT------LGIDA   59 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc--------Cccc-------cccchhhhccc------CCCCE
Confidence            589999999999999999999999999999876433111        1111       11122222111      17999


Q ss_pred             EEEccccCCCCCCCCHHHHHHhhhhhhhhh
Q 044688          112 LINNAGIMASPFMLSKDNIELQFATNHLGS  141 (147)
Q Consensus       112 lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~  141 (147)
                      +||-||..=.....+++.-+..++..+..+
T Consensus        60 vINLAG~~I~~rrWt~~~K~~i~~SRi~~T   89 (297)
T COG1090          60 VINLAGEPIAERRWTEKQKEEIRQSRINTT   89 (297)
T ss_pred             EEECCCCccccccCCHHHHHHHHHHHhHHH
Confidence            999999642222355655555555554444

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.29  E-value=8.6e-06  Score=58.99  Aligned_cols=73  Identities=30%  Similarity=0.333  Sum_probs=60.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      .++|||+||.+|.+++++|.+.|++|.+..|+++......         ..+.....|+.++.++...+.       ++|
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---------~~v~~~~~d~~~~~~l~~a~~-------G~~   65 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---------GGVEVVLGDLRDPKSLVAGAK-------GVD   65 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---------CCcEEEEeccCCHhHHHHHhc-------ccc
Confidence            6899999999999999999999999999999977544333         357778899999998887766       678


Q ss_pred             EEEEccccC
Q 044688          111 ILINNAGIM  119 (147)
Q Consensus       111 ~lv~~ag~~  119 (147)
                      .+++..+..
T Consensus        66 ~~~~i~~~~   74 (275)
T COG0702          66 GVLLISGLL   74 (275)
T ss_pred             EEEEEeccc
Confidence            877777754

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.26  E-value=2.4e-06  Score=61.30  Aligned_cols=88  Identities=17%  Similarity=0.130  Sum_probs=67.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHh---hCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVK---EIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ...|++||||-+|.-|..+++-|++.|+.|..+-|..+.. ..-++.+..   .+.++.....-.|++|..++.++++.+
T Consensus        26 r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i  105 (376)
T KOG1372|consen   26 RPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI  105 (376)
T ss_pred             ccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc
Confidence            3457999999999999999999999999998877754432 222333321   112567888889999999999999988


Q ss_pred             HhcCCCccEEEEccccC
Q 044688          103 TTKGLPLNILINNAGIM  119 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~  119 (147)
                           .++-++|-|+-.
T Consensus       106 -----kPtEiYnLaAQS  117 (376)
T KOG1372|consen  106 -----KPTEVYNLAAQS  117 (376)
T ss_pred             -----Cchhhhhhhhhc
Confidence                 678888887744

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.26  E-value=5.1e-06  Score=62.58  Aligned_cols=73  Identities=19%  Similarity=0.251  Sum_probs=52.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC-C-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR-G-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~-g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.+|+++|||++|.||..++++|+++ | .+++++.|+.+++.++..++.    .       .|+.   ++.+.     
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~----~-------~~i~---~l~~~-----  212 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG----G-------GKIL---SLEEA-----  212 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc----c-------ccHH---hHHHH-----
Confidence            589999999999999999999999864 5 489999998766655554432    1       1221   22222     


Q ss_pred             hcCCCccEEEEccccC
Q 044688          104 TKGLPLNILINNAGIM  119 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~  119 (147)
                        ....|++|++++..
T Consensus       213 --l~~aDiVv~~ts~~  226 (340)
T PRK14982        213 --LPEADIVVWVASMP  226 (340)
T ss_pred             --HccCCEEEECCcCC
Confidence              23689999999864

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.25  E-value=4.9e-06  Score=62.34  Aligned_cols=83  Identities=20%  Similarity=0.222  Sum_probs=69.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHH----CCCEEEEEEccCccchHHHHHHHhhCCC--CeeEEEEecCCCHHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLAL----RGVHVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~----~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      --++|-||+|.-|..+++++++    .+..+.+.+||++++++....+.+..+.  .....+.||.+|++++.++..   
T Consensus         6 yDvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak---   82 (423)
T KOG2733|consen    6 YDVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK---   82 (423)
T ss_pred             eeEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh---
Confidence            3589999999999999999998    6788999999999999988887665421  223388899999999999887   


Q ss_pred             hcCCCccEEEEccccC
Q 044688          104 TKGLPLNILINNAGIM  119 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~  119 (147)
                          +..+|+||+|..
T Consensus        83 ----~~~vivN~vGPy   94 (423)
T KOG2733|consen   83 ----QARVIVNCVGPY   94 (423)
T ss_pred             ----hhEEEEeccccc
Confidence                578999999964

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.07  E-value=2.9e-05  Score=53.86  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=46.4

Q ss_pred             CCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           27 ATGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        27 ~~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      ++||++|||+|                ||-.|.++|+.+...|++|+++..... ..     .     ...+..  .++.
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~-----~-----p~~~~~--i~v~   67 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP-----P-----PPGVKV--IRVE   67 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS---------------TTEEE--EE-S
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc-----c-----cccceE--EEec
Confidence            46788888876                478999999999999999999887632 11     0     123333  3455


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      +.++..+.+.+.   +..-|++|++|++.+
T Consensus        68 sa~em~~~~~~~---~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   68 SAEEMLEAVKEL---LPSADIIIMAAAVSD   94 (185)
T ss_dssp             SHHHHHHHHHHH---GGGGSEEEE-SB--S
T ss_pred             chhhhhhhhccc---cCcceeEEEecchhh
Confidence            555555444444   445699999999864

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.03  E-value=1.9e-05  Score=61.65  Aligned_cols=79  Identities=15%  Similarity=0.200  Sum_probs=53.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++ +|.+.|+.|++.|++|++.+++........+.+...  +.++  ....  +...+   ..     
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~--g~~~--~~~~--~~~~~---~~-----   66 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE--GIKV--ICGS--HPLEL---LD-----   66 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc--CCEE--EeCC--CCHHH---hc-----
Confidence            46789999999986 999999999999999999998754434444445443  3222  2111  11111   11     


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                       ..+|.||+++|+..
T Consensus        67 -~~~d~vV~s~gi~~   80 (447)
T PRK02472         67 -EDFDLMVKNPGIPY   80 (447)
T ss_pred             -CcCCEEEECCCCCC
Confidence             14899999999863

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.99  E-value=4.5e-05  Score=55.89  Aligned_cols=75  Identities=13%  Similarity=0.272  Sum_probs=54.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...   +.......|     ..         ..
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~---~~~~~~~~~-----~~---------~~  176 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY---GEIQAFSMD-----EL---------PL  176 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc---CceEEechh-----hh---------cc
Confidence            46789999998 69999999999999999999999987777776666432   122222111     10         12


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                      ...|+|||+.+..
T Consensus       177 ~~~DivInatp~g  189 (270)
T TIGR00507       177 HRVDLIINATSAG  189 (270)
T ss_pred             cCccEEEECCCCC
Confidence            3689999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.96  E-value=5.1e-05  Score=50.69  Aligned_cols=76  Identities=14%  Similarity=0.268  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++++++|+|+ |++|..+++.|.+.| .+|++++|+.++.+++.+++...  .     +..+..+.++.         
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~---------   78 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL--G-----IAIAYLDLEEL---------   78 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc--c-----cceeecchhhc---------
Confidence            366789999998 899999999999986 78999999877666666555321  0     12233333222         


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                       ....|++|+++...
T Consensus        79 -~~~~Dvvi~~~~~~   92 (155)
T cd01065          79 -LAEADLIINTTPVG   92 (155)
T ss_pred             -cccCCEEEeCcCCC
Confidence             23689999998754

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.95  E-value=0.00012  Score=55.34  Aligned_cols=82  Identities=15%  Similarity=0.309  Sum_probs=59.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---------------------ccchHHHHHHHhhCCCCeeE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---------------------AAGTDVKDAIVKEIPTAKVD   83 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   83 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++.+++++.                     .+.+.+.+.+++.+|..++.
T Consensus        21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~   99 (338)
T PRK12475         21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV   99 (338)
T ss_pred             hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence            478899999997 7899999999999997 899998863                     23455567777777777888


Q ss_pred             EEEecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           84 VLELDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        84 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      .+..|++. +.+.++++       ..|++|.+.
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~  124 (338)
T PRK12475        100 PVVTDVTV-EELEELVK-------EVDLIIDAT  124 (338)
T ss_pred             EEeccCCH-HHHHHHhc-------CCCEEEEcC
Confidence            87777753 23443332       456666654

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.91  E-value=8.1e-05  Score=56.02  Aligned_cols=34  Identities=21%  Similarity=0.194  Sum_probs=29.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC-------CEEEEEEccC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG-------VHVFMAVRNM   63 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g-------~~v~~~~r~~   63 (147)
                      -+++|||++|.+|..++..|+..+       .+|++.++++
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~   43 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP   43 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence            468999999999999999999854       4899999964

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=97.89  E-value=9.8e-05  Score=50.83  Aligned_cols=72  Identities=24%  Similarity=0.234  Sum_probs=58.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++-|.|++|-.|..++++..++|..|+.+.|+++++...          ..+...+.|+-|++++.+.+.       +.|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~----------~~~~i~q~Difd~~~~a~~l~-------g~D   64 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR----------QGVTILQKDIFDLTSLASDLA-------GHD   64 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc----------ccceeecccccChhhhHhhhc-------CCc
Confidence            567999999999999999999999999999997764422          245677889999888766555       789


Q ss_pred             EEEEccccC
Q 044688          111 ILINNAGIM  119 (147)
Q Consensus       111 ~lv~~ag~~  119 (147)
                      .||..-|..
T Consensus        65 aVIsA~~~~   73 (211)
T COG2910          65 AVISAFGAG   73 (211)
T ss_pred             eEEEeccCC
Confidence            999887765

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.88  E-value=0.00017  Score=50.67  Aligned_cols=83  Identities=12%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc-------------------CccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN-------------------MAAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|. ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~   96 (202)
T TIGR02356        18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL   96 (202)
T ss_pred             HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            478899999985 7999999999999997 89998876                   23344556677777666666666


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...+.+ +.+.++++       ..|++|.+..
T Consensus        97 ~~~i~~-~~~~~~~~-------~~D~Vi~~~d  120 (202)
T TIGR02356        97 KERVTA-ENLELLIN-------NVDLVLDCTD  120 (202)
T ss_pred             hhcCCH-HHHHHHHh-------CCCEEEECCC
Confidence            655543 23333322       5777777653

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.80  E-value=0.00023  Score=57.13  Aligned_cols=80  Identities=20%  Similarity=0.170  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~-~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      .....+++||||++ +.||.+++.+|+..|+.|+++..+. +...+..+.|...+  ++.....+..+..+..+++++++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            45788999999998 7999999999999999999876543 44556666665543  25678889999999999999998


Q ss_pred             HHHh
Q 044688          101 DFTT  104 (147)
Q Consensus       101 ~~~~  104 (147)
                      -+..
T Consensus       472 wIg~  475 (866)
T COG4982         472 WIGD  475 (866)
T ss_pred             Hhcc
Confidence            8743

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.78  E-value=0.00031  Score=53.93  Aligned_cols=83  Identities=16%  Similarity=0.291  Sum_probs=58.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc-------------------CccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN-------------------MAAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++++                   ..+.+.+.+.+++.+|..++..+
T Consensus       132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  210 (376)
T PRK08762        132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAV  210 (376)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            367888999966 7899999999999997 79999886                   34566667778777766666665


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...+++ +.+..+++       ..|+||++..
T Consensus       211 ~~~~~~-~~~~~~~~-------~~D~Vv~~~d  234 (376)
T PRK08762        211 QERVTS-DNVEALLQ-------DVDVVVDGAD  234 (376)
T ss_pred             eccCCh-HHHHHHHh-------CCCEEEECCC
Confidence            555443 23333332       4677777654

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.75  E-value=0.00043  Score=49.49  Aligned_cols=83  Identities=13%  Similarity=0.285  Sum_probs=58.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc-------------------CccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN-------------------MAAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus        18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~   96 (228)
T cd00757          18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY   96 (228)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence            467889999985 7899999999999997 77777432                   22345566777777777777777


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ..+++ .+.+.++++       ..|++|.+..
T Consensus        97 ~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          97 NERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             cceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            76664 233433333       4777777754

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.75  E-value=0.00013  Score=54.81  Aligned_cols=100  Identities=15%  Similarity=0.072  Sum_probs=61.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++.+++.|+|++|.+|..++..|+..+  .++++++++  .......++....  ..  ....+.+|+.++.+.++    
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~--~~--~~v~~~td~~~~~~~l~----   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHID--TP--AKVTGYADGELWEKALR----   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcC--cC--ceEEEecCCCchHHHhC----
Confidence            455689999999999999999999665  589999983  2222223443321  12  22345555444333333    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhh
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLH  143 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~  143 (147)
                         ..|++|+++|..... ..   .+...+..|+.....
T Consensus        76 ---gaDvVVitaG~~~~~-~~---tR~dll~~N~~i~~~  107 (321)
T PTZ00325         76 ---GADLVLICAGVPRKP-GM---TRDDLFNTNAPIVRD  107 (321)
T ss_pred             ---CCCEEEECCCCCCCC-CC---CHHHHHHHHHHHHHH
Confidence               799999999975321 12   234456666655443

>PRK06849 hypothetical protein; Provisional

Probab=97.75  E-value=0.00045  Score=53.11  Aligned_cols=83  Identities=16%  Similarity=0.121  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +.+++||||++..+|..+++.|.+.|.+|++++.++..........      .....+...-.+.+...+.+.++.++. 
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~------d~~~~~p~p~~d~~~~~~~L~~i~~~~-   75 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV------DGFYTIPSPRWDPDAYIQALLSIVQRE-   75 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh------hheEEeCCCCCCHHHHHHHHHHHHHHc-
Confidence            4689999999999999999999999999999988754332111111      122222222234443433344444443 


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+||-...
T Consensus        76 ~id~vIP~~e   85 (389)
T PRK06849         76 NIDLLIPTCE   85 (389)
T ss_pred             CCCEEEECCh
Confidence            4899987765

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.74  E-value=0.00019  Score=53.00  Aligned_cols=51  Identities=24%  Similarity=0.276  Sum_probs=43.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhC
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEI   77 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~   77 (147)
                      .+.+++++|.|+ ||.|++++..|++.|. +|++++|+.++.+.+.+.+...+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~  175 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARF  175 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhC
Confidence            467789999998 7799999999999997 89999999888888888776543

>PLN00106 malate dehydrogenase

Probab=97.74  E-value=8.8e-05  Score=55.74  Aligned_cols=100  Identities=15%  Similarity=0.140  Sum_probs=61.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++++.|||++|.+|..++..|+..+.  .++++++++  .+-...++....  ...  ...++++.+++...++     
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~--~~~--~i~~~~~~~d~~~~l~-----   85 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHIN--TPA--QVRGFLGDDQLGDALK-----   85 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCC--cCc--eEEEEeCCCCHHHHcC-----
Confidence            447899999999999999999997764  799999976  222122343221  111  1224333333333333     


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhh
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l  144 (147)
                        ..|++|+.||..... ..   .++..+..|+.....+
T Consensus        86 --~aDiVVitAG~~~~~-g~---~R~dll~~N~~i~~~i  118 (323)
T PLN00106         86 --GADLVIIPAGVPRKP-GM---TRDDLFNINAGIVKTL  118 (323)
T ss_pred             --CCCEEEEeCCCCCCC-CC---CHHHHHHHHHHHHHHH
Confidence              799999999975321 22   3455666776554443

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.73  E-value=0.00047  Score=52.24  Aligned_cols=82  Identities=15%  Similarity=0.340  Sum_probs=57.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---------------------ccchHHHHHHHhhCCCCeeE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---------------------AAGTDVKDAIVKEIPTAKVD   83 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~   83 (147)
                      .+..++++|.|+ ||+|..+++.|+..|. ++.+++.+.                     .+.+.+.+.+++.+|..++.
T Consensus        21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~   99 (339)
T PRK07688         21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE   99 (339)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence            477889999998 7999999999999998 899998863                     23344456677666666777


Q ss_pred             EEEecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           84 VLELDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        84 ~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      .+..+++. +.+..+++       ..|++|.+.
T Consensus       100 ~~~~~~~~-~~~~~~~~-------~~DlVid~~  124 (339)
T PRK07688        100 AIVQDVTA-EELEELVT-------GVDLIIDAT  124 (339)
T ss_pred             EEeccCCH-HHHHHHHc-------CCCEEEEcC
Confidence            77777653 23333332       356666554

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.71  E-value=0.00092  Score=43.81  Aligned_cols=80  Identities=18%  Similarity=0.379  Sum_probs=59.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEec
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLELD   88 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D   88 (147)
                      .++++|.|+ |++|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467888887 7899999999999997 788886531                   2334466778888888899999988


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           89 LSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 3344555553       6799998865

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.70  E-value=0.00036  Score=51.55  Aligned_cols=81  Identities=17%  Similarity=0.240  Sum_probs=55.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ...+|+++|.|+ ||.+++++..|++.|+ +++++.|+.++.+++.+.+...++...+.  ..+   ........     
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~--~~~---~~~~~~~~-----  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVD---ARGIEDVI-----  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEE--ecC---HhHHHHHH-----
Confidence            356899999998 8899999999999997 79999999888888777765433211111  122   21222111     


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                        ...|+|||+.-+.
T Consensus       193 --~~~divINaTp~G  205 (283)
T PRK14027        193 --AAADGVVNATPMG  205 (283)
T ss_pred             --hhcCEEEEcCCCC
Confidence              2489999997543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.69  E-value=0.00018  Score=51.20  Aligned_cols=80  Identities=20%  Similarity=0.248  Sum_probs=57.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC---EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV---HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++|||++|-+|++|.+.+.++|.   +.++.+.                       -.+|+++..+.+++|+..    
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s-----------------------kd~DLt~~a~t~~lF~~e----   54 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS-----------------------KDADLTNLADTRALFESE----   54 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc-----------------------ccccccchHHHHHHHhcc----
Confidence            6899999999999999999999875   2333221                       147999999999999976    


Q ss_pred             CCccEEEEccccCCC---CCCCCHHHHHHhhhhh
Q 044688          107 LPLNILINNAGIMAS---PFMLSKDNIELQFATN  137 (147)
Q Consensus       107 ~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N  137 (147)
                       .+-.+||.|+..+.   ....+.+.++..+.+|
T Consensus        55 -kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~in   87 (315)
T KOG1431|consen   55 -KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQIN   87 (315)
T ss_pred             -CCceeeehHhhhcchhhcCCCchHHHhhcceec
Confidence             67788888875542   2234455555554443

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.66  E-value=0.00024  Score=55.16  Aligned_cols=75  Identities=15%  Similarity=0.258  Sum_probs=53.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.+++++|.|+ |++|..+++.|...|. +++++.|+.++.+.+...+.    ...       +...++....      
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~----~~~-------~~~~~~l~~~------  239 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR----NAS-------AHYLSELPQL------  239 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc----CCe-------EecHHHHHHH------
Confidence            578999999999 8999999999999996 79999999776655555431    111       1112233222      


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                       ....|+||++.+..
T Consensus       240 -l~~aDiVI~aT~a~  253 (414)
T PRK13940        240 -IKKADIIIAAVNVL  253 (414)
T ss_pred             -hccCCEEEECcCCC
Confidence             23689999999864

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.64  E-value=0.00082  Score=51.25  Aligned_cols=83  Identities=19%  Similarity=0.257  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~  103 (355)
T PRK05597         25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS  103 (355)
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence            478899999988 7999999999999997 788887643                   3445567778888887788777


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++.. ....+++       ..|+||.+..
T Consensus       104 ~~~i~~~-~~~~~~~-------~~DvVvd~~d  127 (355)
T PRK05597        104 VRRLTWS-NALDELR-------DADVILDGSD  127 (355)
T ss_pred             EeecCHH-HHHHHHh-------CCCEEEECCC
Confidence            7776543 3333333       5777777754

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.64  E-value=0.00079  Score=47.69  Aligned_cols=65  Identities=15%  Similarity=0.273  Sum_probs=47.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++.+.                  .+.+.+.+.+.+.+|..++..+.
T Consensus        25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~  103 (212)
T PRK08644         25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN  103 (212)
T ss_pred             HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            367889999996 8999999999999997 688888761                  23444556666766666666666


Q ss_pred             ecCCC
Q 044688           87 LDLSS   91 (147)
Q Consensus        87 ~D~~~   91 (147)
                      ..+++
T Consensus       104 ~~i~~  108 (212)
T PRK08644        104 EKIDE  108 (212)
T ss_pred             eecCH
Confidence            55543

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=97.63  E-value=0.00037  Score=51.67  Aligned_cols=113  Identities=18%  Similarity=0.135  Sum_probs=78.1

Q ss_pred             CCEEEEecC-CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGA-SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ..+|||.|. +.-+++.+|.-|-++|+-|+++..+.+.......    +. ..++.....|..++.++...+.+......
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~----e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~   77 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVES----ED-RPDIRPLWLDDSDPSSIHASLSRFASLLS   77 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHh----cc-CCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence            468899996 6899999999999999999999987553222222    21 24577777888776666666666544332


Q ss_pred             --------------CccEEEEccccC---CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 --------------PLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 --------------~id~lv~~ag~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                                    .+..||..-...   ++...++.+.|...++.|+.-++..+|
T Consensus        78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q  133 (299)
T PF08643_consen   78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQ  133 (299)
T ss_pred             CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHH
Confidence                          233444332222   355678999999999999998886544

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.61  E-value=0.00029  Score=52.05  Aligned_cols=79  Identities=19%  Similarity=0.188  Sum_probs=54.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.+++++|.|+ ||.+++++..|++.|+ +|+++.|+.++.+++.+.+...   ..+.  .  +...+++..       .
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~---~~~~--~--~~~~~~~~~-------~  187 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV---GVIT--R--LEGDSGGLA-------I  187 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc---Ccce--e--ccchhhhhh-------c
Confidence            57899999987 8999999999999997 7999999988777777665322   1111  1  111111211       1


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                      ....|+|||+.....
T Consensus       188 ~~~~DiVInaTp~g~  202 (282)
T TIGR01809       188 EKAAEVLVSTVPADV  202 (282)
T ss_pred             ccCCCEEEECCCCCC
Confidence            236899999987643

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.59  E-value=0.0002  Score=53.47  Aligned_cols=77  Identities=22%  Similarity=0.297  Sum_probs=61.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ...++|-|++|-.|.-++++|+++|....+.+||..++..+...|     +.+.-..++.+  +..+.++.+       +
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L-----G~~~~~~p~~~--p~~~~~~~~-------~   71 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL-----GPEAAVFPLGV--PAALEAMAS-------R   71 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc-----CccccccCCCC--HHHHHHHHh-------c
Confidence            467899999999999999999999999899999988888887777     44444444444  555555555       7


Q ss_pred             ccEEEEccccC
Q 044688          109 LNILINNAGIM  119 (147)
Q Consensus       109 id~lv~~ag~~  119 (147)
                      .++|+||+|..
T Consensus        72 ~~VVlncvGPy   82 (382)
T COG3268          72 TQVVLNCVGPY   82 (382)
T ss_pred             ceEEEeccccc
Confidence            89999999964

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.59  E-value=0.0011  Score=50.89  Aligned_cols=77  Identities=12%  Similarity=0.136  Sum_probs=53.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +.++.++|.|+ |.+|...++.+...|++|++++++.++.+.+...+     +..   +..+..+.+.+.+.+.      
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----g~~---v~~~~~~~~~l~~~l~------  229 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----GGR---IHTRYSNAYEIEDAVK------  229 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----Cce---eEeccCCHHHHHHHHc------
Confidence            46678999988 78999999999999999999999866544433322     222   2234455555544432      


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ..|++|+++++.
T Consensus       230 -~aDvVI~a~~~~  241 (370)
T TIGR00518       230 -RADLLIGAVLIP  241 (370)
T ss_pred             -cCCEEEEccccC
Confidence             589999998664

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.58  E-value=0.00015  Score=53.33  Aligned_cols=48  Identities=17%  Similarity=0.244  Sum_probs=41.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIV   74 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~   74 (147)
                      .+.+++++|+|+ ||+|++++..|...| .+|++++|+.++.+++.+.+.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 699999999877776666553

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.57  E-value=0.00073  Score=50.10  Aligned_cols=80  Identities=20%  Similarity=0.261  Sum_probs=55.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|+++++|.+++..+...|++|++++++.++.+.+    ...  +...   ..|..+.+....+.+...  ..
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~--~~~~---~~~~~~~~~~~~~~~~~~--~~  234 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KEL--GADY---VIDYRKEDFVREVRELTG--KR  234 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc--CCCe---EEecCChHHHHHHHHHhC--CC
Confidence            578999999999999999999999999999998876543322    221  2221   235555555555444332  23


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++++++|.
T Consensus       235 ~~d~~i~~~g~  245 (342)
T cd08266         235 GVDVVVEHVGA  245 (342)
T ss_pred             CCcEEEECCcH
Confidence            69999999874

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.57  E-value=0.00013  Score=58.38  Aligned_cols=47  Identities=26%  Similarity=0.372  Sum_probs=40.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      .+.+|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            477899999999 69999999999999999999999876666655544

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.56  E-value=0.0013  Score=47.61  Aligned_cols=82  Identities=13%  Similarity=0.299  Sum_probs=56.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+++++++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~  107 (245)
T PRK05690         29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI  107 (245)
T ss_pred             HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            478899999998 8999999999999996 788876532                   2334455667777777777776


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      ...++. +.+..+++       ..|++|.+.
T Consensus       108 ~~~i~~-~~~~~~~~-------~~DiVi~~~  130 (245)
T PRK05690        108 NARLDD-DELAALIA-------GHDLVLDCT  130 (245)
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEecC
Confidence            665543 22333322       466666665

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.52  E-value=0.00062  Score=51.11  Aligned_cols=80  Identities=16%  Similarity=0.217  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+++++|..+++.+...|++|+.+.++.++.+.+.+.+     +....   .|-.+.++..+.+.+...  +
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l-----Ga~~v---i~~~~~~~~~~~i~~~~~--~  220 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL-----GFDDA---FNYKEEPDLDAALKRYFP--N  220 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc-----CCcee---EEcCCcccHHHHHHHhCC--C
Confidence            5789999999999999999888888999998888765544333223     32211   122222223222333221  3


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.+.|
T Consensus       221 gvd~v~d~~g  230 (338)
T cd08295         221 GIDIYFDNVG  230 (338)
T ss_pred             CcEEEEECCC
Confidence            6888888765

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.50  E-value=0.00044  Score=51.01  Aligned_cols=78  Identities=23%  Similarity=0.319  Sum_probs=56.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++.++|.|+ ||.+++++..|++.|+ +++++.|+.++.+++.+.+.+..  ..+.  ..+..+.+...        
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~--~~~~--~~~~~~~~~~~--------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELG--AAVE--AAALADLEGLE--------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc--cccc--ccccccccccc--------
Confidence            456899999998 7899999999999995 89999999998888888776542  1111  11222221111        


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                         ..|+|||+..+.
T Consensus       190 ---~~dliINaTp~G  201 (283)
T COG0169         190 ---EADLLINATPVG  201 (283)
T ss_pred             ---ccCEEEECCCCC
Confidence               489999998654

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.50  E-value=0.0007  Score=49.74  Aligned_cols=80  Identities=15%  Similarity=0.240  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|+++++|.++++.+...|.+|++++++.++.+.+    .+.  +.+.   .+|..+.+...++.+..  ...
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~--g~~~---~~~~~~~~~~~~~~~~~--~~~  212 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQA--GADA---VFNYRAEDLADRILAAT--AGQ  212 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHc--CCCE---EEeCCCcCHHHHHHHHc--CCC
Confidence            579999999999999999999999999999998876543333    221  2221   13444444444433222  223


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      .+|.+++++|.
T Consensus       213 ~~d~vi~~~~~  223 (325)
T cd08253         213 GVDVIIEVLAN  223 (325)
T ss_pred             ceEEEEECCch
Confidence            69999998764

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.49  E-value=0.0006  Score=51.15  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=49.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+++|+|+++++|...++.....|+ +|+.+.+++++.+.+.+++     +....   .|..+. ++.+.+.+...  ++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l-----Ga~~v---i~~~~~-~~~~~i~~~~~--~g  224 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL-----GFDAA---INYKTD-NVAERLRELCP--EG  224 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc-----CCcEE---EECCCC-CHHHHHHHHCC--CC
Confidence            7999999999999999887778898 7999888765544433333     33221   122222 22223333321  46


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      +|++++++|
T Consensus       225 vd~vid~~g  233 (345)
T cd08293         225 VDVYFDNVG  233 (345)
T ss_pred             ceEEEECCC
Confidence            899988866

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.49  E-value=9e-05  Score=52.01  Aligned_cols=48  Identities=21%  Similarity=0.187  Sum_probs=40.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      ..++.||+++|+|.+ .+|..+++.|.+.|++|++++++++..+++.+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            456899999999995 899999999999999999999886655554443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=97.48  E-value=0.0015  Score=44.87  Aligned_cols=76  Identities=16%  Similarity=0.330  Sum_probs=51.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccC------------------ccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNM------------------AAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ++|.|+ ||+|..+++.|++.|. ++++++.+.                  .+.+.+.+.+.+.+|..++..+...++. 
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~-   79 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE-   79 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh-
Confidence            677775 8999999999999998 699988764                  2334455666677666677666655543 


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      +...++++       ..|++|.+.
T Consensus        80 ~~~~~~l~-------~~DlVi~~~   96 (174)
T cd01487          80 NNLEGLFG-------DCDIVVEAF   96 (174)
T ss_pred             hhHHHHhc-------CCCEEEECC
Confidence            22333322       567777663

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.45  E-value=0.00089  Score=49.68  Aligned_cols=38  Identities=29%  Similarity=0.456  Sum_probs=33.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+.+++|+|+++++|.++++.+...|++|+.+.++++.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~  199 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK  199 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            46799999999999999999999999999998877544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.44  E-value=0.00089  Score=50.71  Aligned_cols=80  Identities=15%  Similarity=0.195  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|++|++|...+..+...|++|+.+.++.++.+.+..++     +.+..+   |-.+.+++.+.+.+..  .+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l-----Ga~~vi---~~~~~~~~~~~i~~~~--~~  227 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL-----GFDEAF---NYKEEPDLDAALKRYF--PE  227 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc-----CCCEEE---ECCCcccHHHHHHHHC--CC
Confidence            5789999999999999998888888999988887655433332222     332211   2222112333333322  13


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.++|
T Consensus       228 gvD~v~d~vG  237 (348)
T PLN03154        228 GIDIYFDNVG  237 (348)
T ss_pred             CcEEEEECCC
Confidence            6888888776

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.44  E-value=0.00073  Score=49.24  Aligned_cols=74  Identities=12%  Similarity=0.214  Sum_probs=53.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      .++|+|||+- |+.++++|.+.|++|+.+.++....+.+..        .....+..+.-+.+++.+++.+.     ++|
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~--------~g~~~v~~g~l~~~~l~~~l~~~-----~i~   67 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI--------HQALTVHTGALDPQELREFLKRH-----SID   67 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc--------cCCceEEECCCCHHHHHHHHHhc-----CCC
Confidence            6899999997 999999999999999999988654332221        11223445556677777776653     799


Q ss_pred             EEEEcccc
Q 044688          111 ILINNAGI  118 (147)
Q Consensus       111 ~lv~~ag~  118 (147)
                      .||+.+..
T Consensus        68 ~VIDAtHP   75 (256)
T TIGR00715        68 ILVDATHP   75 (256)
T ss_pred             EEEEcCCH
Confidence            99988753

This enzyme was found to be a monomer by gel filtration.

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=97.43  E-value=0.002  Score=49.41  Aligned_cols=83  Identities=16%  Similarity=0.304  Sum_probs=56.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~  116 (370)
T PRK05600         38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL  116 (370)
T ss_pred             HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence            367889999987 6899999999999996 888887651                   2344456667777776677776


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++. +....+++       ..|+||.|..
T Consensus       117 ~~~i~~-~~~~~~~~-------~~DlVid~~D  140 (370)
T PRK05600        117 RERLTA-ENAVELLN-------GVDLVLDGSD  140 (370)
T ss_pred             eeecCH-HHHHHHHh-------CCCEEEECCC
Confidence            666642 23333332       4666666543

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=97.43  E-value=0.00016  Score=53.01  Aligned_cols=107  Identities=13%  Similarity=0.071  Sum_probs=69.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALR--GVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.++|||++|.||...+..+...  .++.+..+. .--+.....++.+.   ..+..++..|+.+...+..++..    
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n---~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRN---SPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhcc---CCCceEeeccccchHHHHhhhcc----
Confidence            389999999999999999999976  344443332 11111222222222   46899999999999888877664    


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                       ..+|.|+|-|+...  .+.+.-+--.....|+.|+..|.
T Consensus        79 -~~id~vihfaa~t~--vd~s~~~~~~~~~nnil~t~~Ll  115 (331)
T KOG0747|consen   79 -EEIDTVIHFAAQTH--VDRSFGDSFEFTKNNILSTHVLL  115 (331)
T ss_pred             -CchhhhhhhHhhhh--hhhhcCchHHHhcCCchhhhhHH
Confidence             38999999998653  22222222345566777666554

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.43  E-value=0.0013  Score=51.94  Aligned_cols=78  Identities=18%  Similarity=0.168  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           26 DATGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ++.||++|||+|                ||-.|.++|+.+...|++|+++.-... ..         . ...+..+.  +
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~---------~-p~~v~~i~--V  319 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA---------D-PQGVKVIH--V  319 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC---------C-CCCceEEE--e
Confidence            489999999987                467899999999999999998874321 10         1 12233333  3


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           90 SSLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      .+.   .++.+.+.+.+. .|++|++|++.+
T Consensus       320 ~ta---~eM~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        320 ESA---RQMLAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             cCH---HHHHHHHHhhCC-CCEEEEeccccc
Confidence            333   444444444444 699999999863

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.43  E-value=0.0013  Score=48.11  Aligned_cols=80  Identities=18%  Similarity=0.300  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|+++++|..++..+...|++|++++++.++.+.+ .++     +...   ..+..+.+....+.. ... ..
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~-~~~-~~  207 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL-----GADV---AINYRTEDFAEEVKE-ATG-GR  207 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc-----CCCE---EEeCCchhHHHHHHH-HhC-CC
Confidence            578999999999999999999999999999988875543332 222     2221   233333333333322 222 24


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|.+++++|.
T Consensus       208 ~~d~vi~~~g~  218 (323)
T cd05276         208 GVDVILDMVGG  218 (323)
T ss_pred             CeEEEEECCch
Confidence            68999998763

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.41  E-value=0.00065  Score=53.77  Aligned_cols=45  Identities=18%  Similarity=0.257  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      .+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~  373 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS  373 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            467899999996 799999999999999999999988665554443

>PRK08328 hypothetical protein; Provisional

Probab=97.41  E-value=0.0026  Score=45.62  Aligned_cols=83  Identities=14%  Similarity=0.224  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCc--------------------cchHHHHHHHhhCCCCeeEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMA--------------------AGTDVKDAIVKEIPTAKVDV   84 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~--------------------~~~~~~~~l~~~~~~~~~~~   84 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++.+.-                    +.+.+.+.+.+.+|..++..
T Consensus        24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~  102 (231)
T PRK08328         24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET  102 (231)
T ss_pred             HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence            367888999987 6899999999999997 7888875421                    11112334555556666666


Q ss_pred             EEecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           85 LELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        85 ~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      +...++ .+.+.++++       ..|++|.+..
T Consensus       103 ~~~~~~-~~~~~~~l~-------~~D~Vid~~d  127 (231)
T PRK08328        103 FVGRLS-EENIDEVLK-------GVDVIVDCLD  127 (231)
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            555553 333433332       4677776653

>PRK08223 hypothetical protein; Validated

Probab=97.41  E-value=0.0017  Score=48.06  Aligned_cols=82  Identities=11%  Similarity=0.211  Sum_probs=56.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~  102 (287)
T PRK08223         24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF  102 (287)
T ss_pred             HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence            478889999987 6899999999999996 788876542                   2334456677777777777777


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      ...++.. ...++++       ..|+||.+.
T Consensus       103 ~~~l~~~-n~~~ll~-------~~DlVvD~~  125 (287)
T PRK08223        103 PEGIGKE-NADAFLD-------GVDVYVDGL  125 (287)
T ss_pred             ecccCcc-CHHHHHh-------CCCEEEECC
Confidence            7666543 2333333       467666443

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.39  E-value=0.0028  Score=45.80  Aligned_cols=83  Identities=17%  Similarity=0.320  Sum_probs=55.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~   99 (240)
T TIGR02355        21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI   99 (240)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence            477888999987 6899999999999996 788876642                   2234455677777777676666


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++. +.+.++++       ..|++|.+..
T Consensus       100 ~~~i~~-~~~~~~~~-------~~DlVvd~~D  123 (240)
T TIGR02355       100 NAKLDD-AELAALIA-------EHDIVVDCTD  123 (240)
T ss_pred             eccCCH-HHHHHHhh-------cCCEEEEcCC
Confidence            554433 23333332       4566665543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.39  E-value=0.00098  Score=49.72  Aligned_cols=79  Identities=16%  Similarity=0.232  Sum_probs=50.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+++++|...++.....|++|+.+.++.++.+.+ .++     +.+..+   |-.+.+.+.+.+....  .+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~l-----Ga~~vi---~~~~~~~~~~~~~~~~--~~  206 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKL-----GFDVAF---NYKTVKSLEETLKKAS--PD  206 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCCEEE---eccccccHHHHHHHhC--CC
Confidence            578999999999999999888778899999888775543333 222     332211   2222223333333332  13


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.+.|
T Consensus       207 gvdvv~d~~G  216 (325)
T TIGR02825       207 GYDCYFDNVG  216 (325)
T ss_pred             CeEEEEECCC
Confidence            6888888876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd00704 MDH Malate dehydrogenase

Probab=97.36  E-value=0.0012  Score=49.68  Aligned_cols=33  Identities=18%  Similarity=0.190  Sum_probs=28.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~   63 (147)
                      ++.|||++|.+|..++..|+..+.       .+++.++++
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~   41 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP   41 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence            578999999999999999998662       499999876

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.35  E-value=0.0032  Score=47.04  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=52.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++.|.|+ |++|..++..|+..|  .++++++++++..+....++.....  ....... .  .+.+.+          
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~l----------   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSDC----------   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHHh----------
Confidence            35788886 899999999999998  4899999998877777777654321  1111111 1  222211          


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                       ...|++|+++|...
T Consensus        67 -~~aDIVIitag~~~   80 (306)
T cd05291          67 -KDADIVVITAGAPQ   80 (306)
T ss_pred             -CCCCEEEEccCCCC
Confidence             36999999999753

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.34  E-value=0.0031  Score=41.66  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=55.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      +++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            3678886 8999999999999997 788886541                   234445667777777777777777765


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      +... ...       +...|++|.+..
T Consensus        80 ~~~~-~~~-------~~~~diVi~~~d   98 (143)
T cd01483          80 EDNL-DDF-------LDGVDLVIDAID   98 (143)
T ss_pred             hhhH-HHH-------hcCCCEEEECCC
Confidence            4432 122       237899998875

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=97.34  E-value=0.0016  Score=50.24  Aligned_cols=47  Identities=26%  Similarity=0.360  Sum_probs=41.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      ...+...++|+|++|++|+-+++.|.++|+.|.++.|+.++.++...
T Consensus        75 ~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~  121 (411)
T KOG1203|consen   75 NSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG  121 (411)
T ss_pred             CCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc
Confidence            34677899999999999999999999999999999999877666655

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.34  E-value=0.0017  Score=48.20  Aligned_cols=48  Identities=19%  Similarity=0.250  Sum_probs=38.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCc---cchHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMA---AGTDVKDAIV   74 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~   74 (147)
                      .+++|+++|.|+ ||-+++++..|+..|. +|+++.|+.+   +.+++.+.+.
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            468899999997 5669999999999996 8999999854   5555555553

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.34  E-value=0.0011  Score=47.35  Aligned_cols=74  Identities=16%  Similarity=0.192  Sum_probs=53.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      .++|.|+ |-+|..+|+.|.+.|++|++++++++...+...+      ......+.+|.++++.+.++-      ....|
T Consensus         2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~------~~~~~~v~gd~t~~~~L~~ag------i~~aD   68 (225)
T COG0569           2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD------ELDTHVVIGDATDEDVLEEAG------IDDAD   68 (225)
T ss_pred             EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh------hcceEEEEecCCCHHHHHhcC------CCcCC
Confidence            4566665 6799999999999999999999997765543221      135667888998888766541      12567


Q ss_pred             EEEEccc
Q 044688          111 ILINNAG  117 (147)
Q Consensus       111 ~lv~~ag  117 (147)
                      .+|...|
T Consensus        69 ~vva~t~   75 (225)
T COG0569          69 AVVAATG   75 (225)
T ss_pred             EEEEeeC
Confidence            7776665

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.31  E-value=0.0022  Score=42.48  Aligned_cols=77  Identities=13%  Similarity=0.192  Sum_probs=52.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++.|+|++|.+|..++..|...+.  ++++++++++..+-...++..... ...-..+..  .+.+.+           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence            578999999999999999999874  799999997665555555543211 111122222  233322           2


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      ..|++|..+|...
T Consensus        69 ~aDivvitag~~~   81 (141)
T PF00056_consen   69 DADIVVITAGVPR   81 (141)
T ss_dssp             TESEEEETTSTSS
T ss_pred             cccEEEEeccccc
Confidence            6899999999753

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.31  E-value=0.003  Score=44.38  Aligned_cols=36  Identities=19%  Similarity=0.343  Sum_probs=32.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN   62 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~   62 (147)
                      .+..++++|.|+ ||+|..++..|++.|. ++++++++
T Consensus        18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            367889999998 7899999999999998 79998876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.29  E-value=0.0026  Score=49.22  Aligned_cols=47  Identities=19%  Similarity=0.353  Sum_probs=41.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l   73 (147)
                      ++.++++||.|+ |-+|.-+++.|.++| .+|+++.|+.++..++...+
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~  222 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL  222 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh
Confidence            389999999998 569999999999999 48999999988888877776

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.29  E-value=0.0044  Score=43.42  Aligned_cols=82  Identities=17%  Similarity=0.343  Sum_probs=56.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---------------------ccchHHHHHHHhhCCCCeeEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---------------------AAGTDVKDAIVKEIPTAKVDV   84 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~   84 (147)
                      +++.+++|.|++ |+|..+++.|+..|. ++++++.+.                     .+.+.+.+.+++.+|..++..
T Consensus        17 L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~   95 (198)
T cd01485          17 LRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSI   95 (198)
T ss_pred             HhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEE
Confidence            677889999875 499999999999997 688887541                     122334566777777777777


Q ss_pred             EEecCCC-HHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           85 LELDLSS-LASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        85 ~~~D~~~-~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      +..++.+ .+....++.       ..|++|.+.
T Consensus        96 ~~~~~~~~~~~~~~~~~-------~~dvVi~~~  121 (198)
T cd01485          96 VEEDSLSNDSNIEEYLQ-------KFTLVIATE  121 (198)
T ss_pred             EecccccchhhHHHHHh-------CCCEEEECC
Confidence            7666643 223333332       578888664

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.29  E-value=0.0015  Score=51.01  Aligned_cols=46  Identities=26%  Similarity=0.477  Sum_probs=38.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~   72 (147)
                      .+.+++++|.|+ |.+|..+++.|...|+ +|++++|+.++...+...
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~  225 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEE  225 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH
Confidence            478899999987 9999999999999997 899999987665555444

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.28  E-value=0.0027  Score=45.59  Aligned_cols=84  Identities=17%  Similarity=0.217  Sum_probs=58.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+++++++|.|. ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus         8 ~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~   86 (231)
T cd00755           8 KLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAV   86 (231)
T ss_pred             HHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEe
Confidence            367788999987 6899999999999997 788887542                   2334456677777777777777


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++. +....++.      ..+|++|.+..
T Consensus        87 ~~~i~~-~~~~~l~~------~~~D~VvdaiD  111 (231)
T cd00755          87 EEFLTP-DNSEDLLG------GDPDFVVDAID  111 (231)
T ss_pred             eeecCH-hHHHHHhc------CCCCEEEEcCC
Confidence            666553 33333332      24788887754

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.27  E-value=0.002  Score=48.63  Aligned_cols=78  Identities=18%  Similarity=0.295  Sum_probs=47.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC-
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL-  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-  107 (147)
                      |.++||+|++||+|...++.....|+.++++..+.++.+ ...++     +.....   |..+.+ +.+-+.++.  .+ 
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l-----GAd~vi---~y~~~~-~~~~v~~~t--~g~  210 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL-----GADHVI---NYREED-FVEQVRELT--GGK  210 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc-----CCCEEE---cCCccc-HHHHHHHHc--CCC
Confidence            899999999999999999888888976666555443333 33332     332211   222222 222222221  22 


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+++...|.
T Consensus       211 gvDvv~D~vG~  221 (326)
T COG0604         211 GVDVVLDTVGG  221 (326)
T ss_pred             CceEEEECCCH
Confidence            58988888874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.26  E-value=0.0014  Score=48.53  Aligned_cols=38  Identities=24%  Similarity=0.301  Sum_probs=35.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ..++||.++|.|.++-.|+.++..|.+.|+.|+++.+.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            46899999999999889999999999999999999874

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.23  E-value=0.002  Score=47.75  Aligned_cols=40  Identities=25%  Similarity=0.410  Sum_probs=35.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      ..+.+++++|+|. |++|+++++.|...|++|++++|+.++
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~  186 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD  186 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            3688999999999 669999999999999999999998654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.20  E-value=0.0041  Score=45.63  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=55.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+++.+++|.|+ ||+|..+++.|+..|. ++++++.+.                   .+.+.+.+.+.+.+|..++..+
T Consensus        27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i  105 (268)
T PRK15116         27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV  105 (268)
T ss_pred             HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence            378889999987 6899999999999994 788887641                   1122345666677676676665


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ..-+ +++....++.      ...|+||.+..
T Consensus       106 ~~~i-~~e~~~~ll~------~~~D~VIdaiD  130 (268)
T PRK15116        106 DDFI-TPDNVAEYMS------AGFSYVIDAID  130 (268)
T ss_pred             eccc-ChhhHHHHhc------CCCCEEEEcCC
Confidence            3322 3444444332      25788877765

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.19  E-value=0.0012  Score=45.18  Aligned_cols=40  Identities=25%  Similarity=0.325  Sum_probs=36.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.+|+++|.|++.-+|..+++.|.+.|++|+++.|+.+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~   79 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK   79 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence            3689999999999777899999999999999999999854

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.18  E-value=0.0048  Score=43.20  Aligned_cols=82  Identities=18%  Similarity=0.272  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+++++++|.|+ +|+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++...
T Consensus        18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~   96 (197)
T cd01492          18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD   96 (197)
T ss_pred             HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999985 5699999999999997 688886541                   1234456667888777777776


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...+++  ...+++       ..+|++|.+..
T Consensus        97 ~~~~~~--~~~~~~-------~~~dvVi~~~~  119 (197)
T cd01492          97 TDDISE--KPEEFF-------SQFDVVVATEL  119 (197)
T ss_pred             ecCccc--cHHHHH-------hCCCEEEECCC
Confidence            665542  122222       26788887643

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=97.17  E-value=0.0023  Score=47.58  Aligned_cols=39  Identities=21%  Similarity=0.360  Sum_probs=33.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .|.+++|+|+++++|...++.....|++|+.+.++.++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~  181 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV  181 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            578999999999999998888888899999888775543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=97.15  E-value=0.0028  Score=49.38  Aligned_cols=46  Identities=22%  Similarity=0.385  Sum_probs=38.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~   72 (147)
                      .+.+++++|.|+ |.+|..+++.|...| .+|++++|+.++...+.+.
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~  223 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKE  223 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            478899999997 999999999999999 6899999987655544443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=97.14  E-value=0.0025  Score=47.68  Aligned_cols=46  Identities=22%  Similarity=0.413  Sum_probs=37.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l   73 (147)
                      +.+++++|.|+ |.+|..+++.|...| .+|++++|+.++..++...+
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~  222 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL  222 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc
Confidence            67899999987 999999999999876 47999999877665555543

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.13  E-value=0.0033  Score=44.99  Aligned_cols=79  Identities=19%  Similarity=0.198  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..+.+++|+|+++ +|.++++.+...|.+|+++.++++..+.+ .   ..  +...   ..|..+.+....+.   ....
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~--g~~~---~~~~~~~~~~~~~~---~~~~  199 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-K---EL--GADH---VIDYKEEDLEEELR---LTGG  199 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-H---Hh--CCce---eccCCcCCHHHHHH---HhcC
Confidence            4678999999988 99999998888999999998875443322 2   21  2221   12333333333332   2234


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|+++++++.
T Consensus       200 ~~~d~vi~~~~~  211 (271)
T cd05188         200 GGADVVIDAVGG  211 (271)
T ss_pred             CCCCEEEECCCC
Confidence            579999999875

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.12  E-value=0.0029  Score=47.70  Aligned_cols=34  Identities=24%  Similarity=0.221  Sum_probs=28.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNMA   64 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~   64 (147)
                      ++.|+|++|.+|..++..|+..+.       .+++.++++.
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~   41 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA   41 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc
Confidence            378999999999999999998653       5999998643

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.11  E-value=0.016  Score=43.55  Aligned_cols=79  Identities=10%  Similarity=0.184  Sum_probs=55.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCC-CeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPT-AKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      -.++++.|+|+ |.+|..++..|+..|.  .+++.+++.+.+.-...++....+- .++.. ..  .+.+.         
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~---------   70 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD---------   70 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH---------
Confidence            45679999998 9999999999998885  7999999888776666666553211 12222 11  12211         


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                        +...|++|..||...
T Consensus        71 --~~~adivIitag~~~   85 (315)
T PRK00066         71 --CKDADLVVITAGAPQ   85 (315)
T ss_pred             --hCCCCEEEEecCCCC
Confidence              126999999999853

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=97.11  E-value=0.0011  Score=38.95  Aligned_cols=35  Identities=23%  Similarity=0.205  Sum_probs=22.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHH-HCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLA-LRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~-~~g~~v~~~~r~~   63 (147)
                      .|++||+|+|+|.|++-...++ ..|++.+.+....
T Consensus        39 pK~VLViGaStGyGLAsRIa~aFg~gA~TiGV~fEk   74 (78)
T PF12242_consen   39 PKKVLVIGASTGYGLASRIAAAFGAGADTIGVSFEK   74 (78)
T ss_dssp             -SEEEEES-SSHHHHHHHHHHHHCC--EEEEEE---
T ss_pred             CceEEEEecCCcccHHHHHHHHhcCCCCEEEEeecc
Confidence            3899999999999999444444 5678888877653

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.10  E-value=0.0023  Score=49.99  Aligned_cols=58  Identities=19%  Similarity=0.137  Sum_probs=40.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      .++|.|+ |.+|..+++.|.++|..|++++++++..+.+.+.       ..+.++.+|.++.+.+.
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-------~~~~~~~gd~~~~~~l~   59 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-------LDVRTVVGNGSSPDVLR   59 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-------cCEEEEEeCCCCHHHHH
Confidence            5788887 8999999999999999999999987654443321       12344455665554443

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=97.09  E-value=0.0048  Score=46.26  Aligned_cols=78  Identities=21%  Similarity=0.347  Sum_probs=52.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      +++|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+..+++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~   79 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK   79 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence            3678886 8999999999999997 788876532                   223445566677767777777777776


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      +......+++       ..|+||++.
T Consensus        80 ~~~~~~~f~~-------~~DvVv~a~   98 (312)
T cd01489          80 DPDFNVEFFK-------QFDLVFNAL   98 (312)
T ss_pred             CccchHHHHh-------cCCEEEECC
Confidence            5322222322       577777664

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=97.06  E-value=0.0051  Score=45.19  Aligned_cols=39  Identities=26%  Similarity=0.431  Sum_probs=34.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+++++|+|+++++|.+++..+...|++|+++.++.+..
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC  177 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            578999999999999999999989999999988875543

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.02  E-value=0.0073  Score=45.98  Aligned_cols=80  Identities=16%  Similarity=0.304  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|+.+||.||++|+|.+.++-....|+..+++.++.++. ++.+.+     +...   ..|-.+++ +.+.+....  .
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l-----GAd~---vvdy~~~~-~~e~~kk~~--~  223 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL-----GADE---VVDYKDEN-VVELIKKYT--G  223 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc-----CCcE---eecCCCHH-HHHHHHhhc--C
Confidence            4678999999999999999988888885555555554432 333333     3322   24555543 333333221  5


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|+|+-|.|-
T Consensus       224 ~~~DvVlD~vg~  235 (347)
T KOG1198|consen  224 KGVDVVLDCVGG  235 (347)
T ss_pred             CCccEEEECCCC
Confidence            689999999986

>PRK14851 hypothetical protein; Provisional

Probab=97.00  E-value=0.0071  Score=49.88  Aligned_cols=83  Identities=10%  Similarity=0.223  Sum_probs=60.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|. ||+|..+++.|+..|. ++++++.+.                   .+.+-+.+.+.+.+|..++..+
T Consensus        40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~  118 (679)
T PRK14851         40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF  118 (679)
T ss_pred             HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence            477899999994 7999999999999996 777776431                   1233355667777777888888


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++. +.+..+++       .+|+||.+.-
T Consensus       119 ~~~i~~-~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        119 PAGINA-DNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             ecCCCh-HHHHHHHh-------CCCEEEECCC
Confidence            888864 34555554       5788886653

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.00  E-value=0.016  Score=42.94  Aligned_cols=91  Identities=14%  Similarity=0.075  Sum_probs=58.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCcc-----------chHHHHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAA-----------GTDVKDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~-----------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      -.|.+||.|+++|.|++.-...+= .|+.-+.+......           .........+.. +--..-+..|.=+.+--
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHHHH
Confidence            468999999999998775443332 45655554332111           111222232221 33455667788777778


Q ss_pred             HHHHHHHHhcCCCccEEEEccccC
Q 044688           96 RKFASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~  119 (147)
                      +.+++.++..+|.+|.+|.+-+..
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlAsp  142 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHhhccccEEEEeccCc
Confidence            889999999999999999886643

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=96.99  E-value=0.0042  Score=46.16  Aligned_cols=40  Identities=20%  Similarity=0.276  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|.|+++++|.+++..+...|++|+.+.++.++.+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~  184 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCR  184 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHH
Confidence            5789999999999999999999999999998887755433

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.98  E-value=0.0053  Score=46.26  Aligned_cols=77  Identities=12%  Similarity=0.120  Sum_probs=49.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..+++++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   .|..+. ++.+    +...
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~-~~~~----~~~~  232 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REM-----GADKL---VNPQND-DLDH----YKAE  232 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHc-----CCcEE---ecCCcc-cHHH----Hhcc
Confidence            35889999986 8999999988878898 688888876654322 223     43322   233222 2222    2222


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      .+.+|++|.++|.
T Consensus       233 ~g~~D~vid~~G~  245 (343)
T PRK09880        233 KGYFDVSFEVSGH  245 (343)
T ss_pred             CCCCCEEEECCCC
Confidence            3568999998874

>PRK07411 hypothetical protein; Validated

Probab=96.96  E-value=0.0092  Score=46.15  Aligned_cols=83  Identities=19%  Similarity=0.330  Sum_probs=58.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+...+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+
T Consensus        35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~  113 (390)
T PRK07411         35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY  113 (390)
T ss_pred             HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence            467889999987 6899999999999997 788876531                   2334466777888777788877


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ...++.. ...+++.       ..|+||.+..
T Consensus       114 ~~~~~~~-~~~~~~~-------~~D~Vvd~~d  137 (390)
T PRK07411        114 ETRLSSE-NALDILA-------PYDVVVDGTD  137 (390)
T ss_pred             ecccCHH-hHHHHHh-------CCCEEEECCC
Confidence            7666543 2333333       5677777754

>PLN00203 glutamyl-tRNA reductase

Probab=96.95  E-value=0.0044  Score=49.56  Aligned_cols=46  Identities=15%  Similarity=0.287  Sum_probs=39.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   73 (147)
                      +.+++++|.|+ |.+|..+++.|...|. +|+++.|+.++.+.+...+
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~  310 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF  310 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence            77899999999 9999999999999997 7999999977666655543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.89  E-value=0.012  Score=39.89  Aligned_cols=88  Identities=19%  Similarity=0.179  Sum_probs=55.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-----CCeeEEEEecCCCHHHHHHHHHH--H
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-----TAKVDVLELDLSSLASVRKFASD--F  102 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~--~  102 (147)
                      +++-+.|. |-+|..+++.|++.|++|++.+|++++.+++.+.-.....     -.....+..-+.+.+.+++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            35667777 7899999999999999999999987766655532100000     01233445566777788888887  6


Q ss_pred             HhcCCCccEEEEcccc
Q 044688          103 TTKGLPLNILINNAGI  118 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~  118 (147)
                      .....+=.++|++.-.
T Consensus        81 ~~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   81 LAGLRPGKIIIDMSTI   96 (163)
T ss_dssp             GGGS-TTEEEEE-SS-
T ss_pred             hhccccceEEEecCCc
Confidence            6666566677766543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.89  E-value=0.022  Score=45.53  Aligned_cols=85  Identities=18%  Similarity=0.145  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-------------HH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-------------LA   93 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-------------~~   93 (147)
                      ..+.+++|+|+ |.+|...+..+...|++|+++++++++.+.... +     +.+...+  |..+             .+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-l-----GA~~v~i--~~~e~~~~~~gya~~~s~~  233 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-M-----GAEFLEL--DFEEEGGSGDGYAKVMSEE  233 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeEEEe--ccccccccccchhhhcchh
Confidence            45889999998 689999999999999999999998765443332 3     4543222  2211             11


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           94 SVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      ..++..+.+.+..+..|++|.++|..+
T Consensus       234 ~~~~~~~~~~~~~~gaDVVIetag~pg  260 (509)
T PRK09424        234 FIKAEMALFAEQAKEVDIIITTALIPG  260 (509)
T ss_pred             HHHHHHHHHHhccCCCCEEEECCCCCc
Confidence            122222222333457999999999754

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.88  E-value=0.005  Score=38.93  Aligned_cols=71  Identities=17%  Similarity=0.202  Sum_probs=48.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+    +..  +  +.++.+|.++++.+.++-      ....+.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~----~~~--~--~~~i~gd~~~~~~l~~a~------i~~a~~   65 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEEL----REE--G--VEVIYGDATDPEVLERAG------IEKADA   65 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH----HHT--T--SEEEES-TTSHHHHHHTT------GGCESE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHH----Hhc--c--cccccccchhhhHHhhcC------ccccCE
Confidence            467777 5799999999999777999999986654333    332  2  668889999988776541      125677


Q ss_pred             EEEccc
Q 044688          112 LINNAG  117 (147)
Q Consensus       112 lv~~ag  117 (147)
                      +|....
T Consensus        66 vv~~~~   71 (116)
T PF02254_consen   66 VVILTD   71 (116)
T ss_dssp             EEEESS
T ss_pred             EEEccC
Confidence            766554

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.87  E-value=0.0046  Score=45.48  Aligned_cols=40  Identities=23%  Similarity=0.362  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+++++|+|+++++|.+++..+...|++++.+.++.++.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~  183 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRD  183 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence            5789999999999999999999999999999888754433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.86  E-value=0.013  Score=45.36  Aligned_cols=81  Identities=22%  Similarity=0.360  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +...+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        40 L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  118 (392)
T PRK07878         40 LKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHE  118 (392)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEe
Confidence            57889999987 6899999999999997 788876531                   12333456677777777777766


Q ss_pred             ecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           87 LDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      ..++.. ...++++       ..|+||.+.
T Consensus       119 ~~i~~~-~~~~~~~-------~~D~Vvd~~  140 (392)
T PRK07878        119 FRLDPS-NAVELFS-------QYDLILDGT  140 (392)
T ss_pred             ccCChh-HHHHHHh-------cCCEEEECC
Confidence            666543 2333332       467777664

>PRK05086 malate dehydrogenase; Provisional

Probab=96.86  E-value=0.0082  Score=45.04  Aligned_cols=35  Identities=23%  Similarity=0.273  Sum_probs=28.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHH-C--CCEEEEEEccCc
Q 044688           30 LTAIVTGASSGIGAETTRVLAL-R--GVHVFMAVRNMA   64 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~-~--g~~v~~~~r~~~   64 (147)
                      ++++|+|++|++|.+++..|.. .  +..+++.++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4689999999999999998865 3  347888888743

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=96.85  E-value=0.0055  Score=44.71  Aligned_cols=78  Identities=14%  Similarity=0.118  Sum_probs=51.9

Q ss_pred             EEEecCCCchhHHHHHHHHHCC----CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           32 AIVTGASSGIGAETTRVLALRG----VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +.|+|++|.+|..++..|+..|    .++++.+.++++++....+++......    ....++..++....+       .
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~----~~~~i~~~~d~~~~~-------~   69 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL----ADIKVSITDDPYEAF-------K   69 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc----cCcEEEECCchHHHh-------C
Confidence            3689998899999999999988    689999999887777777665442110    011111111122222       2


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      ..|++|..+|...
T Consensus        70 ~aDiVv~t~~~~~   82 (263)
T cd00650          70 DADVVIITAGVGR   82 (263)
T ss_pred             CCCEEEECCCCCC
Confidence            6899999998753

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.83  E-value=0.01  Score=44.94  Aligned_cols=43  Identities=23%  Similarity=0.238  Sum_probs=35.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      -.|++++|+|.+ |+|..-++.....|++|++.++++++.+.+.
T Consensus       165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~  207 (339)
T COG1064         165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK  207 (339)
T ss_pred             CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH
Confidence            358999999998 9999888877779999999999977654433

>PRK04148 hypothetical protein; Provisional

Probab=96.83  E-value=0.0038  Score=40.99  Aligned_cols=55  Identities=16%  Similarity=0.099  Sum_probs=41.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      +++.+++.|.+  .|.++|..|.+.|++|++++.+++..+.+.+.        .+.++..|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~--------~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL--------GLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh--------CCeEEECcCCCC
Confidence            45789999997  88889999999999999999997754433321        245666777654

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.82  E-value=0.0056  Score=52.60  Aligned_cols=77  Identities=18%  Similarity=0.302  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CE-------------EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG-VH-------------VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA   93 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~   93 (147)
                      ..|.++|.|+ |.+|...++.|++.. +.             |++++++.+..+.+.+..      .++..+..|++|.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~------~~~~~v~lDv~D~e  640 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI------ENAEAVQLDVSDSE  640 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc------CCCceEEeecCCHH
Confidence            4678999997 899999999998753 33             777888765544443322      24567899999998


Q ss_pred             HHHHHHHHHHhcCCCccEEEEcccc
Q 044688           94 SVRKFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      ++.++++       .+|+||++...
T Consensus       641 ~L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        641 SLLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHHhhc-------CCCEEEECCCc
Confidence            8877655       59999999754

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.80  E-value=0.015  Score=41.87  Aligned_cols=78  Identities=21%  Similarity=0.335  Sum_probs=52.0

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ++|.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+..++++
T Consensus         2 VlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~~   80 (234)
T cd01484           2 VLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVGP   80 (234)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCCh
Confidence            66777 58999999999999997 788876632                   1223345566677777778777777755


Q ss_pred             HHHHH-HHHHHHHhcCCCccEEEEccc
Q 044688           92 LASVR-KFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        92 ~~~~~-~~~~~~~~~~~~id~lv~~ag  117 (147)
                      .+... .++       ..+|++|++..
T Consensus        81 ~~~~~~~f~-------~~~DvVi~a~D  100 (234)
T cd01484          81 EQDFNDTFF-------EQFHIIVNALD  100 (234)
T ss_pred             hhhchHHHH-------hCCCEEEECCC
Confidence            33221 222       36788887743

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.79  E-value=0.0062  Score=40.36  Aligned_cols=40  Identities=23%  Similarity=0.307  Sum_probs=36.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++||.++|.|-+.-+|+.++..|.++|+.|..+++...
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            4689999999999999999999999999999999986543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.77  E-value=0.0099  Score=44.26  Aligned_cols=39  Identities=26%  Similarity=0.335  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+.+++++|.|. |++|+.++..|...|++|++++|+.++
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            467999999997 679999999999999999999998654

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.76  E-value=0.012  Score=44.60  Aligned_cols=89  Identities=18%  Similarity=0.196  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH-----HHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK-----DAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~-----~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++.||++.|.|. |.||+.+|+.|...|++|+..+|+........     .++.+....+++..+.+-.+..  ...++
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~~~l~ell~~aDiV~l~lP~t~~--T~~~i  222 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPEAEKELGAEYRPLEELLRESDFVSLHVPLTKE--TYHMI  222 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChhhHHHcCCEecCHHHHHhhCCEEEEeCCCChH--Hhhcc
Confidence            4789999999999 88999999999999999999888653321100     0122222245677777765542  22233


Q ss_pred             -HHHHhcCCCccEEEEcc
Q 044688          100 -SDFTTKGLPLNILINNA  116 (147)
Q Consensus       100 -~~~~~~~~~id~lv~~a  116 (147)
                       ++..+...+=-++||.+
T Consensus       223 ~~~~~~~mk~ga~lIN~a  240 (333)
T PRK13243        223 NEERLKLMKPTAILVNTA  240 (333)
T ss_pred             CHHHHhcCCCCeEEEECc
Confidence             23333333334555554

>PRK07877 hypothetical protein; Provisional

Probab=96.73  E-value=0.013  Score=48.64  Aligned_cols=81  Identities=21%  Similarity=0.259  Sum_probs=61.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccC------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNM------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+++|+|.|. | +|..++..|+..|.  ++++++.+.                  .+.+.+.+.+.+.+|..++..+.
T Consensus       105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~  182 (722)
T PRK07877        105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFT  182 (722)
T ss_pred             HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEe
Confidence            78899999999 4 99999999999983  888886631                  23344566777777778888888


Q ss_pred             ecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           87 LDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ..++ .+.+.++++       ..|+||.|.-
T Consensus       183 ~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        183 DGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             ccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            8887 455666554       5788887764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=96.72  E-value=0.023  Score=42.99  Aligned_cols=90  Identities=21%  Similarity=0.202  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH---HHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK---DAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~---~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..+.|+++.|.|. |.||.++|+.|...|++|+..+++.+......   ..+......+++..+.+-.+.. ...-+-++
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999987 67999999999999999999998764322111   1222222356777777766543 12222334


Q ss_pred             HHhcCCCccEEEEcc
Q 044688          102 FTTKGLPLNILINNA  116 (147)
Q Consensus       102 ~~~~~~~id~lv~~a  116 (147)
                      ......+=-++||.+
T Consensus       220 ~l~~mk~gavlIN~a  234 (330)
T PRK12480        220 MFDHVKKGAILVNAA  234 (330)
T ss_pred             HHhcCCCCcEEEEcC
Confidence            444443323455444

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.70  E-value=0.013  Score=43.39  Aligned_cols=40  Identities=25%  Similarity=0.303  Sum_probs=34.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|+|+++++|.+++..+...|++|+.+.++.++.+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~  181 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTA  181 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence            4789999999999999999988899999999888765543

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.69  E-value=0.011  Score=44.32  Aligned_cols=76  Identities=13%  Similarity=0.121  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~  106 (147)
                      .|+++-|+|+.| +|.--++.-..-|++|+.++++.++.+++.+.|     +++...   |.+ |++.++++.+..   .
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-----GAd~fv---~~~~d~d~~~~~~~~~---d  248 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-----GADVFV---DSTEDPDIMKAIMKTT---D  248 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-----CcceeE---EecCCHHHHHHHHHhh---c
Confidence            789999999987 887655555556999999999987778888777     555433   555 677666665532   3


Q ss_pred             CCccEEEEc
Q 044688          107 LPLNILINN  115 (147)
Q Consensus       107 ~~id~lv~~  115 (147)
                      +.+|.++|-
T Consensus       249 g~~~~v~~~  257 (360)
T KOG0023|consen  249 GGIDTVSNL  257 (360)
T ss_pred             Ccceeeeec
Confidence            456666544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.69  E-value=0.022  Score=42.72  Aligned_cols=89  Identities=13%  Similarity=0.089  Sum_probs=55.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH---H--HHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD---V--KDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~---~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ..+.+|++.|.|. |.||+++|+.|...|++|+..++..+....   .  ..++.+..+.+++..+.+-.+..  ...++
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~~~~~~~~~~~l~e~l~~aDvvv~~lPlt~~--T~~li  208 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWPGVQSFAGREELSAFLSQTRVLINLLPNTPE--TVGII  208 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCceeecccccHHHHHhcCCEEEECCCCCHH--HHHHh
Confidence            3588999999987 679999999999999999998886543211   0  11232222356777777666543  34444


Q ss_pred             H-HHHhcCCCccEEEEcc
Q 044688          100 S-DFTTKGLPLNILINNA  116 (147)
Q Consensus       100 ~-~~~~~~~~id~lv~~a  116 (147)
                      . +..++..+=-++||.+
T Consensus       209 ~~~~l~~mk~ga~lIN~a  226 (312)
T PRK15469        209 NQQLLEQLPDGAYLLNLA  226 (312)
T ss_pred             HHHHHhcCCCCcEEEECC
Confidence            3 3344444333555544

>TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p

Probab=96.69  E-value=0.012  Score=48.06  Aligned_cols=62  Identities=19%  Similarity=0.325  Sum_probs=46.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc----------------------CccchHHHHHHHhhCCCCeeE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN----------------------MAAGTDVKDAIVKEIPTAKVD   83 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~----------------------~~~~~~~~~~l~~~~~~~~~~   83 (147)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++++++.+                      ..+.+.+.+.+++.+|+.++.
T Consensus       336 L~~~kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D~Ve~SNL~RQ~Lf~~~Dv~~~Gk~KA~aAa~~Lk~InP~v~i~  414 (664)
T TIGR01381       336 YSQLKVLLLGA-GTLGCNVARCLIGWGVRHITFVDNGKVSYSNPVRQSLSNFEDCLLGGRGKAETAQKALKRIFPSIQAT  414 (664)
T ss_pred             HhcCeEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEECCCccccccccchhhhhhcCCcHHHHHHHHHHHHCCCcEEE
Confidence            46789999988 7899999999999997 78887642                      112334566777777777777


Q ss_pred             EEEecC
Q 044688           84 VLELDL   89 (147)
Q Consensus        84 ~~~~D~   89 (147)
                      .+...+
T Consensus       415 ~~~~~I  420 (664)
T TIGR01381       415 GHRLTV  420 (664)
T ss_pred             Eeeeee
Confidence            766653

This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=96.67  E-value=0.016  Score=42.62  Aligned_cols=40  Identities=20%  Similarity=0.323  Sum_probs=34.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      ..+.+++|.|+++++|.+++......|++|+.+.++.++.
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  180 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERA  180 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            3578999999999999999999889999998888775543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.65  E-value=0.0089  Score=41.09  Aligned_cols=41  Identities=27%  Similarity=0.283  Sum_probs=35.0

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      ...+.|+++.|.|. |.||+++|+.+..-|++|+..+|....
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~   71 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKP   71 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHH
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCCh
Confidence            34689999999988 789999999999999999999998654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.64  E-value=0.019  Score=43.79  Aligned_cols=78  Identities=15%  Similarity=0.110  Sum_probs=48.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .+.+++|+|+ +++|...+..+...|+ +|+.++++.++.+.+ .++     +....   .|..+ .+.+.+.+.++.. 
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~-----Ga~~~---i~~~~~~~~~~~~v~~~~~-  253 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKL-----GATDC---VNPNDYDKPIQEVIVEITD-  253 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCeE---EcccccchhHHHHHHHHhC-
Confidence            5789999985 8999999888878898 799988876554433 222     33221   13222 1223333333322 


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                       +++|++|.++|
T Consensus       254 -~g~d~vid~~G  264 (368)
T TIGR02818       254 -GGVDYSFECIG  264 (368)
T ss_pred             -CCCCEEEECCC
Confidence             36888888876

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.64  E-value=0.016  Score=43.09  Aligned_cols=40  Identities=28%  Similarity=0.393  Sum_probs=33.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++.+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~  178 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAE  178 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHH
Confidence            5789999999999999998888888999999887755433

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PLN02740 Alcohol dehydrogenase-like

Probab=96.63  E-value=0.016  Score=44.42  Aligned_cols=79  Identities=13%  Similarity=0.105  Sum_probs=48.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  105 (147)
                      .|.+++|.|+ |++|...+..+...|+ +|+.+++++++.+.+ .++     +... +  .|..+. +.+.+.+.++.. 
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~-~--i~~~~~~~~~~~~v~~~~~-  266 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEM-----GITD-F--INPKDSDKPVHERIREMTG-  266 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHc-----CCcE-E--EecccccchHHHHHHHHhC-
Confidence            5789999985 9999999988888898 699988876554433 222     3322 1  132221 123333333322 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +.+|+++.++|.
T Consensus       267 -~g~dvvid~~G~  278 (381)
T PLN02740        267 -GGVDYSFECAGN  278 (381)
T ss_pred             -CCCCEEEECCCC
Confidence             258888888774

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.63  E-value=0.028  Score=44.13  Aligned_cols=37  Identities=24%  Similarity=0.432  Sum_probs=32.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      ++.|+||.|.+|.++++.|.+.|.+|++++|+++...
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~   38 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGK   38 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHH
Confidence            5889999999999999999999999999999866543

>PRK14852 hypothetical protein; Provisional

Probab=96.63  E-value=0.019  Score=49.04  Aligned_cols=82  Identities=12%  Similarity=0.219  Sum_probs=58.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+.+|+|.|. ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus       330 L~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~~  408 (989)
T PRK14852        330 LLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSFP  408 (989)
T ss_pred             HhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEEe
Confidence            67889999995 7999999999999986 777775431                   23344566677777777888887


Q ss_pred             ecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           87 LDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ..++. +.+.++++       .+|+||.+..
T Consensus       409 ~~I~~-en~~~fl~-------~~DiVVDa~D  431 (989)
T PRK14852        409 EGVAA-ETIDAFLK-------DVDLLVDGID  431 (989)
T ss_pred             cCCCH-HHHHHHhh-------CCCEEEECCC
Confidence            77643 44555544       5788886543

>PRK06487 glycerate dehydrogenase; Provisional

Probab=96.62  E-value=0.0084  Score=45.06  Aligned_cols=67  Identities=15%  Similarity=0.196  Sum_probs=46.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++.||++.|.|. |.||+++|+.+..-|.+|+..++..........++....+.+++..+.+-++..
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~~~~~~~l~ell~~sDiv~l~lPlt~~  210 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPARPDRLPLDELLPQVDALTLHCPLTEH  210 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcccccccCHHHHHHhCCEEEECCCCChH
Confidence            3699999999998 789999999999999999988775321100001122222246777777777654

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=96.60  E-value=0.02  Score=43.65  Aligned_cols=78  Identities=13%  Similarity=0.085  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  105 (147)
                      .|.+++|.|+ +++|...+..+...|+ +|+.++++.++.+.+ .++     +....   .|..+. +++.+.+.+... 
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l-----Ga~~~---i~~~~~~~~~~~~v~~~~~-  254 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF-----GATDC---VNPKDHDKPIQQVLVEMTD-  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc-----CCCEE---EcccccchHHHHHHHHHhC-
Confidence            4789999975 8999999998888999 699998886654433 222     33221   233222 234444444432 


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                       +++|+++.++|
T Consensus       255 -~g~d~vid~~g  265 (368)
T cd08300         255 -GGVDYTFECIG  265 (368)
T ss_pred             -CCCcEEEECCC
Confidence             36899998876

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.60  E-value=0.012  Score=43.60  Aligned_cols=40  Identities=28%  Similarity=0.385  Sum_probs=34.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~  185 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAAD  185 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHH
Confidence            3679999999999999999988889999999888765543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.58  E-value=0.0077  Score=44.85  Aligned_cols=41  Identities=24%  Similarity=0.225  Sum_probs=37.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .++.||.+.|.|.++-+|+.++..|.++|+.|+++.+..+.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~  195 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTD  195 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCC
Confidence            46899999999999999999999999999999999776543

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.58  E-value=0.037  Score=41.27  Aligned_cols=57  Identities=18%  Similarity=0.314  Sum_probs=39.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---------------------ccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---------------------AAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---------------------~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ++|.|+ ||+|..+++.|+..|. ++++++.+.                     .+.+.+.+.+++.+|..++..+...+
T Consensus         2 VLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D~Ve~sNL~RQ~L~~~~D~~iGk~Ka~aaa~~L~~iNP~v~v~~~~~~I   80 (307)
T cd01486           2 CLLLGA-GTLGCNVARNLLGWGVRHITFVDSGKVSYSNPVRQSLFTFEDCKGGKPKAEAAAERLKEIFPSIDATGIVLSI   80 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEeccccCCcccccccchhhcCccHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            677766 6899999999999997 677775421                     12233556677777766766665443

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.56  E-value=0.024  Score=42.81  Aligned_cols=39  Identities=23%  Similarity=0.221  Sum_probs=33.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .|.+++|.|+ +++|...+..+...|++|+++++++++.+
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~  204 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLE  204 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHH
Confidence            4789999999 99999998888888999999888766544

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.56  E-value=0.0093  Score=44.70  Aligned_cols=78  Identities=18%  Similarity=0.171  Sum_probs=48.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|++ |+++++++++.+.+ .++     +...   ..|..+.+ ..++. +.. ..
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~-----ga~~---~i~~~~~~-~~~~~-~~~-~~  229 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL-----GADF---VINSGQDD-VQEIR-ELT-SG  229 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCE---EEcCCcch-HHHHH-HHh-CC
Confidence            4889999985 89999999988889998 98888776543322 223     3321   12333332 32222 221 12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.+.|.
T Consensus       230 ~~~d~vid~~g~  241 (339)
T cd08239         230 AGADVAIECSGN  241 (339)
T ss_pred             CCCCEEEECCCC
Confidence            258888888763

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.55  E-value=0.0095  Score=44.08  Aligned_cols=39  Identities=28%  Similarity=0.313  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+.+++|.|+++++|.+++......|++++.+.++.++.
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~  177 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV  177 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence            578999999999999999998888999998888765543

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3

Probab=96.53  E-value=0.023  Score=42.23  Aligned_cols=75  Identities=20%  Similarity=0.305  Sum_probs=51.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ++|.| .||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+..++.+
T Consensus         2 VlVVG-aGGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~~   80 (291)
T cd01488           2 ILVIG-AGGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQD   80 (291)
T ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccCc
Confidence            67777 57999999999999997 788876431                   1234455666777777788888777765


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      .+  ..++       ..+|++|.+.
T Consensus        81 ~~--~~f~-------~~fdvVi~al   96 (291)
T cd01488          81 KD--EEFY-------RQFNIIICGL   96 (291)
T ss_pred             hh--HHHh-------cCCCEEEECC
Confidence            32  1222       3678888764

UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.52  E-value=0.007  Score=42.96  Aligned_cols=41  Identities=17%  Similarity=0.285  Sum_probs=35.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      ++.|+|++|.+|.+++..|++.|++|++.+|++++.+.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            47899999999999999999999999999998776655544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.52  E-value=0.01  Score=43.97  Aligned_cols=39  Identities=26%  Similarity=0.365  Sum_probs=35.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ..++||.++|+|.+.-+|+.++..|...|+.|+++.+..
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            368999999999999999999999999999999998754

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.52  E-value=0.028  Score=42.79  Aligned_cols=41  Identities=17%  Similarity=0.242  Sum_probs=32.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      .|++++|.|+ |++|...+..+...|++|++++.+.++..++
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~  223 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEA  223 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhH
Confidence            5789999765 8999999988888899988887765544333

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.48  E-value=0.012  Score=46.00  Aligned_cols=62  Identities=16%  Similarity=0.216  Sum_probs=44.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      +..+.++|.|+ |.+|..+++.|.+.|.+|++++++++..+++....      ..+.++..|.++++.+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~------~~~~~i~gd~~~~~~L  290 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEEL------PNTLVLHGDGTDQELL  290 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHC------CCCeEEECCCCCHHHH
Confidence            45688999999 89999999999999999999998876544433321      1234455566555444

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=96.47  E-value=0.011  Score=43.29  Aligned_cols=39  Identities=26%  Similarity=0.285  Sum_probs=33.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+.+++|.|+++++|.+++......|++|+.+.+++++.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~  174 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKA  174 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence            578999999999999999998888999998888765543

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=96.46  E-value=0.021  Score=34.35  Aligned_cols=36  Identities=31%  Similarity=0.446  Sum_probs=30.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVR   61 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r   61 (147)
                      ..+.+++++|.|. |+.|+.++..|.+. +.++.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            3478899999999 99999999999998 457777766

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.46  E-value=0.037  Score=39.02  Aligned_cols=39  Identities=15%  Similarity=0.348  Sum_probs=33.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++|+.++|.|| |.+|..-++.|++.|++|++++.+..
T Consensus         5 l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~   43 (205)
T TIGR01470         5 ANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE   43 (205)
T ss_pred             EEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence            4689999999998 56889999999999999999887543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=96.45  E-value=0.014  Score=43.14  Aligned_cols=39  Identities=23%  Similarity=0.221  Sum_probs=33.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+.+++|.|+++++|.+++..+...|++++.+.++.++.
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~  176 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQV  176 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHH
Confidence            568999999999999999999999999998888776543

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.44  E-value=0.013  Score=42.85  Aligned_cols=39  Identities=26%  Similarity=0.371  Sum_probs=34.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+.+++|+|+++++|.+++..+...|+.|+.+.++.++.
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~  177 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKL  177 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHH
Confidence            578999999999999999999999999999988875443

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.43  E-value=0.01  Score=40.25  Aligned_cols=40  Identities=25%  Similarity=0.352  Sum_probs=32.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++||.++|.|.+.-+|+.++..|.++|+.|.++....+
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~   71 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTK   71 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSS
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCC
Confidence            4699999999999999999999999999999999887653

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.42  E-value=0.0074  Score=41.64  Aligned_cols=42  Identities=24%  Similarity=0.266  Sum_probs=32.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      ++.|.|+ |.+|..+|..++..|++|.+.+++++.++...+.+
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i   42 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRI   42 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHH
Confidence            3667787 89999999999999999999999987665544433

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.41  E-value=0.045  Score=41.11  Aligned_cols=83  Identities=20%  Similarity=0.138  Sum_probs=56.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.++||.|+ |.||...-..+..-|+ +|++++..+.+++-+.+ +     +.++..-...-.+.+.+.+.++......
T Consensus       169 ~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~-----Ga~~~~~~~~~~~~~~~~~~v~~~~g~~  241 (354)
T KOG0024|consen  169 KGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F-----GATVTDPSSHKSSPQELAELVEKALGKK  241 (354)
T ss_pred             cCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h-----CCeEEeeccccccHHHHHHHHHhhcccc
Confidence            5778999998 6799888888777887 89999988776654444 4     5555443333334555555555444322


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                       .+|+.|.|+|.
T Consensus       242 -~~d~~~dCsG~  252 (354)
T KOG0024|consen  242 -QPDVTFDCSGA  252 (354)
T ss_pred             -CCCeEEEccCc
Confidence             39999999986

>PLN02928 oxidoreductase family protein

Probab=96.39  E-value=0.018  Score=43.90  Aligned_cols=37  Identities=27%  Similarity=0.337  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ..+.||++.|.|. |.||+++|+.|...|++|+..+|+
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4689999999998 789999999999999999999886

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.38  E-value=0.067  Score=42.82  Aligned_cols=85  Identities=21%  Similarity=0.183  Sum_probs=55.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-------------CHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-------------SLA   93 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-------------~~~   93 (147)
                      ..+.+++|.|+ |.+|...+..+...|++|++++++.++.+.+.. +     +.+.  +..|..             +.+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l-----Ga~~--v~v~~~e~g~~~~gYa~~~s~~  232 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M-----GAEF--LELDFKEEGGSGDGYAKVMSEE  232 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c-----CCeE--EeccccccccccccceeecCHH
Confidence            45679999996 889999999999999999999988664332222 2     3332  222321             233


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           94 SVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      ..++..+...+.....|++|+++-+.+
T Consensus       233 ~~~~~~~~~~e~~~~~DIVI~TalipG  259 (511)
T TIGR00561       233 FIAAEMELFAAQAKEVDIIITTALIPG  259 (511)
T ss_pred             HHHHHHHHHHHHhCCCCEEEECcccCC
Confidence            344444444455567999999995544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.38  E-value=0.013  Score=38.11  Aligned_cols=89  Identities=19%  Similarity=0.235  Sum_probs=51.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhC---C---CCeeEEEEecCCCHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEI---P---TAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~---~---~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .-++-|.|+ |-+|.++++.|.+.|+.|..++ |+.++.+++...+....   .   -.+...+.+-+.|. .+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            456788888 7899999999999999987764 55544444444331100   0   01233333444444 68888888


Q ss_pred             HHhc--CCCccEEEEccccC
Q 044688          102 FTTK--GLPLNILINNAGIM  119 (147)
Q Consensus       102 ~~~~--~~~id~lv~~ag~~  119 (147)
                      +...  +.+=.+++|++|..
T Consensus        88 La~~~~~~~g~iVvHtSGa~  107 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGAL  107 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS-
T ss_pred             HHHhccCCCCcEEEECCCCC
Confidence            8765  44556999999965

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.37  E-value=0.09  Score=39.65  Aligned_cols=40  Identities=15%  Similarity=0.129  Sum_probs=33.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAG   66 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~   66 (147)
                      +...+++.|+| +|.+|..++..++..|. .+++++.+++..
T Consensus         3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            34557899999 58899999999999994 899999988754

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=96.37  E-value=0.01  Score=40.97  Aligned_cols=83  Identities=17%  Similarity=0.241  Sum_probs=57.3

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .+..+.++++.++|.|++|-.|..+.+.+++++-  +|+++.|.+.- ....        +..+.....|....++.   
T Consensus        10 lrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~-d~at--------~k~v~q~~vDf~Kl~~~---   77 (238)
T KOG4039|consen   10 LREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELP-DPAT--------DKVVAQVEVDFSKLSQL---   77 (238)
T ss_pred             HHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCC-Cccc--------cceeeeEEechHHHHHH---
Confidence            3445678899999999999999999999999873  79998886311 1000        34555556666444433   


Q ss_pred             HHHHHhcCCCccEEEEccccC
Q 044688           99 ASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        99 ~~~~~~~~~~id~lv~~ag~~  119 (147)
                      +..    +.++|+++.+-|-.
T Consensus        78 a~~----~qg~dV~FcaLgTT   94 (238)
T KOG4039|consen   78 ATN----EQGPDVLFCALGTT   94 (238)
T ss_pred             Hhh----hcCCceEEEeeccc
Confidence            332    34799999887754

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=96.34  E-value=0.037  Score=42.10  Aligned_cols=78  Identities=14%  Similarity=0.159  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  105 (147)
                      .|.+++|.|+ +++|...+..+...|+ +|+.++++.++.+.+ .++     +....+   |..+. +.+.+.+.+... 
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~-----Ga~~~i---~~~~~~~~~~~~v~~~~~-  255 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKF-----GVTEFV---NPKDHDKPVQEVIAEMTG-  255 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCceEE---cccccchhHHHHHHHHhC-
Confidence            5789999985 8999998888888898 799998876544332 222     332111   22221 233333444332 


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                       +.+|+++.+.|
T Consensus       256 -~~~d~vid~~G  266 (369)
T cd08301         256 -GGVDYSFECTG  266 (369)
T ss_pred             -CCCCEEEECCC
Confidence             25888888765

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=96.33  E-value=0.039  Score=42.34  Aligned_cols=40  Identities=20%  Similarity=0.333  Sum_probs=33.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|+|+++++|.+.+..+...|++++.+.++.++.+
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~  232 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAE  232 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHH
Confidence            4689999999999999999888888999888887655443

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.33  E-value=0.03  Score=40.11  Aligned_cols=36  Identities=17%  Similarity=0.367  Sum_probs=32.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEEcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV---HVFMAVRN   62 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~---~v~~~~r~   62 (147)
                      .+++++++|.|+ |+.|.+++..|.+.|.   ++++++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            578899999999 8999999999999996   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.32  E-value=0.052  Score=40.55  Aligned_cols=37  Identities=27%  Similarity=0.410  Sum_probs=32.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++++|.|+++++|.++++.+...|++++.+.++.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5789999999999999999999899999888877653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=96.30  E-value=0.051  Score=40.27  Aligned_cols=38  Identities=13%  Similarity=0.363  Sum_probs=32.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+.+++|.|+++++|..++..+...|++++.+.++.++
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  177 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK  177 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            46899999999999999999999999998877776544

>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1

Probab=96.25  E-value=0.042  Score=40.76  Aligned_cols=62  Identities=19%  Similarity=0.254  Sum_probs=44.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+.+++|.|. +|+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++...
T Consensus        16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~   94 (286)
T cd01491          16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS   94 (286)
T ss_pred             HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence            367788999987 6899999999999997 688877542                   1233455567777666666555


Q ss_pred             Eec
Q 044688           86 ELD   88 (147)
Q Consensus        86 ~~D   88 (147)
                      ..+
T Consensus        95 ~~~   97 (286)
T cd01491          95 TGP   97 (286)
T ss_pred             ecc
Confidence            544

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=96.25  E-value=0.024  Score=42.44  Aligned_cols=40  Identities=18%  Similarity=0.198  Sum_probs=34.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|.|+++++|.+++..+...|++|+.+.+++++.+
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~  204 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLE  204 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            4689999999999999999999999999999988765433

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.25  E-value=0.061  Score=34.75  Aligned_cols=80  Identities=16%  Similarity=0.220  Sum_probs=53.5

Q ss_pred             EEEEecCCCchhHHHHHHHHH-CCCEEEE-EEccCc-cc-----------------hHHHHHHHhhCCCCeeEEEEecCC
Q 044688           31 TAIVTGASSGIGAETTRVLAL-RGVHVFM-AVRNMA-AG-----------------TDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~-~g~~v~~-~~r~~~-~~-----------------~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      ++.|.|++|-+|+.+++.+.+ .+.+++. ++++.+ ..                 .+-.+++..   ..+   +..|+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~---~~D---VvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLE---EAD---VVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTT---H-S---EEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcc---cCC---EEEEcC
Confidence            578999999999999999999 5777554 555541 00                 011122211   122   567999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEcccc
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      .++.+...++...++  ++.+++-..|+
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999988888776  78899888886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.24  E-value=0.006  Score=38.12  Aligned_cols=38  Identities=24%  Similarity=0.411  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .+++++.+||+|+ |.+|..-++.|++.|++|++++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            3689999999999 7899999999999999999998873

>PLN03139 formate dehydrogenase; Provisional

Probab=96.23  E-value=0.064  Score=41.48  Aligned_cols=89  Identities=20%  Similarity=0.172  Sum_probs=55.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH-------HHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV-------KDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      .++.||++.|.|. |.||+.+++.|...|++|+..+++....+..       ..++.+..+.+++..+.+-.+.  +...
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~~~l~ell~~sDvV~l~lPlt~--~T~~  271 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFEEDLDAMLPKCDVVVINTPLTE--KTRG  271 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceecCCHHHHHhhCCEEEEeCCCCH--HHHH
Confidence            5799999999996 7799999999999999998888764211100       0122222224567666665543  3444


Q ss_pred             HHH-HHHhcCCCccEEEEcc
Q 044688           98 FAS-DFTTKGLPLNILINNA  116 (147)
Q Consensus        98 ~~~-~~~~~~~~id~lv~~a  116 (147)
                      ++. +......+=-++||.+
T Consensus       272 li~~~~l~~mk~ga~lIN~a  291 (386)
T PLN03139        272 MFNKERIAKMKKGVLIVNNA  291 (386)
T ss_pred             HhCHHHHhhCCCCeEEEECC
Confidence            443 3334444444666665

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.23  E-value=0.042  Score=41.47  Aligned_cols=78  Identities=15%  Similarity=-0.002  Sum_probs=48.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccCc--cchHHHHHHHhhC-CC-CeeEEEEecCCCHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNMA--AGTDVKDAIVKEI-PT-AKVDVLELDLSSLASVRK   97 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~~-~~-~~~~~~~~D~~~~~~~~~   97 (147)
                      .+++.|+|++|.+|..++..|+..|.       .+++.+.++.  ++.-...++.... +- .++. +.  -.+.+    
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~-i~--~~~~~----   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIV-IT--DDPNV----   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceE-Ee--cCcHH----
Confidence            46789999999999999999998774       6999998533  2333334443221 00 1111 11  11111    


Q ss_pred             HHHHHHhcCCCccEEEEccccCC
Q 044688           98 FASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                         .    +...|++|.+||...
T Consensus        75 ---~----~~daDivvitaG~~~   90 (322)
T cd01338          75 ---A----FKDADWALLVGAKPR   90 (322)
T ss_pred             ---H----hCCCCEEEEeCCCCC
Confidence               1    236899999999754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=96.23  E-value=0.015  Score=44.81  Aligned_cols=67  Identities=13%  Similarity=0.112  Sum_probs=47.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH--HHHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD--VKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ..+.||++.|.|. |.||+.+++.|...|.+|+.+++.......  ....+.+....+++..+.+-++..
T Consensus       112 ~~L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~  180 (378)
T PRK15438        112 FSLHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKD  180 (378)
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCC
Confidence            4689999999998 789999999999999999998864321110  011122222246788888888764

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=96.21  E-value=0.024  Score=42.54  Aligned_cols=67  Identities=12%  Similarity=0.133  Sum_probs=47.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH-H-HHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD-V-KDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~-~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++.||++.|.|- |.||+++|+.+..-|.+|+..++....... . ...+....+.+++..+.+-+++.
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~~~~~~~~~l~ell~~sDvv~lh~Plt~~  209 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNKNEEYERVSLEELLKTSDIISIHAPLNEK  209 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCccccccCceeecHHHHhhcCCEEEEeCCCCch
Confidence            4799999999998 789999999999999999998875321110 0 11222222246788888877654

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.18  E-value=0.064  Score=42.43  Aligned_cols=76  Identities=14%  Similarity=0.082  Sum_probs=50.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++++++|.|+ |++|.++|+.|.+.|++|+++++... ......+.+.+.  +  +.+...+-..             
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~--g--v~~~~~~~~~-------------   74 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL--G--ATVRLGPGPT-------------   74 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc--C--CEEEECCCcc-------------
Confidence            467889999997 67999999999999999999986543 223334445443  3  2232222111             


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                      .....|.+|.+.|+.
T Consensus        75 ~~~~~D~Vv~s~Gi~   89 (480)
T PRK01438         75 LPEDTDLVVTSPGWR   89 (480)
T ss_pred             ccCCCCEEEECCCcC
Confidence            012589999999975

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=96.17  E-value=0.1  Score=39.48  Aligned_cols=91  Identities=20%  Similarity=0.152  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH------HHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD------AIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~------~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      ..+++|++.|.|- |.+|.++|+.|...|.+|++..+.....+.+..      .+.+....+++..+.+-  +.++ ..+
T Consensus        12 ~~LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~v~sl~Eaak~ADVV~llLP--d~~t-~~V   87 (335)
T PRK13403         12 ELLQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFEVMSVSEAVRTAQVVQMLLP--DEQQ-AHV   87 (335)
T ss_pred             hhhCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCEECCHHHHHhcCCEEEEeCC--ChHH-HHH
Confidence            3589999999998 779999999999999999887665322221111      12222223555555554  3333 455


Q ss_pred             H-HHHHhcCCCccEEEEccccC
Q 044688           99 A-SDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        99 ~-~~~~~~~~~id~lv~~ag~~  119 (147)
                      + +++.....+=.+|+...|+.
T Consensus        88 ~~~eil~~MK~GaiL~f~hgfn  109 (335)
T PRK13403         88 YKAEVEENLREGQMLLFSHGFN  109 (335)
T ss_pred             HHHHHHhcCCCCCEEEECCCcc
Confidence            5 34555555556777777764

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.17  E-value=0.012  Score=43.34  Aligned_cols=43  Identities=19%  Similarity=0.323  Sum_probs=35.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~   72 (147)
                      +++++|.|+ ||.+++++..|.+.|+ +|+++.|+.++.+++.+.
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~  165 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAEL  165 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH
Confidence            468888886 8999999999999997 699999998766655543

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.14  E-value=0.04  Score=41.69  Aligned_cols=34  Identities=35%  Similarity=0.490  Sum_probs=29.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .+.+++|+|+ |++|...+..+...|++|++++++
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~  205 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR  205 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            5789999985 999999998777889999999884

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=96.14  E-value=0.044  Score=42.49  Aligned_cols=42  Identities=10%  Similarity=0.050  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEEccCccchHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV---HVFMAVRNMAAGTDV   69 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~   69 (147)
                      .|.+++|.|++|++|...+..+...|+   +|++++++.++.+.+
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            467999999999999998876666543   798888876654433

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02827 Alcohol dehydrogenase-like

Probab=96.12  E-value=0.051  Score=41.70  Aligned_cols=79  Identities=13%  Similarity=0.173  Sum_probs=47.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~  105 (147)
                      .|.+++|.|+ |++|...+..+...|+ .|+++++++++.+.+ .++     +....   .|..+. +++.+.+.++.. 
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~l-----Ga~~~---i~~~~~~~~~~~~v~~~~~-  261 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTF-----GVTDF---INPNDLSEPIQQVIKRMTG-  261 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCcEE---EcccccchHHHHHHHHHhC-
Confidence            5789999985 8999999888888898 477777665443322 222     33211   232221 233333443322 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|.++|.
T Consensus       262 -~g~d~vid~~G~  273 (378)
T PLN02827        262 -GGADYSFECVGD  273 (378)
T ss_pred             -CCCCEEEECCCC
Confidence             268888888874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.12  E-value=0.056  Score=40.89  Aligned_cols=37  Identities=22%  Similarity=0.296  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~   65 (147)
                      .+.++||+| ++++|..++..+...|+ +|+++.+++++
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~  214 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPER  214 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence            678999997 59999999988888899 89888876544

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.11  E-value=0.0098  Score=41.83  Aligned_cols=38  Identities=16%  Similarity=0.350  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++++|.++|.|+ |.+|...++.|.+.|++|+++.++.
T Consensus         6 l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          6 IDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            4689999999999 7899999999999999999987653

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=96.10  E-value=0.085  Score=39.54  Aligned_cols=34  Identities=26%  Similarity=0.491  Sum_probs=30.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      |.+++|+|+++++|.+++......|++|+.+.++
T Consensus       163 g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~  196 (350)
T cd08248         163 GKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST  196 (350)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc
Confidence            8999999999999999999888899998887754

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.10  E-value=0.023  Score=42.07  Aligned_cols=39  Identities=26%  Similarity=0.326  Sum_probs=35.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++.||+++|.|.+.-+|+.++..|.++|+.|+++....
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            468999999999999999999999999999999987643

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.10  E-value=0.099  Score=40.22  Aligned_cols=73  Identities=15%  Similarity=0.170  Sum_probs=50.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ...++++|+|++ ..|..++..+.+.|++|+.++.++......   +      .+ ..+..|..|.+.+.+++++.    
T Consensus        10 ~~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~---~------ad-~~~~~~~~d~~~l~~~~~~~----   74 (395)
T PRK09288         10 PSATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQ---V------AH-RSHVIDMLDGDALRAVIERE----   74 (395)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHH---h------hh-heEECCCCCHHHHHHHHHHh----
Confidence            355789999875 588999999999999999998876431111   1      01 13456777887777766543    


Q ss_pred             CCccEEEEc
Q 044688          107 LPLNILINN  115 (147)
Q Consensus       107 ~~id~lv~~  115 (147)
                       .+|.++-.
T Consensus        75 -~id~vi~~   82 (395)
T PRK09288         75 -KPDYIVPE   82 (395)
T ss_pred             -CCCEEEEe
Confidence             58877754

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.06  E-value=0.041  Score=42.23  Aligned_cols=37  Identities=22%  Similarity=0.302  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+.+++|.|+ +++|...+......|++|++++++.++
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~  214 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEK  214 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHH
Confidence            5789999876 899999998888889999888876443

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.06  E-value=0.045  Score=40.81  Aligned_cols=79  Identities=14%  Similarity=0.226  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|++++|..|.-..+--.-.|++|+.+.-.+++..-+.+++     +...   -.|-..+ ++.+.+.   +.++
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l-----GfD~---~idyk~~-d~~~~L~---~a~P  217 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL-----GFDA---GIDYKAE-DFAQALK---EACP  217 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc-----CCce---eeecCcc-cHHHHHH---HHCC
Confidence            6899999999999997665554457999999887777665555544     3221   1233233 2333333   3333


Q ss_pred             -CccEEEEcccc
Q 044688          108 -PLNILINNAGI  118 (147)
Q Consensus       108 -~id~lv~~ag~  118 (147)
                       +||+.+-|.|-
T Consensus       218 ~GIDvyfeNVGg  229 (340)
T COG2130         218 KGIDVYFENVGG  229 (340)
T ss_pred             CCeEEEEEcCCc
Confidence             69999999884

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.06  E-value=0.018  Score=38.86  Aligned_cols=37  Identities=14%  Similarity=0.142  Sum_probs=32.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR   61 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r   61 (147)
                      ..+++|+.++|.|| |.+|...++.|++.|++|++++.
T Consensus         8 ~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          8 MFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            35789999999998 56999999999999999988853

>PLN02602 lactate dehydrogenase

Probab=96.05  E-value=0.18  Score=38.60  Aligned_cols=77  Identities=10%  Similarity=0.084  Sum_probs=51.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++.|+|+ |.+|..++..|+..+.  .+++++.+++.+.-...++....+ .... -+... .+.++           +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy~~-----------~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDYAV-----------T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCHHH-----------h
Confidence            68999996 9999999999998874  799999988766655555654311 0111 11111 12221           1


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ..-|++|.+||...
T Consensus       104 ~daDiVVitAG~~~  117 (350)
T PLN02602        104 AGSDLCIVTAGARQ  117 (350)
T ss_pred             CCCCEEEECCCCCC
Confidence            26899999999754

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=96.05  E-value=0.028  Score=41.85  Aligned_cols=79  Identities=25%  Similarity=0.322  Sum_probs=45.8

Q ss_pred             CCCEEEE-ecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIV-TGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~li-tG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+..++| +|+++++|...+......|++|+.+.+++++.+.+.+ +     +.+.. +  |..+.+.... +.+... .
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~-----g~~~~-i--~~~~~~~~~~-v~~~~~-~  210 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-I-----GAEYV-L--NSSDPDFLED-LKELIA-K  210 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCcEE-E--ECCCccHHHH-HHHHhC-C
Confidence            3444544 5999999999988777789999988887654333322 2     33321 1  2222222222 222221 1


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      .++|+++++.|
T Consensus       211 ~~~d~vid~~g  221 (324)
T cd08291         211 LNATIFFDAVG  221 (324)
T ss_pred             CCCcEEEECCC
Confidence            25899998876

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=96.04  E-value=0.055  Score=40.32  Aligned_cols=42  Identities=29%  Similarity=0.410  Sum_probs=35.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      .+.+++|.|+++.+|..++..+...|++++.+.++.++.+.+
T Consensus       162 ~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~  203 (334)
T PRK13771        162 KGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV  203 (334)
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            478999999999999999999999999999888876654443

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.02  E-value=0.17  Score=38.08  Aligned_cols=78  Identities=9%  Similarity=0.047  Sum_probs=51.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCC-CeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPT-AKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..++.|+|+ |.+|..++..|+..|.  .+++++.+++..+-...++....+- ........  +|.+.           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            357889995 9999999999998873  7999999887665556666543210 01111111  12221           


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                      +...|++|.+||...
T Consensus        69 ~~~adivvitaG~~~   83 (312)
T cd05293          69 TANSKVVIVTAGARQ   83 (312)
T ss_pred             hCCCCEEEECCCCCC
Confidence            126899999999754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.01  E-value=0.027  Score=41.71  Aligned_cols=38  Identities=21%  Similarity=0.281  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .++.||.++|.|.+.-+|+.++..|.++|+.|.++...
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            46899999999999999999999999999999988654

>PRK07574 formate dehydrogenase; Provisional

Probab=95.99  E-value=0.062  Score=41.56  Aligned_cols=89  Identities=19%  Similarity=0.171  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH-------HHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV-------KDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-------~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      .++.|+++.|.|. |.||+.+|++|...|++|+..+|.....+..       ...+.+....+++..+.+-.+..  ...
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~~~l~ell~~aDvV~l~lPlt~~--T~~  264 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYHVSFDSLVSVCDVVTIHCPLHPE--TEH  264 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceecCCHHHHhhcCCEEEEcCCCCHH--HHH
Confidence            4689999999998 6699999999999999999998865211100       01222222346777777766543  334


Q ss_pred             HHH-HHHhcCCCccEEEEcc
Q 044688           98 FAS-DFTTKGLPLNILINNA  116 (147)
Q Consensus        98 ~~~-~~~~~~~~id~lv~~a  116 (147)
                      ++. +......+=-++||.+
T Consensus       265 li~~~~l~~mk~ga~lIN~a  284 (385)
T PRK07574        265 LFDADVLSRMKRGSYLVNTA  284 (385)
T ss_pred             HhCHHHHhcCCCCcEEEECC
Confidence            443 2334443434666655

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=95.96  E-value=0.065  Score=39.92  Aligned_cols=39  Identities=13%  Similarity=0.264  Sum_probs=32.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccch
Q 044688           29 GLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGT   67 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~   67 (147)
                      +.+++|.|+++++|.+++...... |++|+.+.+++++.+
T Consensus       149 g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~  188 (336)
T TIGR02817       149 KRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQE  188 (336)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHH
Confidence            789999999999999988766666 999999887755433

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.033  Score=41.23  Aligned_cols=40  Identities=38%  Similarity=0.458  Sum_probs=36.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.||.++|.|-+.-+|+.++..|..+|+.|+++.+...
T Consensus       155 i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        155 IDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            4689999999999999999999999999999999987543

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.95  E-value=0.06  Score=38.78  Aligned_cols=44  Identities=23%  Similarity=0.126  Sum_probs=37.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      .+.|+.+|=.|+++|   -+++.|++.|++|+.++-+++.++.+...
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~h  100 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLH  100 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHh
Confidence            378999999999998   78999999999999999987766655443

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.94  E-value=0.049  Score=39.94  Aligned_cols=41  Identities=37%  Similarity=0.508  Sum_probs=35.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD   68 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   68 (147)
                      .+.+++|.|+++++|.+++..+...|++|+.+.++.++.+.
T Consensus       132 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~  172 (305)
T cd08270         132 LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG  172 (305)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHH
Confidence            48999999999999999999999999999999887654433

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=95.93  E-value=0.14  Score=38.78  Aligned_cols=90  Identities=16%  Similarity=0.092  Sum_probs=54.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .++++++.|.|. |.+|.++++.|...|.+|++..+..++..+....       ..+....+++.++.+-  +. ....+
T Consensus        14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~~s~~eaa~~ADVVvLaVP--d~-~~~~V   89 (330)
T PRK05479         14 LIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEVLTVAEAAKWADVIMILLP--DE-VQAEV   89 (330)
T ss_pred             hhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCeeCCHHHHHhcCCEEEEcCC--HH-HHHHH
Confidence            478899999987 4799999999999999998877764332222111       1111112344443332  22 33555


Q ss_pred             H-HHHHhcCCCccEEEEccccC
Q 044688           99 A-SDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        99 ~-~~~~~~~~~id~lv~~ag~~  119 (147)
                      + +++.....+=.+|++++|+.
T Consensus        90 ~~~~I~~~Lk~g~iL~~a~G~~  111 (330)
T PRK05479         90 YEEEIEPNLKEGAALAFAHGFN  111 (330)
T ss_pred             HHHHHHhcCCCCCEEEECCCCC
Confidence            5 55654443334678888864

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.93  E-value=0.19  Score=37.83  Aligned_cols=40  Identities=13%  Similarity=0.086  Sum_probs=33.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccch
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGT   67 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~   67 (147)
                      ...+++.|+|+ |.+|..++..++..| ..+++.+.+++..+
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~   43 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQ   43 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccch
Confidence            34678999997 889999999999988 68999999876544

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.92  E-value=0.096  Score=39.27  Aligned_cols=33  Identities=27%  Similarity=0.375  Sum_probs=29.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~   63 (147)
                      ++.|+|++|.+|..++..|+..|.  .|+++++++
T Consensus         2 kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           2 KVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            688999999999999999999985  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=95.92  E-value=0.031  Score=42.36  Aligned_cols=39  Identities=21%  Similarity=0.246  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~   67 (147)
                      .+.+++|.|+ +++|...+..+...|++ |+.++++.++.+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~  215 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLE  215 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            4789999985 99999998888888984 888888765433

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=95.90  E-value=0.057  Score=41.16  Aligned_cols=78  Identities=18%  Similarity=0.209  Sum_probs=47.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+.+++|.|+ +++|...+..+...|+ +|+++++++++.+.+ .++     +...   ..|..+.+..+. +.+..  .
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~-----Ga~~---~i~~~~~~~~~~-i~~~~--~  257 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-REL-----GATA---TVNAGDPNAVEQ-VRELT--G  257 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHc-----CCce---EeCCCchhHHHH-HHHHh--C
Confidence            4689999985 8999998888778898 688888776544322 222     3321   123333222222 22222  1


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       258 ~g~d~vid~~G~  269 (371)
T cd08281         258 GGVDYAFEMAGS  269 (371)
T ss_pred             CCCCEEEECCCC
Confidence            268888888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=95.89  E-value=0.069  Score=41.13  Aligned_cols=38  Identities=21%  Similarity=0.322  Sum_probs=32.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+.+++|.|+++++|..++..+...|++++.+.++.++
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~  226 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEK  226 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHH
Confidence            46899999999999999998888889998887766543

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=95.88  E-value=0.064  Score=40.81  Aligned_cols=39  Identities=18%  Similarity=0.137  Sum_probs=31.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   67 (147)
                      .|.+++|.| ++++|...+..+...|+ +|+.++++.++.+
T Consensus       184 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~  223 (365)
T cd08277         184 PGSTVAVFG-LGAVGLSAIMGAKIAGASRIIGVDINEDKFE  223 (365)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence            578999997 59999999888778898 7888888755433

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=95.87  E-value=0.03  Score=43.23  Aligned_cols=66  Identities=21%  Similarity=0.175  Sum_probs=45.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH--HHHHHHhhCCCCeeEEEEecCCC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD--VKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ..+.||++.|.|. |.||+.+++.+...|++|+++++.....+.  ....+.+....+++..+.+-++.
T Consensus       112 ~~l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~~~~~~~~~~~~~l~ell~~aDiV~lh~Plt~  179 (381)
T PRK00257        112 VDLAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPPRQEAEGDGDFVSLERILEECDVISLHTPLTK  179 (381)
T ss_pred             CCcCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCcccccccCccccCHHHHHhhCCEEEEeCcCCC
Confidence            4689999999998 669999999999999999998864321110  00112221124678888887765

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.86  E-value=0.066  Score=40.06  Aligned_cols=39  Identities=21%  Similarity=0.245  Sum_probs=32.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++|.| ++++|.+++..+...|++|+.+++++++.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~  201 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKAD  201 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHH
Confidence            478999999 799999998888889999999988755433

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.85  E-value=0.048  Score=41.18  Aligned_cols=90  Identities=23%  Similarity=0.213  Sum_probs=57.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchH-----HHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTD-----VKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~-----~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .++.||++-|.|. |.||+.+++++..-|++|+..++ .......     ....+......+++..+.+-+|++.  ..+
T Consensus       138 ~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT--~g~  214 (324)
T COG0111         138 TELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPET--RGL  214 (324)
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcch--hcc
Confidence            4688999999998 67999999999999999999998 3221111     0111222222468888888887653  223


Q ss_pred             HHHH-HhcCCCccEEEEccc
Q 044688           99 ASDF-TTKGLPLNILINNAG  117 (147)
Q Consensus        99 ~~~~-~~~~~~id~lv~~ag  117 (147)
                      +.+- ..+...--++||++-
T Consensus       215 i~~~~~a~MK~gailIN~aR  234 (324)
T COG0111         215 INAEELAKMKPGAILINAAR  234 (324)
T ss_pred             cCHHHHhhCCCCeEEEECCC
Confidence            3222 223323338888763

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.81  E-value=0.13  Score=38.61  Aligned_cols=35  Identities=34%  Similarity=0.522  Sum_probs=31.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .+.+++|.|+++++|..++......|++++.+..+
T Consensus       177 ~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~  211 (350)
T cd08274         177 AGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGA  211 (350)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCc
Confidence            47899999999999999999888899998887754

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=95.80  E-value=0.086  Score=40.32  Aligned_cols=39  Identities=21%  Similarity=0.191  Sum_probs=31.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   67 (147)
                      .+.+++|.| ++++|.+++..+...|+ +|+.++++.++.+
T Consensus       190 ~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~  229 (373)
T cd08299         190 PGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFA  229 (373)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence            467899996 58999999998888998 7999988765443

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.80  E-value=0.11  Score=39.05  Aligned_cols=79  Identities=16%  Similarity=0.199  Sum_probs=50.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++.|+|+ |++|.+++..|+.++.  .+++.+.+.+..+-...++....+ ......+..| .+.++           +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~-----------~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYED-----------L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhh-----------h
Confidence            35789999 9999999999987763  799999986655544444433211 0011122222 11111           2


Q ss_pred             CCccEEEEccccCCC
Q 044688          107 LPLNILINNAGIMAS  121 (147)
Q Consensus       107 ~~id~lv~~ag~~~~  121 (147)
                      ...|++|-.||....
T Consensus        68 ~~aDiVvitAG~prK   82 (313)
T COG0039          68 KGADIVVITAGVPRK   82 (313)
T ss_pred             cCCCEEEEeCCCCCC
Confidence            378999999998653

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=95.80  E-value=0.02  Score=34.92  Aligned_cols=40  Identities=15%  Similarity=0.264  Sum_probs=31.4

Q ss_pred             EEecCCCchhHHHHHHHHHCC---CEEEEE-EccCccchHHHHHH
Q 044688           33 IVTGASSGIGAETTRVLALRG---VHVFMA-VRNMAAGTDVKDAI   73 (147)
Q Consensus        33 litG~~~giG~~~a~~l~~~g---~~v~~~-~r~~~~~~~~~~~l   73 (147)
                      .|. |+|.+|.++++.|.+.|   .+|+++ .|++++.+++.++.
T Consensus         3 ~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~   46 (96)
T PF03807_consen    3 GII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY   46 (96)
T ss_dssp             EEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred             EEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence            344 67899999999999999   899855 88877766665543

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.80  E-value=0.029  Score=45.36  Aligned_cols=58  Identities=9%  Similarity=0.152  Sum_probs=41.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      ..++|.|. |.+|+.++++|.++|.++++++.++++.+++.+    .    ....+.+|.+|++.++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~----g~~~i~GD~~~~~~L~  475 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R----GIRAVLGNAANEEIMQ  475 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C----CCeEEEcCCCCHHHHH
Confidence            45667776 679999999999999999999998765444432    1    2445566666665443

>COG5322 Predicted dehydrogenase [General function prediction only]

Probab=95.79  E-value=0.017  Score=42.37  Aligned_cols=46  Identities=24%  Similarity=0.258  Sum_probs=39.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      .++...++-|.|++|.||.++++.|+.++....++.|+.+...+..
T Consensus       163 idlsqatvaivGa~G~Ia~~Iar~la~~~~~~~ll~r~aea~~rq~  208 (351)
T COG5322         163 IDLSQATVAIVGATGDIASAIARWLAPKVGVKELLLRDAEARNRQR  208 (351)
T ss_pred             cCHHHCeEEEecCCchHHHHHHHHhccccCEEEEecccHHhhhhhh
Confidence            4678899999999999999999999999999999998766544433

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.79  E-value=0.03  Score=41.70  Aligned_cols=39  Identities=31%  Similarity=0.390  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~   63 (147)
                      .++.||+++|.|-++-+|..+|..|++.|+.|.++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            468999999999999999999999999999999995 553

>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]

Probab=95.78  E-value=0.055  Score=42.69  Aligned_cols=35  Identities=31%  Similarity=0.460  Sum_probs=29.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN   62 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~   62 (147)
                      +.+.++|++|+ ||||-++-+.|+..|+ .|.+++.+
T Consensus        10 i~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlD   45 (603)
T KOG2013|consen   10 IKSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLD   45 (603)
T ss_pred             hccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEecc
Confidence            46788999987 7899999999999998 68887764

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.77  E-value=0.037  Score=38.68  Aligned_cols=37  Identities=24%  Similarity=0.261  Sum_probs=34.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      +++||.++|.|-+.-+|+.++..|.++|+.|++++.+
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~   95 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDIN   95 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecC
Confidence            7999999999999999999999999999999999643

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=95.76  E-value=0.041  Score=40.86  Aligned_cols=39  Identities=13%  Similarity=0.158  Sum_probs=33.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      .+.+++|.|+++.+|..++......|++|+.+.++.++.
T Consensus       140 ~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~  178 (327)
T PRK10754        140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKA  178 (327)
T ss_pred             CCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            578999999999999999888888899998888765543

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.04  Score=40.69  Aligned_cols=38  Identities=26%  Similarity=0.240  Sum_probs=34.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .+++||.++|.|.+.-+|+.++..|.++|+.|.++...
T Consensus       153 i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~  190 (281)
T PRK14183        153 IDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIF  190 (281)
T ss_pred             CCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC
Confidence            46899999999999999999999999999999987644

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
3rd5_A	291	Crystal Structure Of A Putative Uncharacterized Pro		2e-19
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		3e-07
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-06
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		5e-06
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		6e-06
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		6e-06
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		6e-06
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		6e-06
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		6e-06
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-06
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		6e-06
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		6e-06
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		1e-05
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		1e-05
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		1e-05
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-05
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		5e-05
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		5e-05
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-05
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		5e-05
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		5e-05
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		7e-05
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		8e-05
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		1e-04
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-04
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-04
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		2e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		3e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		5e-04
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		5e-04
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-04
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-04

>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein From Mycobacterium Paratuberculosis Length = 291

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/114 (46%), Positives = 70/114 (61%), Gaps = 9/114 (7%)
Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T ++TGA+SG+GA T R LA RG  V MAVR+   G    +A  + +   +V+V ELDL 
Sbjct: 18  TVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----EAAARTM-AGQVEVRELDLQ 72
Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
            L+SVR+FA   +      ++LINNAGIMA P+ L+ D  E Q  TNHLG   L
Sbjct: 73  DLSSVRRFADGVSGA----DVLINNAGIMAVPYALTVDGFESQIGTNHLGHFAL 122

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 31  TAIVTGASSGIGAETT--RVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           T ++TGAS+GIG  T    + A  G + + +A R +    ++K  I +E P AKV V +L
Sbjct: 35  TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQL 94
Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAG 117
           D++    ++ F  +   +   ++IL+NNAG
Sbjct: 95  DITQAEKIKPFIENLPQEFKDIDILVNNAG 124

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%)
Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+ GIG      L L+G  V +   N+ AG   K A+ ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65
Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++    +R            L+IL+NNAG+
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGV 96

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
           A+VTGAS GIG E    LA +G  V     + A+    +++  KE    K   L L++S 
Sbjct: 8   ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENS-XKE-KGFKARGLVLNISD 65
Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATN 137
           + S++ F ++   + L ++IL+NNAGI            E Q   N
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVIN 111

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAG 108

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 25  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 80
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 81  RSVPEIEALVAAVVERYGPVDVLVNNAG 108

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 29  ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 84
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 85  RSVPEIEALVAAVVERYGPVDVLVNNAG 112

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV--DVLELDL 89
           A+VTGA+SGIG E  R L   G+ VF+  R    G +     +KE+  A V  D    D+
Sbjct: 9   ALVTGATSGIGLEIARRLGKEGLRVFVCAR----GEEGLRTTLKELREAGVEADGRTCDV 64
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAG 117
            S+  +    +    +  P+++L+NNAG
Sbjct: 65  RSVPEIEALVAAVVERYGPVDVLVNNAG 92

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
           TG   ++TGAS GIGAE  + LA  G+ V++  R+ A   +V DA+  E+     K  V+
Sbjct: 28  TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNA---EVADALKNELEEKGYKAAVI 84
Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           + D +S +   +           L+ L+NNAG++
Sbjct: 85  KFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVV 118

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA-KVDVLEL 87
           G TA+VTG S GIG      LA  G  V+   RN     ++ D + +      KV+    
Sbjct: 8   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 64
Query: 88  DLSSLASVRKF----ASDFTTKGLPLNILINNAGIMASPFMLSKD----NIELQFATNHL 139
           DLSS +  ++     A+ F  K   LNIL+NNAGI+   +  +KD    +  L  + N  
Sbjct: 65  DLSSRSERQELMNTVANHFHGK---LNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFE 119
Query: 140 GSLHLHML 147
            + HL +L
Sbjct: 120 AAYHLSVL 127

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA-KVDVLEL 87
           G TA+VTG S GIG      LA  G  V+   RN     ++ D + +      KV+    
Sbjct: 9   GCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ---KELNDCLTQWRSKGFKVEASVC 65
Query: 88  DLSSLASVRKF----ASDFTTKGLPLNILINNAGIMASPFMLSKD----NIELQFATNHL 139
           DLSS +  ++     A+ F  K   LNIL+NNAGI+   +  +KD    +  L  + N  
Sbjct: 66  DLSSRSERQELMNTVANHFHGK---LNILVNNAGIVI--YKEAKDYTVEDYSLIMSINFE 120
Query: 140 GSLHLHML 147
            + HL +L
Sbjct: 121 AAYHLSVL 128

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ID TG T+++TGASSGIG+   R+L   G  V ++  N        +  +K +  A  D 
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSN--------EEKLKSLGNALKDN 61
Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             +++ +LA+ ++  S+  +K   L+IL+ NAGI
Sbjct: 62  YTIEVCNLAN-KEECSNLISKTSNLDILVCNAGI 94

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTG S GIG    + L   G  VF+  R+  A  D    +           +  D
Sbjct: 29  GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA---YGDCQAIPAD 85
Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAG 117
           LSS A  R+ A         L+IL+NNAG
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAG 114

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G   S+P  +  + +D  G  AIVTGA+ GIGA    V A  G HV +A+   +A  ++ 
Sbjct: 205 GADDSTPPADWEKPLD--GKVAIVTGAARGIGATIAEVFARDGAHV-VAIDVESAAENLA 261
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
           +   K   TA    L LD+++  +V K +       G   +IL+NNAGI     + + D+
Sbjct: 262 ETASKVGGTA----LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 317
Query: 130 IELQ--FATNHLGSLHL 144
                  A N L  L L
Sbjct: 318 ARWDAVLAVNLLAPLRL 334

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G   S+P  +  + +D  G  AIVTGA+ GIGA    V A  G HV +A+   +A  ++ 
Sbjct: 189 GADDSTPPADWEKPLD--GKVAIVTGAARGIGATIAEVFARDGAHV-VAIDVESAAENLA 245
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
           +   K   TA    L LD+++  +V K +       G   +IL+NNAGI     + + D+
Sbjct: 246 ETASKVGGTA----LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 301
Query: 130 IELQ--FATNHLGSLHL 144
                  A N L  L L
Sbjct: 302 ARWDAVLAVNLLAPLRL 318

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G   S+P  +  + +D  G  AIVTGA+ GIGA    V A  G HV +A+   +A  ++ 
Sbjct: 218 GADDSTPPADWEKPLD--GKVAIVTGAARGIGATIAEVFARDGAHV-VAIDVESAAENLA 274
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
           +   K   TA    L LD+++  +V K +       G   +IL+NNAGI     + + D+
Sbjct: 275 ETASKVGGTA----LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 330
Query: 130 IELQ--FATNHLGSLHL 144
                  A N L  L L
Sbjct: 331 ARWDAVLAVNLLAPLRL 347

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G   S+P  +  + +D  G  AIVTGA+ GIGA    V A  G HV +A+   +A  ++ 
Sbjct: 181 GADDSTPPADWEKPLD--GKVAIVTGAARGIGATIAEVFARDGAHV-VAIDVESAAENLA 237
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
           +   K   TA    L LD+++  +V K +       G   +IL+NNAGI     + + D+
Sbjct: 238 ETASKVGGTA----LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 293
Query: 130 IELQ--FATNHLGSLHL 144
                  A N L  L L
Sbjct: 294 ARWDAVLAVNLLAPLRL 310

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G   S+P  +  + +D  G  AIVTGA+ GIGA    V A  G HV +A+   +A  ++ 
Sbjct: 197 GADDSTPPADWEKPLD--GKVAIVTGAARGIGATIAEVFARDGAHV-VAIDVESAAENLA 253
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
           +   K   TA    L LD+++  +V K +       G   +IL+NNAGI     + + D+
Sbjct: 254 ETASKVGGTA----LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGITRDKLLANMDD 309
Query: 130 IELQ--FATNHLGSLHL 144
                  A N L  L L
Sbjct: 310 ARWDAVLAVNLLAPLRL 326

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD--VLELD 88
           +A+VTGAS GIG      LA  G +V +   N A   +  +A+V+EI    VD   ++ +
Sbjct: 12  SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 68
Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
           ++    V+    +  ++   L++L+NNAGI     ++
Sbjct: 69  VADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLM 105

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVR---NMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TA VTG SSGIG    R LA RG+ V+   R   N++A  D   A   ++  +  DV   
Sbjct: 26  TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAG 117
           D      V    +    +  P+ IL+N+AG
Sbjct: 86  D-----EVHAAVAAAVERFGPIGILVNSAG 110

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVD--VLELD 88
           +A+VTGAS GIG      LA  G +V +   N A   +  +A+V+EI    VD   ++ +
Sbjct: 6   SALVTGASRGIGRSIALQLAEEGYNVAV---NYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62
Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++    V+    +  ++   L++L+NNAGI
Sbjct: 63  VADADEVKAXIKEVVSQFGSLDVLVNNAGI 92

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 51/115 (44%), Gaps = 8/115 (6%)
Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLE--LDLS 90
           ++TGAS GIG    R L + G  + +  R  A      +AI  EI  A    L   LD++
Sbjct: 8   LITGASGGIGEGIARELGVAGAKILLGARRQAR----IEAIATEIRDAGGTALAQVLDVT 63
Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFMLSK-DNIELQFATNHLGSLH 143
              SV  FA         +++L+NNAG+M  SP    K D  E     N  G L 
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLW 118

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--DLS 90
           +VTG S GIGA   R+ A +G  V +   N AA  +  DA+V  I  +  + + +  D+ 
Sbjct: 30  LVTGGSRGIGAAVCRLAARQGWRVGV---NYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFML---SKDNIELQFATNHLGSL 142
           + A +    S    +   L+ L+NNAGI+  P  +   S + IE     N  GS+
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSI 141

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
           +G  A+VTGAS GIGA   R L   G  V +  R++    +   A+ +EI  A  + +  
Sbjct: 28  SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV----EKLRAVEREIVAAGGEAESH 83
Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             DLS   ++  FA+         ++L+NNAG+
Sbjct: 84  ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV 116

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 11  GFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK 70
           G + S+P  +  + +D  G  A+VTGA+ GIGA    V A  G  V +A+    A  D+K
Sbjct: 197 GAADSTPPADWDKPLD--GKVAVVTGAARGIGATIAEVFARDGATV-VAIDVDGAAEDLK 253
Query: 71  DAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLPLNILINNAGIMASPFMLSKDN 129
               K   TA    L LD+++  +V K  +  T   G  ++IL+NNAGI     + + D 
Sbjct: 254 RVADKVGGTA----LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDE 309

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
           +G + I+TG+S+GIG     + A  G  V +  RN     + K  I+K  +P  K++ + 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84
Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAG 117
            D++  +      +    K   ++IL+NNAG
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAG 115

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G TA++TG++ GIG          G  V +A  N+ A      A   EI  A    + LD
Sbjct: 5   GKTALITGSARGIGRAFAEAYVREGARVAIADINLEAAR----ATAAEIGPAAC-AIALD 59
Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHL 144
           ++  AS+ +  ++   +   ++IL+NNA +  +A    +++++ +  FA N  G+L +
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFM 117

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 20/119 (16%)
Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ++ +GL A+VTGA  GIG +T + L   G  V    R     +D+  ++ KE P   ++ 
Sbjct: 3   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRT---NSDLV-SLAKECP--GIEP 56
Query: 85  LELDLSSLASVRKFASDFTTKGL----PLNILINNAG-IMASPFM-LSKDNIELQFATN 137
           + +DL           D T K L    P+++L+NNA  ++  PF+ ++K+  +  F+ N
Sbjct: 57  VCVDLGDW--------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN 107

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--DL 89
           A+VTGA  GIG E  ++LA    HV    R   +     D++V EI +   +      D+
Sbjct: 47  ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----DSVVDEIKSFGYESSGYAGDV 102
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ 133
           S    + +  +   T+   ++IL+NNAGI      L   N E +
Sbjct: 103 SKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWE 146

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTG + GIG E  + L+  G+ V +  R++  G +  + + K      V   +LD++
Sbjct: 14  CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSNHENVVFHQLDVT 72
Query: 91  S-LASVRKFASDFTTKGLPLNILINNAGI 118
             +A++   A    T    L+IL+NNAG+
Sbjct: 73  DPIATMSSLADFIKTHFGKLDILVNNAGV 101

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 30  LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           +  +VTGA++G G   TR    +G  V    R      ++KD +   +  A     +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIA-----QLDV 55
Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGI---MASPFMLSKDNIELQFATNHLGSLHL 144
            + A++ +  +    +   ++IL+NNAG+   M      S ++ E    TN+ G +++
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYM 113

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 55/125 (44%), Gaps = 13/125 (10%)
Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVK---EIPTAKVDVL 85
           G  AI+TGA +GIG E     A  G  V ++  N  A   V D I +   +    + D+ 
Sbjct: 11  GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT 70
Query: 86  -ELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMA-SPFMLSKDNIELQFATNHLGSL 142
            E +LS+LA       DF    L  ++IL+NNAG     PF +   +    +  N     
Sbjct: 71  SEQELSALA-------DFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFF 123
Query: 143 HLHML 147
           HL  L
Sbjct: 124 HLSQL 128

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 39.3 bits (90), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIV----KEIPTAK 81
           D +G  A++TGAS+GIG +     A  G  V +A R+  A   V D I     K +P  +
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPI-R 87
Query: 82  VDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ 133
            DV + D      VR      T +   ++I + NAGI++   ML     E Q
Sbjct: 88  CDVTQPD-----QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQ 134

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-52
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	1e-39
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	5e-27
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	3e-20
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	9e-20
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-19
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-19
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-19
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	2e-19
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-19
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	8e-19
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	9e-19
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	1e-18
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	2e-18
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-18
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-18
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	1e-17
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-17
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-17
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-17
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	4e-17
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	5e-17
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	5e-17
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	1e-16
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-16
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	1e-16
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	3e-16
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-16
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-16
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	4e-16
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-16
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	8e-16
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	8e-16
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-15
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	3e-15
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-15
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	4e-15
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-15
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-15
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-15
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	6e-15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-14
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-14
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-14
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	2e-14
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	2e-14
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	3e-14
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-14
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-14
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	3e-14
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	3e-14
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	5e-14
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-14
3cxt_A	291	Dehydrogenase with different specificities; rossma	6e-14
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	6e-14
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	6e-14
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	6e-14
1xkq_A	280	Short-chain reductase family member (5D234); parra	7e-14
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	8e-14
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	8e-14
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-13
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-13
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	1e-13
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-13
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	1e-13
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	1e-13
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-13
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-13
1xq1_A	266	Putative tropinone reducatse; structural genomics,	1e-13
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-13
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-13
3imf_A	257	Short chain dehydrogenase; structural genomics, in	2e-13
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	2e-13
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	2e-13
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-13
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	2e-13
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-13
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	3e-13
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-13
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	3e-13
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	3e-13
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-13
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	3e-13
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-13
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	4e-13
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	4e-13
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-13
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	5e-13
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-13
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	5e-13
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	5e-13
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	6e-13
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	6e-13
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-13
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	7e-13
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-13
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	7e-13
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-13
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	8e-13
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	8e-13
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	9e-13
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-12
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-12
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-12
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-12
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-12
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-12
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-12
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	2e-12
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	2e-12
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-12
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-12
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-12
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	2e-12
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-12
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	2e-12
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-12
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	2e-12
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-12
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-12
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-12
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	4e-12
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-12
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	4e-12
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-12
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-12
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	5e-12
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	5e-12
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-12
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	6e-12
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-12
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	6e-12
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	7e-12
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	8e-12
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	9e-12
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-11
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-11
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	1e-11
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-11
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-11
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-11
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-11
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-11
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	2e-11
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	2e-11
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-11
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-11
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	4e-11
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	5e-11
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	5e-11
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	6e-11
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	7e-11
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	8e-11
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-10
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	1e-10
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	2e-10
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	2e-10
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	2e-10
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-10
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	3e-10
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	3e-10
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	4e-10
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	7e-10
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	9e-10
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	9e-10
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	2e-09
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-09
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	6e-09
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	7e-09
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-08
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	1e-08
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-08
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	4e-07
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	5e-07
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-06
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	3e-06
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-06
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-06
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	9e-06
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	9e-06
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-05
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	4e-05
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	4e-05
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	4e-05
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-04

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score =  166 bits (423), Expect = 2e-52
 Identities = 51/115 (44%), Positives = 66/115 (57%), Gaps = 9/115 (7%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
                T ++TGA+SG+GA T R LA RG  V MAVR+   G      +       +V+V 
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVR 67

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLG 140
           ELDL  L+SVR+FA   +      ++LINNAGIMA P+ L+ D  E Q  TNHLG
Sbjct: 68  ELDLQDLSSVRRFADGVS----GADVLINNAGIMAVPYALTVDGFESQIGTNHLG 118

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  133 bits (336), Expect = 1e-39
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 5/121 (4%)

Query: 27  ATGLTAIVTGASSGIGAETTRVLA-LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           +    A+VTG + GIG    R L  L    V +  R++  G      +  E         
Sbjct: 2   SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFH 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSK--DNIELQFATNHLGSLH 143
           +LD+  L S+R        +   L++L+NNAGI       +      E+   TN  G+  
Sbjct: 60  QLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRD 119

Query: 144 L 144
           +
Sbjct: 120 V 120

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  101 bits (253), Expect = 5e-27
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 19  EEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP 78
            E           A+VTG + GIG E  + L+  G+ V +  R++  G +  + + K   
Sbjct: 2   PETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL-KNSN 60

Query: 79  TAKVDVLELDLSS-LASVRKFASDFTTKGLPLNILINNAGIMASPF 123
              V   +LD++  +A++   A    T    L+IL+NNAG+     
Sbjct: 61  HENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSV 106

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 82.2 bits (204), Expect = 3e-20
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A++TGAS GIG    R LA  G  + +  R++     +   +++E    +V    LD+S
Sbjct: 4   VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHLDVS 62

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLH 143
              SV +F+     +   +++++ NAG+        LS++        N LG   
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWR 117

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 81.1 bits (201), Expect = 9e-20
 Identities = 31/115 (26%), Positives = 44/115 (38%), Gaps = 2/115 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLELDL 89
            AI+TGAS GIGA     LA  G  V +  R+      V D I++      +  VL LD+
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFMLSKDNIELQFATNHLGSLH 143
           +          D   K   ++IL+N A +          DN       N +    
Sbjct: 69  TDCTKADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYG 123

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 80.8 bits (200), Expect = 1e-19
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           + +VTGA+ GIG    + L       H+    R++   T+     +K I  ++V VL L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 89  LSSLASVRKFASDF--TTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLH 143
           ++   S+  F S          L++LINNAG++    +    ++  I  Q   N    + 
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 144 L 144
           L
Sbjct: 120 L 120

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 80.3 bits (199), Expect = 1e-19
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 7/119 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +    IVTGA SG+G   T  L  RG  V M  R               +    V  +  
Sbjct: 2   SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL----QQQELLLG-NAVIGIVA 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
           DL+    V    +     G    ++++ AG     P    + + I     +N + ++ +
Sbjct: 57  DLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILV 115

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 80.7 bits (200), Expect = 1e-19
 Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
             ++TGAS GIG    R L + G  + +  R         +AI  EI  A        LD
Sbjct: 6   VILITGASGGIGEGIARELGVAGAKILLGARR----QARIEAIATEIRDAGGTALAQVLD 61

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLH 143
           ++   SV  FA         +++L+NNAG+M  SP   +  D  E     N  G L 
Sbjct: 62  VTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLW 118

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 80.7 bits (200), Expect = 2e-19
 Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLEL 87
             T  +TGA+SG G    R  A  G  + +  R      +   A+  E+    +V  L L
Sbjct: 21  SSTLFITGATSGFGEACARRFAEAGWSLVLTGRR----EERLQALAGELSAKTRVLPLTL 76

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGSLHL 144
           D+   A++     +   +   L  LINNAG+     P      D+ +    TN  G L+ 
Sbjct: 77  DVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYS 136

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 78.7 bits (195), Expect = 6e-19
 Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 8/118 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
            A++TGASSGIG  T R LA  G  V +A R      +   A+  E+  A  KV VLELD
Sbjct: 9   VALITGASSGIGEATARALAAEGAAVAIAARR----VEKLRALGDELTAAGAKVHVLELD 64

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLHL 144
           ++    V    +        L+IL+NNAGIM   P       +      TN LG +++
Sbjct: 65  VADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYM 122

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 78.7 bits (195), Expect = 8e-19
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 8/118 (6%)

Query: 30  LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           +  +VTGA++G G   TR    +G  V    R      +    +  E+    + + +LD+
Sbjct: 1   MIVLVTGATAGFGECITRRFIQQGHKVIATGRR----QERLQELKDELG-DNLYIAQLDV 55

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGSLHL 144
            + A++ +  +    +   ++IL+NNAG+     P    S ++ E    TN+ G +++
Sbjct: 56  RNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYM 113

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 78.8 bits (195), Expect = 9e-19
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 2/115 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGAS GIGA   R L  +G+ V    R +    ++            +     DLS
Sbjct: 34  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLH 143
           +   +    S   ++   ++I INNAG+      +  S    +  F  N L    
Sbjct: 94  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 148

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 78.6 bits (194), Expect = 1e-18
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 11/122 (9%)

Query: 31  TAIVTGASSGIGAETTRVLAL---RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           + ++TG + G+G    + L        H+F   RN     +++D        + + +LE+
Sbjct: 23  SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNH---SNIHILEI 79

Query: 88  DLSSLASVRKFASDF--TTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSL 142
           DL +  +  K  +D    TK   LN+L NNAGI    A    +    +     TN +  +
Sbjct: 80  DLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPI 139

Query: 143 HL 144
            L
Sbjct: 140 ML 141

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 77.2 bits (191), Expect = 2e-18
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TGASSG+GAE  ++    G   ++  R+          +   + +  V     DL+
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRS----ESKLSTVTNCL-SNNVGYRARDLA 57

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
           S   V +      +     + ++++AG            + I+     N   ++++
Sbjct: 58  SHQEVEQLFEQLDSI---PSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINV 110

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 77.3 bits (191), Expect = 2e-18
 Identities = 28/121 (23%), Positives = 38/121 (31%), Gaps = 9/121 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
              T  V GA   IGAE  +  A  G  VF   RN          +V EI  A  ++   
Sbjct: 6   RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKL----APLVAEIEAAGGRIVAR 61

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLH 143
            LD  +   V  F +       PL + I N G     P +  +       +         
Sbjct: 62  SLDARNEDEVTAFLNAADAHA-PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFV 120

Query: 144 L 144
            
Sbjct: 121 S 121

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 76.9 bits (190), Expect = 5e-18
 Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
              T ++TGAS+GIG  T           + + +A R +    ++K  I +E P AKV V
Sbjct: 32  AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHV 91

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGS 141
            +LD++    ++ F  +   +   ++IL+NNAG    +     ++ ++I+  F TN    
Sbjct: 92  AQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTAL 151

Query: 142 LHL 144
           +++
Sbjct: 152 INI 154

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 1/105 (0%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
            D +   A+VTG SSGIG  T  +L   G  V    R+       + A+ +  P A++  
Sbjct: 4   YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFA 63

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKD 128
              D+     VR FA          +IL+NNAG    S F  + D
Sbjct: 64  SVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRVSTFAETTD 108

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 75.8 bits (187), Expect = 2e-17
 Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 3/119 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   IVTGAS GIG E    LA  G HV +  R+      V      E+  A    +  
Sbjct: 27  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC-LELGAASAHYIAG 85

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
            +  +    +F +        L++LI N               ++      N L  + L
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 144

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 75.5 bits (186), Expect = 2e-17
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 2/118 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA VTG ++G+G    R L  +G  V +A     +       +  E    +V  ++L
Sbjct: 7   AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLH 143
           D++S    +  A +   +  P++IL NNAG+     +   S D+ +     N  G ++
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVN 124

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 73.7 bits (182), Expect = 3e-17
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 17/122 (13%)

Query: 30  LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
           +  ++TGA+ G+G    R  AL+G  + ++ R   A  ++   +           L  DL
Sbjct: 1   MRVLITGATGGLGGAFAR--ALKGHDLLLSGRRAGALAELAREV-------GARALPADL 51

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLHL--H 145
           +     +    +      PL++L++  G    +      +D +E   A + L +  +  H
Sbjct: 52  ADELEAKALLEEAG----PLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKH 107

Query: 146 ML 147
             
Sbjct: 108 AR 109

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 73.7 bits (182), Expect = 4e-17
 Identities = 29/116 (25%), Positives = 46/116 (39%), Gaps = 8/116 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TGAS GIG  T R+L  +G  V +  R+         A+  E+       L  D+ 
Sbjct: 7   AVLITGASRGIGEATARLLHAKGYRVGLMARD----EKRLQALAAELE--GALPLPGDVR 60

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
                 +  +        L+ L+NNAG+    P   L+ +   L   TN  G+   
Sbjct: 61  EEGDWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLG 116

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 73.7 bits (182), Expect = 5e-17
 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 11/119 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               A+VTGA+ G+G E  + L+   +   +         +   A+ +      V+ +E 
Sbjct: 4   KKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRN-----PEHLAALAEIE---GVEPIES 55

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
           D+                   ++ L++ A +   +     S          N +    L
Sbjct: 56  DIVKEVLEEGGVDKLKNLD-HVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAEL 113

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 73.9 bits (182), Expect = 5e-17
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 12/129 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLA---LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
                ++TGAS G G      LA     G  + ++ R+ +    +K+ +  + P  KV +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  LELDLSSLASVRKFASD----FTTKGLPLNILINNAGIMASPFMLSKDNIELQ-----FA 135
              DL + A V++  S        +GL   +LINNA  +        +  +L      +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNHLGSLHL 144
            N    L L
Sbjct: 125 LNLTSMLCL 133

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 73.4 bits (181), Expect = 1e-16
 Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 6/123 (4%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
             TG   ++TGA  GIG  T    A     + +   N     +           AKV   
Sbjct: 28  SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTF 85

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLH 143
            +D S+   +   A     +   ++IL+NNAG++  S         IE  F  N L   H
Sbjct: 86  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLA--H 143

Query: 144 LHM 146
              
Sbjct: 144 FWT 146

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 73.0 bits (180), Expect = 1e-16
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 4/118 (3%)

Query: 8   GPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT 67
           GP   + +         +   G  A++TGA+ GIGA+  R  A  G  + ++ R+++   
Sbjct: 1   GPGSMTTTDDR--YAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELD 58

Query: 68  DVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM 124
             + A+ ++     V  + +DL+   +  + A         L++L+NNAGI    P +
Sbjct: 59  AARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHPQPVV 115

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 73.0 bits (180), Expect = 1e-16
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VT  SSG+G  +   LA  G  + +  RN          I   +  A+VD++  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLHL 144
           D+     + +        G   +IL+ + G      FM L  ++ +  +      ++ +
Sbjct: 66  DIREPGDIDRLFEKARDLG-GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWV 123

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 72.2 bits (178), Expect = 3e-16
 Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 8/120 (6%)

Query: 13  SASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA 72
           S+    ++       +G  A+VTGAS GIGA   R L   G  V +  R++        A
Sbjct: 13  SSGHIDDDDKHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKL----RA 68

Query: 73  IVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKD 128
           + +EI  A  + +    DLS   ++  FA+         ++L+NNAG+     P    K 
Sbjct: 69  VEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKP 128

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 72.9 bits (179), Expect = 3e-16
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDVLEL 87
             ++TGASSG G  T   LA  G  V+ ++R++          +          +  LEL
Sbjct: 7   IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHL 144
           D+ S  SV +       +   +++LI+NAG M        + +     +  N L +  +
Sbjct: 67  DVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 71.9 bits (177), Expect = 4e-16
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 10/116 (8%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TGASSGIG    R  +  G  + +  R +          +K +        ++D++
Sbjct: 18  LVVITGASSGIGEAIARRFSEEGHPLLLLARRVER--------LKALNLPNTLCAQVDVT 69

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
              +     +       P + ++NNAG+M          +  +  F  N LG L+ 
Sbjct: 70  DKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNG 125

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 71.9 bits (177), Expect = 4e-16
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 13  SASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA 72
            +S      +         A+VTGA+SGIG E  R L   G+ VF+  R           
Sbjct: 6   HSSGLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL----RT 61

Query: 73  IVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +KE+  A  + D    D+ S+  +    +    +  P+++L+NNAG 
Sbjct: 62  TLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR 109

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 71.0 bits (175), Expect = 6e-16
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TG TA+VTG++ G+G      LA  G  V +         +  D + ++        +  
Sbjct: 8   TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAF 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++   ++    S    +G+ ++ILINNAGI
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGI 96

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 71.0 bits (175), Expect = 8e-16
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 3/119 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +G  A++TG+SSGIG       A  G H+ +  R +    +   ++ ++    +V  + +
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFG-VRVLEVAV 64

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLHL 144
           D+++   V        +     +IL+NNAG       M  + +  +  +    + ++ L
Sbjct: 65  DVATPEGVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRL 123

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 70.7 bits (174), Expect = 8e-16
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 5/105 (4%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           +   G TA+VTG+++GIG      L   G +V +  R      +    I  + P A +  
Sbjct: 6   MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQP 65

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFMLSKD 128
           +  DL +    +     +      ++ILINN GI     +    D
Sbjct: 66  VVADLGTEQGCQDVIEKYPK----VDILINNLGIFEPVEYFDIPD 106

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 69.0 bits (170), Expect = 3e-15
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +GL A+VTGA  GIG +T + L   G  V    R  +    +            ++ + +
Sbjct: 6   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCV 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
           DL    +  K          P+++L+NNA ++   PF+ ++K+  +  F+ N
Sbjct: 60  DLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN 107

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 69.7 bits (171), Expect = 3e-15
 Identities = 30/120 (25%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 31  TAIVTGASSGIGAETTRVLA---LRGVHVFMAVRNMAAGTDVKD-AIVKEIPTAKVDVLE 86
             ++TG SSGIG      LA    +   V+  +R++     + + A     P   ++ L+
Sbjct: 4   VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPF-MLSKDNIELQFATNHLGSLHL 144
           LD+    SV   A +  T+G  +++L+ NAG+ +  P   L +D +      N +G++ +
Sbjct: 64  LDVRDSKSVAA-ARERVTEG-RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
              TA VTG SSGIG    R LA RG+ V+   R+    +   D +        VD    
Sbjct: 23  RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSC 80

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++S   V    +    +  P+ IL+N+AG 
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGR 111

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 68.8 bits (169), Expect = 4e-15
 Identities = 28/92 (30%), Positives = 44/92 (47%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+ GIG      L L+G  V +   N+ AG   K A+ ++    K   ++ 
Sbjct: 6   NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQC 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D++    +R            L+IL+NNAG+ 
Sbjct: 66  DVADQQQLRDTFRKVVDHFGRLDILVNNAGVN 97

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 68.3 bits (168), Expect = 5e-15
 Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGA  GIG  T + L   G  V    R  A    +            ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCV 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
           DL    +  +          P+++L+NNA +    PF+ ++K+  +  F  N
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN 107

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 68.8 bits (169), Expect = 5e-15
 Identities = 21/91 (23%), Positives = 39/91 (42%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
              TA++TG++SGIG    R LA  G ++ +               V  + +  V     
Sbjct: 24  MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPA 83

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++  + +    +    +    +IL+NNAG+
Sbjct: 84  DMTKPSEIADMMAMVADRFGGADILVNNAGV 114

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 68.4 bits (168), Expect = 6e-15
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                IVTGASSG+GA  TR+LA  G  V        AG +    +   +     DV   
Sbjct: 6   KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADV--- 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKD 128
             ++ A      +    +   ++ L+N AG      +L + 
Sbjct: 63  --TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRS 101

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 68.0 bits (167), Expect = 6e-15
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHV---FMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
             ++TGA  GIG       A    H       +   +      + I  E        D +
Sbjct: 4   ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLH 143
             D+S +A VR+  +    +   ++ L+NNAG+        L++++ +    TN  G+  
Sbjct: 64  TADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 123

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  AIV G + G+G  T R L   G  V +  RN +        I +E    +V  L  
Sbjct: 7   QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNI----ARIREEFG-PRVHALRS 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATN 137
           D++ L  +    +        +++L  NAG+    PF  +S+ + + QFA N
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVN 113

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 67.6 bits (166), Expect = 1e-14
 Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 3/93 (3%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
              G  A+VTG S GIG    + L   G  VF+  R+  A  D    +           +
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY---GDCQAI 82

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             DLSS A  R+ A         L+IL+NNAG 
Sbjct: 83  PADLSSEAGARRLAQALGELSARLDILVNNAGT 115

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 67.6 bits (166), Expect = 2e-14
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 3/114 (2%)

Query: 7   KGPSGFSASSPAEEVTQGI--DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA 64
           +GP        AE   + +  D +  + +VTG + GIG     V A  G +V +A R+  
Sbjct: 17  QGPGSMLVVESAEPAERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPR 76

Query: 65  AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             + V   + +      V  + LD+S   S    A         L+++  NAGI
Sbjct: 77  ELSSVTAELGELGA-GNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGI 129

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             ++TG  SG+G  T   LA  G  + +   +       K A+++  P A+V     D+S
Sbjct: 15  VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIM 119
             A V  +    TT+    ++   NNAGI 
Sbjct: 75  DEAQVEAYV-TATTERFGRIDGFFNNAGIE 103

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 66.5 bits (163), Expect = 2e-14
 Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 6/119 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G   +VTG S GIG     VL          V  +A        + ++    +   +  D
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDT--VVYGVARSEAPLKKLKEKYG-DRFFYVVGD 58

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMA--SPFM-LSKDNIELQFATNHLGSLHL 144
           ++  + +++  +        ++ L+ NAG++        +  +  +  +  N    + L
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSL 117

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 5/91 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A VTGA SGIG E  R  A  G  + +  R  AA         +E+  A    +  
Sbjct: 10  DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA----AQELGAAVAARIVA 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++   ++   A++      P++IL+N+AGI
Sbjct: 66  DVTDAEAMTAAAAEAEAVA-PVSILVNSAGI 95

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI-----VKEIPTAKV 82
               A+VTGA SGIG   +  LA  G  V     + AA  +    +      +  P    
Sbjct: 6   RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNH 65

Query: 83  DVLELDLSSLASVRKFASDFTTK-GLPLNILINNAGI 118
              + D+S   + R            P +++++ AGI
Sbjct: 66  AAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI 102

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 1/92 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
               AI+TG+S+GIG  T  + A  G  V +  R+     + +  I+   +    V+ + 
Sbjct: 5   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 64

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            D+++ A   +  S    K   L+IL+NNAG 
Sbjct: 65  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGA 96

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 66.5 bits (163), Expect = 3e-14
 Identities = 29/91 (31%), Positives = 43/91 (47%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG++SGIG      LA +G  + +     AA  +   A +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           DLS   +VR    +   +   ++IL+NNAGI
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNNAGI 93

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 66.4 bits (163), Expect = 3e-14
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           +      A+VTGAS GIG E    LA +G  V     + A+    ++++ ++   A+   
Sbjct: 1   MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKAR--G 58

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           L L++S + S++ F ++   + L ++IL+NNAGI
Sbjct: 59  LVLNISDIESIQNFFAEIKAENLAIDILVNNAGI 92

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 66.1 bits (162), Expect = 5e-14
 Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 4/101 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDV 84
            G  AIVTG ++GIG    + L   G +V +A R +       D +   +P     +V  
Sbjct: 17  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 76

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM 124
           ++ ++ +   V             +N L+NN G    SP  
Sbjct: 77  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAE 117

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 66.2 bits (162), Expect = 6e-14
 Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 4/118 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG +SGIG  T    A RG  + ++  +  A     + +  +        +  
Sbjct: 30  DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVC 87

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLH 143
           D+  L  + + A +       ++++ +NAGI+ +  +  ++ D+       +  GS+H
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 145

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 65.7 bits (161), Expect = 6e-14
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
                 AIVTGA SG+G      LA  G  V +A R + A          EI       +
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL----QETAAEIG-DDALCV 79

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
             D++   SVR   +    K   +++L NNAG  A
Sbjct: 80  PTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGA 114

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 65.6 bits (161), Expect = 6e-14
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +G  A++TGAS+GIG +     A  G  V +A R+  A   V D I       K   +  
Sbjct: 31  SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRC 88

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++    VR      T +   ++I + NAGI
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGI 119

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 66.1 bits (162), Expect = 6e-14
 Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 2/98 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A +TG  +G+G   T +L+  G    +A R M       + I  +    KV  ++ 
Sbjct: 25  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 83

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM 124
           D+     V+   S+        NI+INNA     SP  
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTE 121

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 65.7 bits (161), Expect = 7e-14
 Identities = 22/92 (23%), Positives = 47/92 (51%), Gaps = 1/92 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
           +  T I+TG+S+GIG  T  + A  G +V +  R+     + +  I+K  +   +V+ + 
Sbjct: 5   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 64

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            D+++     +  +    +   +++L+NNAG 
Sbjct: 65  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGA 96

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 65.4 bits (160), Expect = 8e-14
 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G +AIV+G + G+G  T R L   G+ V +A      G  + D +         +V   
Sbjct: 29  EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNV--- 85

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDN 129
             +S  SV          G     ++ + G   +  ++ +D 
Sbjct: 86  --TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDG 125

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score = 66.2 bits (162), Expect = 8e-14
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 12/95 (12%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV---KDAIVKEIPTAKVDV 84
            G  A+VTGA+ GIGA    V A  G  V           DV    + + +         
Sbjct: 212 DGKVAVVTGAARGIGATIAEVFARDGATV--------VAIDVDGAAEDLKRVADKVGGTA 263

Query: 85  LELDLSSLASVRKFASDFTTK-GLPLNILINNAGI 118
           L LD+++  +V K  +  T   G  ++IL+NNAGI
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI 298

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 65.3 bits (160), Expect = 1e-13
 Identities = 29/116 (25%), Positives = 41/116 (35%), Gaps = 6/116 (5%)

Query: 5   NRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA 64
           +     G   +      +         AIVTGAS GIG      LA RG  V       A
Sbjct: 4   HHHHHMGTLEAQTQGPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEA 63

Query: 65  AGTDVKDAIVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
                 + I      A  +     L+++   +V         +   LN+L+NNAGI
Sbjct: 64  GA----EGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI 115

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 64.8 bits (159), Expect = 1e-13
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   I+T A+ GIG       A  G  V     N +   +++           +    L
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP-------GIQTRVL 57

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D++    + +FA++       L++L N AG +
Sbjct: 58  DVTKKKQIDQFANEV---E-RLDVLFNVAGFV 85

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 65.0 bits (159), Expect = 1e-13
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 5/90 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           GL A++TG +SG+G  T   L  +G    +     + G      +      A  DV    
Sbjct: 12  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV---- 67

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +S   V+   +    K   +++ +N AGI
Sbjct: 68  -TSEKDVQTALALAKGKFGRVDVAVNCAGI 96

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 65.3 bits (160), Expect = 1e-13
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 1/108 (0%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
           +G + I+TG+S+GIG     + A  G  V +  RN     + K  I+K  +P  K++ + 
Sbjct: 25  SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 84

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQF 134
            D++  +      +    K   ++IL+NNAG   +    + D     +
Sbjct: 85  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELY 132

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 8/118 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
             +VTG S GIGA   R+ A +G  V     N AA  +  DA+V  I  +  +   +  D
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRV---GVNYAANREAADAVVAAITESGGEAVAIPGD 84

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGSLH 143
           + + A +    S    +   L+ L+NNAGI+        +S + IE     N  GS+ 
Sbjct: 85  VGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSIL 142

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               A+VTGA  GIG E  ++LA    HV    R   +     D++V EI +   +    
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSC----DSVVDEIKSFGYESSGY 98

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             D+S    + +  +   T+   ++IL+NNAGI
Sbjct: 99  AGDVSKKEEISEVINKILTEHKNVDILVNNAGI 131

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G TA+VTG++SGIG    +VLA  G ++      +  G       + EI     K    
Sbjct: 3   KGKTALVTGSTSGIGLGIAQVLARAGANI------VLNGFGDPAPALAEIARHGVKAVHH 56

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             DLS +A +    +    +   ++IL+NNAGI
Sbjct: 57  PADLSDVAQIEALFALAEREFGGVDILVNNAGI 89

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 64.9 bits (159), Expect = 1e-13
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A++TGA+SGIG    +     G  VF+  R         DA + EI       ++ D +
Sbjct: 31  IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVL----DAAIAEIG-GGAVGIQADSA 85

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLH 143
           +LA + +       +   +++L  NAG     P   ++++  +  F  N  G L 
Sbjct: 86  NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLF 140

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 64.8 bits (159), Expect = 1e-13
 Identities = 23/94 (24%), Positives = 33/94 (35%), Gaps = 7/94 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
              T +VTG + GIG       A  G  +    RN        +  + +      +V   
Sbjct: 13  KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYEL----NECLSKWQKKGFQVTGS 68

Query: 86  ELDLSSLASVRKFASDFTTK-GLPLNILINNAGI 118
             D S      K     ++  G  L+ILINN G 
Sbjct: 69  VCDASLRPEREKLMQTVSSMFGGKLDILINNLGA 102

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG S G+G    + LA  G  V +A RN+   ++    + ++    +      
Sbjct: 20  RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAFRC 78

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S+   V+K       K   L+ ++N AGI
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI 109

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KV 82
           +   G TAIVTG+S G+G      L   G ++   V N +  +   DA  +E   A   V
Sbjct: 1   MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANI---VLNGSPASTSLDATAEEFKAAGINV 57

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            V + D+ +   V             ++IL+NNAGI
Sbjct: 58  VVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI 93

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                I+TG SSG+G       A  G  V +  R      + K  I +     ++  +++
Sbjct: 5   KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQM 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+ +   ++K       K   ++ILINNA  
Sbjct: 63  DVRNTDDIQKMIEQIDEKFGRIDILINNAAG 93

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G + +VTG + GIG     V A  G +V +A R+ A        + +     KV  ++ 
Sbjct: 9   QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGS-GKVIGVQT 67

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S  A     A     +   ++++  NAG+
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGV 98

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               AIVTG +  IG      LA  G  V +A  + A  T   + +  E     V  + +
Sbjct: 12  DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVM 69

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+++  SV+        +   ++IL+  AGI
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGI 100

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 64.6 bits (158), Expect = 2e-13
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 7/134 (5%)

Query: 8   GPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT 67
                  + P     Q     G  A+VTGA  GIG E    L  RG  V   + N A  T
Sbjct: 8   RGESKYDAIPGPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKV---IVNYANST 64

Query: 68  DVKDAIVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM 124
           +  + +V  I         ++ ++  +  + +   +       L+I+ +N+G+++     
Sbjct: 65  ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVK 124

Query: 125 -LSKDNIELQFATN 137
            ++ +  +  F  N
Sbjct: 125 DVTPEEFDRVFTIN 138

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score = 64.5 bits (158), Expect = 2e-13
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 5   NRKGPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA 64
           +       S   P       +  T   A+VTGAS GIG      LA  G  V     N A
Sbjct: 4   SHHHHHHSSGLVPRGSHMTALPLTDRIALVTGASRGIGRAIALELAAAGAKV---AVNYA 60

Query: 65  AGTDVKDAIVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +     D +V  I  A  +   ++ D+S  + V    +    +   L++L+NNAGI
Sbjct: 61  SSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGI 116

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 63.7 bits (156), Expect = 2e-13
 Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 1/93 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
            G   +VTGA+ GIGA   R  A  G  V +  R  A+  +V D I     P   +  L 
Sbjct: 13  KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALN 72

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           L+ ++    R+ A+    +   L+ L++NA I+
Sbjct: 73  LENATAQQYRELAARVEHEFGRLDGLLHNASII 105

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDL 89
             +VTGAS GIG E     A  G  V +  RN      V   I +E     +  +L+L  
Sbjct: 14  IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIM 119
            +  + ++ A         L+ +++NAG++
Sbjct: 74  CTSENCQQLAQRIAVNYPRLDGVLHNAGLL 103

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 63.8 bits (156), Expect = 3e-13
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 1/93 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG  +G+G    + L+  G  V +  R           I        V  +  
Sbjct: 32  EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG-NIVRAVVC 90

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
           D+     V    +    +   L++L+NNAG   
Sbjct: 91  DVGDPDQVAALFAAVRAEFARLDLLVNNAGSNV 123

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA+VTG S GIG      LA  G  V+   RN     +  +   ++     V+    
Sbjct: 20  KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVC 77

Query: 88  DLSSLASVRKFASDFTTK-GLPLNILINNAGI 118
           DL S     K            LNIL+NNAG+
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV 109

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ++  G  A+VTGAS GIG     +LA RG  V     + +    + D +           
Sbjct: 5   MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL-----GDNGKG 59

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           + L++++  S+       T +   ++IL+NNAGI
Sbjct: 60  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGI 93

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA- 80
            Q +  T   AIVTGAS GIGA     LA  G  V   V N A      + +  +I  A 
Sbjct: 20  FQSMMETNKVAIVTGASRGIGAAIAARLASDGFTV---VINYAGKAAAAEEVAGKIEAAG 76

Query: 81  -KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
            K    + D+S  A+VR+  +        +++L+NNAGIM  +          +   A N
Sbjct: 77  GKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVN 136

Query: 138 HLGSLHL 144
             G+ + 
Sbjct: 137 LKGTFNT 143

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score = 63.7 bits (156), Expect = 3e-13
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
           +   A VTG   GIG    + L   G  V   V      +  +   +++           
Sbjct: 12  SQRIAYVTGGMGGIGTSICQRLHKDGFRV---VAGCGPNSPRRVKWLEDQKALGFDFYAS 68

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           E ++    S ++       +   +++L+NNAGI
Sbjct: 69  EGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI 101

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               A+VTG+S G+G      LA  G ++   V N A          +EI     KV V+
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNI---VINYARSKKAALETAEEIEKLGVKVLVV 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLH 143
           + ++   A +++           L++ +NNA      P M L + + +     N    L 
Sbjct: 60  KANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLF 119

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA+VTG S GIG      LA  G  V+   RN     D       +    KV+    
Sbjct: 8   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVC 65

Query: 88  DLSSLASVRKFASDFTTKGL-PLNILINNAGI 118
           DLSS +  ++  +         LNIL+NNAGI
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGI 97

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score = 63.3 bits (155), Expect = 4e-13
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 5/93 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  A+VTGAS GIG      LA +G +V   V N A      + +V EI         +
Sbjct: 3   KGKVALVTGASRGIGRAIAIDLAKQGANV---VVNYAGNEQKANEVVDEIKKLGSDAIAV 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             D+++   V             ++IL+NNAG+
Sbjct: 60  RADVANAEDVTNMVKQTVDVFGQVDILVNNAGV 92

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 63.3 bits (155), Expect = 5e-13
 Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                IVTG  SGIG  T  + A  G +V +A  N  A   V      EI  +K   + +
Sbjct: 26  NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRV----ANEIG-SKAFGVRV 80

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+SS           T K   +++L+NNAG 
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGF 111

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 63.4 bits (155), Expect = 5e-13
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 7/116 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +VTGASSG G          G  V    R   A  D+  A        + + + LD++
Sbjct: 7   VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVT 61

Query: 91  SLASVRKFASDFTTKGLPLNILINNAG-IMASPF-MLSKDNIELQFATNHLGSLHL 144
               +   A+D   +   +++L+NNAG      F   ++  +   F  +  G   L
Sbjct: 62  DGERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARL 117

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 63.0 bits (154), Expect = 5e-13
 Identities = 27/133 (20%), Positives = 45/133 (33%), Gaps = 8/133 (6%)

Query: 13  SASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA 72
           S+          +  +    ++TGAS  +G      L   G  V ++ R   A       
Sbjct: 11  SSGRENLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHAS------ 64

Query: 73  IVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKDNIE 131
            V E+  A    L  D S    +  F     T+   L  +++NA   +A       DN  
Sbjct: 65  -VTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFT 123

Query: 132 LQFATNHLGSLHL 144
             F+ + L    +
Sbjct: 124 RMFSVHMLAPYLI 136

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score = 62.9 bits (154), Expect = 5e-13
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           I   G  ++VTG++ GIG      LA  G  V +   +      V + I  +    K   
Sbjct: 3   IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYG-VKAHG 61

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +E++L S  S+ K   +       ++IL+NNAGI
Sbjct: 62  VEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI 95

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 63.4 bits (155), Expect = 5e-13
 Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 9/141 (6%)

Query: 8   GPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT 67
            PS    SS   + ++ +   G  A+ TGA  GIG      L  RG  V   V N  + +
Sbjct: 2   APSADITSSGPSDASKPL--AGKVALTTGAGRGIGRGIAIELGRRGASV---VVNYGSSS 56

Query: 68  DVKDAIVKEIPTA--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM 124
              + +V E+     +   ++ D+S  + V        +    L+ +++N+G+      +
Sbjct: 57  KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDEL 116

Query: 125 -LSKDNIELQFATNHLGSLHL 144
            ++++  +  F  N  G   +
Sbjct: 117 EVTQELFDKVFNLNTRGQFFV 137

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 62.9 bits (154), Expect = 6e-13
 Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                IVTG+  GIG      LA  G  V +A  N  A   V   IV +        + +
Sbjct: 8   ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAV 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S   S +  A     +   ++ L+NNA I
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAI 96

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 62.9 bits (154), Expect = 6e-13
 Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  A+VTGAS GIG    + LA  G  V     +     +  +  V EI +       +
Sbjct: 6   KGKVALVTGASRGIGRAIAKRLANDGALV---AIHYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 86  ELDLSSLASVRKFASDFTTKGLP------LNILINNAGIMA-SPFM-LSKDNIELQFATN 137
             +L SL  V    S    +          +ILINNAGI   +     ++   +   + N
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVN 122

Query: 138 HLGSLHL 144
                 +
Sbjct: 123 AKAPFFI 129

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 62.9 bits (154), Expect = 6e-13
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 8   GPSGFSASSPAEEVTQGIDATGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNMAAG 66
           GP   + S   +E+       G   +VT A+ +GIG+ T R   L G  V ++  +    
Sbjct: 1   GPGSMNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRL 60

Query: 67  TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            + +D +  ++   +V+ +  D++S  +V    +    K   L++L+NNAG+
Sbjct: 61  GETRDQL-ADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL 111

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score = 63.0 bits (154), Expect = 7e-13
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               A VTG   G+GA  +R L   G+ V     + +   D     +     A       
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAV---AVSHSERNDHVSTWLMHERDAGRDFKAY 80

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +D++   S  + A         +++LINNAGI
Sbjct: 81  AVDVADFESCERCAEKVLADFGKVDVLINNAGI 113

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score = 62.5 bits (153), Expect = 7e-13
 Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
              +A+VTGAS GIG      LA  G +V     N A   +  +A+V+EI         +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNV---AVNYAGSKEKAEAVVEEIKAKGVDSFAI 59

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           + +++    V+    +  ++   L++L+NNAGI
Sbjct: 60  QANVADADEVKAMIKEVVSQFGSLDVLVNNAGI 92

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 62.6 bits (153), Expect = 7e-13
 Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 5/94 (5%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
              TG  A+VTGA+ GIG    R    +G  V +         ++   +        V V
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFV 77

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
              +LS   S+++ A     +   ++IL+NNAGI
Sbjct: 78  FSANLSDRKSIKQLAEVAEREMEGIDILVNNAGI 111

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 62.5 bits (153), Expect = 7e-13
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 9/94 (9%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ID TG T+++TGASSGIG+   R+L   G  V ++  N      + +A+          +
Sbjct: 10  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTI 64

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
              +L++        S  +     L+IL+ NAGI
Sbjct: 65  EVCNLANKEECSNLISKTSN----LDILVCNAGI 94

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 62.6 bits (153), Expect = 8e-13
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA+VTGA SGIG       A  G HV    R      +V D I         + +  
Sbjct: 30  AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVA 86

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           DL+ L      A +       +++L+NNAGI
Sbjct: 87  DLADLEGAANVAEELAATR-RVDVLVNNAGI 116

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 62.5 bits (153), Expect = 8e-13
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGA  GIG      L   G  V +A  N A    V   I +    A    +++D+S
Sbjct: 4   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAV--AVKVDVS 61

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLH 143
               V              ++++NNAG+  ++P   ++ + ++  +  N  G + 
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIW 116

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 62.5 bits (153), Expect = 9e-13
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             IVTGA SGIG    +  AL    V            +   +       +V  ++ D+S
Sbjct: 9   VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVS 66

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM 119
               V +F          +++L NNAGIM
Sbjct: 67  KKKDVEEFVRRTFETYSRIDVLCNNAGIM 95

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 61.9 bits (151), Expect = 1e-12
 Identities = 13/132 (9%), Positives = 33/132 (25%), Gaps = 17/132 (12%)

Query: 15  SSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIV 74
              +  +           +V G S  +GAE  +    +  +            D      
Sbjct: 8   HHHSSGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH----- 62

Query: 75  KEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSK---DNIE 131
                       +  S    ++       +K + ++  +  AG  +     S     +++
Sbjct: 63  ---------SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVK 113

Query: 132 LQFATNHLGSLH 143
                N   +  
Sbjct: 114 GMIDMNLYSAFA 125

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 62.3 bits (152), Expect = 1e-12
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 1/91 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               A +TG  SGIG     +    G H  +A R++         +       +   L +
Sbjct: 26  RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATG-RRCLPLSM 84

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+ +  +V         +   ++ILIN A  
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAG 115

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G TA VTG S GIGA   + LAL G  V  A+       +   A+V EI  A  +   +
Sbjct: 30  AGKTAFVTGGSRGIGAAIAKRLALEGAAV--AL-TYVNAAERAQAVVSEIEQAGGRAVAI 86

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
             D     ++ +   +       L+IL+N+AGI   +P    +  + +   A N
Sbjct: 87  RADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVN 140

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 5/120 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           T    +++G    +G    R  A +G  + +A R +    DV   +       +   +  
Sbjct: 10  TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGT 67

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGSLHL 144
           D++  A V     +       ++++INNA  +    PF   + +++         G+L L
Sbjct: 68  DITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRL 127

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 28/113 (24%), Positives = 42/113 (37%), Gaps = 7/113 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               AIVTGA++GIG       A  G  V +            +A+   I  A  K   L
Sbjct: 11  NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGA----EAVAAAIRQAGGKAIGL 66

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKDNIELQFATN 137
           E +++              +   + +L+NNAG     PF +   + E  F  N
Sbjct: 67  ECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLN 119

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 61.7 bits (151), Expect = 2e-12
 Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AIVTGASSG G         RG  V     +     +            KV  +  D++
Sbjct: 4   VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVA 62

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIM 119
               V       T +    +++L+NNAGI 
Sbjct: 63  DEGDVNAAI-AATMEQFGAIDVLVNNAGIT 91

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 3/94 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA-KVDVLE 86
              T +VTG  SGIG      L   G  V +  RN          +         +    
Sbjct: 10  QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEP 69

Query: 87  LDLSSLASVRKFASDFTTKGL-PLNILINNAGIM 119
            D+++     + A D  T     L+ +++ AG  
Sbjct: 70  TDITNEDETAR-AVDAVTAWHGRLHGVVHCAGGS 102

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
             +VTGAS GIG      L   G  V   + N A      + + K+I     +      D
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKV---LVNYARSAKAAEEVSKQIEAYGGQAITFGGD 59

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +S  A V             +++++NNAGI
Sbjct: 60  VSKEADVEAMMKTAIDAWGTIDVVVNNAGI 89

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +G T +VTGA+SGIG     + A  G  +    R      +   A+      A+   +  
Sbjct: 5   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S   +V    ++   +   L+ + + AG+
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGV 90

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 61.5 bits (150), Expect = 2e-12
 Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           T    I   A  GIG +T+R L  R +  F+ +  +   T + +      P   +     
Sbjct: 4   TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELK-AINPKVNITFHTY 62

Query: 88  DLS-SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATN 137
           D++  +A  +K       +   ++ILIN AGI+          IE   A N
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAIN 107

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 28/117 (23%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELD 88
            A+VTG + GIG   +  LA  G  +  AV ++    +     +K I  A  K   + LD
Sbjct: 4   VAMVTGGAQGIGRGISEKLAADGFDI--AVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLH 143
           ++  A+      +   K    ++L+NNAGI    P + +++++++  ++ N      
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFF 118

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 12/88 (13%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AIVTG SSGIG      L   G  V     +  +  +V D         K+DV     +
Sbjct: 16  VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHF-------KIDV-----T 63

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
           +   V++     T K   ++IL+NNAGI
Sbjct: 64  NEEEVKEAVEKTTKKYGRIDILVNNAGI 91

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 34/118 (28%), Positives = 49/118 (41%), Gaps = 3/118 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  AI+TGA +GIG E     A  G  V ++  N  A   V D I +    A       
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF--ACRC 67

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFMLSKDNIELQFATNHLGSLHL 144
           D++S   +   A    +K   ++IL+NNAG     PF +   +    +  N     HL
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHL 125

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +G  AIVTG S GIGA   R L   G  V +A  ++ A   V   +           +E+
Sbjct: 11  SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEV 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATN 137
           D++  ASV              ++L  NAG+    P + ++ +  +  F  N
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVN 117

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 23/91 (25%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDVLEL 87
            A++TGAS GIG      LA  G  +     +     +  + + +E        V VL  
Sbjct: 3   KALITGASRGIGRAIALRLAEDGFAL---AIHYGQNREKAEEVAEEARRRGSPLVAVLGA 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           +L    +              L+ L+NNAGI
Sbjct: 60  NLLEAEAATALVHQAAEVLGGLDTLVNNAGI 90

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA+VTGA+ GIG      LA  G  V ++  N         A    I   K   +  
Sbjct: 5   AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGA----KAAAASIG-KKARAIAA 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S   SV+   ++       ++IL+NNA I
Sbjct: 60  DISDPGSVKALFAEIQALTGGIDILVNNASI 90

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 32/92 (34%), Positives = 41/92 (44%), Gaps = 2/92 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               A++TGA SGIG  T   LA  GV V    R      +V D IV      +   LE 
Sbjct: 27  PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEA 84

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D+S    +R    D   K   L+I++ NAGI 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGIN 116

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 61.4 bits (150), Expect = 2e-12
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           T I+TG + G+GAE  R     G  V +A      G     A  +E+         LD++
Sbjct: 7   TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----AATARELG-DAARYQHLDVT 61

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
                ++  +    +   ++ L+NNAGI
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAGI 89

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVD 83
           D  G   ++TG+S GIG  T R+ A  G  V +  R   A     D  +  +        
Sbjct: 4   DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANI---DETIASMRADGGDAA 60

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
               DL++  + ++   +F  K   +++LINNAG +
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGL 96

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                ++TGA+ GIG  T  + A  G  +           +  +A+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++  ASV +  ++       L+ +++ AGI
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGI 87

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 60.2 bits (147), Expect = 4e-12
 Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 13/91 (14%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                +VTG S GIG     +L     H  + +    + +              +  ++ 
Sbjct: 3   AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA-----------ENLKFIKA 51

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           DL+    +     D        + +  NAGI
Sbjct: 52  DLTKQQDITNVL-DIIKNV-SFDGIFLNAGI 80

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AIVTGASSGIG     + A  G  V +  RN  A  ++ D I       +   L  D+ 
Sbjct: 10  IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVG 67

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIMASP 122
             A       +   +    L+   NNAG + + 
Sbjct: 68  DEALHEALV-ELAVRRFGGLDTAFNNAGALGAM 99

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 60.7 bits (148), Expect = 4e-12
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 3/92 (3%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV-FMAVRNMAAGTDVKDAIVKEIPTAKVDVLE 86
               AIVTG   GIG    R LA  G  +    + +      V   +      A+V  L 
Sbjct: 28  ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLR 85

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            DL+ L+S +        +   ++ L+NNAGI
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGI 117

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 60.6 bits (148), Expect = 5e-12
 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK-DAIVKEIPTA--KVDV 84
                ++ G    +GA T +  AL  V++   +    A      + +  E+     KV +
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNL--VLHYHQAKDSDTANKLKDELEDQGAKVAL 67

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLG 140
            + DLS+   V K       +   ++I IN  G +   P +  S+   +     N+  
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKV 125

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 60.3 bits (147), Expect = 5e-12
 Identities = 17/88 (19%), Positives = 28/88 (31%), Gaps = 8/88 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TAIVT      G  +   L+  G  V        A  D       E+        +L   
Sbjct: 3   TAIVTNVKHFGGMGSALRLSEAGHTV--------ACHDESFKQKDELEAFAETYPQLKPM 54

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
           S     +     T+    +++L++N   
Sbjct: 55  SEQEPAELIEAVTSAYGQVDVLVSNDIF 82

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 60.2 bits (147), Expect = 5e-12
 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 7/118 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G +A++TG++ GIG          G  V +A  ++         I       ++DV   
Sbjct: 7   EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDV--- 63

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSLH 143
             +   S+    +        L+IL+NNA +   +P + +++++ E  FA N  G+L 
Sbjct: 64  --TRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLF 119

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 9/101 (8%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
              A+VTG +SG+G  TT+ L   G  V +       G DV   +      A  DV    
Sbjct: 9   DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLGDRARFAAADV---- 61

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDN 129
            +  A+V   A D       L I++N AG   +  +LS+D 
Sbjct: 62  -TDEAAVAS-ALDLAETMGTLRIVVNCAGTGNAIRVLSRDG 100

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 60.2 bits (147), Expect = 6e-12
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               A++TG ++GIG       A+ G  +  A+ ++    + + AI       +V  ++ 
Sbjct: 6   KDKLAVITGGANGIGRAIAERFAVEGADI--AIADLVPAPEAEAAIRNL--GRRVLTVKC 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S    V  F     +     +IL+NNAGI
Sbjct: 62  DVSQPGDVEAFGKQVISTFGRCDILVNNAGI 92

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 60.2 bits (147), Expect = 6e-12
 Identities = 24/122 (19%), Positives = 38/122 (31%), Gaps = 8/122 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
           T  T +V GA   IG       A  G +V   V       +     V EI         +
Sbjct: 7   TNRTIVVAGAGRDIGRACAIRFAQEGANV---VLTYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA--SPFM-LSKDNIELQFATNHLGSL 142
           + DL++ A V    S    K   ++ L++ AG +        + +         N     
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 143 HL 144
             
Sbjct: 124 LT 125

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +VTG   GIGA   R     G  V +  ++ + G     A+ +E+P A    +  D++
Sbjct: 11  VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELPGAV--FILCDVT 64

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIMASPFML---SKDNIELQFATN 137
               V+      T +    L+ ++NNAG    P      S          N
Sbjct: 65  QEDDVKT-LVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELN 114

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 60.3 bits (147), Expect = 7e-12
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGA   IG  T   LA  G  + +   N  A    + ++ ++    +      
Sbjct: 6   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 63

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D++S  +V             ++ L NNAG 
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY 94

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 59.9 bits (146), Expect = 8e-12
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  A+VTG+  GIGA     L   G  V   V N A  T   + +V EI         +
Sbjct: 17  DGKVALVTGSGRGIGAAVAVHLGRLGAKV---VVNYANSTKDAEKVVSEIKALGSDAIAI 73

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLG 140
           + D+  +  + K           L+I ++N+G+++      ++++  +  F+ N  G
Sbjct: 74  KADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRG 130

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 60.2 bits (146), Expect = 9e-12
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI---VKEIPTA--KV 82
            G T  +TGAS GIG       A  G ++ +A +       +   I    +EI     K 
Sbjct: 44  AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA 103

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLG 140
               +D+     +         K   ++IL+NNA  ++ +  +      ++L    N  G
Sbjct: 104 LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRG 163

Query: 141 SLHL 144
           +   
Sbjct: 164 TYLA 167

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 5/92 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               A++T  + G+G + T  L  +G  V        + T   + + +       ++  +
Sbjct: 6   FVRHALITAGTKGLGKQVTEKLLAKGYSV---TVTYHSDTTAMETMKETYKDVEERLQFV 62

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAG 117
           + D++    + K   +  +    ++ LINNAG
Sbjct: 63  QADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDL 89
            AI+TG + GIG          G  V +  R+   G    +   K +    ++   + D 
Sbjct: 8   VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVG----EKAAKSVGTPDQIQFFQHDS 63

Query: 90  SSLASVRKFASDFTTKGL-PLNILINNAGI 118
           S      K   D T K   P++ L+NNAGI
Sbjct: 64  SDEDGWTK-LFDATEKAFGPVSTLVNNAGI 92

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G   ++TG+S+G+G       A     V +  R+        +++++EI     +   +
Sbjct: 6   EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEA---NSVLEEIKKVGGEAIAV 62

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
           + D++  + V         +   L+++INNAG+        +S  +      TN
Sbjct: 63  KGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTN 116

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 59.4 bits (145), Expect = 1e-11
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTG +SG+G E  ++L   G  V  +  N AAG      +  E+   +   +  D+S
Sbjct: 8   VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----QQLAAELG-ERSMFVRHDVS 62

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGI 118
           S A           + L  LN+L+NNAGI
Sbjct: 63  SEADWTL-VMAAVQRRLGTLNVLVNNAGI 90

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 8/110 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A++TGA SG G    +  A  G  V +  R+ A    V   I         D+     S
Sbjct: 11  VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADI-----S 65

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASP---FMLSKDNIELQFATN 137
             A V        +K   ++IL+NNAGI   P    ++  +  +     N
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVN 115

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                ++TGAS GIGA   R    R   V    R++    D             +  +  
Sbjct: 27  QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAG 75

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S   +  +   +   +   ++ L+NNAG+
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGV 106

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 8/110 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TG  A++TG +SG+G          G  V +  ++          +           +  
Sbjct: 4   TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERL----RELEVAHG-GNAVGVVG 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASP---FMLSKDNIELQF 134
           D+ SL   ++ A         ++ LI NAGI         L +D I+  F
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAF 108

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+V+G + G+GA   R +   G  V         G     A+  E+       + LD++
Sbjct: 9   VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----KAMAAELA-DAARYVHLDVT 63

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
             A  +       T    L++L+NNAGI
Sbjct: 64  QPAQWKAAVDTAVTAFGGLHVLVNNAGI 91

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
              T IVTG + GIG   TR +A  G +V +  R+ A   +V + + KE    K    + 
Sbjct: 13  VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQC 71

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+S+   V K          P++ LI NAG+
Sbjct: 72  DVSNTDIVTKTIQQIDADLGPISGLIANAGV 102

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 58.7 bits (143), Expect = 2e-11
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 13/91 (14%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                IVTGAS GIG          G  V     +                 AK D +E 
Sbjct: 7   RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIEC 53

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           D+++   V+        +   +++L+NNAGI
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGI 84

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 9   PSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD 68
                A +         D  G  AIVTGA +GIG    R LA  G HV  A  +  A   
Sbjct: 9   MGTLEAQTQGPGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAA-- 66

Query: 69  VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             DA   +I         +D+S    +             ++ L+ NAG+
Sbjct: 67  --DAAATKIG-CGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGV 113

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 6/116 (5%)

Query: 8   GPSGFSASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHV-FMAVRNMAAG 66
           G S       +  V +G       A+VTGA+  IG      L   G  V      +  A 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA 61

Query: 67  TDVKDAIVKEIPTAKVDVLELDLSS----LASVRKFASDFTTKGLPLNILINNAGI 118
             + D + KE       V + DL++     AS  +  +         ++L+NNA  
Sbjct: 62  VSLADELNKERS-NTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASA 116

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 28/112 (25%), Positives = 40/112 (35%), Gaps = 15/112 (13%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTGA+ GIG      L   G  V +A R +A               A    L  
Sbjct: 27  EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI-------------AADLHLPG 73

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMAS-PFM-LSKDNIELQFATN 137
           DL   A               L+I++NNAG+++       +  +  L    N
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVN 125

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 57.9 bits (141), Expect = 5e-11
 Identities = 30/90 (33%), Positives = 39/90 (43%), Gaps = 7/90 (7%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            AI+TGA  GIG ET+RVLA  G  V +A                 +         +DL+
Sbjct: 13  VAIITGACGGIGLETSRVLARAGARVVLADLPETDL----AGAAASVG-RGAVHHVVDLT 67

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIM 119
           +  SVR    DFT      L+I+ NNA   
Sbjct: 68  NEVSVRA-LIDFTIDTFGRLDIVDNNAAHS 96

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 11/116 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDV 84
               A++TG +  IG      L  +G  V   V +          +V E+  A      +
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRV---VVHYRHSEGAAQRLVAELNAARAGSAVL 66

Query: 85  LELDLSSLASVRKFASDFTTKGL----PLNILINNAGIMA-SPFMLSKDNIELQFA 135
            + DLS  +S+     D            ++L+NNA     +P +   D      A
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADA 122

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 57.2 bits (139), Expect = 6e-11
 Identities = 21/94 (22%), Positives = 31/94 (32%), Gaps = 12/94 (12%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           +D +G    VTGA  GIG  T       G  V    +                       
Sbjct: 3   MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE------------QYPFAT 50

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
             +D++  A V +       +   L+ L+N AGI
Sbjct: 51  EVMDVADAAQVAQVCQRLLAETERLDALVNAAGI 84

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 57.2 bits (139), Expect = 7e-11
 Identities = 20/91 (21%), Positives = 33/91 (36%), Gaps = 2/91 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A VTG+S GIG       A  G  V +   +  A    +               + 
Sbjct: 33  KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKC 90

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           ++S   SV +  S        +++ + NAG+
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGV 121

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 57.1 bits (139), Expect = 8e-11
 Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 6/93 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
               A+VT ++ GIG    R LA  G HV ++ R         D  V  +      V   
Sbjct: 13  ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENV----DRTVATLQGEGLSVTGT 68

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
              +       +  +        ++IL++NA +
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV 101

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 56.9 bits (138), Expect = 1e-10
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 25/115 (21%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +++G ++GIGA T +VL   G  +         G D++DA V             DLS
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQI--------VGIDIRDAEVIA-----------DLS 43

Query: 91  SLASVRKFASDFTTKGL-PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           +    ++  +D   K    ++ L+  AG+           +    + N+ G+  L
Sbjct: 44  TAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-----KVLGNVVSVNYFGATEL 93

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 55.7 bits (135), Expect = 1e-10
 Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 26/120 (21%)

Query: 27  ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLE 86
           +  +  ++ GAS  +G+     L  +   V  A R+                      + 
Sbjct: 1   SNAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGD-------------------VT 40

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATNHLGSLHL 144
           +D++++ S++K           ++ +++  G    SP   L+ +   +  ++   G ++L
Sbjct: 41  VDITNIDSIKKMYEQVG----KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINL 96

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 13/93 (13%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
                + +VTG + GIG    + LA  G  V +  R   A                +  +
Sbjct: 12  PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGV 58

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           E+D++   +V +  +       P+ +L++NAG+
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL 91

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 56.4 bits (136), Expect = 2e-10
 Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 12/131 (9%)

Query: 14  ASSPAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI 73
           A         G    G  A+V   +  +G  +  +LA  G  V +  R +       D++
Sbjct: 104 AGVALVVKAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSV 163

Query: 74  VKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ 133
            K      V+V   + +  AS  +            + +           +L +   + +
Sbjct: 164 NKRFK---VNVTAAETADDASRAEAVKG-------AHFVFTAGA--IGLELLPQAAWQNE 211

Query: 134 FATNHLGSLHL 144
            +   +   + 
Sbjct: 212 SSIEIVADYNA 222

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 55.7 bits (135), Expect = 2e-10
 Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 7/117 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI---VKEIPTA--KV 82
            G T  ++G S GIG    + +A  G +V +  ++      +   I    KEI  A  + 
Sbjct: 8   RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQA 67

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
             +  D+    +V    +    +   ++I +NNA  +       +     +L     
Sbjct: 68  LPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQ 124

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 13/93 (13%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
                + +VTG + GIG    R  A  G  V +  R+                      +
Sbjct: 18  SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAV 64

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           + D++    V +   +      P+ +LI NAG+
Sbjct: 65  KCDITDTEQVEQAYKEIEETHGPVEVLIANAGV 97

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 15/98 (15%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           +A+VTG +SG+G      L  RG  V +                 ++   + DV     +
Sbjct: 4   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE---------DLIYVEGDV-----T 49

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKD 128
               VR+  +    +  PL  +++ AG+  +  +L K+
Sbjct: 50  REEDVRRAVARAQEEA-PLFAVVSAAGVGLAEKILGKE 86

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 55.6 bits (135), Expect = 3e-10
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 8/88 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VT A    G      L   G  V     + A      +    E        L     
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAA---ERQRFESENPGTIAL----- 54

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
           +     +        G  ++ +++N  I
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYI 82

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 55.3 bits (134), Expect = 3e-10
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGAS GIG      L   G  V++  R++     V               +  
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCV--PVVC 61

Query: 88  DLSSLASVRKFASDFTTKGL-PLNILINNAGIMASPFMLSKDN 129
           D S  + VR        +    L++L+NNA       + +++ 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNK 104

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 19/91 (20%), Positives = 33/91 (36%), Gaps = 8/91 (8%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTG + GIG    +  A  G  V +              + + I        ++
Sbjct: 5   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-----EVAEAI---GGAFFQV 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
           DL       +F  +       +++L+NNA I
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAI 87

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 54.5 bits (132), Expect = 7e-10
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI---VKEIPTA--KV 82
           +G T  +TGAS GIG       A  G +V +A ++  A   +   I      +  A  + 
Sbjct: 5   SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQG 64

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA-SPFM-LSKDNIELQFATN 137
             L+ D+     VR   +        ++IL+NNA  +     +       +L    N
Sbjct: 65  LALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVN 121

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score = 54.1 bits (131), Expect = 9e-10
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 9/92 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDL 89
            AI+TG + GIG  T ++    G  V +A      G      +   I     +  +  D+
Sbjct: 18  VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHG----QKVCNNIGSPDVISFVHCDV 73

Query: 90  SSLASVRKFASDFTTK--GLPLNILINNAGIM 119
           +    VR    D T    G  L+I+  N G++
Sbjct: 74  TKDEDVRN-LVDTTIAKHG-KLDIMFGNVGVL 103

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 53.8 bits (130), Expect = 9e-10
 Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 13/120 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +    IV G    +G+         G  V     +     D    +              
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILV----------DGNK 51

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHL 144
           + +         +  + +G  ++ +   AG  A   +       N +L    +   S   
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 53.7 bits (130), Expect = 2e-09
 Identities = 30/131 (22%), Positives = 42/131 (32%), Gaps = 15/131 (11%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMA--VRNMAAGTDVKDAIVKEIPTAKVDVL 85
               A+VTG  SGIG       A  G  V +            VK  I +     K  +L
Sbjct: 48  KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLL 105

Query: 86  ELDLSSLASVRKFASDFTTKGL-PLNILINNAGI--MASPFM-LSKDNIELQFATNHLGS 141
             DLS  +  R        + L  L+IL   AG          L+ +  +  FA N    
Sbjct: 106 PGDLSDESFARSLV-HKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFAL 164

Query: 142 LHL------HM 146
             +       +
Sbjct: 165 FWITQEAIPLL 175

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 12/120 (10%), Positives = 27/120 (22%), Gaps = 13/120 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                +V G    +G+   +    R   V                +           +  
Sbjct: 6   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIV----------KMTD 55

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHL 144
             +  A               ++ ++  AG  A   +       N +L +  +   S   
Sbjct: 56  SFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 20/114 (17%), Positives = 37/114 (32%), Gaps = 23/114 (20%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KV 82
             T   A+VTGA+  +G      L   G  V     +        +A+   +        
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAV---CLHYHRSAAEANALSATLNARRPNSA 62

Query: 83  DVLELDLSSLASVRKFASDFTTKGL-----------------PLNILINNAGIM 119
             ++ DLS++A+     +D +                       ++L+NNA   
Sbjct: 63  ITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 116

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 52.1 bits (125), Expect = 6e-09
 Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 23/112 (20%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDV 84
           T   A+VTGA+  +G      L   G  V     +        +A+   +          
Sbjct: 45  TVPVALVTGAAKRLGRSIAEGLHAEGYAV---CLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 85  LELDLSSLASVRKFASDFTTKGL-----------------PLNILINNAGIM 119
           ++ DLS++A+     +D +                       ++L+NNA   
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 153

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 51.8 bits (125), Expect = 7e-09
 Identities = 23/94 (24%), Positives = 31/94 (32%), Gaps = 4/94 (4%)

Query: 28  TGLTAIVTGAS--SGIGAETTRVLALRGVHV-FMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
            G   +VTGAS   G+G E  R  A  G  V            +    + K     K   
Sbjct: 19  KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAKA 77

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +  + S  S  K   D       ++  I NAG 
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA 111

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 11/88 (12%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTG S GIG      L  RG  V +A RN                +     L  DL 
Sbjct: 4   KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE----------AAQSLGAVPLPTDLE 53

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI 118
                +            L++L++ A +
Sbjct: 54  K-DDPKGLVKRALEALGGLHVLVHAAAV 80

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 21/91 (23%), Positives = 28/91 (30%), Gaps = 17/91 (18%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                +V  AS GIG     VL+  G  V +  RN           V             
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 65

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI 118
                  +RK       K   ++IL+ NAG 
Sbjct: 66  -----CDLRKDLDLLFEKVKEVDILVLNAGG 91

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 49.2 bits (118), Expect = 5e-08
 Identities = 21/91 (23%), Positives = 31/91 (34%), Gaps = 2/91 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT-DVKDAIVKEIPTAKVDVLELDL 89
              +TG++SGIGA    +LA  G  V    R  A    D+     +E       +     
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETA-VAAVLDRCGG 61

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMA 120
                V       T     L + +N  G+ A
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSA 92

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 8/115 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLE 86
            G   ++TG  SGIG   +   A  G ++ +A +       + K  + KE    K  +L 
Sbjct: 46  KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLP 103

Query: 87  LDLSSLASVRKFASDFTTKGL-PLNILINNAGI--MASPFM-LSKDNIELQFATN 137
            DLS     +      T + L  LNIL+NN            ++ + +E  F  N
Sbjct: 104 GDLSDEQHCKDIV-QETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRIN 157

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 46.5 bits (111), Expect = 5e-07
 Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 12/121 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV--------FMAVRNMAAGTDVKDAIVKEIPT 79
                +VTG + G G      LA  G  +                A +   +    E+  
Sbjct: 9   QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEK 68

Query: 80  A--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMASPFMLSKDNIELQFAT 136
              K    E+D+   A+V +            L++++ NAGI      L        F  
Sbjct: 69  TGRKAYTAEVDVRDRAAVSR-ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127

Query: 137 N 137
           +
Sbjct: 128 D 128

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 12/111 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV--------FMAVRNMAAGTDVKDAIVKEIPT 79
            G  A +TGA+ G G      LA  G  +           V+   +  D     V+++  
Sbjct: 27  EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEA 86

Query: 80  A--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMASPFMLSK 127
              ++   ++D+    +++  A D     L  L+I++ NA + +    L++
Sbjct: 87  LGRRIIASQVDVRDFDAMQA-AVDDGVTQLGRLDIVLANAALASEGTRLNR 136

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 44.1 bits (105), Expect = 3e-06
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV--------FMAVRNMAAGTDVKDAIVKEIPT 79
           TG  A +TGA+ G G      LA  G  +          +V    A  +   A VK +  
Sbjct: 12  TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVED 71

Query: 80  A--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMA 120
              ++   + D+    S+   A       L  L+I++ NAGI  
Sbjct: 72  IGSRIVARQADVRDRESLSA-ALQAGLDELGRLDIVVANAGIAP 114

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 44.3 bits (105), Expect = 4e-06
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHV-----FMAVRNMAAGTDVKDAIVKEIPT 79
           +D      I+TGA  G+G   +   A  G  V       A+      +   D +V EI  
Sbjct: 4   VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK 63

Query: 80  A-------KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNI 130
                     +VL+ D     +V+ F +        ++++INNAGI+  AS   +++ + 
Sbjct: 64  NGGVAVADYNNVLDGDKIVETAVKNFGT--------VHVIINNAGILRDASMKKMTEKDY 115

Query: 131 ELQFATNHLGSLHL 144
           +L    +  G+  +
Sbjct: 116 KLVIDVHLNGAFAV 129

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 43.4 bits (103), Expect = 6e-06
 Identities = 23/108 (21%), Positives = 40/108 (37%), Gaps = 16/108 (14%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV------------FMAVRNMAAGTDVKDAIVK 75
            G  A VTGA+ G G      LA  G  +             +     A+  +       
Sbjct: 10  EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETAD 69

Query: 76  EIPTA--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMA 120
            +     ++   E+D+    +++  A D   + L  L+I++ NAGI  
Sbjct: 70  LVKGHNRRIVTAEVDVRDYDALKA-AVDSGVEQLGRLDIIVANAGIGN 116

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 13/105 (12%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV---------FMAVRNMAAGTDVKDAIVKEIP 78
            G  A +TGA+ G G      +A  G  +            V    A  D     V+ + 
Sbjct: 10  EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVE 69

Query: 79  TA--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMA 120
            A  ++    +D      +RK   D     L  L+I++ NAG+ A
Sbjct: 70  AANRRIVAAVVDTRDFDRLRK-VVDDGVAALGRLDIIVANAGVAA 113

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 42.9 bits (102), Expect = 9e-06
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 13/105 (12%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV---------FMAVRNMAAGTDVKDAIVKEIP 78
            G  A +TGA+ G G      LA  G  +           +V    A  +  D   + + 
Sbjct: 14  QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVE 73

Query: 79  TA--KVDVLELDLSSLASVRKFASDFTTKGL-PLNILINNAGIMA 120
               K     LD+   A++R+       +    L++++ NAG+++
Sbjct: 74  DQGRKALTRVLDVRDDAALRE-LVADGMEQFGRLDVVVANAGVLS 117

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV--------FMAVRNMAAGTDVKDAIVKEIPT 79
            G TA++TG + G+G      LA  G  +           V    A  D     V  +  
Sbjct: 9   EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEK 68

Query: 80  A--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
              +    ++D+   A++  F ++       ++I I NAGI  
Sbjct: 69  TGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST 111

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 10/103 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV--------FMAVRNMAAGTDVKDAIVKEIPT 79
            G  A +TGA+ G G      LA  G  +           +       +     V+ +  
Sbjct: 45  QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEE 104

Query: 80  A--KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMA 120
              ++   + D+  LAS++    +   +   ++IL++N GI  
Sbjct: 105 QGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN 147

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVF-----MAVRNMAAGTDVKDAIVKE 76
              +   G   +VTGA  G+G       A RG  V         + +  G+   D +V+E
Sbjct: 2   ASPLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEE 61

Query: 77  IPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQF 134
           I       +  +  S+ +  K           +++++NNAGI+   S   +S ++ ++  
Sbjct: 62  IRRRGGKAV-ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQ 120

Query: 135 ATNHLGSLHL 144
             +  GS  +
Sbjct: 121 RVHLRGSFQV 130

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 22/142 (15%)

Query: 17  PAEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFM-----AVRNMAAGTDVKD 71
                   +   G  A+VTGA +G+G E   + A RG  V +           A     D
Sbjct: 7   HMSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAAD 66

Query: 72  AIVKEIPTA-------KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASP 122
            +V EI  A          V++       +++ F          ++IL+NNAGI+   S 
Sbjct: 67  IVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGR--------VDILVNNAGILRDRSL 118

Query: 123 FMLSKDNIELQFATNHLGSLHL 144
              S+ +  L    +  GS   
Sbjct: 119 VKTSEQDWNLVNDVHLKGSFKC 140

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHV------FMAVRNMAAGTDVKDAIVKEIPTA- 80
            G   IVTGA  GIG       A  G  V           + A+G     ++V EI  A 
Sbjct: 26  DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85

Query: 81  -KVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI 118
            +      +++                  L++L+NNAGI
Sbjct: 86  GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI 124

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.97
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.97
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.96
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.96
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.94
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.94
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.94
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.94
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.94
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.94
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.94
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.94
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.94
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.94
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.94
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.94
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.94
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.94
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.93
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.93
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.93
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.93
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.93
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.93
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.93
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.93
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.93
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.93
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.93
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.93
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.93
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.93
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.93
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.93
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.93
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.93
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.93
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.93
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.93
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.93
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.93
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.93
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.93
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.93
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.93
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.93
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.93
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.93
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.93
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.93
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.93
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.93
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.93
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.93
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.93
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.93
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.93
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.93
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.93
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.92
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.92
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.92
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.92
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.92
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.92
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.92
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.92
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.92
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.92
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.92
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.92
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.92
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.92
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.92
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.92
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.92
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.92
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.92
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.92
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.92
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.92
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.92
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.92
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.92
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.92
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.92
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.92
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.92
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.92
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.91
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.91
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.91
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.91
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.91
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.91
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.91
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.91
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.91
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.91
1spx_A	278	Short-chain reductase family member (5L265); paral	99.91
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.91
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.91
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.91
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.91
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.91
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.91
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.91
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.91
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.91
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.91
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.91
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.91
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.91
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.91
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.91
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.91
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.91
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.91
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.9
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.9
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.9
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.9
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.9
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.9
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.9
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.9
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.9
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.9
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.9
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.9
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.9
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.9
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.9
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.9
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.9
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.9
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.9
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.9
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.9
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.9
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.9
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.9
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.9
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.9
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.89
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.89
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.89
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.89
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.89
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.89
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.89
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.89
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.89
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.89
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.89
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.88
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.88
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.88
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.88
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.88
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.88
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.88
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.87
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.87
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.87
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.87
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.87
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.87
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.87
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.87
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.86
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.86
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.86
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.86
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.86
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.86
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.85
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.85
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.85
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.85
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.84
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.84
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.84
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.83
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.83
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.83
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.83
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.83
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.82
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.82
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.82
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.82
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.81
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.81
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.81
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.81
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.78
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.78
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.78
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.77
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.75
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.75
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.73
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.72
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.72
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.71
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.71
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.7
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.68
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.67
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.66
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.66
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.66
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.66
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.65
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.64
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.64
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.63
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.63
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.62
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.62
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.61
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.61
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.6
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.6
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.6
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.6
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.59
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.59
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.59
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.59
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.58
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.58
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.58
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.55
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.55
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.55
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.55
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.54
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.53
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.53
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.53
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.52
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.52
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.52
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.52
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.51
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.51
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.51
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.5
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.5
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.5
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.49
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.48
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.48
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.48
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.46
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.46
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.45
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.45
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.45
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.44
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.43
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.42
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.42
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.42
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.41
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.39
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.39
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.38
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.38
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.38
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.36
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.33
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.33
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.32
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.32
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.31
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.3
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.3
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.3
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.29
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.28
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.26
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.25
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.24
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.23
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.21
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.21
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.21
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.19
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.19
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.18
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.18
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.06
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.05
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.98
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.92
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.91
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.9
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.9
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	98.87
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.86
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.83
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.76
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.75
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	98.72
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.71
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.68
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.67
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.65
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.61
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.61
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.59
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.59
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.58
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.56
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.55
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.53
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.52
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.48
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.46
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.4
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.36
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.35
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.33
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.32
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.3
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.3
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.27
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.25
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	98.2
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.19
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.19
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.18
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.16
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.16
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.16
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.16
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	98.14
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.14
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.12
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.1
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.07
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.04
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.03
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.03
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.03
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	98.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.99
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.98
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.94
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.93
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	97.91
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.9
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.88
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.87
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.86
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.86
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.75
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.74
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.73
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.72
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.71
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.7
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.7
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.7
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.65
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.64
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	97.62
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.61
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.6
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.57
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.56
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.54
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.53
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.53
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	97.53
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.52
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.52
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	97.52
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.5
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.49
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.49
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.47
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.45
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.44
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.43
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.43
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.43
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.43
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.41
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.39
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.38
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	97.38
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.36
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.32
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.29
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.29
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.28
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.28
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.28
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.26
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.25
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	97.24
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.22
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.21
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.19
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.18
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.17
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.17
1tt5_B	434	Ubiquitin-activating enzyme E1C isoform 1; cell cy	97.16
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.12
1y8q_B	640	Anthracycline-, ubiquitin-like 2 activating enzyme	97.09
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	97.07
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.07
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.07
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	97.06
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.05
1y8q_A	346	Ubiquitin-like 1 activating enzyme E1A; SUMO, hete	97.04
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	97.03
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.02
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.01
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.99
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.97
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.89
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.87
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.86
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.86
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.86
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.83
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.83
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.83
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	96.82
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.82
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.8
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	96.78
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.77
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.76
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.76
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	96.75
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.73
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	96.73
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.71
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.69
1lnq_A	336	MTHK channels, potassium channel related protein;	96.67
2nvu_B	805	Maltose binding protein/NEDD8-activating enzyme E1	96.62
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.62
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.61
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.58
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	96.58
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	96.57
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.57
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	96.55
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.52
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.51
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.51
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.45
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.43
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.42
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.4
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.39
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.38
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	96.34
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.34
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.3
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	96.29
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.26
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.25
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	96.23
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.22
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	96.22
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.22
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.2
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	96.2
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.19
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.16
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.09

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.97  E-value=5.9e-31  Score=189.18  Aligned_cols=122  Identities=25%  Similarity=0.319  Sum_probs=113.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+++++||+++|||+++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~--g~~~~~~~~Dv~~~~~v~~~~~~~   80 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK--GYDAHGVAFDVTDELAIEAAFSKL   80 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999998888888888876  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|+||+||||||+..  +..++++++|++++++|+.|+|+++|
T Consensus        81 ~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  126 (255)
T 4g81_D           81 DAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSR  126 (255)
T ss_dssp             HHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999864  44589999999999999999999886

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.97  E-value=1.2e-30  Score=187.54  Aligned_cols=119  Identities=24%  Similarity=0.206  Sum_probs=111.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +|+||+++|||+++|||+++|++|+++|++|++++|+.+.++++.+++++.  +.++.++.+|++|+++++++++++.++
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~~~   81 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM--GKEVLGVKADVSKKKDVEEFVRRTFET   81 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999999999999899999999876  678999999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ||+||+||||||+..   +..+.++++|+++|++|+.|+|+++|
T Consensus        82 ~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  125 (254)
T 4fn4_A           82 YSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSR  125 (254)
T ss_dssp             HSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999763   34578999999999999999999886

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.96  E-value=2.1e-29  Score=182.66  Aligned_cols=116  Identities=21%  Similarity=0.264  Sum_probs=106.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|+.+.+++..+++     +.++..+.+|++|+++++++++++.++
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~-----g~~~~~~~~Dv~~~~~v~~~~~~~~~~  100 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI-----GGGAVGIQADSANLAELDRLYEKVKAE  100 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999987777766665     567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||+||||||+..  +..+.++++|+++|++|+.|+|+++|
T Consensus       101 ~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~  143 (273)
T 4fgs_A          101 AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQ  143 (273)
T ss_dssp             HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999864  55689999999999999999999876

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.96  E-value=2.6e-28  Score=175.88  Aligned_cols=121  Identities=21%  Similarity=0.255  Sum_probs=107.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      |.++|+||++||||+++|||+++|++|+++|++|++++|+.+..+ ..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~   77 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQR--QPRATYLPVELQDDAQCRDAVAQT   77 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhc--CCCEEEEEeecCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999877643 44555555  578899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC-CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA-SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++||++|+||||||+.. ...+.+.++|++.+++|+.|+|+++|
T Consensus        78 ~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  122 (258)
T 4gkb_A           78 IATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAH  122 (258)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999864 34578999999999999999999876

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.95  E-value=2e-27  Score=170.14  Aligned_cols=112  Identities=19%  Similarity=0.178  Sum_probs=99.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|++||||+++|||+++|++|+++|++|++++|+++..+    ++.+.  ..++.++.+|++|+++++++++++.+++|+
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~----~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~   75 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA----DFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQR   75 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            599999999999999999999999999999999865443    33333  467889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ||+||||||+..  +..+++.++|++++++|+.|+|+++|
T Consensus        76 iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  115 (247)
T 3ged_A           76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSR  115 (247)
T ss_dssp             CCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999864  34589999999999999999999876

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=8.2e-27  Score=169.02  Aligned_cols=122  Identities=25%  Similarity=0.260  Sum_probs=109.9

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +...+++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|.+++.++++++
T Consensus        22 m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           22 MDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             -CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHH
Confidence            445689999999999999999999999999999999999988888888877766  567889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  145 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSR  145 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999864  34578999999999999999999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=1.4e-26  Score=167.00  Aligned_cols=123  Identities=23%  Similarity=0.251  Sum_probs=111.0

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +++++++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+.. ..++.++.+|++|++++.++++++
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLG-SGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTS-SSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhC-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999888888888887652 368999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..  +..+.++++|++.+++|+.|+++++|
T Consensus        83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  128 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQ  128 (262)
T ss_dssp             HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999864  34578999999999999999999875

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.94  E-value=3.9e-27  Score=168.28  Aligned_cols=114  Identities=25%  Similarity=0.339  Sum_probs=99.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++|+||+++|||+++|||+++|+.|+++|++|++++|+.+  ++..+.+.+.  +.++.++.+|++|+++++++++   
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~--g~~~~~~~~Dv~d~~~v~~~~~---   76 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKD--GGNASALLIDFADPLAAKDSFT---   76 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHT--TCCEEEEECCTTSTTTTTTSST---
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHh--CCcEEEEEccCCCHHHHHHHHH---
Confidence            46899999999999999999999999999999999999754  4555666665  6789999999999998877653   


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++++|+||||||+..  +..++++++|++++++|+.|+|+++|
T Consensus        77 --~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~  119 (247)
T 4hp8_A           77 --DAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQ  119 (247)
T ss_dssp             --TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             --hCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHH
Confidence              589999999999864  44589999999999999999999886

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.94  E-value=2.2e-26  Score=166.12  Aligned_cols=122  Identities=25%  Similarity=0.251  Sum_probs=111.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|++||||+++|||++++++|+++|++|++++|+.+..++..+++....++.++.++.+|++|++++.++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999888888888887755455699999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  127 (265)
T 3lf2_A           84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVR  127 (265)
T ss_dssp             HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999864  44578999999999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.94  E-value=2.8e-26  Score=166.70  Aligned_cols=121  Identities=26%  Similarity=0.292  Sum_probs=110.7

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~v~~~~~~~~  104 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV--GGKALPIRCDVTQPDQVRGMLDQMT  104 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888888888765  5688999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  149 (276)
T 3r1i_A          105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQ  149 (276)
T ss_dssp             HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864  33478999999999999999999876

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.94  E-value=2.7e-26  Score=165.14  Aligned_cols=122  Identities=10%  Similarity=0.088  Sum_probs=107.9

Q ss_pred             CCCCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +++++||++||||+++  |||+++|+.|+++|++|++++|+++..+++.+.+.+.. +.++.++.+|++|++++.+++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   79 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQ   79 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHH
Confidence            4679999999999865  99999999999999999999999888888877776653 45889999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|++|||||+..      +..+.+.++|+..+++|+.+++++++
T Consensus        80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  130 (256)
T 4fs3_A           80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAH  130 (256)
T ss_dssp             HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999753      23467889999999999999988764

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.94  E-value=3.1e-26  Score=167.79  Aligned_cols=124  Identities=22%  Similarity=0.229  Sum_probs=111.5

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..++++++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+.. ..++.++.+|++|++++.+++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHH
Confidence            34467899999999999999999999999999999999999988888888887652 25899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  159 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQ  159 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999864  34478999999999999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.9e-26  Score=168.15  Aligned_cols=123  Identities=30%  Similarity=0.281  Sum_probs=107.5

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..++.+.+|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.+++++
T Consensus        21 ~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~   98 (283)
T 3v8b_A           21 QSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA--GGQAIALEADVSDELQMRNAVRD   98 (283)
T ss_dssp             ------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHH
Confidence            3456789999999999999999999999999999999999988888888887654  57899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccC---CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||+.   .+..+.++++|++.+++|+.|++++++
T Consensus        99 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (283)
T 3v8b_A           99 LVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLH  146 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999985   345578999999999999999999875

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.94  E-value=2.5e-26  Score=165.22  Aligned_cols=122  Identities=24%  Similarity=0.274  Sum_probs=110.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.+++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~   83 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA--GGKAIGLECNVTDEQHREAVIKAA   83 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999988888888888765  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+... ..+.+.++|++.+++|+.|++++++
T Consensus        84 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  128 (256)
T 3gaf_A           84 LDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQ  128 (256)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999998642 2278999999999999999999876

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.94  E-value=5.1e-26  Score=163.27  Aligned_cols=119  Identities=20%  Similarity=0.214  Sum_probs=108.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            4678999999999999999999999999999999999999999998888876  67899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      + +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  123 (252)
T 3h7a_A           81 H-APLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGR  123 (252)
T ss_dssp             H-SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             h-CCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            8 99999999999864  33478999999999999999999875

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.94  E-value=1.3e-26  Score=165.21  Aligned_cols=109  Identities=23%  Similarity=0.236  Sum_probs=96.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|++|+++|++|++++|+.+.++..      .  +.++..+.+|++|+++++++++    +
T Consensus         8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~------~--~~~~~~~~~Dv~~~~~v~~~~~----~   75 (242)
T 4b79_A            8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAP------R--HPRIRREELDITDSQRLQRLFE----A   75 (242)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSC------C--CTTEEEEECCTTCHHHHHHHHH----H
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhh------h--cCCeEEEEecCCCHHHHHHHHH----h
Confidence            36899999999999999999999999999999999997765421      1  4578899999999999988775    4


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..+..+++.++|++++++|+.|+|+++|
T Consensus        76 ~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~  116 (242)
T 4b79_A           76 LPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQ  116 (242)
T ss_dssp             CSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            79999999999998777788999999999999999999876

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=4.2e-26  Score=164.59  Aligned_cols=122  Identities=17%  Similarity=0.203  Sum_probs=109.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +...+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   82 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT--GRRALSVGTDITDDAQVAHLVDET   82 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            334689999999999999999999999999999999999988888888888765  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||...   +..+.+.++|++.+++|+.|++++++
T Consensus        83 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  129 (264)
T 3ucx_A           83 MKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQ  129 (264)
T ss_dssp             HHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999998752   34478999999999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.94  E-value=3e-26  Score=166.68  Aligned_cols=120  Identities=28%  Similarity=0.290  Sum_probs=105.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|++||||+++|||+++|++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~   97 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA--GHDVDGSSCDVTSTDEVHAAVAAAVE   97 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999988888888888765  67899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        98 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (279)
T 3sju_A           98 RFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTR  141 (279)
T ss_dssp             HHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  33478999999999999999999875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.94  E-value=1.9e-26  Score=166.46  Aligned_cols=111  Identities=19%  Similarity=0.236  Sum_probs=97.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++|+||++||||+++|||+++|++|+++|++|++++|+.++.            ..+..++.+|+++++++.++++++.
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~~   73 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG------------LPEELFVEADLTTKEGCAIVAEATR   73 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT------------SCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC------------CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            3579999999999999999999999999999999999975421            1234478999999999999999999


Q ss_pred             hcCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..    +..++++++|++++++|+.|+++++|
T Consensus        74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  120 (261)
T 4h15_A           74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDR  120 (261)
T ss_dssp             HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999753    34578999999999999999999876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.94  E-value=2.1e-26  Score=166.89  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=110.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++++|++||||+++|||+++|++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~   98 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV--GHDAEAVAFDVTSESEIIEAFARLD   98 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT--TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988888888888765  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  143 (271)
T 4ibo_A           99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGR  143 (271)
T ss_dssp             HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999864  33478999999999999999999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.94  E-value=2.5e-26  Score=166.03  Aligned_cols=124  Identities=23%  Similarity=0.309  Sum_probs=110.7

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..++++++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|++++.+++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~v~~~~~~   91 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQF-GTDVHTVAIDLAEPDAPAELARR   91 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSTTHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHH
Confidence            34457899999999999999999999999999999999999888888877776632 56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        92 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  138 (266)
T 4egf_A           92 AAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLAS  138 (266)
T ss_dssp             HHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999874  33478999999999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.94  E-value=7.3e-26  Score=164.43  Aligned_cols=123  Identities=18%  Similarity=0.171  Sum_probs=109.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+..+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|++++.++++++
T Consensus        21 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   99 (277)
T 4fc7_A           21 CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGAT-GRRCLPLSMDVRAPPAVMAAVDQA   99 (277)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999999887777777775543 568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  145 (277)
T 4fc7_A          100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSR  145 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999764  34478999999999999999999875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=4.9e-26  Score=164.51  Aligned_cols=118  Identities=25%  Similarity=0.300  Sum_probs=108.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   79 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTW   79 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999988888888888776  6789999999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|+||||||+..  +..+.+.++|++++++|+.|++++++
T Consensus        80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (264)
T 3tfo_A           80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIG  121 (264)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999864  33478999999999999999998875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.94  E-value=3.6e-26  Score=165.31  Aligned_cols=119  Identities=24%  Similarity=0.277  Sum_probs=104.7

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++.+++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++
T Consensus        21 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           21 SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             chhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999877666655544     568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (266)
T 3grp_A           96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTR  141 (266)
T ss_dssp             HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999864  34578889999999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.94  E-value=5e-26  Score=162.93  Aligned_cols=119  Identities=25%  Similarity=0.319  Sum_probs=105.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +++++++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++.     .+..++.+|++|++++.++++++
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999777776666653     35678999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+...  ..+.+.++|++.+++|+.|+++++|
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  123 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSK  123 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999998643  3478999999999999999999875

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=4.5e-26  Score=163.40  Aligned_cols=122  Identities=25%  Similarity=0.298  Sum_probs=108.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCC-CeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT-AKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+..++ .++.++.+|++|++++.++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999988888888888776444 688999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+... ..+.+.++|++.+++|+.|++++++
T Consensus        83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  126 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILK  126 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998642 2377889999999999999999875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=1.1e-25  Score=164.21  Aligned_cols=120  Identities=17%  Similarity=0.183  Sum_probs=106.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-------cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-------AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++|+.+       .+++..+++...  +.++.++.+|++|++++.+
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA--GGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH--TSEEEEEECCTTSHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHH
Confidence            4688999999999999999999999999999999999876       345556666665  6789999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++.++++++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  133 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQ  133 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999999999864  34578999999999999999999876

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.93  E-value=8.9e-26  Score=165.62  Aligned_cols=122  Identities=16%  Similarity=0.135  Sum_probs=106.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc------------CccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN------------MAAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      +...+++|++||||+++|||+++|++|+++|++|++++|+            .+.+++..+++...  +.++.++.+|++
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   99 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL--GRRIIASQVDVR   99 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTT
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc--CCceEEEECCCC
Confidence            3456899999999999999999999999999999999987            33445555666554  578999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++++.++++++.+++|++|+||||||+...   ..+.+.++|++.+++|+.|++++++
T Consensus       100 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  158 (299)
T 3t7c_A          100 DFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITAR  158 (299)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999999999999998642   4478999999999999999999876

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=9.5e-26  Score=164.06  Aligned_cols=121  Identities=18%  Similarity=0.170  Sum_probs=105.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc------------CccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN------------MAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      +.++++|++||||+++|||+++|++|+++|++|++++|+            .+..++...++...  +.++.++.+|++|
T Consensus         5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   82 (287)
T 3pxx_A            5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRD   82 (287)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCC
Confidence            456899999999999999999999999999999999987            33344445555544  5789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++++.++++++|+||||||+.....+.+.++|++.+++|+.|++++++
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  137 (287)
T 3pxx_A           83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVH  137 (287)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHH
Confidence            9999999999999999999999999987544557889999999999999999875

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.93  E-value=9.1e-26  Score=164.03  Aligned_cols=121  Identities=21%  Similarity=0.235  Sum_probs=104.7

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC------------ccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM------------AAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      +.++++|++||||+++|||+++|++|+++|++|++++|++            +..++..+.+...  +.++.++.+|++|
T Consensus         5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~   82 (281)
T 3s55_A            5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT--GRRCISAKVDVKD   82 (281)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            4568999999999999999999999999999999999973            2334444455444  5689999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  139 (281)
T 3s55_A           83 RAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIA  139 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999999999999999864  34578999999999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.93  E-value=5.8e-26  Score=165.13  Aligned_cols=124  Identities=16%  Similarity=0.111  Sum_probs=108.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +.+++++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+... +.++.++.+|++|++++.+++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999999998888888888876521 12899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  132 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLK  132 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999742   34478999999999999999999875

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.93  E-value=9.6e-26  Score=163.67  Aligned_cols=122  Identities=18%  Similarity=0.199  Sum_probs=104.8

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-------------CccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-------------MAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-------------~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ++..+++|++||||+++|||+++|++|+++|++|++++|+             .+..++..+.+...  +.++.++.+|+
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~   82 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA--NRRIVAAVVDT   82 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCT
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCC
Confidence            4456899999999999999999999999999999999983             33445555555554  57899999999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           90 SSLASVRKFASDFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++++.++++++.++++++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus        83 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  141 (277)
T 3tsc_A           83 RDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVM  141 (277)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHH
Confidence            99999999999999999999999999998743  3378999999999999999999875

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.93  E-value=7.4e-26  Score=164.57  Aligned_cols=117  Identities=26%  Similarity=0.276  Sum_probs=104.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVA   99 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999977766666555     56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       100 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  143 (277)
T 3gvc_A          100 AFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTK  143 (277)
T ss_dssp             HHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  44578999999999999999999875

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.93  E-value=4.8e-26  Score=163.73  Aligned_cols=119  Identities=21%  Similarity=0.208  Sum_probs=108.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.++
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF--PGQILTVQMDVRNTDDIQKMIEQIDEK   80 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS--TTCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988888888777654  568999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  123 (257)
T 3imf_A           81 FGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQ  123 (257)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999764  34478999999999999999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.93  E-value=1.1e-25  Score=164.00  Aligned_cols=122  Identities=19%  Similarity=0.168  Sum_probs=104.8

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc----------------CccchHHHHHHHhhCCCCeeEEEE
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN----------------MAAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      ++..+++|++||||+++|||+++|++|+++|++|++++|+                .+.+++..+++...  +.++.++.
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~   82 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH--NRRIVTAE   82 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT--TCCEEEEE
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc--CCceEEEE
Confidence            4456899999999999999999999999999999999987                23344445555444  56899999


Q ss_pred             ecCCCHHHHHHHHHHHHhcCCCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           87 LDLSSLASVRKFASDFTTKGLPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++++.++++++.+++|++|+||||||+...   ..+.+.++|++.+++|+.|+++++|
T Consensus        83 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  145 (286)
T 3uve_A           83 VDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVK  145 (286)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999999999999999998642   3368999999999999999999876

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.93  E-value=2.1e-25  Score=160.83  Aligned_cols=125  Identities=19%  Similarity=0.256  Sum_probs=110.5

Q ss_pred             cccCCCCCCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ...+..+++|++||||++ +|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|++++.+++
T Consensus        14 ~~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~   92 (266)
T 3o38_A           14 IDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALI   92 (266)
T ss_dssp             CCCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHH
Confidence            334557899999999998 599999999999999999999999888888888886553 468999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus        93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  141 (266)
T 3o38_A           93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATR  141 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999998643  3468999999999999999999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.93  E-value=9.9e-26  Score=162.17  Aligned_cols=119  Identities=21%  Similarity=0.296  Sum_probs=105.1

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ++..+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~   76 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI-----GPAAYAVQMDVTRQDSIDAAIAAT   76 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCCceEEEeeCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999877766666655     456889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        77 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (259)
T 4e6p_A           77 VEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQ  122 (259)
T ss_dssp             HHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999864  34478999999999999999999875

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.93  E-value=8.8e-26  Score=162.69  Aligned_cols=121  Identities=26%  Similarity=0.312  Sum_probs=109.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +..+++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.
T Consensus        24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA--GGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh--CCceeEEEecCCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999988888888888765  6789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  147 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLR  147 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999832   34468999999999999999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.93  E-value=2.5e-25  Score=161.36  Aligned_cols=120  Identities=23%  Similarity=0.230  Sum_probs=106.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-------chHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-------GTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      +++++|+++|||+++|||+++|++|+++|++|++++|+.+.       +++..+++...  +.++.++.+|++|++++.+
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~   79 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA--GGQGLALKCDIREEDQVRA   79 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH--TSEEEEEECCTTCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc--CCeEEEEeCCCCCHHHHHH
Confidence            46889999999999999999999999999999999998754       44555556555  6789999999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++.+++|++|+||||||+..  +..+.+.++|++++++|+.|+++++|
T Consensus        80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  130 (274)
T 3e03_A           80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQ  130 (274)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHH
Confidence            99999999999999999999864  33468999999999999999999876

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.93  E-value=1e-25  Score=161.87  Aligned_cols=118  Identities=25%  Similarity=0.232  Sum_probs=96.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAK   76 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999988776666555     4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCC------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASP------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+....      .+.+.++|++.+++|+.|++++++
T Consensus        77 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  125 (257)
T 3tpc_A           77 QEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIR  125 (257)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999986422      157889999999999999999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.93  E-value=1.6e-25  Score=162.80  Aligned_cols=119  Identities=27%  Similarity=0.322  Sum_probs=105.7

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.+++++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   95 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI-----GSKAFGVRVDVSSAKDAESMVEKT   95 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHH
Confidence            345789999999999999999999999999999999999977666665554     567889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        96 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  141 (277)
T 4dqx_A           96 TAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSK  141 (277)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999864  34578999999999999999998875

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.93  E-value=2e-25  Score=159.61  Aligned_cols=119  Identities=34%  Similarity=0.398  Sum_probs=107.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.++
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~~~~~~~~~~~~   81 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA--GAKVHVLELDVADRQGVDAAVASTVEA   81 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777777777654  567899999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  124 (247)
T 2jah_A           82 LGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTR  124 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999763  34578999999999999999999875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.93  E-value=1.3e-25  Score=163.19  Aligned_cols=121  Identities=19%  Similarity=0.238  Sum_probs=105.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-------------cCccchHHHHHHHhhCCCCeeEEEEecCC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-------------NMAAGTDVKDAIVKEIPTAKVDVLELDLS   90 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-------------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~   90 (147)
                      +..+++|++||||+++|||+++|++|+++|++|++++|             +.+..+++.+++...  +.++.++.+|++
T Consensus        10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~   87 (280)
T 3pgx_A           10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ--GRKALTRVLDVR   87 (280)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT--TCCEEEEECCTT
T ss_pred             ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc--CCeEEEEEcCCC
Confidence            35689999999999999999999999999999999998             344455556666554  678999999999


Q ss_pred             CHHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           91 SLASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++++.++++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  145 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLR  145 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999999999999999864  33478999999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.93  E-value=1.5e-25  Score=162.24  Aligned_cols=120  Identities=26%  Similarity=0.299  Sum_probs=106.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.+++|++||||+++|||+++|++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++|++++.++++++.
T Consensus        24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA--GGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998 445566666777665  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus       102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSR  146 (269)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999998743  3478999999999999999999875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.93  E-value=1.4e-25  Score=162.05  Aligned_cols=122  Identities=22%  Similarity=0.224  Sum_probs=107.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.+..++.++.++.+|++|++++.++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877777777776654456789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  133 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE  133 (267)
T ss_dssp             HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999763   23467899999999999999998765

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.93  E-value=4.6e-26  Score=165.87  Aligned_cols=120  Identities=27%  Similarity=0.248  Sum_probs=108.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+
T Consensus         4 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            4 SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG--GGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT--TCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999988888888877654  57899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  126 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAK  126 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999763   34478999999999999999999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.93  E-value=1.5e-25  Score=164.54  Aligned_cols=120  Identities=21%  Similarity=0.271  Sum_probs=109.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|++||||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|.+++.++++++.+
T Consensus        27 ~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           27 SGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ--GFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999988888888888765  57899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus       105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  148 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVE  148 (301)
T ss_dssp             HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            9999999999999864  33478999999999999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.93  E-value=8.5e-26  Score=163.86  Aligned_cols=118  Identities=27%  Similarity=0.216  Sum_probs=102.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +..+.+|++||||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~   97 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI-----GDDALCVPTDVTDPDSVRALFTATV   97 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999977766666655     4678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  143 (272)
T 4dyv_A           98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQ  143 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999999999863   34478999999999999999999876

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.93  E-value=3.3e-25  Score=158.92  Aligned_cols=121  Identities=22%  Similarity=0.208  Sum_probs=108.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC--CCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL--SSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~  102 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|+  +|.+++.++++++
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET-GRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCCceEEEEecccCCHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999888888887776653 34788899999  9999999999999


Q ss_pred             HhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..   +..+.++++|++.+++|+.|+++++|
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  133 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQ  133 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            999999999999999853   45578999999999999999999876

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.93  E-value=2.2e-25  Score=159.53  Aligned_cols=121  Identities=24%  Similarity=0.272  Sum_probs=109.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.+++|++||||+++|||+++|++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD--GGTAISVAVDVSDPESAKAMADRTL   81 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999988888888888765  6789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC-----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA-----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+.+     +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  129 (253)
T 3qiv_A           82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR  129 (253)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            99999999999999842     34478999999999999999998875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.93  E-value=1.7e-25  Score=161.43  Aligned_cols=123  Identities=20%  Similarity=0.222  Sum_probs=107.3

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      ..++++++|++||||+++|||+++|++|+++|++|++++|..   +..+++.+++...  +.++.++.+|++|++++.++
T Consensus         4 ~~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~   81 (262)
T 3ksu_A            4 TKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKL   81 (262)
T ss_dssp             CCCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHH
Confidence            344678999999999999999999999999999999988753   3455666666655  67899999999999999999


Q ss_pred             HHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           99 ASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        99 ~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  131 (262)
T 3ksu_A           82 FDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIK  131 (262)
T ss_dssp             HHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999864  33478999999999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.93  E-value=3.7e-25  Score=157.87  Aligned_cols=119  Identities=28%  Similarity=0.417  Sum_probs=108.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKAE   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999988888888888765  568999999999999999999999999


Q ss_pred             CCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  122 (247)
T 3lyl_A           80 NLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSK  122 (247)
T ss_dssp             TCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999998743  3368999999999999999998875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.93  E-value=1.2e-25  Score=160.84  Aligned_cols=116  Identities=26%  Similarity=0.316  Sum_probs=104.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999977766666655     567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        78 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  120 (247)
T 3rwb_A           78 TGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTR  120 (247)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999864  33478999999999999999999875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.93  E-value=2.6e-25  Score=160.07  Aligned_cols=120  Identities=18%  Similarity=0.113  Sum_probs=105.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++++|++||||+++|||++++++|+++|++|+++ .++.+..++..+++.+.  +.++.++.+|++|++++.++++++.
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL--GRSALAIKADLTNAAEVEAAISAAA   81 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT--TSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999998 44555566667777655  5688999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||...   +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  127 (259)
T 3edm_A           82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAK  127 (259)
T ss_dssp             HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999752   34578999999999999999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.9e-25  Score=160.98  Aligned_cols=124  Identities=24%  Similarity=0.267  Sum_probs=108.0

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      +...+.+++|++||||+++|||+++|++|+++|++|++++++. +..+++.+++.+.  +.++.++.+|++|++++.+++
T Consensus        23 mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~  100 (271)
T 3v2g_A           23 MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA--GGRAVAIRADNRDAEAIEQAI  100 (271)
T ss_dssp             HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHH
T ss_pred             hccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHH
Confidence            3344578999999999999999999999999999999997764 4456666777665  678999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  149 (271)
T 3v2g_A          101 RETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIR  149 (271)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999999864  33478999999999999999999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=2.9e-25  Score=160.58  Aligned_cols=125  Identities=23%  Similarity=0.323  Sum_probs=106.4

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      .++...+.+|++||||+++|||++++++|+++|++|++++|+.+..++..+++.... +.++.++.+|++|++++.++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCeEEEEEcCCCCHHHHHHHHH
Confidence            344457899999999999999999999999999999999999877777766662222 4678899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  139 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR  139 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999864  33468899999999999999999865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.93  E-value=3.1e-25  Score=160.63  Aligned_cols=119  Identities=26%  Similarity=0.238  Sum_probs=105.7

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +...+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~   79 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV-----GRGAVHHVVDLTNEVSVRALIDFT   79 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH-----CTTCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCCeEEEECCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999988877776666     457888999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+...    ..+.+.++|++.+++|+.|+++++|
T Consensus        80 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (271)
T 3tzq_B           80 IDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCK  127 (271)
T ss_dssp             HHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999998632    2368999999999999999999876

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.3e-25  Score=163.49  Aligned_cols=122  Identities=25%  Similarity=0.275  Sum_probs=105.9

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++..+.+|++||||+++|||+++|++|+++|++|+++++ +.+..++..+++...  +.++.++.+|++|++++.+++++
T Consensus        23 mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           23 MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL--GARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT--TCCEEEEECCTTSGGGHHHHHHH
T ss_pred             hhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHH
Confidence            344688999999999999999999999999999999996 555667777777665  57899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||+.    .+..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  149 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQ  149 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999983    234478999999999999999998875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.9e-25  Score=161.69  Aligned_cols=122  Identities=21%  Similarity=0.196  Sum_probs=105.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.++++|++||||+++|||+++|++|+++|++|++++|+ .+..++..+++.... +.++.++.+|++|++++.++++++
T Consensus        20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS-SGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTC-SSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhcc-CCcEEEEeCCCCCHHHHHHHHHHH
Confidence            456889999999999999999999999999999999994 455666666665542 568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  144 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIR  144 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999864  33468999999999999999999875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.93  E-value=2.1e-25  Score=161.95  Aligned_cols=121  Identities=26%  Similarity=0.308  Sum_probs=109.3

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.+++++|+++|||+++|||+++|++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|.+++.++++++
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS--GGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT--TCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHH
Confidence            335689999999999999999999999999999999999998888888888775  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+. +++|+||||||+..  +..+.++++|++.+++|+.|++++++
T Consensus       105 ~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  149 (275)
T 4imr_A          105 EAI-APVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQ  149 (275)
T ss_dssp             HHH-SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHh-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            887 89999999999764  34478999999999999999999875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.93  E-value=1.3e-25  Score=163.55  Aligned_cols=121  Identities=20%  Similarity=0.203  Sum_probs=103.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|++||||+++|||+++|++|+++|++|++++|+.+..++..+++.+.. +..+.++.+|++|++++.++++++.+
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~  107 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT-GNIVRAVVCDVGDPDQVAALFAAVRA  107 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888877776552 33458999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       108 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  152 (281)
T 4dry_A          108 EFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQ  152 (281)
T ss_dssp             HHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999863   33478999999999999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.93  E-value=1.8e-25  Score=160.70  Aligned_cols=117  Identities=24%  Similarity=0.324  Sum_probs=105.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.+
T Consensus         4 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            4 GNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999977766666555     46789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (255)
T 4eso_A           79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQ  122 (255)
T ss_dssp             HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999864  34478999999999999999999875

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.93  E-value=2.4e-25  Score=161.04  Aligned_cols=120  Identities=30%  Similarity=0.318  Sum_probs=102.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++++|++||||+++|||+++|++|+++|++|+++++ +.+..+++.+++...  +.++.++.+|++|++++.++++++.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA--GGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998855 455566666666665  5789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  145 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLR  145 (267)
T ss_dssp             HHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999864  33478899999999999999999875

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.93  E-value=3.4e-25  Score=160.70  Aligned_cols=119  Identities=19%  Similarity=0.146  Sum_probs=102.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc------------CccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN------------MAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ...+++|++||||+++|||++++++|+++|++|++++|+            .+..++..+.+...  +.++.++.+|++|
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~   85 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI--GSRIVARQADVRD   85 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH--TCCEEEEECCTTC
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc--CCeEEEEeCCCCC
Confidence            346899999999999999999999999999999999987            33445555555554  5789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++++.+++|++|+||||||+....  .+.++|++.+++|+.|++++++
T Consensus        86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~N~~g~~~l~~  138 (278)
T 3sx2_A           86 RESLSAALQAGLDELGRLDIVVANAGIAPMS--AGDDGWHDVIDVNLTGVYHTIK  138 (278)
T ss_dssp             HHHHHHHHHHHHHHHCCCCEEEECCCCCCCS--STHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999999986432  2689999999999999999876

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.93  E-value=6.3e-25  Score=164.21  Aligned_cols=122  Identities=20%  Similarity=0.215  Sum_probs=107.8

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-------chHHHHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-------GTDVKDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      ....+++|++||||+++|||+++|++|+++|++|++++|+.+.       +.+..+++...  +.++.++.+|++|++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~--g~~~~~~~~Dv~d~~~v  116 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV--GGKALPCIVDVRDEQQI  116 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT--TCEEEEEECCTTCHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc--CCeEEEEEccCCCHHHH
Confidence            3356899999999999999999999999999999999998764       34556666655  67899999999999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++.+++|++|+||||||+..  +..+.+.++|++++++|+.|+++++|
T Consensus       117 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  169 (346)
T 3kvo_A          117 SAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASK  169 (346)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999864  44578999999999999999999876

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.93  E-value=6.6e-25  Score=157.88  Aligned_cols=121  Identities=30%  Similarity=0.335  Sum_probs=107.6

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.
T Consensus         4 ~~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   81 (260)
T 2ae2_A            4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   81 (260)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            34588999999999999999999999999999999999987777777777654  5688999999999999999999999


Q ss_pred             hcC-CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKG-LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++ +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  127 (260)
T 2ae2_A           82 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSV  127 (260)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999 89999999999764  23468899999999999999999875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=4.1e-26  Score=166.68  Aligned_cols=122  Identities=26%  Similarity=0.382  Sum_probs=111.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC---EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV---HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..+++|++||||+++|||+++|++|+++|+   +|++++|+.+..+++.+++....++.++.++.+|++|++++.+++++
T Consensus        29 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  108 (287)
T 3rku_A           29 ERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIEN  108 (287)
T ss_dssp             HHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred             hhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999988   99999999888888888888776677899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  156 (287)
T 3rku_A          109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQ  156 (287)
T ss_dssp             SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999753   34578999999999999999999876

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.93  E-value=2e-25  Score=158.69  Aligned_cols=115  Identities=21%  Similarity=0.141  Sum_probs=100.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |.+|++||||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.+++
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~   75 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-----GNAVIGIVADLAHHEDVDVAFAAAVEWG   75 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            35799999999999999999999999999999999987777666665     2368899999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  117 (235)
T 3l6e_A           76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQ  117 (235)
T ss_dssp             CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999864  34478999999999999999999875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.93  E-value=3.4e-25  Score=160.33  Aligned_cols=122  Identities=20%  Similarity=0.257  Sum_probs=107.0

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++..+++|++||||+++|||++++++|+++|++|++++++. +..+++.+++...  +.++.++.+|++|++++.+++++
T Consensus        12 ~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           12 IPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL--GSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             CTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHH
Confidence            34568999999999999999999999999999999987754 4456666777665  67899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  136 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAR  136 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999864  33478999999999999999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=3.9e-25  Score=163.45  Aligned_cols=121  Identities=20%  Similarity=0.218  Sum_probs=104.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc------------CccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN------------MAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      +..+++|++||||+++|||+++|++|+++|++|++++|+            .+.+++..+.+...  +.++.++.+|++|
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d  118 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ--GRRIIARQADVRD  118 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT--TCCEEEEECCTTC
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc--CCeEEEEECCCCC
Confidence            346899999999999999999999999999999999886            23334444555444  5789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       119 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  175 (317)
T 3oec_A          119 LASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACR  175 (317)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999999999999864  34578999999999999999999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.93  E-value=4.5e-25  Score=157.68  Aligned_cols=118  Identities=22%  Similarity=0.269  Sum_probs=104.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.+|++||||+++|||++++++|+++|++|+++++.. +..+++.+++...  +.++.++.+|++|++++.++++++.++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK--GVDSFAIQANVADADEVKAMIKEVVSQ   79 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5689999999999999999999999999999988854 5566667777665  678999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  122 (246)
T 3osu_A           80 FGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQ  122 (246)
T ss_dssp             HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999864  34578999999999999999999875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.93  E-value=1e-24  Score=159.47  Aligned_cols=120  Identities=23%  Similarity=0.313  Sum_probs=103.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH-HHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD-VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+++|++||||+++|||++++++|+++|++|++++|+.+...+ ..+.+...  +.++.++.+|++|++++.++++++.
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~  120 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE--GVKCVLLPGDLSDEQHCKDIVQETV  120 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999998764333 33444433  5789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  166 (291)
T 3ijr_A          121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTK  166 (291)
T ss_dssp             HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999763   23467999999999999999999875

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.93  E-value=9.8e-25  Score=158.46  Aligned_cols=119  Identities=24%  Similarity=0.321  Sum_probs=106.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.+.  +.++.++.+|++|++++.++++++.++
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987777777777654  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  139 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK  139 (277)
T ss_dssp             TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999764  23468899999999999999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.93  E-value=4.1e-25  Score=159.17  Aligned_cols=119  Identities=22%  Similarity=0.227  Sum_probs=106.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   81 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999987777777777654  567899999999999999999999999


Q ss_pred             CCCccEEEEccccC-C--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIM-A--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~-~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+. .  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  125 (262)
T 1zem_A           82 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLK  125 (262)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999976 2  34478899999999999999998875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.93  E-value=2.7e-25  Score=159.97  Aligned_cols=118  Identities=21%  Similarity=0.270  Sum_probs=105.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++|++||||+++|||++++++|+++|++|+++ +|+.+..++..+++.+.  +.++.++.+|++|++++.++++++.++
T Consensus         2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (258)
T 3oid_A            2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL--GVKVLVVKANVGQPAKIKEMFQQIDET   79 (258)
T ss_dssp             -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999886 78877777777777665  578999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  122 (258)
T 3oid_A           80 FGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQ  122 (258)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999753  34478999999999999999999875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.92  E-value=4.4e-25  Score=163.43  Aligned_cols=122  Identities=21%  Similarity=0.205  Sum_probs=108.2

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc----------CccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN----------MAAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~----------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ++..+++|++||||+++|||+++|++|+++|++|++++|+          .+..++..+++...  +.++.++.+|++|+
T Consensus        21 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           21 SMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA--GGEAVADGSNVADW   98 (322)
T ss_dssp             -CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT--TCEEEEECCCTTSH
T ss_pred             hhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc--CCcEEEEECCCCCH
Confidence            3456899999999999999999999999999999999987          56667777777665  57899999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++.+++|++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  154 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMR  154 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999999999998643  3478999999999999999998875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.92  E-value=7.4e-25  Score=160.55  Aligned_cols=125  Identities=10%  Similarity=0.083  Sum_probs=104.7

Q ss_pred             cccccCCCCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           19 EEVTQGIDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        19 ~~~~~~~~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      .++..++.+++|++||||+++  |||+++|++|+++|++|++++|+.+..+.+.+.....   +.+.++.+|++|++++.
T Consensus        20 ~sm~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~   96 (296)
T 3k31_A           20 GSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVD   96 (296)
T ss_dssp             -CCCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHH
T ss_pred             ccccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHH
Confidence            344555678999999999996  9999999999999999999999865444333333332   34688999999999999


Q ss_pred             HHHHHHHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           97 KFASDFTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        97 ~~~~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++.+++|++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        97 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  152 (296)
T 3k31_A           97 NMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIAS  152 (296)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999863      34478999999999999999999875

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.92  E-value=4.1e-25  Score=159.31  Aligned_cols=122  Identities=18%  Similarity=0.194  Sum_probs=97.1

Q ss_pred             CcccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           18 AEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        18 ~~~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ..+.+.++++++|++||||+++|||+++|++|+++|++|++++|+.+...   +.+...    .+.++.+|++|++++.+
T Consensus        16 ~~~~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~----~~~~~~~Dv~~~~~v~~   88 (260)
T 3gem_A           16 NLYFQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV---TELRQA----GAVALYGDFSCETGIMA   88 (260)
T ss_dssp             -----------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH---HHHHHH----TCEEEECCTTSHHHHHH
T ss_pred             CcccccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH---HHHHhc----CCeEEECCCCCHHHHHH
Confidence            33344556799999999999999999999999999999999999876543   333332    26788999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++.++++++|+||||||+... ..+.++++|++.+++|+.|++++++
T Consensus        89 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  138 (260)
T 3gem_A           89 FIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINL  138 (260)
T ss_dssp             HHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998643 3467889999999999999999875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.92  E-value=6.8e-25  Score=162.35  Aligned_cols=122  Identities=25%  Similarity=0.250  Sum_probs=109.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++.+|++||||+++|||++++++|+++|++|++++|+.++.+++.+++.....+.++.++.+|++|++++.++++++.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (319)
T 3ioy_A            4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEA   83 (319)
T ss_dssp             CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888888887764334899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  127 (319)
T 3ioy_A           84 RFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVT  127 (319)
T ss_dssp             HTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999764  34478899999999999999998875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.92  E-value=1.2e-24  Score=157.68  Aligned_cols=120  Identities=28%  Similarity=0.302  Sum_probs=107.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   94 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVAH   94 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999987777777777654  56788999999999999999999999


Q ss_pred             cC-CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KG-LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++ +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  139 (273)
T 1ae1_A           95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ  139 (273)
T ss_dssp             HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            99 99999999999863  34578999999999999999999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.92  E-value=7.5e-25  Score=157.75  Aligned_cols=121  Identities=19%  Similarity=0.312  Sum_probs=106.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.... +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKF-GVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999777777766665432 35788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  125 (263)
T 3ai3_A           82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLAR  125 (263)
T ss_dssp             HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999764  34578999999999999999998875

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.92  E-value=3.5e-25  Score=156.98  Aligned_cols=118  Identities=25%  Similarity=0.305  Sum_probs=105.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|++++.++++++.++++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQ-GVEVFYHHLDVSKAESVEEFSKKVLERFG   79 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhc-CCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence            36899999999999999999999999999999999888888887776433 56899999999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  120 (235)
T 3l77_A           80 DVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLK  120 (235)
T ss_dssp             SCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999864  34478999999999999999999875

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.92  E-value=6.4e-25  Score=159.47  Aligned_cols=120  Identities=27%  Similarity=0.291  Sum_probs=105.9

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  + ++.++.+|++|++++.++++++.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~-~~~~~~~Dv~d~~~v~~~~~~~~  100 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY--G-DCQAIPADLSSEAGARRLAQALG  100 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTS--S-CEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--C-ceEEEEeeCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999877777666666542  3 78889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  145 (276)
T 2b4q_A          101 ELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQ  145 (276)
T ss_dssp             HHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHH
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999764  34468889999999999999998875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.92  E-value=6.6e-25  Score=156.72  Aligned_cols=118  Identities=25%  Similarity=0.304  Sum_probs=104.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++|+++|||+++|||++++++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++|++++.++++++.++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL--GSDAIAVRADVANAEDVTNMVKQTVDV   79 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999 666666677777654  567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (246)
T 2uvd_A           80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTK  122 (246)
T ss_dssp             HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999764  33468899999999999999998875

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.92  E-value=1.6e-24  Score=155.90  Aligned_cols=121  Identities=19%  Similarity=0.242  Sum_probs=105.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++....++.++.++.+|++|++++.++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877777777765432233788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++ +|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        83 ~~g-id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  125 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGR  125 (260)
T ss_dssp             TTC-CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHH
T ss_pred             hcC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999 999999999764  33468899999999999999998875

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.92  E-value=6.7e-25  Score=157.69  Aligned_cols=118  Identities=25%  Similarity=0.306  Sum_probs=104.7

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|.+++.++++++.
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   78 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI-----GDAALAVAADISKEADVDAAVEAAL   78 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----CCceEEEEecCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999987777666655     5678999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  124 (261)
T 3n74_A           79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTS  124 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999864   22357899999999999999999875

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=9.1e-25  Score=160.19  Aligned_cols=121  Identities=22%  Similarity=0.288  Sum_probs=106.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCC---eeEEEEecCCCHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ++.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++...  +.   ++.++.+|++|++++.++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~~Dv~d~~~v~~~~~   98 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA--GVPAEKINAVVADVTEASGQDDIIN   98 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCCCceEEEEecCCCCHHHHHHHHH
Confidence            34588999999999999999999999999999999999987777777777654  34   78899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCCC----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMAS----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++++|+||||||+...    ..+.+.++|++.+++|+.|++++++
T Consensus        99 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  148 (297)
T 1xhl_A           99 TTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ  148 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHH
Confidence            999999999999999997642    3467899999999999999999875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.92  E-value=1.5e-24  Score=155.48  Aligned_cols=122  Identities=17%  Similarity=0.169  Sum_probs=103.8

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ....+.+|++||||+++|||+++|++|+++|++|++++ ++.+..++..+++...  +.++.++.+|++|.+++.+++++
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~   84 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL--GFDFYASEGNVGDWDSTKQAFDK   84 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCeeEEEecCCCCHHHHHHHHHH
Confidence            33468899999999999999999999999999999988 6666667777777665  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  131 (256)
T 3ezl_A           85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTK  131 (256)
T ss_dssp             HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999864  34578999999999999999999875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.92  E-value=2.5e-24  Score=155.54  Aligned_cols=120  Identities=25%  Similarity=0.357  Sum_probs=105.9

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.+.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++.+..++..+..+.+|+++++++.++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            445789999999999999999999999999999999999988888888888877666788999999999998877665  


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        +++++|+||||||+..+  ..+.+.++|++.+++|+.|+++++|
T Consensus        82 --~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  125 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTR  125 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             --hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence              47899999999998643  3478899999999999999999875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.92  E-value=2.9e-24  Score=156.28  Aligned_cols=122  Identities=22%  Similarity=0.330  Sum_probs=105.6

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..+.+++|++||||+++|||++++++|+++|++|++++|+.+. .+.+.+++.+.  +.++.++.+|++|.+++.+++++
T Consensus        23 ~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~  100 (283)
T 1g0o_A           23 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE  100 (283)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh--CCCeEEEEcCCCCHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998654 44455556554  56789999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  147 (283)
T 1g0o_A          101 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR  147 (283)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999864  23467899999999999999999875

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.92  E-value=6.8e-25  Score=160.64  Aligned_cols=121  Identities=24%  Similarity=0.305  Sum_probs=105.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  103 (147)
                      .++++|++||||+++|||+++|++|+++|++|++++|+.++.++..+++.+.. +.++.++.+|++|+ +++.++++.+.
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~v~~~~~~~~   86 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN-HENVVFHQLDVTDPIATMSSLADFIK   86 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT-CCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCceEEEEccCCCcHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999888888888887653 45799999999998 99999999999


Q ss_pred             hcCCCccEEEEccccCC--------------------------------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--------------------------------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--------------------------------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..                                +..+.+.+++++.+++|+.|++++++
T Consensus        87 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (311)
T 3o26_A           87 THFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTE  161 (311)
T ss_dssp             HHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHH
Confidence            99999999999999863                                12356889999999999999999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=157.89  Aligned_cols=119  Identities=20%  Similarity=0.250  Sum_probs=105.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCC---eeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA---KVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  +.   ++.++.+|++|++++.++++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS--GVSEKQVNSVVADVTTEDGQDQIINST   80 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCCCcceEEEEecCCCHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777777777654  33   7899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+...      ..+.+.++|++.+++|+.|++++++
T Consensus        81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  130 (280)
T 1xkq_A           81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTK  130 (280)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999997642      3367889999999999999999875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.92  E-value=1.4e-24  Score=158.99  Aligned_cols=120  Identities=24%  Similarity=0.202  Sum_probs=103.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++++|++||||+++|||++++++|+++|++|++++|+.+  ..+.+.+.+.+.  +.++.++.+|++|++++.++++++
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~  122 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC--GRKAVLLPGDLSDESFARSLVHKA  122 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT--TCCEEECCCCTTSHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998733  344445555444  578999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  169 (294)
T 3r3s_A          123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQ  169 (294)
T ss_dssp             HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999753   33478999999999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.92  E-value=1.2e-24  Score=156.37  Aligned_cols=120  Identities=17%  Similarity=0.172  Sum_probs=106.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|.+++.++++++.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE--GLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987777777777654  56788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        88 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  132 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTK  132 (260)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753   34468899999999999999998875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.92  E-value=3e-24  Score=155.78  Aligned_cols=123  Identities=28%  Similarity=0.313  Sum_probs=102.8

Q ss_pred             ccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           20 EVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        20 ~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ++...+++++|++||||+++|||+++|++|+++|++|++++|+ +..++..+++...  +.++.++.+|++|.+++.++.
T Consensus        22 ~m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   98 (273)
T 3uf0_A           22 SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG--GGSAEAVVADLADLEGAANVA   98 (273)
T ss_dssp             ---CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             hcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHH
Confidence            3444567999999999999999999999999999999999965 4456666666654  678999999999999999984


Q ss_pred             HHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      + ..++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        99 ~-~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (273)
T 3uf0_A           99 E-ELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSR  146 (273)
T ss_dssp             H-HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             H-HHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHH
Confidence            4 4556789999999999874  33478999999999999999999876

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.92  E-value=1.2e-24  Score=156.86  Aligned_cols=123  Identities=24%  Similarity=0.270  Sum_probs=108.0

Q ss_pred             cCCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        23 ~~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++++++|+++|||++  +|||++++++|+++|++|++++|+.+.. ++..+++.+.. +.++.++.+|++|++++.+++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~   92 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY-GIKAKAYKCQVDSYESCEKLV   92 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH-CCCEECCBCCTTCHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc-CCceeEEecCCCCHHHHHHHH
Confidence            3457899999999999  9999999999999999999999987654 66666666543 568999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        93 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  141 (267)
T 3gdg_A           93 KDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAK  141 (267)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHH
Confidence            999999999999999999864  34578999999999999999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.92  E-value=2.1e-24  Score=156.15  Aligned_cols=121  Identities=24%  Similarity=0.362  Sum_probs=105.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+++++|+++|||+++|||+++|++|+++|++|++++|+.+ ..+.+.+.+.+.  +.++.++.+|++|++++.++++++
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK--GYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999544 345555556554  568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus       102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  147 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCR  147 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHH
Confidence            9999999999999998753  3368899999999999999998875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.92  E-value=1.1e-24  Score=158.57  Aligned_cols=116  Identities=22%  Similarity=0.218  Sum_probs=100.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||+++|||++++++|+++|++|++++|+.+..+++..++     +.++.++.+|++|++++.++++++.++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLAA   76 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999876655544432     567899999999999999999999999


Q ss_pred             CCCccEEEEccccCCC-------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMAS-------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+...       ..+.+.++|++.+++|+.|+++++|
T Consensus        77 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  124 (281)
T 3zv4_A           77 FGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVK  124 (281)
T ss_dssp             HSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999998531       1244567899999999999999876

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.92  E-value=1.9e-24  Score=155.53  Aligned_cols=119  Identities=27%  Similarity=0.273  Sum_probs=104.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++|+++|||+++|||++++++|+++|++|++++|+.+. .+++.+++.... +.++.++.+|++|++++.++++++.++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   80 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhcc-CCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence            678999999999999999999999999999999998876 666666665432 357888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  123 (260)
T 1x1t_A           81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA  123 (260)
T ss_dssp             HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999764  23467899999999999999999875

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.92  E-value=3.3e-24  Score=153.40  Aligned_cols=116  Identities=22%  Similarity=0.249  Sum_probs=101.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+. +..++   .+.+.  +.++.++.+|++|++++.++++++.+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIS   78 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc--CCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999987 44433   34333  46788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  122 (249)
T 2ew8_A           79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK  122 (249)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  23468899999999999999998875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.92  E-value=3e-24  Score=157.17  Aligned_cols=122  Identities=13%  Similarity=0.102  Sum_probs=101.5

Q ss_pred             ccCCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++..+++|++||||++  +|||+++|++|+++|++|++++|+.+. .+..+++.+.  ..++.++.+|++|++++.+++
T Consensus        24 ~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~  100 (293)
T 3grk_A           24 AQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAEE--LGAFVAGHCDVADAASIDAVF  100 (293)
T ss_dssp             ---CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHHH--HTCEEEEECCTTCHHHHHHHH
T ss_pred             cccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHHh--cCCceEEECCCCCHHHHHHHH
Confidence            33456899999999999  559999999999999999999998432 3333444443  246889999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.+++|++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  153 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSR  153 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999863      34478999999999999999999875

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.92  E-value=4.4e-24  Score=153.42  Aligned_cols=121  Identities=24%  Similarity=0.280  Sum_probs=107.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHH---CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLAL---RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ++++|+++|||+++|||++++++|++   +|++|++++|+.+..+++.+++.+..++.++.++.+|++|++++.++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   899999999998878888888876554678999999999999999999999


Q ss_pred             Hh--cCCCcc--EEEEccccCCC----CCC-CCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TT--KGLPLN--ILINNAGIMAS----PFM-LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~--~~~~id--~lv~~ag~~~~----~~~-~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+  .+|++|  +||||||+...    ..+ .+.++|++.+++|+.|++++++
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  135 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS  135 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHH
Confidence            88  778899  99999998532    234 6889999999999999999875

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.92  E-value=2.8e-24  Score=154.26  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=103.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            689999999999999999999999999999999987777777777654  567889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (256)
T 1geg_A           80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ  119 (256)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999764  33468899999999999999998875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.92  E-value=2e-24  Score=157.45  Aligned_cols=125  Identities=24%  Similarity=0.257  Sum_probs=103.4

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCC----HHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSS----LASV   95 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~----~~~~   95 (147)
                      .....++++|++||||+++|||++++++|+++|++|++++|+. +..+++.+++.... +.++.++.+|++|    ++++
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~v   93 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER-SNTAVVCQADLTNSNVLPASC   93 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSCSTTHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhc-CCceEEEEeecCCccCCHHHH
Confidence            3344568999999999999999999999999999999999998 77777777776332 5678999999999    9999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCC--CC-----CC-----CCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMA--SP-----FM-----LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~--~~-----~~-----~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++.++++++|+||||||+..  +.     .+     .+.++|++.+++|+.|++++++
T Consensus        94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  156 (288)
T 2x9g_A           94 EEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTM  156 (288)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999999999763  22     34     7789999999999999999875

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.91  E-value=2.4e-24  Score=155.67  Aligned_cols=120  Identities=19%  Similarity=0.201  Sum_probs=101.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++.+|+++|||+++|||++++++|+++|++|+++++. .+..++...++...  +.++.++.+|++|.+++.++++++.
T Consensus        21 ~~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~   98 (269)
T 3gk3_A           21 SMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA--GRDFKAYAVDVADFESCERCAEKVL   98 (269)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT--TCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999854 44445555555443  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  143 (269)
T 3gk3_A           99 ADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTK  143 (269)
T ss_dssp             HHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999864  34578999999999999999998875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.91  E-value=3.8e-24  Score=153.73  Aligned_cols=116  Identities=21%  Similarity=0.280  Sum_probs=103.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc--chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA--GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~--~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.  .++..+++...  +.++.++.+|++|++++.++++++.+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA--DQKAVFVGLDVTDKANFDSAIDEAAEKL   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999998776  66666666654  5678999999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  121 (258)
T 3a28_C           80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQ  121 (258)
T ss_dssp             TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999999864  23468899999999999999999875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.91  E-value=8.5e-24  Score=152.41  Aligned_cols=122  Identities=14%  Similarity=0.107  Sum_probs=103.6

Q ss_pred             ccCCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .+...+++|++||||++  +|||++++++|+++|++|++++|+.. ..+..+++.+..  +++.++.+|++|++++.+++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~   83 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEF--GSELVFPCDVADDAQIDALF   83 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchh-hHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHH
Confidence            34457899999999998  99999999999999999999999843 444455555553  45889999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC------CCCC-CCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA------SPFM-LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~------~~~~-~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++|+||||||+..      +..+ .+.++|++.+++|+.|++++++
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  137 (271)
T 3ek2_A           84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAK  137 (271)
T ss_dssp             HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHH
Confidence            999999999999999999863      3344 8999999999999999999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.91  E-value=1.9e-24  Score=158.01  Aligned_cols=122  Identities=20%  Similarity=0.200  Sum_probs=103.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHH---------
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA---------   93 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~---------   93 (147)
                      ++++++|++||||+++|||++++++|+++|++|++++ |+.+..+++.+++.+.. +.++.++.+|++|++         
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCCCC----
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhc-CCeeEEEEeecCCccccccccccc
Confidence            3458899999999999999999999999999999999 98877777777776333 468899999999999         


Q ss_pred             --------HHHHHHHHHHhcCCCccEEEEccccCC--CCCCCC--------------HHHHHHhhhhhhhhhhhhcc
Q 044688           94 --------SVRKFASDFTTKGLPLNILINNAGIMA--SPFMLS--------------KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        94 --------~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~--------------~~~~~~~~~~N~~g~~~l~~  146 (147)
                              ++.++++++.++++++|+||||||+..  +..+.+              .++|++.+++|+.|++++++
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  159 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  159 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence                    999999999999999999999999864  334667              89999999999999999875

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.91  E-value=4e-24  Score=152.44  Aligned_cols=121  Identities=25%  Similarity=0.283  Sum_probs=106.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC--CCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL--SSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~--~~~~~~~~~~~~~  102 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.... ..++.++.+|+  ++.+++.++++++
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999888888888887653 34566777777  9999999999999


Q ss_pred             HhcCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  135 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTR  135 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999853   33468999999999999999999875

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.91  E-value=3.5e-24  Score=154.26  Aligned_cols=116  Identities=22%  Similarity=0.247  Sum_probs=101.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.     .++.++.+|++|++++.++++++.++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998766555554442     34788999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  121 (260)
T 1nff_A           79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR  121 (260)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999764  34578899999999999999998765

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=2.2e-24  Score=155.68  Aligned_cols=116  Identities=22%  Similarity=0.225  Sum_probs=98.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++     ..++.++.+|++|++++.++++++.++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   77 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999866554444332     357889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        78 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  120 (263)
T 2a4k_A           78 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR  120 (263)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999864  34478899999999999999999875

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.91  E-value=2.9e-24  Score=159.32  Aligned_cols=119  Identities=24%  Similarity=0.333  Sum_probs=100.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-----ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-----AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-----~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.     +..+++.+.+...  +.++.++.+|++|++++.++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~--~~~~~~~~~Dvtd~~~v~~~~~   79 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN--DVDLRTLELDVQSQVSVDRAID   79 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHH
Confidence            46789999999999999999999999999999998863     2234444444444  5689999999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  127 (324)
T 3u9l_A           80 QIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNR  127 (324)
T ss_dssp             HHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999999764  44578999999999999999999875

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.91  E-value=3.4e-24  Score=155.08  Aligned_cols=119  Identities=28%  Similarity=0.274  Sum_probs=103.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +..+|++||||+++|||+++|++|+++|++|+++ .|+.+..+++.+++...  +.++.++.+|++|.+++.++++++.+
T Consensus        23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~  100 (272)
T 4e3z_A           23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES--GGEAVAIPGDVGNAADIAAMFSAVDR  100 (272)
T ss_dssp             -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999887 66666667777777665  57899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus       101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  145 (272)
T 4e3z_A          101 QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAA  145 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHH
Confidence            9999999999999864   23367999999999999999998764

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.91  E-value=9.7e-24  Score=153.68  Aligned_cols=122  Identities=25%  Similarity=0.239  Sum_probs=107.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~d~~~v~~~~~~~  115 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKI  115 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc--CCceeEEECCCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999998877777777777654  567889999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus       116 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  161 (285)
T 2c07_A          116 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ  161 (285)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999864  34468899999999999999998865

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.91  E-value=2e-24  Score=155.62  Aligned_cols=115  Identities=19%  Similarity=0.308  Sum_probs=101.1

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      .+.++.+++|++||||+++|||++++++|+++|++|++++|+.+...           ..++.++.+|++|++++.++++
T Consensus        20 ~~~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dv~d~~~v~~~~~   88 (260)
T 3un1_A           20 FQSMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-----------DPDIHTVAGDISKPETADRIVR   88 (260)
T ss_dssp             CHHHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-----------STTEEEEESCTTSHHHHHHHHH
T ss_pred             hhhhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------cCceEEEEccCCCHHHHHHHHH
Confidence            33445689999999999999999999999999999999999865432           2368899999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        89 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  136 (260)
T 3un1_A           89 EGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQ  136 (260)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999999864  33478999999999999999999875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.91  E-value=3.7e-24  Score=154.16  Aligned_cols=119  Identities=26%  Similarity=0.314  Sum_probs=101.8

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+.+++|++||||+++|||++++++|+++|++|++++|+.+..++..+++     ..++.++.+|++|++++.++++++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~d~~~v~~~~~~~   80 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL-----ENGGFAVEVDVTKRASVDAAMQKA   80 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hcCCeEEEEeCCCHHHHHHHHHHH
Confidence            345688999999999999999999999999999999999865544443332     236778999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  126 (263)
T 3ak4_A           81 IDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQ  126 (263)
T ss_dssp             HHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999764  23468899999999999999998875

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.91  E-value=9.2e-24  Score=151.41  Aligned_cols=120  Identities=23%  Similarity=0.243  Sum_probs=106.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME--GHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            4588999999999999999999999999999999999977777777777654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..   +..+.+.+++++.+++|+.|++++++
T Consensus        87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  131 (260)
T 3awd_A           87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQ  131 (260)
T ss_dssp             HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHH
Confidence            9999999999999754   33467899999999999999998865

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.91  E-value=3e-24  Score=155.68  Aligned_cols=121  Identities=25%  Similarity=0.282  Sum_probs=100.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh-CCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++... ..+.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (278)
T 1spx_A            3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   82 (278)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999987777766666321 1145788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCC----CHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFML----SKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~----~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.    +.++|++.+++|+.|++++++
T Consensus        83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  130 (278)
T 1spx_A           83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  130 (278)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999763  23355    889999999999999999875

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.91  E-value=6.4e-24  Score=152.73  Aligned_cols=118  Identities=20%  Similarity=0.200  Sum_probs=103.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc-
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK-  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-  105 (147)
                      +++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.++ 
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL--GGQCVPVVCDSSQESEVRSLFEQVDREQ   80 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--SSEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc--CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            67899999999999999999999999999999999987777777777665  568899999999999999999999876 


Q ss_pred             CCCccEEEEccc--cC-------CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAG--IM-------ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag--~~-------~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||  +.       .+..+.+.++|++++++|+.|++++++
T Consensus        81 ~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (260)
T 2qq5_A           81 QGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSV  130 (260)
T ss_dssp             TTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHH
T ss_pred             CCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHH
Confidence            899999999994  32       234577889999999999999988764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.91  E-value=3.6e-24  Score=159.05  Aligned_cols=120  Identities=20%  Similarity=0.215  Sum_probs=103.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCCCCeeEEEEecCCCHH-----------
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA-----------   93 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-----------   93 (147)
                      .+++|++||||+++|||++++++|+++|++|++++ |+.+..+++.+++.... +.++.++.+|++|++           
T Consensus        43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARR-PNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSCBCC-------C
T ss_pred             ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhc-CCeEEEEEeeCCCchhcccccccccc
Confidence            47899999999999999999999999999999999 98877777777776333 467899999999999           


Q ss_pred             ------HHHHHHHHHHhcCCCccEEEEccccCC--CCCCCC--------------HHHHHHhhhhhhhhhhhhcc
Q 044688           94 ------SVRKFASDFTTKGLPLNILINNAGIMA--SPFMLS--------------KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        94 ------~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~--------------~~~~~~~~~~N~~g~~~l~~  146 (147)
                            ++.++++++.++++++|+||||||+..  +..+.+              .++|+..+++|+.|++++++
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  196 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  196 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                  999999999999999999999999864  334566              89999999999999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.91  E-value=4.8e-24  Score=152.90  Aligned_cols=116  Identities=25%  Similarity=0.266  Sum_probs=102.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~   77 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999876666555554     457889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        78 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  120 (253)
T 1hxh_A           78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ  120 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHH
Confidence            999999999999864  34578899999999999999998765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=7.4e-24  Score=153.35  Aligned_cols=122  Identities=24%  Similarity=0.236  Sum_probs=107.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++
T Consensus        25 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~v~~~~~~~  102 (272)
T 1yb1_A           25 RRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKV  102 (272)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc--CCeEEEEEeeCCCHHHHHHHHHHH
Confidence            345689999999999999999999999999999999999987777777777665  568899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+...  ..+.+.+++++.+++|+.|++++++
T Consensus       103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  148 (272)
T 1yb1_A          103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK  148 (272)
T ss_dssp             HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999998642  3356788999999999999998765

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.91  E-value=6.1e-24  Score=154.24  Aligned_cols=116  Identities=22%  Similarity=0.278  Sum_probs=102.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|++||||+++|||++++++|+++|++|++++|+.+..+++..++     +.++.++.+|++|.+++.++++++.++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   76 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLAR   76 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999987766655433     457889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|+..+++|+.|++++++
T Consensus        77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (281)
T 3m1a_A           77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTR  119 (281)
T ss_dssp             HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999863  44578999999999999999998875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.91  E-value=7.1e-24  Score=152.11  Aligned_cols=116  Identities=26%  Similarity=0.260  Sum_probs=101.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++|++||||+++|||++++++|+++|++|++++|+.+  ++..+++...  +.++.++.+|++|++++.++++++.+++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~   77 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH--GVKAVHHPADLSDVAQIEALFALAEREF   77 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT--SCCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc--CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            67899999999999999999999999999999999866  4455556543  4678899999999999999999999999


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        78 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  119 (255)
T 2q2v_A           78 GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTR  119 (255)
T ss_dssp             SSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999764  23467899999999999999998865

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.91  E-value=1.3e-23  Score=151.40  Aligned_cols=122  Identities=10%  Similarity=0.099  Sum_probs=103.9

Q ss_pred             CCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+++++|++||||++  +|||+++|++|+++|++|++++|+.+. .+...++.+..+..++.++.+|++|++++.+++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            356899999999999  669999999999999999999998543 34444454444344799999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..      +..+.+.++++..+++|+.|++++++
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  131 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVK  131 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHH
Confidence            9999999999999999863      33468999999999999999998875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.91  E-value=5e-24  Score=152.92  Aligned_cols=116  Identities=22%  Similarity=0.215  Sum_probs=100.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   76 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999999866555444333     457888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (254)
T 1hdc_A           77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK  119 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999764  23467899999999999999998765

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=1.4e-23  Score=150.62  Aligned_cols=114  Identities=23%  Similarity=0.285  Sum_probs=99.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+. ++..+++     . + .++.+|++|++++.++++++.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----~-~-~~~~~D~~~~~~~~~~~~~~~~   73 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----G-G-AFFQVDLEDERERVRFVEEAAY   73 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----T-C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----h-C-CEEEeeCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999998766 5444444     2 3 6789999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  117 (256)
T 2d1y_A           74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA  117 (256)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999764  34578899999999999999999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.91  E-value=3.7e-24  Score=155.25  Aligned_cols=118  Identities=24%  Similarity=0.248  Sum_probs=101.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..++ |++||||+++|||++++++|+++|++|++++|+.+..+++.+++...   .++.++.+|++|++++.++++++.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~   93 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPE   93 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            3456 99999999999999999999999999999999977776666666432   4788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  138 (272)
T 2nwq_A           94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTR  138 (272)
T ss_dssp             GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999753   33468899999999999999998875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.91  E-value=6.1e-24  Score=151.76  Aligned_cols=114  Identities=20%  Similarity=0.254  Sum_probs=98.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +  +.++.+|++|++++.++++++.++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~--~~~~~~D~~~~~~~~~~~~~~~~~   74 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----G--AHPVVMDVADPASVERGFAEALAH   74 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----C--CEEEEecCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999865544433221     2  678899999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  117 (245)
T 1uls_A           75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK  117 (245)
T ss_dssp             HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999764  23467899999999999999999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.91  E-value=7e-24  Score=153.57  Aligned_cols=120  Identities=18%  Similarity=0.151  Sum_probs=100.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCH----HHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSL----ASVRKFAS  100 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~----~~~~~~~~  100 (147)
                      .+++|++||||+++|||++++++|+++|++|++++| +.+..+++.+++.+.. +.++.++.+|++|+    +++.++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhc-CCceEEEeccCCCccccHHHHHHHHH
Confidence            467899999999999999999999999999999999 7777777777776542 35788999999999    99999999


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCH-----------HHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSK-----------DNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~-----------~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++++|+||||||+..  +..+.+.           ++|++.+++|+.|++++++
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  145 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIR  145 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHH
Confidence            99999999999999999764  3345667           8999999999999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.91  E-value=2.4e-23  Score=150.88  Aligned_cols=121  Identities=18%  Similarity=0.161  Sum_probs=105.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+.+...  +.++.++.+|++|.+++.++++++.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~  106 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQE  106 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999999987777666666554  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC---CCC-CCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA---SPF-MLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~---~~~-~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..   +.. +.+.++|++.+++|+.|++++++
T Consensus       107 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  153 (279)
T 3ctm_A          107 KDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSH  153 (279)
T ss_dssp             HHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999763   233 67789999999999999987764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.91  E-value=1.7e-23  Score=151.71  Aligned_cols=118  Identities=14%  Similarity=0.157  Sum_probs=102.8

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++|+++|||++  +|||++++++|+++|++|++++|+.+ .++..+++.+..  +.+.++.+|++|++++.++++++.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   79 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQEL--NSPYVYELDVSKEEHFKSLYNSVK   79 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhc--CCcEEEEcCCCCHHHHHHHHHHHH
Confidence            4789999999999  99999999999999999999999876 555556665543  247889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  128 (275)
T 2pd4_A           80 KDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTN  128 (275)
T ss_dssp             HHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999863      23378899999999999999999875

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.91  E-value=1.7e-23  Score=151.77  Aligned_cols=121  Identities=24%  Similarity=0.224  Sum_probs=106.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++.......++.++.+|++|++++.++++++.++
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            47899999999999999999999999999999999998777777777766532357889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus       109 ~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  151 (279)
T 1xg5_A          109 HSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTR  151 (279)
T ss_dssp             HCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999764  33467899999999999999988764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.91  E-value=2.2e-23  Score=148.38  Aligned_cols=121  Identities=26%  Similarity=0.310  Sum_probs=105.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.... +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKY-GVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhc-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998777766666665422 45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||....  ..+.+.+++++.+++|+.|++++++
T Consensus        82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (248)
T 2pnf_A           82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQ  125 (248)
T ss_dssp             HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHH
Confidence            99999999999997642  3467889999999999999988764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.91  E-value=1.3e-23  Score=150.24  Aligned_cols=119  Identities=22%  Similarity=0.288  Sum_probs=105.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc-CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~-~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+ .+..+++.+++...  +.++.++.+|++|++++.++++++.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD--GGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4788999999999999999999999999999999998 77777777777665  56899999999999999999999999


Q ss_pred             cCCCccEEEEcccc-CC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGI-MA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~-~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||. ..  +..+.+.+++++.+++|+.|++++++
T Consensus        82 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  126 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTK  126 (258)
T ss_dssp             HHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999999997 32  23467889999999999999998765

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.91  E-value=2.4e-24  Score=157.29  Aligned_cols=115  Identities=45%  Similarity=0.644  Sum_probs=100.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++++++|+++|||+++|||++++++|+++|++|++++|+.++.++..+++     +.++.++.+|++|.+++.++++++
T Consensus        10 ~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           10 DLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             GCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             hccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhc
Confidence            456789999999999999999999999999999999999876555444333     568999999999999999888765


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          +++|+||||||+..+..+.+.++|++.+++|+.|++++++
T Consensus        85 ----~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (291)
T 3rd5_A           85 ----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTN  124 (291)
T ss_dssp             ----CCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHH
T ss_pred             ----CCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence                7899999999988766678889999999999999999875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.91  E-value=4.7e-24  Score=154.20  Aligned_cols=114  Identities=20%  Similarity=0.213  Sum_probs=97.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|++||||+++|||++++++|+++|++|++++|+.+.+++       .. ..++.++.+|++|++++.++++++.+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-------LN-LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-------TC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-------hh-cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998543221       11 34688899999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  127 (266)
T 3p19_A           84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQ  127 (266)
T ss_dssp             HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  34578999999999999999999765

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.90  E-value=1e-23  Score=151.71  Aligned_cols=121  Identities=17%  Similarity=0.263  Sum_probs=99.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+.+|+++|||+++|||++++++|+++|++|++++|+.+...+...+..... +.++.++.+|++|++++.++++++.+
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDV-EERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGG-GGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34567999999999999999999999999999999887654433333332222 46899999999999999999999999


Q ss_pred             cCCCccEEEEcccc--CC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGI--MA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~--~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+  ..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  127 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK  127 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHH
Confidence            99999999999994  32  33468899999999999999999875

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.90  E-value=1.2e-23  Score=151.90  Aligned_cols=120  Identities=25%  Similarity=0.278  Sum_probs=102.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+.+|++||||+++|||++++++|+++|++|+++ .|+.+..++..+++.+.  +.++.++.+|++|++++.++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN--GGNGRLLSFDVANREQCREVLEHEI   99 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999665 45656667777777665  5689999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus       100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  144 (267)
T 4iiu_A          100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQ  144 (267)
T ss_dssp             HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999998743  3368999999999999999998765

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.90  E-value=1.7e-23  Score=150.32  Aligned_cols=121  Identities=27%  Similarity=0.370  Sum_probs=104.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+...+..+++.+.. +.++.++.+|++|++++.++++++.+
T Consensus        10 ~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A           10 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc-CCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998766655556665433 45788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  132 (265)
T 1h5q_A           89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR  132 (265)
T ss_dssp             HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHH
Confidence            9999999999999864  23367899999999999999998865

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.90  E-value=2.7e-23  Score=152.03  Aligned_cols=123  Identities=22%  Similarity=0.233  Sum_probs=107.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ....+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.+.. +.++.++.+|++|.+++.++++++
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~   98 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   98 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCceEEEEeCCCCHHHHHHHHHHH
Confidence            3446889999999999999999999999999999999999877777777776542 457899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++|+||||||+..  +..+.+.++++..+++|+.|++++++
T Consensus        99 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  144 (302)
T 1w6u_A           99 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTL  144 (302)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999753  23367899999999999999998864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=9e-24  Score=152.93  Aligned_cols=116  Identities=22%  Similarity=0.326  Sum_probs=100.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++      ..+.++.+|++|++++.++++++.+
T Consensus         5 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~   78 (270)
T 1yde_A            5 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIR   78 (270)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999866554443332      2377899999999999999999999


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  123 (270)
T 1yde_A           79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK  123 (270)
T ss_dssp             HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999753   23467899999999999999999875

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.90  E-value=2e-23  Score=149.18  Aligned_cols=120  Identities=28%  Similarity=0.338  Sum_probs=106.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++...  +.++.++.+|++|++++.++++++.+
T Consensus         7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   84 (255)
T 1fmc_A            7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987777777777654  46788999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||.... ..+.+.+++++.+++|+.|++++++
T Consensus        85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  127 (255)
T 1fmc_A           85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ  127 (255)
T ss_dssp             HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999997642 2367889999999999999998865

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.90  E-value=2.9e-23  Score=149.21  Aligned_cols=118  Identities=19%  Similarity=0.257  Sum_probs=103.3

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++     +.++.++.+|++|++++.++++++.
T Consensus         7 ~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   81 (265)
T 2o23_A            7 CRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAK   81 (265)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999987777666655     4578899999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCC--C------CCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASP--F------MLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~--~------~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+....  .      +.+.++|++.+++|+.|++++++
T Consensus        82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  132 (265)
T 2o23_A           82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR  132 (265)
T ss_dssp             HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999976422  1      36889999999999999998875

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.90  E-value=1e-23  Score=151.31  Aligned_cols=113  Identities=19%  Similarity=0.227  Sum_probs=100.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +|+++|||+++|||++++++|+++|  +.|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.+++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY-----GDRFFYVVGDITEDSVLKQLVNAAVKGH   76 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH-----GGGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh-----CCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence            7999999999999999999999985  78999999877666665554     4678999999999999999999999999


Q ss_pred             CCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  119 (254)
T 3kzv_A           77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVG  119 (254)
T ss_dssp             SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999853   34578999999999999999999875

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.90  E-value=8.3e-24  Score=151.41  Aligned_cols=112  Identities=24%  Similarity=0.377  Sum_probs=98.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|++++.++++++.++++++
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   75 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL-----GDNLYIAQLDVRNRAAIEEMLASLPAEWCNI   75 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999876666655554     3468899999999999999999999999999


Q ss_pred             cEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  115 (248)
T 3asu_A           76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR  115 (248)
T ss_dssp             CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999752   33478899999999999999998875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.90  E-value=1.6e-23  Score=152.09  Aligned_cols=118  Identities=18%  Similarity=0.186  Sum_probs=102.3

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++++++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|++|.+++.++++++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL-----GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999987777666665     467899999999999999999998


Q ss_pred             HhcCCCccEEEEc-cccCCC--C-----CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINN-AGIMAS--P-----FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~-ag~~~~--~-----~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++++++|++||| +|+...  .     .+.+.++|++.+++|+.|++++++
T Consensus        99 -~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  149 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVAR  149 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -HHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence             889999999999 554321  1     257889999999999999998865

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.90  E-value=1.8e-23  Score=149.99  Aligned_cols=119  Identities=21%  Similarity=0.257  Sum_probs=104.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++|++++.++++++.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc--CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999 666666666666654  56888999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+...  ..+.+.+++++.+++|+.|++++++
T Consensus        82 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSR  125 (261)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            99999999999997642  3367889999999999999998764

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=3.1e-23  Score=151.89  Aligned_cols=124  Identities=22%  Similarity=0.248  Sum_probs=107.6

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC---CCCeeEEEEecCCCHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI---PTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ....+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++....   .+.++.++.+|++|++++.+++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            3346889999999999999999999999999999999999877777777776521   1457999999999999999999


Q ss_pred             HHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.++++++|+||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  140 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK  140 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999999999753  23467889999999999999998875

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.90  E-value=2.8e-23  Score=151.26  Aligned_cols=118  Identities=13%  Similarity=0.150  Sum_probs=102.2

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|++||||++  +|||++++++|+++|++|++++|+.+ .++..+++.+..  +.+.++.+|++|++++.++++++.
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   94 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGF--GSDLVVKCDVSLDEDIKNLKKFLE   94 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhc--CCeEEEEcCCCCHHHHHHHHHHHH
Confidence            4889999999999  99999999999999999999999874 455556665543  236788999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        95 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  143 (285)
T 2p91_A           95 ENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTR  143 (285)
T ss_dssp             HHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999763      23368899999999999999999875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.90  E-value=2.3e-23  Score=149.98  Aligned_cols=121  Identities=22%  Similarity=0.226  Sum_probs=105.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.+++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.+++.++++++.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   86 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTVS   86 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999987777777777654  5678899999999999999999999


Q ss_pred             hcC-CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKG-LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++ +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  132 (266)
T 1xq1_A           87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQ  132 (266)
T ss_dssp             HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            888 89999999999764  34467899999999999999998865

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.90  E-value=1.7e-23  Score=151.50  Aligned_cols=112  Identities=26%  Similarity=0.272  Sum_probs=97.0

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +...+++|++||||+++|||+++|++|+++|++|++++|+.+..            ...+..+.+|++|++++.++++++
T Consensus         8 ~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A            8 HMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD------------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc------------cCceeEEEecCCCHHHHHHHHHHH
Confidence            44578999999999999999999999999999999999986543            124667899999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAK  121 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999999864  33468899999999999999999875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.90  E-value=2.1e-23  Score=151.61  Aligned_cols=119  Identities=11%  Similarity=0.112  Sum_probs=102.7

Q ss_pred             CCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +..+++|+++|||++  +|||+++|++|+++|++|++++|+.  ..+..+++.+..  .++.++.+|++|++++.+++++
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~   96 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVE   96 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHH
Confidence            346889999999988  7899999999999999999999987  455666666653  4588999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC------CCC-CCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMAS------PFM-LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~------~~~-~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+...      ..+ .+.++|++.+++|+.|++++++
T Consensus        97 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  148 (280)
T 3nrc_A           97 LGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAK  148 (280)
T ss_dssp             HHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998632      123 8899999999999999999875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.90  E-value=2.3e-23  Score=150.16  Aligned_cols=118  Identities=11%  Similarity=0.162  Sum_probs=101.4

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|++||||++  +|||++++++|+++|++|++++|+. ..++..+++.+..  +...++.+|++|++++.++++++.
T Consensus         6 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            6 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQL--GSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhc--CCcEEEEccCCCHHHHHHHHHHHH
Confidence            3789999999999  9999999999999999999999987 4555556665543  234788999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC------CCC-CCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS------PFM-LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~------~~~-~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+...      ..+ .+.++|++.+++|+.|++++++
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  132 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999997642      225 7889999999999999999875

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.90  E-value=3.5e-23  Score=147.93  Aligned_cols=118  Identities=26%  Similarity=0.318  Sum_probs=102.1

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCee-EEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV-DVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~~~~~~~~~~~~~  101 (147)
                      +++++++|+++|||+++|||++++++|+++|++|++++|+.++.++..+++     +.++ .++.+|++|.+++.+++++
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~   79 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL-----GAAVAARIVADVTDAEAMTAAAAE   79 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEEECCTTCHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----cccceeEEEEecCCHHHHHHHHHH
Confidence            345688999999999999999999999999999999999876666555555     3456 8899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+ ++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~-~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  125 (254)
T 2wsb_A           80 AEA-VAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASR  125 (254)
T ss_dssp             HHH-HSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHh-hCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            988 899999999999764  34467889999999999999998765

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.90  E-value=3.1e-23  Score=149.24  Aligned_cols=118  Identities=11%  Similarity=0.139  Sum_probs=102.0

Q ss_pred             CCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++|+++|||++  +|||++++++|+++|++|++++|+.+ .++..+++.+..  +.+.++.+|++|++++.++++++.
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEAL--GGALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHT--TCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhc--CCcEEEECCCCCHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999999999864 444555565543  247889999999999999999999


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  130 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVAR  130 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99999999999999753      23468899999999999999999875

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.90  E-value=1.5e-23  Score=151.50  Aligned_cols=118  Identities=18%  Similarity=0.183  Sum_probs=100.2

Q ss_pred             CCCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+++|+++|||+  ++|||++++++|+++|++|++++|+.+..   .+++.+.. +.++.++.+|++|++++.++++++
T Consensus         3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~   78 (269)
T 2h7i_A            3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL-PAKAPLLELDVQNEEHLASLAGRV   78 (269)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHhc-CCCceEEEccCCCHHHHHHHHHHH
Confidence            3578999999999  99999999999999999999999986532   22333332 456788999999999999999999


Q ss_pred             HhcCC---CccEEEEccccCC-------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGL---PLNILINNAGIMA-------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~---~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|   ++|+||||||+..       +..+.+.++|++.+++|+.|++++++
T Consensus        79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (269)
T 2h7i_A           79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAK  132 (269)
T ss_dssp             HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            99998   9999999999764       23468899999999999999999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.90  E-value=2.3e-23  Score=148.30  Aligned_cols=119  Identities=22%  Similarity=0.232  Sum_probs=95.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|||+++|||++++++|+++|++|+++ .|+.+..++..+++...  +.++.++.+|++|++++.++++++.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA--GINVVVAKGDVKNPEDVENMVKTAMD   79 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT--TCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999998 56766667777766654  56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  123 (247)
T 2hq1_A           80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTK  123 (247)
T ss_dssp             HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999764  23467788899999999999998765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.90  E-value=4e-23  Score=149.00  Aligned_cols=120  Identities=21%  Similarity=0.271  Sum_probs=105.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++| +.+..+++.+++...  +.++.++.+|++|++++.++++++.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   94 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAV   94 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999 655666666667654  5678899999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        95 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  139 (274)
T 1ja9_A           95 SHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ  139 (274)
T ss_dssp             HHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999764  23367899999999999999998865

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.90  E-value=2.4e-23  Score=149.51  Aligned_cols=122  Identities=22%  Similarity=0.230  Sum_probs=101.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-----CCCeeEEEEecCCCHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-----PTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-----~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++....     +..++.++.+|++|++++.+++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            35789999999999999999999999999999999998776665555443321     0156889999999999999999


Q ss_pred             HHHHhcCCCc-cEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          100 SDFTTKGLPL-NILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~~~~~i-d~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+.++++++ |+||||||....  ..+.+.+++++.+++|+.|++++++
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  132 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQ  132 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHH
Confidence            9999999998 999999997642  3467899999999999999999875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=2.3e-23  Score=150.23  Aligned_cols=115  Identities=27%  Similarity=0.363  Sum_probs=100.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.+...+.++.++.+|++|++++.++++++.++
T Consensus         4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (267)
T 2gdz_A            4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH   83 (267)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999987766666666655433457889999999999999999999999


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..      .++|++.+++|+.|++++++
T Consensus        84 ~g~id~lv~~Ag~~~------~~~~~~~~~~n~~~~~~~~~  118 (267)
T 2gdz_A           84 FGRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTY  118 (267)
T ss_dssp             HSCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC------hhhHHHHHhHHHHHHHHHHH
Confidence            999999999999752      46789999999999988764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.90  E-value=2.8e-23  Score=149.12  Aligned_cols=114  Identities=24%  Similarity=0.234  Sum_probs=93.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++|++||||+++|||++++++|+++|++|++++|+.+   +..+++     +.++.++.+|++|++++.++++.+.
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~---~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~   75 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGE---DVVADL-----GDRARFAAADVTDEAAVASALDLAE   75 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCH---HHHHHT-----CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchH---HHHHhc-----CCceEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999543   222322     5678999999999999999999887


Q ss_pred             hcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      + ++++|+||||||+..      +..+.+.++|++.+++|+.|++++++
T Consensus        76 ~-~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  123 (257)
T 3tl3_A           76 T-MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLR  123 (257)
T ss_dssp             H-HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             H-hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHH
Confidence            7 899999999999753      12358899999999999999999875

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.90  E-value=2.8e-23  Score=149.13  Aligned_cols=113  Identities=20%  Similarity=0.267  Sum_probs=93.6

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+...+++|+++|||+++|||++++++|+++|++|++++|+.+..+             .+.++.+|++|++++.++++
T Consensus        13 ~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~Dl~d~~~v~~~~~   79 (253)
T 2nm0_A           13 GLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-------------GFLAVKCDITDTEQVEQAYK   79 (253)
T ss_dssp             -------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTSHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-------------cceEEEecCCCHHHHHHHHH
Confidence            34445688999999999999999999999999999999999865432             26688999999999999999


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  127 (253)
T 2nm0_A           80 EIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVK  127 (253)
T ss_dssp             HHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999864  33467889999999999999998875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.89  E-value=5.9e-23  Score=148.50  Aligned_cols=119  Identities=21%  Similarity=0.314  Sum_probs=102.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++..   ..++.++.+|++|++++.++++++.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999986655555555422   23788999999999999999999999


Q ss_pred             cCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..    +..+.+.++|++.+++|+.|++++++
T Consensus        89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  134 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAK  134 (278)
T ss_dssp             HHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999763    33467889999999999999998865

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.89  E-value=9.4e-23  Score=148.44  Aligned_cols=120  Identities=23%  Similarity=0.239  Sum_probs=104.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.+.. ..++.++.+|++|.+++.++++++.++
T Consensus        25 ~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           25 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999887777777776552 347889999999999999999999999


Q ss_pred             CCCccEEEEc-cccCC-CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINN-AGIMA-SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~-ag~~~-~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+|||| +|... +..+.+.+++++.+++|+.|++++++
T Consensus       104 ~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  146 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV  146 (286)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHH
Confidence            9999999999 56643 23456889999999999999998765

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.89  E-value=6.6e-23  Score=146.25  Aligned_cols=118  Identities=22%  Similarity=0.251  Sum_probs=102.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++..   ..++.++.+|++|++++.++++++.++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   79 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---cCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999999987666655555532   246889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        80 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  122 (251)
T 1zk4_A           80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR  122 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHH
Confidence            999999999999764  34468899999999999999998764

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.89  E-value=8.3e-23  Score=145.28  Aligned_cols=116  Identities=23%  Similarity=0.324  Sum_probs=103.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +|++||||+++|||++++++|+++|+       +|++++|+.+..+.+.+++...  +.++.++.+|++|++++.+++++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTH   79 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc--CCeeeEEEecCCCHHHHHHHHHH
Confidence            68999999999999999999999999       9999999877777777777654  56899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  126 (244)
T 2bd0_A           80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ  126 (244)
T ss_dssp             HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999999999999864  23367889999999999999998865

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.89  E-value=7.3e-23  Score=145.93  Aligned_cols=117  Identities=22%  Similarity=0.178  Sum_probs=101.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.... +.++.++.+|++|++++.++++++.+++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAY-ADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhc-CCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999999999998776666666652221 457889999999999999999999999999


Q ss_pred             ccEEEEccccCCC-----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS-----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~-----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||+...     ..+.+.+++++.+++|+.|++++++
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  123 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCR  123 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHH
Confidence            9999999997642     2357889999999999999988764

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.89  E-value=1.1e-22  Score=144.48  Aligned_cols=116  Identities=23%  Similarity=0.268  Sum_probs=101.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +|+++|||+++|||++++++|+++|++|+++ +|+.+..+++.+++...  +.++.++.+|++|++++.++++++.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWG   78 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999884 78776666666666654  56888999999999999999999999999


Q ss_pred             CccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||+...  ..+.+.+++++.+++|+.|++++++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  119 (244)
T 1edo_A           79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ  119 (244)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHH
Confidence            99999999998643  2367889999999999999998865

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.89  E-value=9.4e-23  Score=147.14  Aligned_cols=108  Identities=25%  Similarity=0.247  Sum_probs=97.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|++||||+++|||++++++|+++|++|++++|+.+.             +.++.++.+|++|++++.++++++.++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~Dl~~~~~v~~~~~~~~~~   71 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-------------EAKYDHIECDVTNPDQVKASIDHIFKE   71 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-------------SCSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-------------CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998653             246788999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        72 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  114 (264)
T 2dtx_A           72 YGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASK  114 (264)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            999999999999764  34578999999999999999998875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.89  E-value=8.2e-23  Score=146.17  Aligned_cols=119  Identities=24%  Similarity=0.241  Sum_probs=102.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|+++|||+++|||++++++|+++|++|+++ .|+.+..++...++.+.  +.++.++.+|++|.+++.++++++.+
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN--GGSAFSIGANLESLHGVEALYSSLDN   81 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc--CCceEEEecCcCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999885 56666677777777765  67899999999999999999998876


Q ss_pred             cC------CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KG------LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~------~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+      +++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  131 (255)
T 3icc_A           82 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQ  131 (255)
T ss_dssp             HHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHH
Confidence            65      35999999999864  23367999999999999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.89  E-value=3.8e-23  Score=149.44  Aligned_cols=112  Identities=24%  Similarity=0.249  Sum_probs=94.8

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..++.+++|++||||+++|||+++|++|+++|++|++++|+.+...             ....+.+|+++.+++.+++++
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~   87 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGA   87 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHH
Confidence            3445789999999999999999999999999999999999865432             123457899999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        88 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  134 (266)
T 3uxy_A           88 VAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICR  134 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999864  33478999999999999999999876

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.89  E-value=1.4e-22  Score=145.04  Aligned_cols=113  Identities=25%  Similarity=0.322  Sum_probs=97.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~  103 (147)
                      ++++|+++|||+++|||++++++|+++|++ |++++|+.+.  +..+++.+..++.++.++.+|++|+ +++.++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            478999999999999999999999999996 9999998642  3344555544456889999999998 99999999999


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++|+||||||+.      +.+++++.+++|+.|++++++
T Consensus        80 ~~~g~id~lv~~Ag~~------~~~~~~~~~~~N~~g~~~l~~  116 (254)
T 1sby_A           80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTT  116 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHH
T ss_pred             HhcCCCCEEEECCccC------CHHHHhhhheeeehhHHHHHH
Confidence            9999999999999974      456789999999999998875

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.89  E-value=2e-22  Score=145.03  Aligned_cols=118  Identities=25%  Similarity=0.302  Sum_probs=103.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++|++||||+++|||++++++|++ .|++|++++|+.+..++..+++...  +.++.++.+|++|.+++.++++++.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~   79 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKE   79 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc--CCeeEEEECCCCCHHHHHHHHHHHHHh
Confidence            4679999999999999999999999 9999999999987777777777665  467889999999999999999999999


Q ss_pred             CCCccEEEEccccCCCC-CCCC-HHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASP-FMLS-KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~-~~~~-~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+.... ...+ .++++..+++|+.|++++++
T Consensus        80 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  122 (276)
T 1wma_A           80 YGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT  122 (276)
T ss_dssp             HSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHH
Confidence            99999999999976432 2334 58899999999999998865

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.88  E-value=9.4e-23  Score=145.55  Aligned_cols=117  Identities=26%  Similarity=0.351  Sum_probs=91.2

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ......+++|++||||+++|||++++++|+++|++|++++|+.+..+++.+++     ..++.++.+|+++.+++.++++
T Consensus         6 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~   80 (249)
T 3f9i_A            6 HHHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL-----KDNYTIEVCNLANKEECSNLIS   80 (249)
T ss_dssp             ---CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHH
T ss_pred             ccccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh-----ccCccEEEcCCCCHHHHHHHHH
Confidence            34456789999999999999999999999999999999999877766666655     3578889999999999888776


Q ss_pred             HHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +    .+++|++|||||+...  ..+.+.++|++.+++|+.|++++++
T Consensus        81 ~----~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  124 (249)
T 3f9i_A           81 K----TSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNR  124 (249)
T ss_dssp             T----CSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHH
T ss_pred             h----cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            4    4789999999998642  3467889999999999999999875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.88  E-value=3.7e-22  Score=142.84  Aligned_cols=109  Identities=27%  Similarity=0.343  Sum_probs=96.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+.         ..  .. +.++.+|++|++++.++++++.++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~---------~~--~~-~~~~~~D~~d~~~~~~~~~~~~~~   71 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ---------EQ--YP-FATEVMDVADAAQVAQVCQRLLAE   71 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS---------SC--CS-SEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh---------hc--CC-ceEEEcCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999998652         11  12 778899999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        72 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  114 (250)
T 2fwm_X           72 TERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQ  114 (250)
T ss_dssp             CSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            999999999999764  34578999999999999999999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.88  E-value=1.7e-22  Score=144.40  Aligned_cols=109  Identities=22%  Similarity=0.319  Sum_probs=94.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..++             +..+.+|++|++++.++++++.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-------------~~~~~~D~~~~~~~~~~~~~~~~   77 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-------------LFGVEVDVTDSDAVDRAFTAVEE   77 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------------SEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH-------------hcCeeccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998764331             11378999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  121 (247)
T 1uzm_A           78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ  121 (247)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  33578999999999999999999875

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.88  E-value=2.6e-22  Score=144.43  Aligned_cols=122  Identities=22%  Similarity=0.340  Sum_probs=101.3

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCC---CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .....+++|++||||+++|||++++++|+++|   ++|++++|+.+..+.+ .++...  +.++.++.+|++|.+++.++
T Consensus        14 ~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~--~~~~~~~~~Dl~~~~~v~~~   90 (267)
T 1sny_A           14 LVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKN--HSNIHILEIDLRNFDAYDKL   90 (267)
T ss_dssp             ------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHH--CTTEEEEECCTTCGGGHHHH
T ss_pred             ccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhcc--CCceEEEEecCCChHHHHHH
Confidence            33456889999999999999999999999999   9999999998766544 444444  45789999999999999999


Q ss_pred             HHHHHhcCC--CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           99 ASDFTTKGL--PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        99 ~~~~~~~~~--~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++.++++  ++|+||||||+..   +..+.+.++++..+++|+.|++++++
T Consensus        91 ~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  143 (267)
T 1sny_A           91 VADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAK  143 (267)
T ss_dssp             HHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHH
Confidence            999999888  8999999999864   23467889999999999999999875

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.88  E-value=4.3e-22  Score=147.37  Aligned_cols=117  Identities=21%  Similarity=0.289  Sum_probs=99.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc---------cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR---------NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      +++++|+++|||+++|||++++++|+++|++|+++++         +.+..++..+++...  +..+   .+|+++.+++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~~---~~D~~~~~~~   79 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGKA---VANYDSVEAG   79 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCEE---EEECCCGGGH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCeE---EEeCCCHHHH
Confidence            4688999999999999999999999999999999754         455566666777654  3332   4899999999


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++++.++++++|+||||||+...  ..+.+.++|+..+++|+.|++++++
T Consensus        80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  132 (319)
T 1gz6_A           80 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTR  132 (319)
T ss_dssp             HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999999999999998643  3367899999999999999999875

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.88  E-value=2.5e-22  Score=142.67  Aligned_cols=116  Identities=21%  Similarity=0.227  Sum_probs=100.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCCCCeeEE-EEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIPTAKVDV-LELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +|+++|||+++|||++++++|+++|++|+++ +|+.+..+++.+++...  +.++.. +.+|++|.+++.++++++.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL   78 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998 78877667666666654  455666 8999999999999999999999


Q ss_pred             CCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||||||+...  ..+.+.+++++.+++|+.|++++++
T Consensus        79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~  120 (245)
T 2ph3_A           79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTR  120 (245)
T ss_dssp             TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHH
Confidence            999999999997642  3467899999999999999998765

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.88  E-value=3.5e-22  Score=141.29  Aligned_cols=113  Identities=23%  Similarity=0.230  Sum_probs=97.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++      .++.++.+|++|.+++.++++++.+.++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEEAFG   77 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999865554443332      2577889999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||+..  +..+.+.++|+..+++|+.|++++++
T Consensus        78 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  118 (234)
T 2ehd_A           78 ELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIR  118 (234)
T ss_dssp             CCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999764  23467899999999999999987764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.87  E-value=3.4e-22  Score=158.78  Aligned_cols=117  Identities=23%  Similarity=0.267  Sum_probs=98.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC---------ccchHHHHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM---------AAGTDVKDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      +++++|+++|||+++|||+++|+.|+++|++|++++++.         +..+++.+++.+.  +.++   .+|++|.+++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~--g~~~---~~d~~d~~~~   78 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN--GGVA---VADYNNVLDG   78 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT--TCEE---EEECCCTTCH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc--CCeE---EEEcCCHHHH
Confidence            357899999999999999999999999999999998764         4556666777654  4443   3588888888


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++++.+++|++|+||||||+..  +..+++.++|+++|++|+.|+|+++|
T Consensus        79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  131 (604)
T 2et6_A           79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTK  131 (604)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999999999999864  45578999999999999999999876

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.87  E-value=1.1e-21  Score=147.92  Aligned_cols=118  Identities=11%  Similarity=-0.006  Sum_probs=99.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchH------------HHHHHHhhCCCCeeEEEEecCCCH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTD------------VKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .-.+|++||||+++|||+++|+.|++ +|++|++++++.+..+.            +.+.+.+.  +.++..+.+|++|+
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~--G~~a~~i~~Dvtd~  121 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK--GLYAKSINGDAFSD  121 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc--CCceEEEECCCCCH
Confidence            45789999999999999999999999 99999999987654321            23344443  66889999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccC---------------CCC---------------------CCCCHHHHHHhhhh
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIM---------------ASP---------------------FMLSKDNIELQFAT  136 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~  136 (147)
                      +++.++++++.+++|++|+||||||..               .+.                     .+.++++|++++++
T Consensus       122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V  201 (405)
T 3zu3_A          122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV  201 (405)
T ss_dssp             HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence            999999999999999999999999974               122                     46799999999999


Q ss_pred             hhhhhh-hhc
Q 044688          137 NHLGSL-HLH  145 (147)
Q Consensus       137 N~~g~~-~l~  145 (147)
                      |..+++ +++
T Consensus       202 n~~~~~~~~~  211 (405)
T 3zu3_A          202 MGGEDWQMWI  211 (405)
T ss_dssp             HSSHHHHHHH
T ss_pred             hchhHHHHHH
Confidence            999887 443

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.87  E-value=1.2e-21  Score=140.32  Aligned_cols=108  Identities=10%  Similarity=0.097  Sum_probs=92.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ....+|++||||+++|||+++|++|+++|++|++++|+.+...              ...+.+|++|.+++.++++++.+
T Consensus        18 ~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~   83 (251)
T 3orf_A           18 GSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINS   83 (251)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHT
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHH
Confidence            4456899999999999999999999999999999999876422              12568899999999999999999


Q ss_pred             cCCCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+...   ..+.+.+++++.+++|+.|++++++
T Consensus        84 ~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  128 (251)
T 3orf_A           84 KSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAH  128 (251)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999999998642   3467889999999999999998875

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.87  E-value=9.6e-22  Score=139.71  Aligned_cols=115  Identities=26%  Similarity=0.333  Sum_probs=99.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |++|+++|||+++|||++++++|+++|  ++|++++|+.+..+++.+    . .+.++.++.+|++|++++.++++++.+
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   75 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I-KDSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence            457999999999999999999999999  999999998776654422    1 256789999999999999999999999


Q ss_pred             cCC--CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGL--PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~--~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++  ++|+||||||+..   +..+.+.++++..+++|+.|++++++
T Consensus        76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  122 (250)
T 1yo6_A           76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ  122 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHH
Confidence            888  8999999999764   23467889999999999999998765

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.87  E-value=5e-22  Score=141.77  Aligned_cols=110  Identities=18%  Similarity=0.264  Sum_probs=91.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++|+++|||+++|||++++++|+++|++|++++|+.++.+++.     ..  .++.++.+|++|++++.++    .++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~--~~~~~~~~D~~~~~~~~~~----~~~   71 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-----KY--PGIQTRVLDVTKKKQIDQF----ANE   71 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-----GS--TTEEEEECCTTCHHHHHHH----HHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----hc--cCceEEEeeCCCHHHHHHH----HHH
Confidence            478999999999999999999999999999999999865443322     11  2678899999999988744    445


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        72 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~  114 (246)
T 2ag5_A           72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK  114 (246)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            789999999999764  33467899999999999999999875

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.87  E-value=3.9e-22  Score=158.72  Aligned_cols=124  Identities=27%  Similarity=0.274  Sum_probs=89.6

Q ss_pred             CcccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc---------cCccchHHHHHHHhhCCCCeeEEEEec
Q 044688           18 AEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR---------NMAAGTDVKDAIVKEIPTAKVDVLELD   88 (147)
Q Consensus        18 ~~~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r---------~~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (147)
                      .++.....+++||+++|||+++|||+++|++|+++|++|++++|         +.+..+.+.+++.+.  +..+   .+|
T Consensus         8 ~~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~~---~~D   82 (613)
T 3oml_A            8 MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGEA---VAD   82 (613)
T ss_dssp             -------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCCE---EEC
T ss_pred             ccCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCeE---EEE
Confidence            33444556799999999999999999999999999999999987         566677777777665  3333   479


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 LSSLASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|.+++.++++++.+++|++|+||||||+..  +..+.+.++|+.++++|+.|+++++|
T Consensus        83 ~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~  142 (613)
T 3oml_A           83 YNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQ  142 (613)
T ss_dssp             CCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999874  34478999999999999999999876

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.87  E-value=1.1e-21  Score=155.75  Aligned_cols=116  Identities=22%  Similarity=0.288  Sum_probs=98.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||+++|+.|+++|++|+++++.  ..+++.+++.+.  +.++..+.+|++  ++..++++++.+
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~--~~~~~~~~i~~~--g~~~~~~~~Dv~--~~~~~~~~~~~~  391 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAA--GGEAWPDQHDVA--KDSEAIIKNVID  391 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSS--CCHHHHHHHHHT--TCEEEEECCCHH--HHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCc--cHHHHHHHHHhc--CCeEEEEEcChH--HHHHHHHHHHHH
Confidence            36889999999999999999999999999999998863  345666677654  567778888884  456778888889


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..++++++|+++|++|+.|+++++|
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  435 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSR  435 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999864  44578999999999999999999876

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.87  E-value=6.6e-22  Score=140.76  Aligned_cols=109  Identities=11%  Similarity=0.048  Sum_probs=94.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.++|+++|||+++|||++++++|+++|++|++++|+.+..+            ....++.+|++|++++.++++++.++
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~   71 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKL   71 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999865432            23567889999999999999999998


Q ss_pred             C--CCccEEEEccccCC--CC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 G--LPLNILINNAGIMA--SP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~--~~id~lv~~ag~~~--~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +  +++|+||||||+..  +. .+.+.++|++.+++|+.|++++++
T Consensus        72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  117 (241)
T 1dhr_A           72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH  117 (241)
T ss_dssp             HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHH
Confidence            8  79999999999763  23 467889999999999999998875

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.86  E-value=1.4e-21  Score=138.92  Aligned_cols=113  Identities=22%  Similarity=0.344  Sum_probs=93.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.+++|+++|||+++|||++++++|+++|++|++++|+.++.+++.+++    +  ...++.+|++|++++.++++   
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~--~~~~~~~D~~~~~~~~~~~~---   72 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC----P--GIEPVCVDLGDWEATERALG---   72 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----T--TCEEEECCTTCHHHHHHHHT---
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----C--CCCEEEEeCCCHHHHHHHHH---
Confidence            34688999999999999999999999999999999999865544443322    1  24456999999999888776   


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       +++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        73 -~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  116 (244)
T 3d3w_A           73 -SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ  116 (244)
T ss_dssp             -TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             5689999999999764  33467889999999999999998875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.86  E-value=1.6e-21  Score=138.66  Aligned_cols=107  Identities=22%  Similarity=0.232  Sum_probs=93.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+.   ..+++     +  +.++.+|+++ +++.++++++.+++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~-----~--~~~~~~D~~~-~~~~~~~~~~~~~~g~   70 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL-----G--AVPLPTDLEK-DDPKGLVKRALEALGG   70 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH-----T--CEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh-----C--cEEEecCCch-HHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998654   22322     2  6778999999 9999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~  110 (239)
T 2ekp_A           71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQ  110 (239)
T ss_dssp             CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999764  34578999999999999999999875

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.86  E-value=4.9e-21  Score=145.43  Aligned_cols=117  Identities=14%  Similarity=0.010  Sum_probs=97.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchH------------HHHHHHhhCCCCeeEEEEecCCCHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTD------------VKDAIVKEIPTAKVDVLELDLSSLA   93 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~------------~~~~l~~~~~~~~~~~~~~D~~~~~   93 (147)
                      ..+|++||||+++|||+++|+.|++ +|++|++++|+.+..++            +.+.+.+.  +.++..+.+|++|++
T Consensus        59 ~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~--G~~a~~i~~Dvtd~~  136 (422)
T 3s8m_A           59 DGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA--GLYSKSINGDAFSDA  136 (422)
T ss_dssp             SSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTSHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc--CCcEEEEEecCCCHH
Confidence            3589999999999999999999999 99999999998665432            23444444  678899999999999


Q ss_pred             HHHHHHHHHHhcC-CCccEEEEccccC---------------CCC---------------------CCCCHHHHHHhhhh
Q 044688           94 SVRKFASDFTTKG-LPLNILINNAGIM---------------ASP---------------------FMLSKDNIELQFAT  136 (147)
Q Consensus        94 ~~~~~~~~~~~~~-~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~  136 (147)
                      ++.++++++.+++ |++|+||||||..               .+.                     .+.+.++|++++++
T Consensus       137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V  216 (422)
T 3s8m_A          137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV  216 (422)
T ss_dssp             HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence            9999999999999 9999999999872               122                     25789999999999


Q ss_pred             hhhhhh-hhc
Q 044688          137 NHLGSL-HLH  145 (147)
Q Consensus       137 N~~g~~-~l~  145 (147)
                      |..+++ +++
T Consensus       217 n~~~~~~~~~  226 (422)
T 3s8m_A          217 MGGQDWELWI  226 (422)
T ss_dssp             HSSHHHHHHH
T ss_pred             hchhHHHHHH
Confidence            998876 443

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.86  E-value=9.9e-22  Score=139.38  Aligned_cols=108  Identities=12%  Similarity=0.019  Sum_probs=93.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |++|++||||+++|||++++++|+++|++|++++|+.+..+            ....++.+|++|++++.++++++.+++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~   68 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSL   68 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence            36799999999999999999999999999999999876432            235677899999999999999999988


Q ss_pred             --CCccEEEEccccCC--CC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 --LPLNILINNAGIMA--SP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 --~~id~lv~~ag~~~--~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        +++|+||||||+..  +. .+.+.++|++.+++|+.|++++++
T Consensus        69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  113 (236)
T 1ooe_A           69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK  113 (236)
T ss_dssp             TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence              79999999999763  33 466789999999999999998875

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.86  E-value=2.4e-21  Score=137.58  Aligned_cols=112  Identities=23%  Similarity=0.389  Sum_probs=92.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++|+++|||+++|||++++++|+++|++|++++|+.+..+++.++    .  ..+.++.+|++|++++.++++    
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE----C--PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----S--TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh----c--cCCCcEEecCCCHHHHHHHHH----
Confidence            457899999999999999999999999999999999986554443332    1  134556999999999988776    


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+||||||+..  +..+.+.+++++.+++|+.|++++++
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  116 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ  116 (244)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence            5688999999999764  33467889999999999999998865

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.86  E-value=6.9e-22  Score=139.68  Aligned_cols=109  Identities=19%  Similarity=0.267  Sum_probs=92.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |++||||+++|||++++++|+++|++|++++|+.+..+++.+++     +.++.++.+|+++.+++.++++++.+.   .
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~---~   73 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSI---P   73 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSC---C
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhc---C
Confidence            68999999999999999999999999999999876655554443     467889999999999999998876544   3


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  112 (230)
T 3guy_A           74 STVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLR  112 (230)
T ss_dssp             SEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999764  33478999999999999999999875

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.86  E-value=3.1e-21  Score=151.07  Aligned_cols=117  Identities=18%  Similarity=0.232  Sum_probs=102.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEE-EccC-------------ccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVH-VFMA-VRNM-------------AAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ..++++||||+++|||.+++++|+++|++ |+++ +|+.             +..+++.+++.+.  +.++.++.||++|
T Consensus       249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL--GATATVVTCDLTD  326 (525)
T ss_dssp             CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH--TCEEEEEECCTTS
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc--CCEEEEEECCCCC
Confidence            46899999999999999999999999996 7787 8883             4567777778776  6799999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++.++++++. +++++|+||||||+..  +..+.+.+++++++++|+.|++++++
T Consensus       327 ~~~v~~~~~~i~-~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~  382 (525)
T 3qp9_A          327 AEAAARLLAGVS-DAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDR  382 (525)
T ss_dssp             HHHHHHHHHTSC-TTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-hcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999988 7899999999999874  34578999999999999999999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.85  E-value=1e-20  Score=145.84  Aligned_cols=117  Identities=31%  Similarity=0.338  Sum_probs=97.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|++||||+++|||++++++|+++|++|++++|+... +++.+.....    .+.++.||++|.+++.++++++.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~  283 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKV----GGTALTLDVTADDAVDKITAHVTE  283 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHH
Confidence            34689999999999999999999999999999999987432 2222222222    345789999999999999999999


Q ss_pred             cCCC-ccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLP-LNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~-id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++ +|+||||||+...  ..+.+.++|++++++|+.|++++++
T Consensus       284 ~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~  328 (454)
T 3u0b_A          284 HHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTE  328 (454)
T ss_dssp             HSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9986 9999999998753  3478999999999999999999875

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.85  E-value=1.5e-21  Score=144.87  Aligned_cols=117  Identities=21%  Similarity=0.255  Sum_probs=95.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh----CCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE----IPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+|+++|||+++|||++++++|+++|++|++++|+....+...+.+...    .++.++.++.+|++|.+++.++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            3689999999999999999999999999999888765544443333221    12357889999999999999999987 


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .++++|+||||||+..  +..+.+.++|++++++|+.|++++++
T Consensus        80 -~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  123 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ  123 (327)
T ss_dssp             -TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             3589999999999753  33467899999999999999999875

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.85  E-value=5.5e-21  Score=136.19  Aligned_cols=106  Identities=19%  Similarity=0.250  Sum_probs=90.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++|++||||+++|||++++++|++ .|++|++++|+.+..            ...+.++.+|++|++++.++++.+ + 
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~------------~~~~~~~~~Dv~~~~~v~~~~~~~-~-   67 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS------------AENLKFIKADLTKQQDITNVLDII-K-   67 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC------------CTTEEEEECCTTCHHHHHHHHHHT-T-
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc------------cccceEEecCcCCHHHHHHHHHHH-H-
Confidence            3578999999999999999999999 788999999875421            235688999999999999999544 3 


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        68 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  110 (244)
T 4e4y_A           68 NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIK  110 (244)
T ss_dssp             TCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHH
Confidence            789999999999864  45578999999999999999999875

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.85  E-value=2.8e-21  Score=136.06  Aligned_cols=96  Identities=26%  Similarity=0.321  Sum_probs=84.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++|++||||+++|||++++++|+++|++|++++|+.+                      +|++|+++++++++++  
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~--   57 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETI--   57 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHH--
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHh--
Confidence            4578999999999999999999999999999999998743                      8999999999998865  


Q ss_pred             cCCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        +++|+||||||+..   +..+.+.++|++.+++|+.|++++++
T Consensus        58 --g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  100 (223)
T 3uce_A           58 --GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAK  100 (223)
T ss_dssp             --CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             --CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHH
Confidence              78999999999762   44578999999999999999999875

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.84  E-value=1.4e-20  Score=146.34  Aligned_cols=116  Identities=19%  Similarity=0.355  Sum_probs=101.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++++||||+++|||.+++++|+++|+ +|++++|+.   +..+++.+++.+.  +.++.++.||++|.+++.++++++.
T Consensus       238 ~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~i~  315 (496)
T 3mje_A          238 VHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL--GVRVTIAACDAADREALAALLAELP  315 (496)
T ss_dssp             CCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc--CCeEEEEEccCCCHHHHHHHHHHHH
Confidence            359999999999999999999999998 899999964   3456666777765  6799999999999999999999987


Q ss_pred             hcCCCccEEEEccccC-C--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIM-A--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~-~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++ +++|+||||||+. .  +..+.+.++|+++|++|+.|++++.+
T Consensus       316 ~~-g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~  360 (496)
T 3mje_A          316 ED-APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHE  360 (496)
T ss_dssp             TT-SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHH
T ss_pred             Hh-CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            76 7899999999986 3  34578999999999999999998865

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.84  E-value=3e-21  Score=138.36  Aligned_cols=109  Identities=13%  Similarity=0.073  Sum_probs=91.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |++||||+++|||++++++|+++|++|++++|+.+..+.+.+ +...  +.++..+     |.+++.++++++.++++++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~--~~~~~~~-----d~~~v~~~~~~~~~~~g~i   73 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET--YPQLKPM-----SEQEPAELIEAVTSAYGQV   73 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH--CTTSEEC-----CCCSHHHHHHHHHHHHSCC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc--CCcEEEE-----CHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999877666554 5544  3444443     6677888899998889999


Q ss_pred             cEEEEccccC-C--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIM-A--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~-~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||+. .  +..+.+.++|++.+++|+.|++++++
T Consensus        74 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  113 (254)
T 1zmt_A           74 DVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN  113 (254)
T ss_dssp             CEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999986 3  33468899999999999999999875

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.84  E-value=1.1e-21  Score=145.59  Aligned_cols=119  Identities=16%  Similarity=0.185  Sum_probs=93.5

Q ss_pred             CCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccC---------ccchHHHHHHHhh-CCCCeeEEEEecCCCH--H
Q 044688           28 TGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNM---------AAGTDVKDAIVKE-IPTAKVDVLELDLSSL--A   93 (147)
Q Consensus        28 ~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~---------~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~--~   93 (147)
                      .+|++||||+++  |||+++|++|+++|++|+++++++         ++.+......... .....+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            379999999985  999999999999999999887654         1111111111110 0123578889999888  7


Q ss_pred             ------------------HHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           94 ------------------SVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        94 ------------------~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                                        ++.++++++.+++|++|+||||||+.    .+..+.+.++|++++++|+.|++++++
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  155 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence                              99999999999999999999999974    234478999999999999999999876

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.83  E-value=2.2e-20  Score=152.32  Aligned_cols=117  Identities=21%  Similarity=0.354  Sum_probs=103.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHH-HCCC-EEEEEEcc---CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLA-LRGV-HVFMAVRN---MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~-~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      -.+++++|||+++|||+++|++|+ ++|+ +|++++|+   .+..+++.+++++.  +.++.++.||++|++++.+++++
T Consensus       528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--G~~v~~~~~Dvsd~~~v~~~~~~  605 (795)
T 3slk_A          528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY--GAEVSLQACDVADRETLAKVLAS  605 (795)
T ss_dssp             CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHT
T ss_pred             ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHH
Confidence            368999999999999999999999 7999 59999998   34456677777766  78999999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++ +||+||||||+..+  ..+++.++|++++++|+.|++++++
T Consensus       606 ~~~~~-~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~  651 (795)
T 3slk_A          606 IPDEH-PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLE  651 (795)
T ss_dssp             SCTTS-CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHH
T ss_pred             HHHhC-CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            88776 99999999998753  3478999999999999999999876

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.83  E-value=3e-20  Score=156.31  Aligned_cols=122  Identities=20%  Similarity=0.149  Sum_probs=104.4

Q ss_pred             CCCCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSG-IGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+++|++||||+++| ||+++|++|+++|++|+++ +|+.+..++..+++.+..+  +.++.++.+|++|.+++.++++
T Consensus       472 msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe  551 (1688)
T 2pff_A          472 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  551 (1688)
T ss_dssp             CCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHH
T ss_pred             cccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHH
Confidence            4588999999999998 9999999999999999998 5777777777777654332  4589999999999999999999


Q ss_pred             HHHhc-----CC-CccEEEEccccCC---CCCCCC--HHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTK-----GL-PLNILINNAGIMA---SPFMLS--KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~-----~~-~id~lv~~ag~~~---~~~~~~--~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++     +| ++|+||||||+..   +..+.+  .++|+++|++|+.|++++++
T Consensus       552 ~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltq  608 (1688)
T 2pff_A          552 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVK  608 (1688)
T ss_dssp             HHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHH
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            99988     77 9999999999864   234666  89999999999999998764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.83  E-value=5.3e-20  Score=158.11  Aligned_cols=122  Identities=20%  Similarity=0.149  Sum_probs=103.8

Q ss_pred             CCCCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEE-EccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSG-IGAETTRVLALRGVHVFMA-VRNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~-~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+++|++||||+++| ||+++|+.|+++|++|+++ .|+.+..++..+++.+..+  +.++.++.+|++|.+++.++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4689999999999998 9999999999999999998 5776666666666644322  4689999999999999999999


Q ss_pred             HHHhc-----CC-CccEEEEccccCCC---CCCCC--HHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTK-----GL-PLNILINNAGIMAS---PFMLS--KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~-----~~-~id~lv~~ag~~~~---~~~~~--~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++     +| ++|+||||||+...   ..+.+  .++|+++|++|+.|++++++
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~  807 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVK  807 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHH
Confidence            99988     66 99999999998643   34567  89999999999999998764

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.83  E-value=6.3e-20  Score=157.48  Aligned_cols=122  Identities=21%  Similarity=0.178  Sum_probs=102.8

Q ss_pred             CCCCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEE-ccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSG-IGAETTRVLALRGVHVFMAV-RNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~-r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+++|++||||+++| ||+++|++|+++|++|++++ |+.+...+..+++.+...  +.++.++.||++|.+++.++++
T Consensus       648 m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~  727 (1878)
T 2uv9_A          648 LTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVN  727 (1878)
T ss_dssp             BCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence            4689999999999998 99999999999999999986 555555555555533321  5689999999999999999999


Q ss_pred             HHHhc---CC-CccEEEEccccCC---CCCCCC--HHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTK---GL-PLNILINNAGIMA---SPFMLS--KDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~---~~-~id~lv~~ag~~~---~~~~~~--~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.++   +| ++|+||||||+..   +..+.+  .++|+++|++|+.|++++++
T Consensus       728 ~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~  782 (1878)
T 2uv9_A          728 YIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIK  782 (1878)
T ss_dssp             HHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             HHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHH
Confidence            99988   99 9999999999864   334677  79999999999999997753

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.83  E-value=1.1e-19  Score=138.39  Aligned_cols=114  Identities=14%  Similarity=0.019  Sum_probs=95.2

Q ss_pred             CCCCEEEEecCCCchhHH--HHHHHHHCCCEEEEEEccCccc------------hHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           27 ATGLTAIVTGASSGIGAE--TTRVLALRGVHVFMAVRNMAAG------------TDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~--~a~~l~~~g~~v~~~~r~~~~~------------~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ..+|++||||+++|||++  +++.|+++|++|++++|+....            +.+.+...+.  +.++..+.+|++|.
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~  135 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSN  135 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCH
Confidence            679999999999999999  9999999999999999976542            2233333333  56889999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccC---------------CCC---------------------CCCCHHHHHHhhhh
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIM---------------ASP---------------------FMLSKDNIELQFAT  136 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~---------------~~~---------------------~~~~~~~~~~~~~~  136 (147)
                      +++.++++++.+++|++|+||||||..               .+.                     .+.+.++|+..+++
T Consensus       136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v  215 (418)
T 4eue_A          136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV  215 (418)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence            999999999999999999999999974               111                     24689999999999


Q ss_pred             hhhhhh
Q 044688          137 NHLGSL  142 (147)
Q Consensus       137 N~~g~~  142 (147)
                      |..+.+
T Consensus       216 n~~~~~  221 (418)
T 4eue_A          216 MGGEDW  221 (418)
T ss_dssp             HSSHHH
T ss_pred             hhHHHH
Confidence            988776

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.82  E-value=1e-20  Score=134.89  Aligned_cols=107  Identities=16%  Similarity=0.120  Sum_probs=88.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE-E--ccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMA-V--RNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~-~--r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +|+++|||+++|||++++++|+++|++|+++ +  |+.+..+++.+++    .+.       |+.|.+++.++++++.++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~----~~~-------~~~~~~~v~~~~~~~~~~   69 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN----PGT-------IALAEQKPERLVDATLQH   69 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS----TTE-------EECCCCCGGGHHHHHGGG
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh----CCC-------cccCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999 6  8876555554443    122       333777888899999999


Q ss_pred             CCCccEEEEccccCC-----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA-----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~-----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..     +..+.+.++|++.+++|+.|++++++
T Consensus        70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  115 (244)
T 1zmo_A           70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ  115 (244)
T ss_dssp             SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHH
Confidence            999999999999763     33478899999999999999999875

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.82  E-value=2.6e-21  Score=137.93  Aligned_cols=112  Identities=19%  Similarity=0.146  Sum_probs=84.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|++||||+++|||++++++|++ |++|++++|+.+..+++.+       ..++.++.+|+++.+. .+.+.+..++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-------~~~~~~~~~D~~~~~~-~~~~~~~~~~   72 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-------IEGVEPIESDIVKEVL-EEGGVDKLKN   72 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-------STTEEEEECCHHHHHH-TSSSCGGGTT
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-------hcCCcceecccchHHH-HHHHHHHHHh
Confidence            57899999999999999999999988 8999999998655443322       2357889999998876 4455556677


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~  115 (245)
T 3e9n_A           73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSR  115 (245)
T ss_dssp             CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            899999999999864  33467889999999999999998875

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.82  E-value=2.1e-20  Score=137.86  Aligned_cols=122  Identities=20%  Similarity=0.154  Sum_probs=89.7

Q ss_pred             CCCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCc------cch-HHHHHHHhhCCCCe---eEEEEec----
Q 044688           25 IDATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMA------AGT-DVKDAIVKEIPTAK---VDVLELD----   88 (147)
Q Consensus        25 ~~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~------~~~-~~~~~l~~~~~~~~---~~~~~~D----   88 (147)
                      +.+++|+++|||+  ++|||++++++|+++|++|++++|++.      ... ...+++.+...+..   +.++.+|    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            4588999999999  899999999999999999999987531      000 00111111111111   2333443    


Q ss_pred             --------CC--------CHHHHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 --------LS--------SLASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 --------~~--------~~~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                              ++        |++++.++++++.+++|++|+||||||+.    .+..+.+.++|++.+++|+.|+++++|
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                    33        35689999999999999999999999975    234478999999999999999999876

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.82  E-value=3.7e-20  Score=136.73  Aligned_cols=120  Identities=18%  Similarity=0.208  Sum_probs=86.8

Q ss_pred             CCCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccC-----------ccch-----------HHHHHHHhhCCCC
Q 044688           25 IDATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNM-----------AAGT-----------DVKDAIVKEIPTA   80 (147)
Q Consensus        25 ~~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~l~~~~~~~   80 (147)
                      +.+++|++||||+  ++|||+++|++|+++|++|++++|++           +.++           ++.+++.+.  +.
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   82 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK--PV   82 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc--cc
Confidence            4578999999999  89999999999999999999998752           1111           122222221  11


Q ss_pred             ---eeEEEEec------------CCC--------HHHHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHh
Q 044688           81 ---KVDVLELD------------LSS--------LASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQ  133 (147)
Q Consensus        81 ---~~~~~~~D------------~~~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~  133 (147)
                         ...++.+|            ++|        ++++.++++++.+++|++|+||||||+.    .+..+.+.++|++.
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence               02334433            333        4578999999999999999999999965    23457899999999


Q ss_pred             hhhhhhhhhhhcc
Q 044688          134 FATNHLGSLHLHM  146 (147)
Q Consensus       134 ~~~N~~g~~~l~~  146 (147)
                      +++|+.|++++++
T Consensus       163 ~~vN~~g~~~l~~  175 (319)
T 2ptg_A          163 VSSSSYSFVSLLQ  175 (319)
T ss_dssp             HHHHTHHHHHHHH
T ss_pred             HhHhhHHHHHHHH
Confidence            9999999999875

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.81  E-value=1.6e-19  Score=140.35  Aligned_cols=117  Identities=25%  Similarity=0.378  Sum_probs=100.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCc---cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMA---AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..++++||||++||||.+++++|+++|+ +|++++|+..   ..+++.+++...  +.++.++.||++|.+++.++++.+
T Consensus       224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHHHH
Confidence            4579999999999999999999999999 5999999864   345566667665  678999999999999999999988


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+++++|+||||||+...  ..+.+.++++.++++|+.|++++.+
T Consensus       302 -~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~  346 (486)
T 2fr1_A          302 -GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHE  346 (486)
T ss_dssp             -CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHH
T ss_pred             -HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence             667899999999998643  3368999999999999999998865

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.81  E-value=3.9e-20  Score=135.22  Aligned_cols=122  Identities=16%  Similarity=0.144  Sum_probs=89.6

Q ss_pred             CCCCCCCEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccC-----------ccchHHHHHHHhhCCCCeeEEEEec--
Q 044688           24 GIDATGLTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNM-----------AAGTDVKDAIVKEIPTAKVDVLELD--   88 (147)
Q Consensus        24 ~~~~~~~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~-----------~~~~~~~~~l~~~~~~~~~~~~~~D--   88 (147)
                      .+++++|++||||++  +|||+++|++|+++|++|++++|++           ++.+++ +++...........+.+|  
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTT
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhcccccccccccccccee
Confidence            346889999999999  9999999999999999999998752           111111 111100000112333443  


Q ss_pred             ------CC----C--------HHHHHHHHHHHHhcCCCccEEEEccccC----CCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 ------LS----S--------LASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ------~~----~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~----~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                            ++    |        ++++.++++++.+++|++|+||||||+.    .+..+.+.++|++.+++|+.|++++++
T Consensus        82 ~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                  32    2        6688999999999999999999999964    234478999999999999999999876

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.81  E-value=1.4e-19  Score=128.10  Aligned_cols=103  Identities=22%  Similarity=0.308  Sum_probs=88.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +|+++|||+++|||++++++|+++|++|++++|+.+ .             .++.++.+|++|++++.++++++ +++++
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~   66 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARA-QEEAP   66 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHH-HHHSC
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHH-HhhCC
Confidence            689999999999999999999999999999999864 1             23478899999999999999999 88899


Q ss_pred             ccEEEEccccCCC--CCC----CCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMAS--PFM----LSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~--~~~----~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|||||....  ..+    .+.+++++.+++|+.|++++++
T Consensus        67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  110 (242)
T 1uay_A           67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR  110 (242)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHH
Confidence            9999999997642  222    3345999999999999998765

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.81  E-value=5.3e-20  Score=131.63  Aligned_cols=109  Identities=20%  Similarity=0.211  Sum_probs=84.8

Q ss_pred             cccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           21 VTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        21 ~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ..+...+++|+++|||+++|||++++++|+++|++|++++|+.+    ..+++     + ++.++ +|+  .+++.++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----~~~~~-----~-~~~~~-~D~--~~~~~~~~~   77 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE----LLKRS-----G-HRYVV-CDL--RKDLDLLFE   77 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHT-----C-SEEEE-CCT--TTCHHHHHH
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH----HHHhh-----C-CeEEE-eeH--HHHHHHHHH
Confidence            34445789999999999999999999999999999999999852    11211     2 56667 999  456777776


Q ss_pred             HHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.    ++|+||||||+..  +..+.+.++|++.+++|+.|++++++
T Consensus        78 ~~~----~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  121 (249)
T 1o5i_A           78 KVK----EVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR  121 (249)
T ss_dssp             HSC----CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             Hhc----CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            653    7999999999764  23467899999999999999998765

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.78  E-value=2e-18  Score=134.82  Aligned_cols=113  Identities=20%  Similarity=0.295  Sum_probs=96.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCc---cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMA---AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..++++||||++||||.+++++|+++|+ +|++++|+..   ..+++.+++...  +.++.++.||++|.+++.++++. 
T Consensus       257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~--g~~v~~~~~Dvtd~~~v~~~~~~-  333 (511)
T 2z5l_A          257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH--GCEVVHAACDVAERDALAALVTA-  333 (511)
T ss_dssp             CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT--TCEEEEEECCSSCHHHHHHHHHH-
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc--CCEEEEEEeCCCCHHHHHHHHhc-
Confidence            3579999999999999999999999999 6999999864   345566667654  67899999999999999999886 


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          +++|+||||||+...  ..+.+.++++.++++|+.|++++.+
T Consensus       334 ----~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~  375 (511)
T 2z5l_A          334 ----YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQ  375 (511)
T ss_dssp             ----SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence                689999999998643  3468899999999999999998764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.78  E-value=5.1e-19  Score=157.58  Aligned_cols=119  Identities=18%  Similarity=0.132  Sum_probs=97.0

Q ss_pred             CCCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEEccCcc-----chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           26 DATGLTAIVTGASSG-IGAETTRVLALRGVHVFMAVRNMAA-----GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        26 ~~~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++||++||||+++| ||+++|+.|+++|++|++++|+.+.     .+++.+++...  +.++..+.+|++|.+++.+++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~--G~~~~~v~~Dvtd~~~v~~lv 2210 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARF--DATLWVVPANMASYSDIDKLV 2210 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCT--TCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhc--CCeEEEEEecCCCHHHHHHHH
Confidence            489999999999999 9999999999999999999998765     44444444333  568899999999999999999


Q ss_pred             HHHHh----cCCCccEEEEccccC-------CCCCCCCHHHHHHh----hhhhhhhhhhhcc
Q 044688          100 SDFTT----KGLPLNILINNAGIM-------ASPFMLSKDNIELQ----FATNHLGSLHLHM  146 (147)
Q Consensus       100 ~~~~~----~~~~id~lv~~ag~~-------~~~~~~~~~~~~~~----~~~N~~g~~~l~~  146 (147)
                      +++.+    ++|++|+||||||+.       ....+.+.++|+..    +++|+.+++.+++
T Consensus      2211 ~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~ 2272 (3089)
T 3zen_D         2211 EWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLIS 2272 (3089)
T ss_dssp             HHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99998    899999999999972       11223344445444    9999999988764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.78  E-value=6e-19  Score=122.27  Aligned_cols=104  Identities=21%  Similarity=0.338  Sum_probs=85.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||++++++|+++  +|++++|+++..+++.+++     ..  .++.+|++|++++.+++++    ++++
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----~~--~~~~~D~~~~~~~~~~~~~----~~~i   67 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----GA--RALPADLADELEAKALLEE----AGPL   67 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----TC--EECCCCTTSHHHHHHHHHH----HCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----cC--cEEEeeCCCHHHHHHHHHh----cCCC
Confidence            57999999999999999999998  9999999876555554443     12  6788999999999999887    5789


Q ss_pred             cEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        68 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  106 (207)
T 2yut_A           68 DLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLK  106 (207)
T ss_dssp             EEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            99999999764  33467889999999999999998865

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.77  E-value=2.4e-18  Score=118.99  Aligned_cols=92  Identities=16%  Similarity=0.315  Sum_probs=81.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++++||++++++|+ +|++|++++|+.+                   .+.+|++|++++.++++.+    +++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~----~~~d   60 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQV----GKVD   60 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHH----CCEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHh----CCCC
Confidence            79999999999999999999 9999999999753                   3679999999999998875    7899


Q ss_pred             EEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||||||...  +..+.+.+++++.+++|+.|++++++
T Consensus        61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~   98 (202)
T 3d7l_A           61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVL   98 (202)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHH
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHH
Confidence            9999999763  23467889999999999999998875

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.75  E-value=3.8e-18  Score=151.43  Aligned_cols=117  Identities=18%  Similarity=0.164  Sum_probs=89.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccch---HHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGT---DVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+|+++|||+++|||+++|++|+++|++ |++++|+....+   +..+++.+.  +.++.++.||++|.+++.++++++
T Consensus      1882 ~~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dvsd~~~v~~~~~~~ 1959 (2512)
T 2vz8_A         1882 PPHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ--GVQVLVSTSNASSLDGARSLITEA 1959 (2512)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT--TCEEEEECCCSSSHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC--CCEEEEEecCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999996 888999866543   344455444  678999999999999999999998


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+ +|+||+||||||+..  +..+++.++|++++++|+.|++++++
T Consensus      1960 ~~-~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~ 2004 (2512)
T 2vz8_A         1960 TQ-LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDR 2004 (2512)
T ss_dssp             HH-HSCEEEEEECCCC----------------CTTTTHHHHHHHHH
T ss_pred             Hh-cCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHH
Confidence            64 789999999999864  34578999999999999999998854

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.75  E-value=2.1e-18  Score=124.30  Aligned_cols=95  Identities=18%  Similarity=0.172  Sum_probs=82.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++|++||||++|+||++++++|+++|++|++++|+.....           +.++.++.+|++|.+++.++++       
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------   63 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVA-------   63 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHc-------
Confidence            4689999999999999999999999999999999875433           3568899999999999988876       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||..      +.+.++..+++|+.|++++++
T Consensus        64 ~~D~vi~~Ag~~------~~~~~~~~~~~N~~g~~~l~~   96 (267)
T 3rft_A           64 GCDGIVHLGGIS------VEKPFEQILQGNIIGLYNLYE   96 (267)
T ss_dssp             TCSEEEECCSCC------SCCCHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCc------CcCCHHHHHHHHHHHHHHHHH
Confidence            699999999973      335578999999999999875

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.73  E-value=6e-18  Score=119.61  Aligned_cols=106  Identities=16%  Similarity=0.258  Sum_probs=77.4

Q ss_pred             CcccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCee-EEEEecCCCHHHHH
Q 044688           18 AEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV-DVLELDLSSLASVR   96 (147)
Q Consensus        18 ~~~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~~D~~~~~~~~   96 (147)
                      .+...+...+++++++|||++|+||++++++|+++|++|++++|+.+..+++..        ..+ .++.+|++      
T Consensus        10 ~~~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~------   75 (236)
T 3e8x_A           10 HSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE------   75 (236)
T ss_dssp             -----------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT------
T ss_pred             ccccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH------
Confidence            334444567899999999999999999999999999999999998776543322        246 78899998      


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           97 KFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        97 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         +.+.+.++++|+||||||...      .++++..+++|+.+++++++
T Consensus        76 ---~~~~~~~~~~D~vi~~ag~~~------~~~~~~~~~~n~~~~~~l~~  116 (236)
T 3e8x_A           76 ---EDFSHAFASIDAVVFAAGSGP------HTGADKTILIDLWGAIKTIQ  116 (236)
T ss_dssp             ---SCCGGGGTTCSEEEECCCCCT------TSCHHHHHHTTTHHHHHHHH
T ss_pred             ---HHHHHHHcCCCEEEECCCCCC------CCCccccchhhHHHHHHHHH
Confidence               233444568999999999753      24578899999999988764

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.72  E-value=3.2e-18  Score=122.38  Aligned_cols=94  Identities=18%  Similarity=0.202  Sum_probs=77.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+++|||+++|||++++++|+++|++|++++|+.+..+.            .   +.+|++|.+++.++++++   .+++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~---~~~Dl~~~~~v~~~~~~~---~~~i   63 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D---LSTAEGRKQAIADVLAKC---SKGM   63 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C---TTSHHHHHHHHHHHHTTC---TTCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c---cccCCCCHHHHHHHHHHh---CCCC
Confidence            689999999999999999999999999999998765331            1   568999999888877632   3899


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||+..+.     +.+++.+++|+.|++++++
T Consensus        64 d~lv~~Ag~~~~~-----~~~~~~~~~N~~g~~~l~~   95 (257)
T 1fjh_A           64 DGLVLCAGLGPQT-----KVLGNVVSVNYFGATELMD   95 (257)
T ss_dssp             SEEEECCCCCTTC-----SSHHHHHHHHTHHHHHHHH
T ss_pred             CEEEECCCCCCCc-----ccHHHHHHHhhHHHHHHHH
Confidence            9999999975411     2388999999999999875

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.72  E-value=2.5e-17  Score=121.71  Aligned_cols=113  Identities=14%  Similarity=0.194  Sum_probs=86.7

Q ss_pred             CcccccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           18 AEEVTQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        18 ~~~~~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ..+..+...+.++++||||++|+||.+++++|+++|++|++++|+.....+....+      .++.++.+|++|.+++.+
T Consensus         9 ~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l------~~v~~~~~Dl~d~~~~~~   82 (330)
T 2pzm_A            9 HHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV------AGLSVIEGSVTDAGLLER   82 (330)
T ss_dssp             -----CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC------TTEEEEECCTTCHHHHHH
T ss_pred             ccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc------CCceEEEeeCCCHHHHHH
Confidence            33344455788999999999999999999999999999999999754432111111      357788999999999999


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++     ++|+||||||.....   +.++++  +++|+.|++++++
T Consensus        83 ~~~~~-----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~  121 (330)
T 2pzm_A           83 AFDSF-----KPTHVVHSAAAYKDP---DDWAED--AATNVQGSINVAK  121 (330)
T ss_dssp             HHHHH-----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHH
T ss_pred             HHhhc-----CCCEEEECCccCCCc---cccChh--HHHHHHHHHHHHH
Confidence            88876     799999999976432   445666  9999999998765

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.71  E-value=3.8e-17  Score=120.84  Aligned_cols=111  Identities=23%  Similarity=0.149  Sum_probs=90.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .++++||||++|+||.+++++|+++|++|++++|+.+...+..+.+.... +.++.++.+|++|.+++.++++.     +
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~-----~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT-GKTPAFHETDVSDERALARIFDA-----H   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH-SCCCEEECCCTTCHHHHHHHHHH-----S
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc-CCCceEEEeecCCHHHHHHHHhc-----c
Confidence            56899999999999999999999999999999998877766666665432 45788999999999999998886     3


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||....  ....+.....+++|+.++.++++
T Consensus        78 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  114 (341)
T 3enk_A           78 PITAAIHFAALKAV--GESVAKPIEYYRNNLDSLLSLLR  114 (341)
T ss_dssp             CCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEECcccccc--CccccChHHHHHHHHHHHHHHHH
Confidence            79999999997531  12234456788999999888754

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.71  E-value=2.8e-17  Score=121.48  Aligned_cols=111  Identities=18%  Similarity=0.178  Sum_probs=86.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |+++++||||++|+||.+++++|+++|++|++++|+.+....  ..+.......++.++.+|++|.+++.++++..    
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   74 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV----   74 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH----
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc----
Confidence            357899999999999999999999999999999998765432  12222211346888899999999999998876    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+||||||...  .+.+.++++..+++|+.|++++++
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~  111 (345)
T 2z1m_A           75 -QPDEVYNLAAQSF--VGVSFEQPILTAEVDAIGVLRILE  111 (345)
T ss_dssp             -CCSEEEECCCCCC--HHHHTTSHHHHHHHHTHHHHHHHH
T ss_pred             -CCCEEEECCCCcc--hhhhhhCHHHHHHHHHHHHHHHHH
Confidence             7999999999642  122345678899999999998764

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.68  E-value=5.5e-16  Score=116.29  Aligned_cols=93  Identities=15%  Similarity=0.119  Sum_probs=79.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHH-HCCCEEEEEEccCccch------------HHHHHHHhhCCCCeeEEEEecCCC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLA-LRGVHVFMAVRNMAAGT------------DVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~~~------------~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      ....+|++||||+++|||++.+..|+ ..|+.++++++..+..+            ...+.+++.  +.+...+.||++|
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~--G~~a~~i~~Dv~d  123 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE--GLYSVTIDGDAFS  123 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH--TCCEEEEESCTTS
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc--CCCceeEeCCCCC
Confidence            34678999999999999999999999 68999999988754332            234455555  7899999999999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccC
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~  119 (147)
                      .++++++++++.+++|+||+||||+|..
T Consensus       124 ~e~i~~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          124 DEIKAQVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEecccc
Confidence            9999999999999999999999999975

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.67  E-value=1.1e-16  Score=119.24  Aligned_cols=109  Identities=14%  Similarity=0.135  Sum_probs=87.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHC-CC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALR-GV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~-g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++++|++|||||+|+||.+++++|++. |+ +|++++|++.+...+.+.+.    ..++.++.+|++|.+++.++++  
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~--   90 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALE--   90 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTT--
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHh--
Confidence            3578999999999999999999999999 97 99999998765555544442    3478899999999998887764  


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                           ++|+|||+||....  ..........+++|+.|+.++++
T Consensus        91 -----~~D~Vih~Aa~~~~--~~~~~~~~~~~~~Nv~gt~~l~~  127 (344)
T 2gn4_A           91 -----GVDICIHAAALKHV--PIAEYNPLECIKTNIMGASNVIN  127 (344)
T ss_dssp             -----TCSEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             -----cCCEEEECCCCCCC--CchhcCHHHHHHHHHHHHHHHHH
Confidence                 69999999997531  11233456799999999998764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.66  E-value=1.3e-16  Score=119.18  Aligned_cols=112  Identities=17%  Similarity=0.148  Sum_probs=84.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHH--CCCEEEEEEccCccchHH------HHHHHhhCCCCeeEEEEecCCCHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLAL--RGVHVFMAVRNMAAGTDV------KDAIVKEIPTAKVDVLELDLSSLASV   95 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~--~g~~v~~~~r~~~~~~~~------~~~l~~~~~~~~~~~~~~D~~~~~~~   95 (147)
                      .+.++++++|||||+|+||.+++++|++  .|++|++++|+.......      ....... .+.++.++.+|++|.+++
T Consensus         5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHH
T ss_pred             chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHH
Confidence            3567899999999999999999999999  899999999975411000      0001111 134678999999999988


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++      ...++|+||||||....    +.++++..+++|+.|+.++++
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~----~~~~~~~~~~~Nv~gt~~ll~  124 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT----TMLNQELVMKTNYQAFLNLLE  124 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG----GCCCHHHHHHHHTHHHHHHHH
T ss_pred             HHh------hccCCCEEEECCccCCc----cccCHHHHHHHHHHHHHHHHH
Confidence            876      23589999999996432    446678899999999998865

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.66  E-value=1.4e-16  Score=117.56  Aligned_cols=109  Identities=12%  Similarity=0.103  Sum_probs=86.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEE-EecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL-ELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~  103 (147)
                      ..++++++||||++|+||.+++++|+++|++|++++|+.+..+.+...+.... +.++.++ .+|++|.+++.++++   
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHc---
Confidence            35778999999999999999999999999999999998765555555444332 2467777 799999887766554   


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ++|+||||||.....     ++++..+++|+.|+.++++
T Consensus        83 ----~~d~vih~A~~~~~~-----~~~~~~~~~n~~g~~~ll~  116 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS-----NKYDEVVTPAIGGTLNALR  116 (342)
T ss_dssp             ----TCSEEEECCCCCSCC-----SCHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCEEEEeCCCCCCC-----CCHHHHHHHHHHHHHHHHH
Confidence                699999999975421     2456799999999988764

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.66  E-value=6.5e-17  Score=114.97  Aligned_cols=94  Identities=28%  Similarity=0.219  Sum_probs=78.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |++||||++|+||++++++|+++|++|++++|+.+..+.               .+.+|+++.+++.++++++   .+++
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------------~~~~D~~~~~~~~~~~~~~---~~~~   63 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------------DLSTPGGRETAVAAVLDRC---GGVL   63 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------CTTSHHHHHHHHHHHHHHH---TTCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------------cccCCcccHHHHHHHHHHc---CCCc
Confidence            689999999999999999999999999999998764321               1468999999998888765   3689


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||....     .+.++..+++|+.|++++++
T Consensus        64 d~vi~~Ag~~~~-----~~~~~~~~~~N~~~~~~l~~   95 (255)
T 2dkn_A           64 DGLVCCAGVGVT-----AANSGLVVAVNYFGVSALLD   95 (255)
T ss_dssp             SEEEECCCCCTT-----SSCHHHHHHHHTHHHHHHHH
T ss_pred             cEEEECCCCCCc-----chhHHHHHHHHhHHHHHHHH
Confidence            999999997542     23478899999999998865

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.66  E-value=2.1e-16  Score=117.66  Aligned_cols=110  Identities=16%  Similarity=0.068  Sum_probs=89.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++++||||++|+||.+++++|+++|++|++++|+.+....+...+..   ..++.++.+|++|++++.++++..    
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~----   79 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   79 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc---CCceEEEEccccCHHHHHHHHHhc----
Confidence            5678999999999999999999999999999999987665555444321   346788999999999999988876    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+||..  ....+.++++..+++|+.|+.++++
T Consensus        80 -~~d~vih~A~~~--~~~~~~~~~~~~~~~n~~~~~~l~~  116 (357)
T 1rkx_A           80 -QPEIVFHMAAQP--LVRLSYSEPVETYSTNVMGTVYLLE  116 (357)
T ss_dssp             -CCSEEEECCSCC--CHHHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             -CCCEEEECCCCc--ccccchhCHHHHHHHHHHHHHHHHH
Confidence             699999999953  1223456678899999999988764

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.65  E-value=3.1e-16  Score=117.80  Aligned_cols=108  Identities=18%  Similarity=0.125  Sum_probs=82.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-----chHHHHHHHhhCCCC-eeEEEEecCCCHHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-----GTDVKDAIVKEIPTA-KVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++||||++|+||.+++++|+++|++|++++|+.+.     ++.+.......  +. ++.++.+|++|.+++.++++.+ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~-  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV--NKALMKLHYADLTDASSLRRWIDVI-  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC----------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccc--cccceEEEECCCCCHHHHHHHHHhc-
Confidence            789999999999999999999999999999997653     22222221111  22 6788999999999999988876 


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ++|+|||+||....  ..+.++++..+++|+.|+.++++
T Consensus       106 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~l~~  142 (381)
T 1n7h_A          106 ----KPDEVYNLAAQSHV--AVSFEIPDYTADVVATGALRLLE  142 (381)
T ss_dssp             ----CCSEEEECCSCCCH--HHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             ----CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHH
Confidence                69999999996431  22346678899999999988764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.64  E-value=5.2e-16  Score=114.88  Aligned_cols=108  Identities=17%  Similarity=0.180  Sum_probs=87.1

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCC-------CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRG-------VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLAS   94 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g-------~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~   94 (147)
                      ..+..++++++||||++|+||.+++++|+++|       ++|++++|+.+....      .  ...++.++.+|++|.++
T Consensus         7 ~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~--~~~~~~~~~~Dl~d~~~   78 (342)
T 2hrz_A            7 RENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------G--FSGAVDARAADLSAPGE   78 (342)
T ss_dssp             CCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------T--CCSEEEEEECCTTSTTH
T ss_pred             CCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------c--cCCceeEEEcCCCCHHH
Confidence            34456788999999999999999999999999       899999998654322      1  14578889999999998


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.++++      +++|+||||||...   ..+.++++..+++|+.|+.++++
T Consensus        79 ~~~~~~------~~~d~vih~A~~~~---~~~~~~~~~~~~~nv~g~~~l~~  121 (342)
T 2hrz_A           79 AEKLVE------ARPDVIFHLAAIVS---GEAELDFDKGYRINLDGTRYLFD  121 (342)
T ss_dssp             HHHHHH------TCCSEEEECCCCCH---HHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHh------cCCCEEEECCccCc---ccccccHHHHHHHHHHHHHHHHH
Confidence            888775      37999999999643   12356788899999999988764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.64  E-value=6.6e-16  Score=114.24  Aligned_cols=109  Identities=16%  Similarity=0.174  Sum_probs=80.8

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+...++++++||||++|+||.+++++|+++|++|++++|+.....+.   +..   -.++.++.+|++|.+++.++++.
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~---~~~~~~~~~Dl~d~~~~~~~~~~   87 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKD---HPNLTFVEGSIADHALVNQLIGD   87 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCC---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhh---cCCceEEEEeCCCHHHHHHHHhc
Confidence            344457789999999999999999999999999999999975432211   110   03577899999999999988875


Q ss_pred             HHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .     ++|+||||||.....   +.++++  +++|+.++.++++
T Consensus        88 ~-----~~D~vih~A~~~~~~---~~~~~~--~~~N~~~~~~l~~  122 (333)
T 2q1w_A           88 L-----QPDAVVHTAASYKDP---DDWYND--TLTNCVGGSNVVQ  122 (333)
T ss_dssp             H-----CCSEEEECCCCCSCT---TCHHHH--HHHHTHHHHHHHH
T ss_pred             c-----CCcEEEECceecCCC---ccCChH--HHHHHHHHHHHHH
Confidence            3     699999999976432   344555  9999999988764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.63  E-value=1.2e-15  Score=114.03  Aligned_cols=111  Identities=19%  Similarity=0.200  Sum_probs=80.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++||||++|+||.+++++|+++|++|++++|+.+.. .+....+....  .+.++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            37899999999999999999999999999999975431 11112221110  1246888899999999999998876   


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++|+||||||....  ..+.++++..+++|+.|+.++++
T Consensus        78 --~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  114 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLE  114 (372)
T ss_dssp             --CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHH
T ss_pred             --CCCEEEECCcccCc--cccccCHHHHHHHHHHHHHHHHH
Confidence              69999999997532  33445678899999999988764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.63  E-value=8.2e-16  Score=113.96  Aligned_cols=110  Identities=18%  Similarity=0.170  Sum_probs=85.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc------chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA------GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ++++||||++|+||.+++++|+++|++|++++|+...      ..+..+.+.... +.++.++.+|++|.+++.++++..
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            5789999999999999999999999999999986443      333334443321 346888999999999998887752


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                           ++|+|||+||....  ..+.++++..+++|+.++.++++
T Consensus        81 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  117 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAV--GESVQKPLDYYRVNLTGTIQLLE  117 (348)
T ss_dssp             -----CEEEEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             -----CCCEEEECCCCcCc--cchhhchHHHHHHHHHHHHHHHH
Confidence                 79999999996421  11345677899999999988764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.62  E-value=7.9e-16  Score=114.05  Aligned_cols=114  Identities=12%  Similarity=0.099  Sum_probs=79.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++.+.++++|||||+|+||.+++++|+++|  ++|+..+|......  ...+.......++.++.+|++|.+.+.++++.
T Consensus        19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   96 (346)
T 4egb_A           19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE   96 (346)
T ss_dssp             -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh
Confidence            345788999999999999999999999999  67777777542111  11112211135788999999999999999886


Q ss_pred             HHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .     ++|+|||+||....  ..+.++++..+++|+.|+.++++
T Consensus        97 ~-----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~  134 (346)
T 4egb_A           97 R-----DVQVIVNFAAESHV--DRSIENPIPFYDTNVIGTVTLLE  134 (346)
T ss_dssp             H-----TCCEEEECCCCC-----------CHHHHHHTHHHHHHHH
T ss_pred             c-----CCCEEEECCcccch--hhhhhCHHHHHHHHHHHHHHHHH
Confidence            4     69999999997532  23456677899999999988764

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.62  E-value=2.6e-15  Score=111.07  Aligned_cols=107  Identities=18%  Similarity=0.229  Sum_probs=84.1

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++||||++|+||.+++++|+++|++|++++|+. .........+..   ..++.++.+|++|.+++.++++..     +
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~-----~   73 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----M   73 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc---CCceEEEEcCCCCHHHHHHHHhcc-----C
Confidence            5799999999999999999999999999999853 222333344433   246888999999999999988863     6


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+||...  ...+.++++..+++|+.|+.++++
T Consensus        74 ~d~vih~A~~~~--~~~~~~~~~~~~~~nv~~~~~l~~  109 (347)
T 1orr_A           74 PDSCFHLAGQVA--MTTSIDNPCMDFEINVGGTLNLLE  109 (347)
T ss_dssp             CSEEEECCCCCC--HHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECCcccC--hhhhhhCHHHHHHHHHHHHHHHHH
Confidence            999999999642  122345678899999999998765

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.61  E-value=1.7e-15  Score=112.29  Aligned_cols=100  Identities=14%  Similarity=0.106  Sum_probs=77.8

Q ss_pred             ccCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           22 TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        22 ~~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+....+++++||||++|+||.+++++|+++|++|++++|+.+.              .++.++.+|++|.+++.++++ 
T Consensus        12 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~-   76 (347)
T 4id9_A           12 SGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIM-   76 (347)
T ss_dssp             ---------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHT-
T ss_pred             CcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHh-
Confidence            34456888999999999999999999999999999999998653              346678999999999887766 


Q ss_pred             HHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                            ++|+|||+|+...    .+.+.++..+++|+.|+.++++
T Consensus        77 ------~~d~vih~A~~~~----~~~~~~~~~~~~nv~~~~~ll~  111 (347)
T 4id9_A           77 ------GVSAVLHLGAFMS----WAPADRDRMFAVNVEGTRRLLD  111 (347)
T ss_dssp             ------TCSEEEECCCCCC----SSGGGHHHHHHHHTHHHHHHHH
T ss_pred             ------CCCEEEECCcccC----cchhhHHHHHHHHHHHHHHHHH
Confidence                  7999999999643    3445568899999999988764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.61  E-value=1.5e-15  Score=112.79  Aligned_cols=113  Identities=17%  Similarity=0.092  Sum_probs=89.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCC---CeeEEEEecCCCHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT---AKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +.++++++|||||+|+||.+++++|+++|++|++++|+..........+....+.   .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            4467899999999999999999999999999999999876655555555443211   478899999999998887765 


Q ss_pred             HHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                            ++|+|||+||...  ...+.+++...+++|+.++.++++
T Consensus       100 ------~~d~Vih~A~~~~--~~~~~~~~~~~~~~nv~~~~~ll~  136 (351)
T 3ruf_A          100 ------GVDHVLHQAALGS--VPRSIVDPITTNATNITGFLNILH  136 (351)
T ss_dssp             ------TCSEEEECCCCCC--HHHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             ------CCCEEEECCccCC--cchhhhCHHHHHHHHHHHHHHHHH
Confidence                  7999999999642  123445667789999999988764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.60  E-value=2.7e-16  Score=111.22  Aligned_cols=100  Identities=14%  Similarity=0.061  Sum_probs=80.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.+++++|||++|+||++++++|+++|+  +|++++|+++..+...        ...+.++.+|++|++++.++++    
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~----   83 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQ----   83 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGS----
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhc----
Confidence            5789999999999999999999999999  9999999876543221        1257788999999988876654    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ++|+||||||...     ....++..+++|+.++.++++
T Consensus        84 ---~~d~vi~~ag~~~-----~~~~~~~~~~~n~~~~~~~~~  117 (242)
T 2bka_A           84 ---GHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSAE  117 (242)
T ss_dssp             ---SCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHHH
T ss_pred             ---CCCEEEECCCccc-----ccCCcccceeeeHHHHHHHHH
Confidence               6999999999642     123567889999999988764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.60  E-value=5.2e-15  Score=111.52  Aligned_cols=112  Identities=14%  Similarity=0.119  Sum_probs=84.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHH-HCCCEEEEEEccCcc---------chHHHHHHHhhCC---CCe---eEEEEecCCCH
Q 044688           29 GLTAIVTGASSGIGAETTRVLA-LRGVHVFMAVRNMAA---------GTDVKDAIVKEIP---TAK---VDVLELDLSSL   92 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~-~~g~~v~~~~r~~~~---------~~~~~~~l~~~~~---~~~---~~~~~~D~~~~   92 (147)
                      ++++||||++|+||.+++++|+ ++|++|++++|+...         .+.+...+.+...   ..+   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3579999999999999999999 999999999987543         2333332333211   113   88899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++.+++++    ++++|+||||||....  ..+.++++..+++|+.+++++++
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~ll~  129 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQ  129 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCc--CcchhhHHHHHHHHhHHHHHHHH
Confidence            998887764    4569999999996531  11345678899999999998764

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.60  E-value=2.3e-15  Score=111.04  Aligned_cols=109  Identities=19%  Similarity=0.092  Sum_probs=83.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch-HHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT-DVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .++++||||++|+||.+++++|+++|++|++++|+.+... .....+.   ...++.++.+|++|.+++.++++..    
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~----   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA----   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH----
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc---ccCceEEEECCCCCHHHHHHHHHHc----
Confidence            4578999999999999999999999999999999865422 1122221   1346888999999999999988876    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+||....  ..+.++++..+++|+.|+.++++
T Consensus        86 -~~d~Vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  122 (335)
T 1rpn_A           86 -QPQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLLE  122 (335)
T ss_dssp             -CCSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHHH
T ss_pred             -CCCEEEECccccch--hhhhhChHHHHHHHHHHHHHHHH
Confidence             69999999996421  11234567889999999988764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.60  E-value=2.6e-15  Score=111.64  Aligned_cols=112  Identities=15%  Similarity=0.109  Sum_probs=85.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC---CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP---TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+.++++||||++|+||.+++++|+++|++|++++|+.....+....+.+...   ..++.++.+|++|.+++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            36778999999999999999999999999999999976533332333322211   1468889999999998887765  


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                           ++|+|||+||....  ..+.++++..+++|+.++.++++
T Consensus       102 -----~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  138 (352)
T 1sb8_A          102 -----GVDYVLHQAALGSV--PRSINDPITSNATNIDGFLNMLI  138 (352)
T ss_dssp             -----TCSEEEECCSCCCH--HHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             -----CCCEEEECCcccCc--hhhhhCHHHHHHHHHHHHHHHHH
Confidence                 69999999996421  12345678899999999988764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.59  E-value=8.3e-16  Score=108.92  Aligned_cols=104  Identities=17%  Similarity=0.096  Sum_probs=79.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++++++|||++|+||.+++++|+++  |++|++++|++++.++    +     ..++.++.+|++|.+++.++++    
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~----~-----~~~~~~~~~D~~d~~~~~~~~~----   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-----GGEADVFIGDITDADSINPAFQ----   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-----TCCTTEEECCTTSHHHHHHHHT----
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh----c-----CCCeeEEEecCCCHHHHHHHHc----
Confidence            35689999999999999999999999  8999999997543221    1     2356688999999999888775    


Q ss_pred             cCCCccEEEEccccCCCC-----------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASP-----------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~-----------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+||||||.....           .+...+.++..+++|+.++.++++
T Consensus        69 ---~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  118 (253)
T 1xq6_A           69 ---GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID  118 (253)
T ss_dssp             ---TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHH
T ss_pred             ---CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHH
Confidence               589999999975310           122234445678999999887754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.59  E-value=7.1e-15  Score=110.93  Aligned_cols=115  Identities=13%  Similarity=0.137  Sum_probs=84.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch----------------HHHHHHHhhCCCCeeEEEEecC
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT----------------DVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~----------------~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ...+.++|||||+|.||.+++++|+++|++|++++|......                +....+.... +.++.++.+|+
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~v~~~~~Dl   86 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDI   86 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc-CCceEEEECCC
Confidence            457789999999999999999999999999999988532211                1111111111 34688899999


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCCCC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           90 SSLASVRKFASDFTTKGLPLNILINNAGIMASP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|.+++.++++..     ++|+||||||..... ...+++++...+++|+.|+.++++
T Consensus        87 ~d~~~~~~~~~~~-----~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~  139 (404)
T 1i24_A           87 CDFEFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLF  139 (404)
T ss_dssp             TSHHHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHhcc-----CCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHH
Confidence            9999999988865     699999999975321 123566677899999999988764

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.59  E-value=4.5e-15  Score=109.65  Aligned_cols=108  Identities=23%  Similarity=0.197  Sum_probs=80.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|+||.+++++|+++|++|++++|......+....+.... +.++.++.+|++|++++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            68999999999999999999999999999875433222333333221 346778899999999998887752     699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||||||....  ....++.+..+++|+.|+.++++
T Consensus        76 ~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  109 (338)
T 1udb_A           76 TVIHFAGLKAV--GESVQKPLEYYDNNVNGTLRLIS  109 (338)
T ss_dssp             EEEECCSCCCH--HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCccCcc--ccchhcHHHHHHHHHHHHHHHHH
Confidence            99999996421  11234456789999999988764

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.59  E-value=2.5e-15  Score=110.19  Aligned_cols=102  Identities=26%  Similarity=0.299  Sum_probs=81.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ....+++|||||+|+||.+++++|+++|++|++++|+... ..    +       ++.++.+|++|.+++.++++.    
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-------~~~~~~~Dl~d~~~~~~~~~~----   72 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-------NVEMISLDIMDSQRVKKVISD----   72 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-------TEEEEECCTTCHHHHHHHHHH----
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-------eeeEEECCCCCHHHHHHHHHh----
Confidence            3456899999999999999999999999999999998654 21    1       467889999999999988876    


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       +++|+||||||....  ..+.++++..+++|+.|+.++++
T Consensus        73 -~~~d~vih~A~~~~~--~~~~~~~~~~~~~Nv~g~~~l~~  110 (321)
T 2pk3_A           73 -IKPDYIFHLAAKSSV--KDSWLNKKGTFSTNVFGTLHVLD  110 (321)
T ss_dssp             -HCCSEEEECCSCCCH--HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             -cCCCEEEEcCcccch--hhhhhcHHHHHHHHHHHHHHHHH
Confidence             369999999997531  12334678899999999998765

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.58  E-value=3.8e-15  Score=111.64  Aligned_cols=109  Identities=17%  Similarity=0.140  Sum_probs=82.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-----chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-----GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++||||++|+||.+++++|+++|++|++++|+.+.     ++.+....... ...++.++.+|++|.+++.++++..  
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccc-cCCCceEEEccCCCHHHHHHHHHhc--
Confidence            789999999999999999999999999999997543     22221111100 1346788999999999999988876  


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ++|+||||||...  ...+.++++..+++|+.|+.++++
T Consensus       102 ---~~d~vih~A~~~~--~~~~~~~~~~~~~~N~~g~~~l~~  138 (375)
T 1t2a_A          102 ---KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLLD  138 (375)
T ss_dssp             ---CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             ---CCCEEEECCCccc--ccccccCHHHHHHHHHHHHHHHHH
Confidence               6999999999642  112346678899999999988764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.58  E-value=3.2e-15  Score=110.52  Aligned_cols=108  Identities=25%  Similarity=0.173  Sum_probs=78.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCC--CeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++++|||||+|+||.+++++|+++|++|+++.|+.+...... .+... +.  .++.++.+|++|.+++.++++    
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVK-HLLDL-PKAETHLTLWKADLADEGSFDEAIK----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHH-HHHTS-TTHHHHEEEEECCTTSTTTTHHHHT----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHH-HHHhc-ccCCCeEEEEEcCCCCHHHHHHHHc----
Confidence            46789999999999999999999999999999999865433222 12111 11  357888999999988877765    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+|||+|+... ..  ..+..+..+++|+.|+.++++
T Consensus        77 ---~~d~Vih~A~~~~-~~--~~~~~~~~~~~nv~gt~~ll~  112 (337)
T 2c29_D           77 ---GCTGVFHVATPMD-FE--SKDPENEVIKPTIEGMLGIMK  112 (337)
T ss_dssp             ---TCSEEEECCCCCC-SS--CSSHHHHTHHHHHHHHHHHHH
T ss_pred             ---CCCEEEEeccccC-CC--CCChHHHHHHHHHHHHHHHHH
Confidence               5899999998542 11  122235689999999988764

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.58  E-value=4.3e-15  Score=108.27  Aligned_cols=108  Identities=19%  Similarity=0.227  Sum_probs=84.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|+++|||++||+|+++++.|++.|++|++++|+.++.+++.+++...   ..+.++.+|+++++++.++++    
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~----  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVK----  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTT----
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHH----
Confidence            3578999999999999999999999999999999999987777777766543   135567899999988877655    


Q ss_pred             cCCCccEEEEccccCCCCC---CCCH-HHHHHhhhhhhhhhh
Q 044688          105 KGLPLNILINNAGIMASPF---MLSK-DNIELQFATNHLGSL  142 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~---~~~~-~~~~~~~~~N~~g~~  142 (147)
                         .+|+||||+|+.....   +.+. +.++.++++|+.+++
T Consensus       188 ---~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 ---GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             ---TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             ---hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence               4899999998642111   2222 455668999999987

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.55  E-value=9.9e-15  Score=117.56  Aligned_cols=115  Identities=21%  Similarity=0.208  Sum_probs=84.0

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++.++++++||||++|+||.+++++|+++|++|++++|+.....+....+.... ..++.++.+|++|.+++.+++++. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhC-
Confidence            345778999999999999999999999999999999997654433333333211 346778899999999998887753 


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ++|+|||+||....  ....+.....+++|+.++.++++
T Consensus        84 ----~~D~Vih~A~~~~~--~~~~~~~~~~~~~Nv~gt~~ll~  120 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAV--GESTQIPLRYYHNNILGTVVLLE  120 (699)
T ss_dssp             ----CCCEEEECCSCCCH--HHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             ----CCCEEEECCcccCc--CccccCHHHHHHHHHHHHHHHHH
Confidence                79999999996421  11123345688999999888754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.55  E-value=7.1e-15  Score=109.98  Aligned_cols=105  Identities=11%  Similarity=0.100  Sum_probs=83.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~  103 (147)
                      .++++++||||++|+||.+++++|+++ |++|++++|+.+....+..       ..++.++.+|++ |.+.+.++++   
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~---   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVK---   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHH---
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhc---
Confidence            356789999999999999999999998 9999999998765443321       246889999999 9999888876   


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ++|+|||+||....  ....++....+++|+.++.++++
T Consensus        91 ----~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~  127 (372)
T 3slg_A           91 ----KCDVILPLVAIATP--ATYVKQPLRVFELDFEANLPIVR  127 (372)
T ss_dssp             ----HCSEEEECBCCCCH--HHHHHCHHHHHHHHTTTTHHHHH
T ss_pred             ----cCCEEEEcCccccH--HHHhhCHHHHHHHHHHHHHHHHH
Confidence                58999999997531  12234566788999999988764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.55  E-value=5.8e-15  Score=108.90  Aligned_cols=105  Identities=14%  Similarity=0.152  Sum_probs=80.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++||||++|+||.+++++|+++|  ++|++++|+..  ..+.+ .++.   ...++.++.+|++|.+++.+++.    
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~----   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE---DDPRYTFVKGDVADYELVKELVR----   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHH----
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc---cCCceEEEEcCCCCHHHHHHHhh----
Confidence            4679999999999999999999986  89999998642  22221 1111   13468889999999999888772    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ++|+||||||...  .+.+.++++..+++|+.|+.++++
T Consensus        75 ---~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~  111 (336)
T 2hun_A           75 ---KVDGVVHLAAESH--VDRSISSPEIFLHSNVIGTYTLLE  111 (336)
T ss_dssp             ---TCSEEEECCCCCC--HHHHHHCTHHHHHHHHHHHHHHHH
T ss_pred             ---CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHH
Confidence               7999999999642  122345677899999999998765

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.55  E-value=4.4e-15  Score=113.29  Aligned_cols=108  Identities=13%  Similarity=0.101  Sum_probs=78.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc---cchHHHHHHHhhCC-------CCeeEEEEecCCCHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA---AGTDVKDAIVKEIP-------TAKVDVLELDLSSLASV   95 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~---~~~~~~~~l~~~~~-------~~~~~~~~~D~~~~~~~   95 (147)
                      ...++++||||++|+||.+++++|++.|++|++++|+.+   ..+.+.+.+...++       ..++.++.+|++|++++
T Consensus        66 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l  145 (427)
T 4f6c_A           66 HRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDV  145 (427)
T ss_dssp             CCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCC
T ss_pred             CCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccC
Confidence            355789999999999999999999999999999999876   33444444433211       25789999999998777


Q ss_pred             HHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           96 RKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        96 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .        ..+++|+||||||...     ..++++..+++|+.|+.++++
T Consensus       146 ~--------~~~~~d~Vih~A~~~~-----~~~~~~~~~~~Nv~g~~~l~~  183 (427)
T 4f6c_A          146 V--------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIR  183 (427)
T ss_dssp             C--------CSSCCSEEEECCCCC------------CHHHHHHHHHHHHHH
T ss_pred             C--------CcCCCCEEEECCcccC-----CCCCHHHHHHHHHHHHHHHHH
Confidence            6        4578999999999753     235678899999999988765

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.54  E-value=7.4e-15  Score=107.52  Aligned_cols=95  Identities=17%  Similarity=0.167  Sum_probs=53.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++++||||++|+||.+++++|+++|++|++++|+.+.            ++    ++.+|++|.+++.++++..     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~------------~~----~~~~Dl~d~~~~~~~~~~~-----~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR------------PK----FEQVNLLDSNAVHHIIHDF-----Q   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHH-----C
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC------------CC----eEEecCCCHHHHHHHHHhh-----C
Confidence            5789999999999999999999999999999986432            11    6678999999998888865     6


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||....  ..+.++++..+++|+.++.++++
T Consensus        61 ~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~   96 (315)
T 2ydy_A           61 PHVIVHCAAERRP--DVVENQPDAASQLNVDASGNLAK   96 (315)
T ss_dssp             CSEEEECC---------------------CHHHHHHHH
T ss_pred             CCEEEECCcccCh--hhhhcCHHHHHHHHHHHHHHHHH
Confidence            9999999997532  23456778899999999988764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.53  E-value=4.9e-15  Score=108.60  Aligned_cols=104  Identities=16%  Similarity=0.117  Sum_probs=73.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCcc---chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAA---GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~---~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ||++|||||+|+||.+++++|+++|++|+++.| +.+.   ...+ ..+...  ..++.++.+|++|.+++.++++    
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~----   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL-TNLPGA--SEKLHFFNADLSNPDSFAAAIE----   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH-HTSTTH--HHHEEECCCCTTCGGGGHHHHT----
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH-Hhhhcc--CCceEEEecCCCCHHHHHHHHc----
Confidence            588999999999999999999999999999888 5432   1111 111100  1357788999999998887765    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHH-HHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDN-IELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+|||+|+..    ..+.++ ++..+++|+.|++++++
T Consensus        74 ---~~d~vih~A~~~----~~~~~~~~~~~~~~nv~gt~~l~~  109 (322)
T 2p4h_X           74 ---GCVGIFHTASPI----DFAVSEPEEIVTKRTVDGALGILK  109 (322)
T ss_dssp             ---TCSEEEECCCCC------------CHHHHHHHHHHHHHHH
T ss_pred             ---CCCEEEEcCCcc----cCCCCChHHHHHHHHHHHHHHHHH
Confidence               589999999642    122222 35689999999998765

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.53  E-value=2.5e-14  Score=106.46  Aligned_cols=105  Identities=14%  Similarity=0.136  Sum_probs=81.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEEccC--ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVFMAVRNM--AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~--~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++||||++|+||.+++++|++. |++|++++|+.  ...+.+ .++.   .+.++.++.+|++|.+++.+++++.     
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----   72 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS---ESNRYNFEHADICDSAEITRIFEQY-----   72 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT---TCTTEEEEECCTTCHHHHHHHHHHH-----
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh---cCCCeEEEECCCCCHHHHHHHHhhc-----
Confidence            5999999999999999999998 79999999864  222222 1111   1346888999999999999988763     


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||||||...  .+.+.++++..+++|+.|+.++++
T Consensus        73 ~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~  109 (361)
T 1kew_A           73 QPDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLE  109 (361)
T ss_dssp             CCSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEECCCCcC--hhhhhhCHHHHHHHHHHHHHHHHH
Confidence            7999999999642  123445677899999999998765

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.53  E-value=2.5e-14  Score=105.61  Aligned_cols=97  Identities=13%  Similarity=0.102  Sum_probs=72.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|+||.+++++|+++|++|++++|+....+.+    .    ..++.++.+|++|.+++.++++       ++|
T Consensus        15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d   79 (342)
T 2x4g_A           15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----A----YLEPECRVAEMLDHAGLERALR-------GLD   79 (342)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----G----GGCCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----c----cCCeEEEEecCCCHHHHHHHHc-------CCC
Confidence            799999999999999999999999999999987654332    1    1257788999999998877765       699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+||...    .+.++++..+++|+.++.++++
T Consensus        80 ~vih~a~~~~----~~~~~~~~~~~~n~~~~~~l~~  111 (342)
T 2x4g_A           80 GVIFSAGYYP----SRPRRWQEEVASALGQTNPFYA  111 (342)
T ss_dssp             EEEEC----------------CHHHHHHHHHHHHHH
T ss_pred             EEEECCccCc----CCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999643    2345678899999999988764

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.52  E-value=2.1e-14  Score=106.02  Aligned_cols=104  Identities=15%  Similarity=0.161  Sum_probs=75.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH--HHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV--KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++|||||+|+||.+++++|+++|++|+++.|+.+.....  ...+. .  ..++.++.+|++|.+++.++++      
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~--~~~~~~~~~Dl~d~~~~~~~~~------   79 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-E--LGDLKIFRADLTDELSFEAPIA------   79 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-G--GSCEEEEECCTTTSSSSHHHHT------
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-C--CCcEEEEecCCCChHHHHHHHc------
Confidence            68999999999999999999999999999989876543221  12232 1  2467888999999888877665      


Q ss_pred             CCccEEEEccccCCCCCCCCHHH-HHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDN-IELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~-~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+|+...    ...++ .++.+++|+.|+.++++
T Consensus        80 -~~D~Vih~A~~~~----~~~~~~~~~~~~~nv~gt~~ll~  115 (338)
T 2rh8_A           80 -GCDFVFHVATPVH----FASEDPENDMIKPAIQGVVNVMK  115 (338)
T ss_dssp             -TCSEEEEESSCCC----C---------CHHHHHHHHHHHH
T ss_pred             -CCCEEEEeCCccC----CCCCCcHHHHHHHHHHHHHHHHH
Confidence             5899999998542    11222 24589999999988764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.52  E-value=1e-14  Score=101.90  Aligned_cols=88  Identities=14%  Similarity=0.272  Sum_probs=70.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i  109 (147)
                      +++|||++|+||++++++|+++|++|++++|+.+..+..          .++.++.+|++| .+++.++++       ++
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~-------~~   64 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLH-------GM   64 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTT-------TC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHc-------CC
Confidence            599999999999999999999999999999987654322          368889999999 888776654       69


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      |+||||||....          ..+++|+.++.+++
T Consensus        65 d~vi~~ag~~~~----------~~~~~n~~~~~~l~   90 (219)
T 3dqp_A           65 DAIINVSGSGGK----------SLLKVDLYGAVKLM   90 (219)
T ss_dssp             SEEEECCCCTTS----------SCCCCCCHHHHHHH
T ss_pred             CEEEECCcCCCC----------CcEeEeHHHHHHHH
Confidence            999999997641          25666666665554

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.52  E-value=6.7e-15  Score=110.56  Aligned_cols=106  Identities=15%  Similarity=0.129  Sum_probs=82.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++++||||++|+||.+++++|+++| ++|++++|+.....+.   +.   ...++.++.+|++|++++.++++    
T Consensus        29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~---~~~~v~~~~~Dl~d~~~l~~~~~----   98 (377)
T 2q1s_A           29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP---DHPAVRFSETSITDDALLASLQD----   98 (377)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC---CCTTEEEECSCTTCHHHHHHCCS----
T ss_pred             HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc---CCCceEEEECCCCCHHHHHHHhh----
Confidence            4678899999999999999999999999 9999999976542211   10   13468889999999987776554    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ++|+|||+||....  ..+.++++..+++|+.++.++++
T Consensus        99 ---~~d~Vih~A~~~~~--~~~~~~~~~~~~~nv~~~~~ll~  135 (377)
T 2q1s_A           99 ---EYDYVFHLATYHGN--QSSIHDPLADHENNTLTTLKLYE  135 (377)
T ss_dssp             ---CCSEEEECCCCSCH--HHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             ---CCCEEEECCCccCc--hhhhhCHHHHHHHHHHHHHHHHH
Confidence               79999999996421  12345678899999999988764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.52  E-value=2.7e-14  Score=107.41  Aligned_cols=104  Identities=17%  Similarity=0.126  Sum_probs=81.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+++++||||++|+||.+++++|+++|++|++++|+........        ..++.++.+|++|.+++.++++      
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~------   92 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--------MFCDEFHLVDLRVMENCLKVTE------   92 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG--------GTCSEEEECCTTSHHHHHHHHT------
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc--------cCCceEEECCCCCHHHHHHHhC------
Confidence            35689999999999999999999999999999999865432110        2357788999999998887764      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+||..... ..+.++++..+++|+.++.++++
T Consensus        93 -~~d~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~g~~~ll~  130 (379)
T 2c5a_A           93 -GVDHVFNLAADMGGM-GFIQSNHSVIMYNNTMISFNMIE  130 (379)
T ss_dssp             -TCSEEEECCCCCCCH-HHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEECceecCcc-cccccCHHHHHHHHHHHHHHHHH
Confidence             699999999965311 11134577899999999988764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.51  E-value=5.5e-14  Score=103.42  Aligned_cols=102  Identities=19%  Similarity=0.191  Sum_probs=81.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +++||||++|+||.+++++|+++|++|++++|+.....+       .. ..++.++.+|++|.+++.+++++     .++
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~-~~~~~~~~~D~~~~~~~~~~~~~-----~~~   68 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-------AI-TEGAKFYNGDLRDKAFLRDVFTQ-----ENI   68 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-------GS-CTTSEEEECCTTCHHHHHHHHHH-----SCE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-------hc-CCCcEEEECCCCCHHHHHHHHhh-----cCC
Confidence            579999999999999999999999999999987543321       11 12577889999999999888775     379


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||....  ..+.++++..+++|+.++.++++
T Consensus        69 d~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  103 (330)
T 2c20_A           69 EAVMHFAADSLV--GVSMEKPLQYYNNNVYGALCLLE  103 (330)
T ss_dssp             EEEEECCCCCCH--HHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEECCcccCc--cccccCHHHHHHHHhHHHHHHHH
Confidence            999999996421  12345678899999999988764

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.51  E-value=7.7e-15  Score=105.34  Aligned_cols=93  Identities=18%  Similarity=0.228  Sum_probs=77.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |++||||++|+||.+++++|+++|++|++++|+.....           ...+.++.+|++|++++.++++       .+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-------~~   64 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-----------EAHEEIVACDLADAQAVHDLVK-------DC   64 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-----------CTTEEECCCCTTCHHHHHHHHT-------TC
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-----------CCCccEEEccCCCHHHHHHHHc-------CC
Confidence            68999999999999999999999999999999865321           1246788999999998887765       59


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+||||||..      ..+.++..+++|+.++.++++
T Consensus        65 d~vi~~a~~~------~~~~~~~~~~~n~~~~~~l~~   95 (267)
T 3ay3_A           65 DGIIHLGGVS------VERPWNDILQANIIGAYNLYE   95 (267)
T ss_dssp             SEEEECCSCC------SCCCHHHHHHHTHHHHHHHHH
T ss_pred             CEEEECCcCC------CCCCHHHHHHHHHHHHHHHHH
Confidence            9999999965      234567899999999988764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.51  E-value=2.1e-14  Score=105.03  Aligned_cols=101  Identities=23%  Similarity=0.301  Sum_probs=79.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|+||.+++++|+++|++|++++|......+   .+     ...+.++.+|++|++++.+++++.     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   68 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE---NV-----PKGVPFFRVDLRDKEGVERAFREF-----RPT   68 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG---GS-----CTTCCEECCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh---hc-----ccCeEEEECCCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999999999999885432111   01     124567889999999999888753     699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++||+|+...  ...+.++++..+++|+.|++++++
T Consensus        69 ~vi~~a~~~~--~~~~~~~~~~~~~~N~~g~~~l~~  102 (311)
T 2p5y_A           69 HVSHQAAQAS--VKVSVEDPVLDFEVNLLGGLNLLE  102 (311)
T ss_dssp             EEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             EEEECccccC--chhhhhCHHHHHHHHHHHHHHHHH
Confidence            9999998642  123446678899999999998764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.50  E-value=5.5e-14  Score=108.90  Aligned_cols=107  Identities=20%  Similarity=0.250  Sum_probs=81.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC---CCEEEEEEccCccchHHHHHHHhhCC--------------CCeeEEEEec
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR---GVHVFMAVRNMAAGTDVKDAIVKEIP--------------TAKVDVLELD   88 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~---g~~v~~~~r~~~~~~~~~~~l~~~~~--------------~~~~~~~~~D   88 (147)
                      ..+++++||||++|+||.+++++|++.   |++|++++|+.+.. .....+.+...              ..++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDE-DARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHH-HHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcH-HHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            467899999999999999999999998   89999999986543 22222222221              2579999999


Q ss_pred             CC------CHHHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 LS------SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ~~------~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++      +.+.+.++++       ++|+||||||....      +.++..+++|+.|+.++++
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~------~~~~~~~~~Nv~gt~~ll~  199 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA------FPYHELFGPNVAGTAELIR  199 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB------SSCCEEHHHHHHHHHHHHH
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC------cCHHHHHHHHHHHHHHHHH
Confidence            98      5566666665       58999999997542      3445788999999988764

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.50  E-value=1.3e-13  Score=96.26  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=65.2

Q ss_pred             CEEEEecCCCchhHHHHHHHH-HCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLA-LRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~-~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      |+++|||++|+||++++++|+ +.|++|++++|+++ +.+++.    ..  ..++.++.+|++|++++.++++       
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~~-------   72 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAVT-------   72 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHHT-------
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHHc-------
Confidence            789999999999999999999 89999999999876 554433    12  4578899999999999988875       


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+||||+|.
T Consensus        73 ~~d~vv~~ag~   83 (221)
T 3r6d_A           73 NAEVVFVGAME   83 (221)
T ss_dssp             TCSEEEESCCC
T ss_pred             CCCEEEEcCCC
Confidence            68999999985

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.50  E-value=4.7e-14  Score=97.06  Aligned_cols=77  Identities=19%  Similarity=0.100  Sum_probs=64.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++++|||++|+||.+++++|+++|++|++++|+++.....       . ..++.++.+|++|++++.++++       .
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-------~-~~~~~~~~~D~~~~~~~~~~~~-------~   67 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-------G-PRPAHVVVGDVLQAADVDKTVA-------G   67 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-------S-CCCSEEEESCTTSHHHHHHHHT-------T
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-------c-CCceEEEEecCCCHHHHHHHHc-------C
Confidence            47899999999999999999999999999999986653321       0 3467889999999998887765       5


Q ss_pred             ccEEEEccccCC
Q 044688          109 LNILINNAGIMA  120 (147)
Q Consensus       109 id~lv~~ag~~~  120 (147)
                      +|++|||+|...
T Consensus        68 ~d~vi~~a~~~~   79 (206)
T 1hdo_A           68 QDAVIVLLGTRN   79 (206)
T ss_dssp             CSEEEECCCCTT
T ss_pred             CCEEEECccCCC
Confidence            899999999754

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.49  E-value=3.7e-14  Score=105.60  Aligned_cols=106  Identities=11%  Similarity=0.074  Sum_probs=76.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++++||||++|+||.+++++|+++| ++|++++|+.....  ...+    ++..   +.+|+++.+.+.++++.  .
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~----~~~~---~~~d~~~~~~~~~~~~~--~  111 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL----VDLN---IADYMDKEDFLIQIMAG--E  111 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT----TTSC---CSEEEEHHHHHHHHHTT--C
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc----cCce---EeeecCcHHHHHHHHhh--c
Confidence            4677899999999999999999999999 89999999765421  0111    1112   67899998888777653  2


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++++|+|||+||....    +.++++..+++|+.++.++++
T Consensus       112 ~~~~~d~Vih~A~~~~~----~~~~~~~~~~~n~~~~~~ll~  149 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSST----TEWDGKYMMDNNYQYSKELLH  149 (357)
T ss_dssp             CCSSCCEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHH
T ss_pred             ccCCCCEEEECCcccCC----ccCCHHHHHHHHHHHHHHHHH
Confidence            35689999999997542    334567899999999988764

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.48  E-value=2.7e-14  Score=105.77  Aligned_cols=104  Identities=22%  Similarity=0.190  Sum_probs=79.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++||||++|+||.+++++|+++  |++|++++|+... ..+....+    ...++.++.+|++|.+++.++++      
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~------   74 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI----LGDRVELVVGDIADAELVDKLAA------   74 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG----CSSSEEEEECCTTCHHHHHHHHT------
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh----ccCCeEEEECCCCCHHHHHHHhh------
Confidence            68999999999999999999998  8999999996421 11111111    13468889999999998887765      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+|||+||...  ...+.++++..+++|+.|+.++++
T Consensus        75 -~~d~vih~A~~~~--~~~~~~~~~~~~~~Nv~g~~~l~~  111 (348)
T 1oc2_A           75 -KADAIVHYAAESH--NDNSLNDPSPFIHTNFIGTYTLLE  111 (348)
T ss_dssp             -TCSEEEECCSCCC--HHHHHHCCHHHHHHHTHHHHHHHH
T ss_pred             -cCCEEEECCcccC--ccchhhCHHHHHHHHHHHHHHHHH
Confidence             4699999999642  122345567899999999998765

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.48  E-value=5e-14  Score=98.61  Aligned_cols=93  Identities=18%  Similarity=0.083  Sum_probs=73.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||++|+||.+++++|+++|++|++++|++++...+         ...+.++.+|++|.+++.++++       .+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   68 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCK-------GA   68 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHT-------TC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhc-------CC
Confidence            6899999999999999999999999999999987654321         2468899999999999988776       58


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||....        ....+++|+.++.++++
T Consensus        69 d~vi~~a~~~~~--------~~~~~~~n~~~~~~l~~   97 (227)
T 3dhn_A           69 DAVISAFNPGWN--------NPDIYDETIKVYLTIID   97 (227)
T ss_dssp             SEEEECCCC--------------CCSHHHHHHHHHHH
T ss_pred             CEEEEeCcCCCC--------ChhHHHHHHHHHHHHHH
Confidence            999999986421        11267778888776653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.48  E-value=5.4e-14  Score=99.40  Aligned_cols=77  Identities=14%  Similarity=0.108  Sum_probs=64.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +..|++||||++|+||++++++|+++| ++|++++|+++...++.        ...+.++.+|++|++++.++++     
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-----   87 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY--------PTNSQIIMGDVLNHAALKQAMQ-----   87 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC--------CTTEEEEECCTTCHHHHHHHHT-----
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc--------cCCcEEEEecCCCHHHHHHHhc-----
Confidence            445899999999999999999999999 89999999876543211        3468889999999999988876     


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                        .+|+||||+|.
T Consensus        88 --~~D~vv~~a~~   98 (236)
T 3qvo_A           88 --GQDIVYANLTG   98 (236)
T ss_dssp             --TCSEEEEECCS
T ss_pred             --CCCEEEEcCCC
Confidence              68999999985

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.46  E-value=4.7e-14  Score=102.22  Aligned_cols=90  Identities=24%  Similarity=0.384  Sum_probs=74.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -..+++||||++|+||.+++++|+++|++|++++|+                       .+|++|.+++.++++..    
T Consensus        10 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~----   62 (292)
T 1vl0_A           10 HHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEK----   62 (292)
T ss_dssp             --CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHH----
T ss_pred             cccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhc----
Confidence            346899999999999999999999999999999885                       26999999999888865    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+||...  ...+.++++..+++|+.|+.++++
T Consensus        63 -~~d~vih~A~~~~--~~~~~~~~~~~~~~nv~~~~~l~~   99 (292)
T 1vl0_A           63 -KPNVVINCAAHTA--VDKCEEQYDLAYKINAIGPKNLAA   99 (292)
T ss_dssp             -CCSEEEECCCCCC--HHHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             -CCCEEEECCccCC--HHHHhcCHHHHHHHHHHHHHHHHH
Confidence             7999999999642  122346678899999999988764

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.46  E-value=1.3e-13  Score=98.79  Aligned_cols=92  Identities=21%  Similarity=0.280  Sum_probs=76.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|+||.+++++|+ +|++|++++|+.+. .          ++     +.+|++|++++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~----------~~-----~~~Dl~~~~~~~~~~~~~-----~~d   59 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q----------GG-----YKLDLTDFPRLEDFIIKK-----RPD   59 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T----------TC-----EECCTTSHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C----------CC-----ceeccCCHHHHHHHHHhc-----CCC
Confidence            58999999999999999999 48999999998642 1          12     789999999999988876     699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||||||....  ..+.++++..+++|+.++.++++
T Consensus        60 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~   93 (273)
T 2ggs_A           60 VIINAAAMTDV--DKCEIEKEKAYKINAEAVRHIVR   93 (273)
T ss_dssp             EEEECCCCCCH--HHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             EEEECCcccCh--hhhhhCHHHHHHHhHHHHHHHHH
Confidence            99999996531  22346788999999999988765

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.45  E-value=2.7e-14  Score=104.31  Aligned_cols=98  Identities=15%  Similarity=0.159  Sum_probs=77.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +++||||++|+||.+++++|+++|++|++++|+.+......        ...+.++.+|++|.+ +.+.++       . 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~-------~-   63 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIK-------G-   63 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCC-------C-
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcC-------C-
Confidence            46999999999999999999999999999999765433221        245778899999987 554332       3 


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||..  ....+.++++..+++|+.++.++++
T Consensus        64 d~vih~A~~~--~~~~~~~~~~~~~~~n~~~~~~l~~   98 (312)
T 3ko8_A           64 DVVFHFAANP--EVRLSTTEPIVHFNENVVATFNVLE   98 (312)
T ss_dssp             SEEEECCSSC--SSSGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEECCCCC--CchhhhhCHHHHHHHHHHHHHHHHH
Confidence            9999999954  2345566778899999999988764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.45  E-value=9.8e-14  Score=101.23  Aligned_cols=100  Identities=13%  Similarity=0.138  Sum_probs=79.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++||||++|+||.+++++|+++  |++|++++|+.....     +.     .++.++.+|++|.+++.+++++.    
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~-----~~~~~~~~D~~d~~~~~~~~~~~----   67 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VV-----NSGPFEVVNALDFNQIEHLVEVH----   67 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HH-----HSSCEEECCTTCHHHHHHHHHHT----
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----cc-----CCCceEEecCCCHHHHHHHHhhc----
Confidence            477999999999999999999998  899999999865421     11     13457889999999998888754    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       ++|+|||+||....   ...++++..+++|+.++.++++
T Consensus        68 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~  103 (312)
T 2yy7_A           68 -KITDIYLMAALLSA---TAEKNPAFAWDLNMNSLFHVLN  103 (312)
T ss_dssp             -TCCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCEEEECCccCCC---chhhChHHHHHHHHHHHHHHHH
Confidence             69999999996431   1235577889999999988764

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.45  E-value=1.4e-13  Score=101.68  Aligned_cols=101  Identities=14%  Similarity=0.097  Sum_probs=76.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~  107 (147)
                      +++||||++|+||.+++++|+++ |++|++++|+.+....+.       ...++.++.+|++|. +.+.++++       
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~-------   66 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK-------   66 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-------TCTTEEEEECCTTTCSHHHHHHHH-------
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-------cCCCeEEEeccccCcHHHHHhhcc-------
Confidence            46999999999999999999998 899999999876543321       134688899999984 55666655       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+|||+||...+  ....++++..+++|+.++.++++
T Consensus        67 ~~d~vih~A~~~~~--~~~~~~~~~~~~~n~~~~~~l~~  103 (345)
T 2bll_A           67 KCDVVLPLVAIATP--IEYTRNPLRVFELDFEENLRIIR  103 (345)
T ss_dssp             HCSEEEECBCCCCH--HHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEEcccccCc--cchhcCHHHHHHHHHHHHHHHHH
Confidence            48999999996531  11234567789999999887754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.44  E-value=1.5e-13  Score=101.47  Aligned_cols=104  Identities=15%  Similarity=0.084  Sum_probs=77.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHC---C---CEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALR---G---VHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~---g---~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++||||++|+||.+++++|+++   |   ++|++++|+... ..+....+.   .+.++.++.+|++|.+++.+++    
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD---ADPRLRFVHGDIRDAGLLAREL----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT---TCTTEEEEECCTTCHHHHHHHT----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc---cCCCeEEEEcCCCCHHHHHHHh----
Confidence            5999999999999999999997   8   899999986421 111111111   1346888999999998887766    


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .++|+|||+||...  ...+.++++..+++|+.++.++++
T Consensus        75 ---~~~d~Vih~A~~~~--~~~~~~~~~~~~~~Nv~~~~~l~~  112 (337)
T 1r6d_A           75 ---RGVDAIVHFAAESH--VDRSIAGASVFTETNVQGTQTLLQ  112 (337)
T ss_dssp             ---TTCCEEEECCSCCC--HHHHHHCCHHHHHHHTHHHHHHHH
T ss_pred             ---cCCCEEEECCCccC--chhhhhCHHHHHHHHHHHHHHHHH
Confidence               37999999999642  112334567889999999988764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.43  E-value=1e-13  Score=101.43  Aligned_cols=98  Identities=15%  Similarity=0.165  Sum_probs=74.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +++||||++|+||.+++++|+++|..|++..++....+..         ...+.++.+|+++ +++.++++       .+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~-------~~   64 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLK-------GA   64 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHT-------TC
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhc-------CC
Confidence            4799999999999999999999995555555544332211         2457889999999 77777665       79


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+|+..  ....+.++++..+++|+.|+.++++
T Consensus        65 d~vih~a~~~--~~~~~~~~~~~~~~~nv~~~~~l~~   99 (313)
T 3ehe_A           65 EEVWHIAANP--DVRIGAENPDEIYRNNVLATYRLLE   99 (313)
T ss_dssp             SEEEECCCCC--CCC-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             CEEEECCCCC--ChhhhhhCHHHHHHHHHHHHHHHHH
Confidence            9999999854  3345566788999999999998764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.42  E-value=3.9e-13  Score=100.01  Aligned_cols=98  Identities=12%  Similarity=0.066  Sum_probs=78.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-----CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG-----VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g-----~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++++||||++|+||.+++++|+++|     ++|++++|+.....     +    ...++.++.+|++|.+++.++++.  
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~----~~~~~~~~~~Dl~d~~~~~~~~~~--   69 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----H----EDNPINYVQCDISDPDDSQAKLSP--   69 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----C----CSSCCEEEECCTTSHHHHHHHHTT--
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----c----ccCceEEEEeecCCHHHHHHHHhc--
Confidence            4689999999999999999999999     99999999865432     1    134678899999999988776653  


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ...+|+|||+||...       .+.+..+++|+.++.++++
T Consensus        70 --~~~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~l~~  103 (364)
T 2v6g_A           70 --LTDVTHVFYVTWANR-------STEQENCEANSKMFRNVLD  103 (364)
T ss_dssp             --CTTCCEEEECCCCCC-------SSHHHHHHHHHHHHHHHHH
T ss_pred             --CCCCCEEEECCCCCc-------chHHHHHHHhHHHHHHHHH
Confidence              224999999999652       2356788999999888754

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.42  E-value=5.1e-13  Score=97.69  Aligned_cols=93  Identities=16%  Similarity=0.178  Sum_probs=73.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++++||||++|.||.+++++|+++|++|++++|+.....     +      ..+.++.+|++ .+++.++++       +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~------~~~~~~~~Dl~-~~~~~~~~~-------~   62 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----I------NDYEYRVSDYT-LEDLINQLN-------D   62 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTT-------T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----C------CceEEEEcccc-HHHHHHhhc-------C
Confidence            378999999999999999999999999999999833221     1      15778899999 888877665       7


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+||.....      +.+..+++|+.++.++++
T Consensus        63 ~d~Vih~a~~~~~~------~~~~~~~~n~~~~~~ll~   94 (311)
T 3m2p_A           63 VDAVVHLAATRGSQ------GKISEFHDNEILTQNLYD   94 (311)
T ss_dssp             CSEEEECCCCCCSS------SCGGGTHHHHHHHHHHHH
T ss_pred             CCEEEEccccCCCC------ChHHHHHHHHHHHHHHHH
Confidence            99999999976432      345678889888877654

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.42  E-value=1.5e-13  Score=100.54  Aligned_cols=95  Identities=20%  Similarity=0.325  Sum_probs=76.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++||||++|+||.+++++|+++  |++|++++|+.....             .+.++.+|++|.+++.+++++.     +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-------------~~~~~~~D~~d~~~~~~~~~~~-----~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-------------GIKFITLDVSNRDEIDRAVEKY-----S   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-------------TCCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-------------CceEEEecCCCHHHHHHHHhhc-----C
Confidence            3899999999999999999998  789999998754321             2457789999999998888752     7


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+||....   ...++++..+++|+.++.++++
T Consensus        63 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~   97 (317)
T 3ajr_A           63 IDAIFHLAGILSA---KGEKDPALAYKVNMNGTYNILE   97 (317)
T ss_dssp             CCEEEECCCCCHH---HHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CcEEEECCcccCC---ccccChHHHhhhhhHHHHHHHH
Confidence            9999999996431   1235567889999999988764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.41  E-value=1.7e-14  Score=100.07  Aligned_cols=94  Identities=16%  Similarity=0.076  Sum_probs=74.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+++++|||++|+||.+++++|+++|+  +|++++|+++.          .  ..++.++.+|++|.+++.+++      
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~--~~~~~~~~~D~~~~~~~~~~~------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------E--HPRLDNPVGPLAELLPQLDGS------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------C--CTTEECCBSCHHHHGGGCCSC------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------c--CCCceEEeccccCHHHHHHhh------
Confidence            468999999999999999999999998  99999998654          1  235777888988776654432      


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         +|+||||||....    +.++++..+++|+.++.++++
T Consensus        66 ---~d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~   99 (215)
T 2a35_A           66 ---IDTAFCCLGTTIK----EAGSEEAFRAVDFDLPLAVGK   99 (215)
T ss_dssp             ---CSEEEECCCCCHH----HHSSHHHHHHHHTHHHHHHHH
T ss_pred             ---hcEEEECeeeccc----cCCCHHHHHHhhHHHHHHHHH
Confidence               8999999996431    234577889999999887764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.39  E-value=2.4e-13  Score=100.65  Aligned_cols=105  Identities=15%  Similarity=0.185  Sum_probs=74.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.++++||||++|+||.+++++|+++|++|++++|+..........+   ....++.++.+|+.+..           
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW---IGHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG---TTCTTEEEEECCTTSCC-----------
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhh---ccCCceEEEeCccCChh-----------
Confidence            3467899999999999999999999999999999999754322211111   11346888899998752           


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       +..+|+|||+||......  ..++++..+++|+.++.++++
T Consensus        89 -~~~~d~vih~A~~~~~~~--~~~~~~~~~~~n~~~~~~l~~  127 (343)
T 2b69_A           89 -YIEVDQIYHLASPASPPN--YMYNPIKTLKTNTIGTLNMLG  127 (343)
T ss_dssp             -CCCCSEEEECCSCCSHHH--HTTCHHHHHHHHHHHHHHHHH
T ss_pred             -hcCCCEEEECccccCchh--hhhCHHHHHHHHHHHHHHHHH
Confidence             457999999999653110  123456789999999988764

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.39  E-value=3.1e-13  Score=108.31  Aligned_cols=105  Identities=13%  Similarity=0.089  Sum_probs=79.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHH-HHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLAS-VRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~  103 (147)
                      .++++++||||++|+||.+++++|+++ |++|++++|+.+....+.       ...++.++.+|++|.++ +.++++   
T Consensus       312 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-------~~~~v~~v~~Dl~d~~~~~~~~~~---  381 (660)
T 1z7e_A          312 ARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-------NHPHFHFVEGDISIHSEWIEYHVK---  381 (660)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-------TCTTEEEEECCTTTCHHHHHHHHH---
T ss_pred             hccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-------cCCceEEEECCCCCcHHHHHHhhc---
Confidence            357789999999999999999999998 899999999866543221       13468889999998764 555554   


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ++|+|||+||....  ....++++..+++|+.|+.++++
T Consensus       382 ----~~D~Vih~Aa~~~~--~~~~~~~~~~~~~Nv~gt~~ll~  418 (660)
T 1z7e_A          382 ----KCDVVLPLVAIATP--IEYTRNPLRVFELDFEENLRIIR  418 (660)
T ss_dssp             ----HCSEEEECCCCCCT--HHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             ----CCCEEEECceecCc--cccccCHHHHHHhhhHHHHHHHH
Confidence                58999999996532  11234567889999999888754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.38  E-value=1.5e-13  Score=99.29  Aligned_cols=86  Identities=17%  Similarity=0.343  Sum_probs=72.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||++|+||.++++.|+++|++|++++|.                       .+|++|.+.+.++++..     ++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~-----~~d   58 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEI-----RPH   58 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhc-----CCC
Confidence            79999999999999999999999999999982                       27999999999998876     799


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+||....  ..+.++++..+++|+.++.++++
T Consensus        59 ~vi~~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~   92 (287)
T 3sc6_A           59 IIIHCAAYTKV--DQAEKERDLAYVINAIGARNVAV   92 (287)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHH
T ss_pred             EEEECCcccCh--HHHhcCHHHHHHHHHHHHHHHHH
Confidence            99999997531  12224677899999999988764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.38  E-value=5.1e-13  Score=93.17  Aligned_cols=72  Identities=19%  Similarity=0.191  Sum_probs=58.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|+||++++++|+++|++|++++|+.+....    +.    ...+.++.+|++|.++  +.       +.++|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~~----~~~~~~~~~D~~d~~~--~~-------~~~~d   64 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD----RL----GATVATLVKEPLVLTE--AD-------LDSVD   64 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HT----CTTSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc----cc----CCCceEEecccccccH--hh-------cccCC
Confidence            59999999999999999999999999999998654332    21    3467889999999887  22       24799


Q ss_pred             EEEEccccC
Q 044688          111 ILINNAGIM  119 (147)
Q Consensus       111 ~lv~~ag~~  119 (147)
                      +||||||..
T Consensus        65 ~vi~~ag~~   73 (224)
T 3h2s_A           65 AVVDALSVP   73 (224)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCccC
Confidence            999999975

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.38  E-value=1.9e-12  Score=96.01  Aligned_cols=87  Identities=9%  Similarity=0.062  Sum_probs=66.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +..++++|||++|+||.++++.|++.|++|++++|+..........+.... ...+.++.+|++|.+++.+++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhhC----
Confidence            345789999999999999999999999999999998633222222221111 246888999999999999888763    


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ++|+|||++|..
T Consensus        83 -~~d~Vi~~a~~~   94 (346)
T 3i6i_A           83 -EIDIVVSTVGGE   94 (346)
T ss_dssp             -TCCEEEECCCGG
T ss_pred             -CCCEEEECCchh
Confidence             799999999863

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.36  E-value=7.5e-13  Score=96.97  Aligned_cols=91  Identities=14%  Similarity=0.127  Sum_probs=73.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .++++||||++|+||.+++++|+++|++|+++.|+.                      .+|++|.+++.++++..     
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~-----   54 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----   54 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhc-----
Confidence            357899999999999999999999999998887652                      26999999999888765     


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+|||+||.... .....++.+..+++|+.++.++++
T Consensus        55 ~~d~vih~a~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~   92 (321)
T 1e6u_A           55 RIDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNIIH   92 (321)
T ss_dssp             CCSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEcCeecCC-cchhhhCHHHHHHHHHHHHHHHHH
Confidence            79999999996421 112334567789999999887754

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.33  E-value=2.4e-12  Score=89.41  Aligned_cols=72  Identities=22%  Similarity=0.253  Sum_probs=58.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|+||++++++|+++|++|++++|++++...+.         ..+.++.+|++|.++  +.       +.++|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~-------~~~~d   63 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SD-------LSDQN   63 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HH-------HTTCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hh-------hcCCC
Confidence            5899999999999999999999999999999865433221         357789999999877  22       24799


Q ss_pred             EEEEccccCC
Q 044688          111 ILINNAGIMA  120 (147)
Q Consensus       111 ~lv~~ag~~~  120 (147)
                      +||||||...
T Consensus        64 ~vi~~ag~~~   73 (221)
T 3ew7_A           64 VVVDAYGISP   73 (221)
T ss_dssp             EEEECCCSST
T ss_pred             EEEECCcCCc
Confidence            9999999753

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.33  E-value=5.4e-12  Score=88.74  Aligned_cols=79  Identities=20%  Similarity=0.259  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           26 DATGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        26 ~~~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ++.||++|||||                +|++|.++|+.|+++|++|++++++.. ++         .+.+ +  -.+|+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~---------~~~g-~--~~~dv   71 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP---------TPPF-V--KRVDV   71 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC---------CCTT-E--EEEEC
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc---------cCCC-C--eEEcc
Confidence            478999999999                689999999999999999999987642 11         0111 1  24687


Q ss_pred             CCHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           90 SSLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      ++.++   +++.+.+.++++|++|||||+..
T Consensus        72 ~~~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           72 MTALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             CSHHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CcHHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            77544   55666777889999999999863

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.32  E-value=7.3e-13  Score=96.15  Aligned_cols=89  Identities=17%  Similarity=0.117  Sum_probs=72.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|||++|+||.+++++|+ +|++|++++|+..                   .+.+|++|.+++.++++..     ++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~-----~~d   56 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKL-----RPD   56 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhc-----CCC
Confidence            69999999999999999999 8999999998751                   2368999999999888765     699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+||....  ..+.++++..+++|+.++.++++
T Consensus        57 ~vih~a~~~~~--~~~~~~~~~~~~~n~~~~~~l~~   90 (299)
T 1n2s_A           57 VIVNAAAHTAV--DKAESEPELAQLLNATSVEAIAK   90 (299)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHHH
T ss_pred             EEEECcccCCH--hhhhcCHHHHHHHHHHHHHHHHH
Confidence            99999996431  11234567789999999988764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.32  E-value=2.7e-12  Score=92.66  Aligned_cols=74  Identities=22%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++|||++|+||.+++++|+++  |++|++++|+.+....+.    .    ..+.++.+|++|.+++.++++       
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~----~~~~~~~~D~~d~~~l~~~~~-------   65 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D----QGVEVRHGDYNQPESLQKAFA-------   65 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h----cCCeEEEeccCCHHHHHHHHh-------
Confidence            46999999999999999999998  999999999876544332    1    246788999999998887765       


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+|||+||.
T Consensus        66 ~~d~vi~~a~~   76 (287)
T 2jl1_A           66 GVSKLLFISGP   76 (287)
T ss_dssp             TCSEEEECCCC
T ss_pred             cCCEEEEcCCC
Confidence            58999999985

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.31  E-value=4.1e-13  Score=97.12  Aligned_cols=93  Identities=18%  Similarity=0.126  Sum_probs=71.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +++++|||| +|+||.+++++|+++|++|++++|+.+..            ...+.++.+|++|.+++.++++      +
T Consensus         2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~------~   62 (286)
T 3gpi_A            2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM------------PAGVQTLIADVTRPDTLASIVH------L   62 (286)
T ss_dssp             CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC------------CTTCCEEECCTTCGGGCTTGGG------G
T ss_pred             CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCCceEEccCCChHHHHHhhc------C
Confidence            357899999 59999999999999999999999986642            2457788999999988877655      3


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+|||+||...       .+.+..+++|+.++.++++
T Consensus        63 ~~d~vih~a~~~~-------~~~~~~~~~n~~~~~~ll~   94 (286)
T 3gpi_A           63 RPEILVYCVAASE-------YSDEHYRLSYVEGLRNTLS   94 (286)
T ss_dssp             CCSEEEECHHHHH-------HC-----CCSHHHHHHHHH
T ss_pred             CCCEEEEeCCCCC-------CCHHHHHHHHHHHHHHHHH
Confidence            6999999998632       3446677888888777653

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.30  E-value=1.6e-11  Score=89.93  Aligned_cols=79  Identities=11%  Similarity=0.168  Sum_probs=64.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||++|+||.+++++|+++|++|++++|+.+...+....+..    ..+.++.+|++|.+++.++++       ++
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~----~~v~~v~~Dl~d~~~l~~a~~-------~~   80 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS----LGAIIVKGELDEHEKLVELMK-------KV   80 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc----CCCEEEEecCCCHHHHHHHHc-------CC
Confidence            6799999999999999999999999999999987533333333332    247788999999999888775       59


Q ss_pred             cEEEEccccC
Q 044688          110 NILINNAGIM  119 (147)
Q Consensus       110 d~lv~~ag~~  119 (147)
                      |+|||+++..
T Consensus        81 d~vi~~a~~~   90 (318)
T 2r6j_A           81 DVVISALAFP   90 (318)
T ss_dssp             SEEEECCCGG
T ss_pred             CEEEECCchh
Confidence            9999999864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.30  E-value=2.1e-12  Score=93.96  Aligned_cols=101  Identities=12%  Similarity=0.071  Sum_probs=74.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++||||++|+||.+++++|+++| ++|++++|+.....  ...+.    +..   +.+|+++.+.+.++++..  .++++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~----~~~---~~~d~~~~~~~~~~~~~~--~~~~~   69 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV----DLN---IADYMDKEDFLIQIMAGE--EFGDV   69 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHH----TSC---CSEEEEHHHHHHHHHTTC--CCSSC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcC----cce---eccccccHHHHHHHHhcc--ccCCC
Confidence            38999999999999999999999 89999998765421  11121    112   578998888777665421  12369


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||....    +.++++..+++|+.++.++++
T Consensus        70 d~vi~~a~~~~~----~~~~~~~~~~~n~~~~~~l~~  102 (310)
T 1eq2_A           70 EAIFHEGACSST----TEWDGKYMMDNNYQYSKELLH  102 (310)
T ss_dssp             CEEEECCSCCCT----TCCCHHHHHHHTHHHHHHHHH
T ss_pred             cEEEECcccccC----cccCHHHHHHHHHHHHHHHHH
Confidence            999999997542    334567889999999988764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.30  E-value=8.7e-12  Score=90.75  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=62.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-------ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-------AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +++++|||++|+||.+++++|+++|++|++++|+.       ++.+. ...+..    ..+.++.+|++|++++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~----~~v~~v~~D~~d~~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQS----LGVILLEGDINDHETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHH----TTCEEEECCTTCHHHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHh----CCCEEEEeCCCCHHHHHHHHh-
Confidence            46799999999999999999999999999999986       22222 122322    247788999999998887765 


Q ss_pred             HHhcCCCccEEEEccccC
Q 044688          102 FTTKGLPLNILINNAGIM  119 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~  119 (147)
                            ++|+|||++|..
T Consensus        76 ------~~d~vi~~a~~~   87 (307)
T 2gas_A           76 ------QVDIVICAAGRL   87 (307)
T ss_dssp             ------TCSEEEECSSSS
T ss_pred             ------CCCEEEECCccc
Confidence                  599999999864

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.29  E-value=2e-12  Score=100.72  Aligned_cols=106  Identities=12%  Similarity=0.087  Sum_probs=77.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc---chHHHHHHHhhC-------CCCeeEEEEecCCCHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA---GTDVKDAIVKEI-------PTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~---~~~~~~~l~~~~-------~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ..+++||||++|+||..++++|.+.|++|+++.|+...   ...+.+.+...+       ...++.++.+|+++++.+. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            35799999999999999999999999999999998762   233333332211       1357999999999977666 


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           98 FASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                             ...++|+|||||+...     ....++..+++|+.|+.++++
T Consensus       228 -------~~~~~D~Vih~Aa~~~-----~~~~~~~~~~~Nv~gt~~ll~  264 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD-----HFGDDDEFEKVNVQGTVDVIR  264 (508)
T ss_dssp             -------CSSCCSEEEECCCC-------------CCHHHHHHHHHHHHH
T ss_pred             -------CccCCCEEEECCceec-----CCCCHHHHhhhHHHHHHHHHH
Confidence                   3468999999999653     123467788999999888764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.28  E-value=1.9e-11  Score=89.03  Aligned_cols=83  Identities=16%  Similarity=0.250  Sum_probs=64.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc--hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG--TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~--~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .++++|||++|++|.++++.|++.|++|++++|+....  .+..+.+.... ...+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHc------
Confidence            36799999999999999999999999999999985432  22222222111 2357788999999999888776      


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ++|+|||+++..
T Consensus        77 -~~d~vi~~a~~~   88 (308)
T 1qyc_A           77 -NVDVVISTVGSL   88 (308)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -CCCEEEECCcch
Confidence             599999999864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.26  E-value=1.1e-12  Score=95.40  Aligned_cols=96  Identities=16%  Similarity=0.068  Sum_probs=70.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++++++||||++|+||.+++++|+++|+      +....             ...+..+.+|++|.+.+.++++..   
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-------------~~~~~~~~~D~~d~~~~~~~~~~~---   60 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-------------WVFVSSKDADLTDTAQTRALFEKV---   60 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-------------EEECCTTTCCTTSHHHHHHHHHHS---
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-------------ccccCceecccCCHHHHHHHHhhc---
Confidence            36678999999999999999999999997      11000             112333468999999999888753   


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                        ++|+|||+|+.... ...+.++....+++|+.|+.++++
T Consensus        61 --~~d~Vih~A~~~~~-~~~~~~~~~~~~~~nv~gt~~ll~   98 (319)
T 4b8w_A           61 --QPTHVIHLAAMVGG-LFRNIKYNLDFWRKNVHMNDNVLH   98 (319)
T ss_dssp             --CCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             --CCCEEEECceeccc-ccccccCHHHHHHHHHHHHHHHHH
Confidence              69999999997431 112234456789999999888764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.25  E-value=3.2e-11  Score=88.37  Aligned_cols=79  Identities=14%  Similarity=0.200  Sum_probs=62.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-cc----chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AA----GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++|||++|+||.+++++|+++|++|++++|+. ..    ..+....+..    ..+.++.+|++|.+++.++++    
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~----~~v~~v~~D~~d~~~l~~a~~----   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS----MGVTIIEGEMEEHEKMVSVLK----   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc----CCcEEEEecCCCHHHHHHHHc----
Confidence            5699999999999999999999999999999986 21    1111222222    347788999999998888776    


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                         ++|+|||+++..
T Consensus        77 ---~~d~vi~~a~~~   88 (321)
T 3c1o_A           77 ---QVDIVISALPFP   88 (321)
T ss_dssp             ---TCSEEEECCCGG
T ss_pred             ---CCCEEEECCCcc
Confidence               599999999864

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.24  E-value=3.8e-11  Score=87.57  Aligned_cols=84  Identities=11%  Similarity=0.120  Sum_probs=64.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .++++|||++|++|.+++++|++.|++|++++|+.... .+..+.+.... ...+.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHh-------
Confidence            36799999999999999999999999999999985431 11112221110 2357788999999998887765       


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      ++|+|||+++...
T Consensus        76 ~~d~vi~~a~~~~   88 (313)
T 1qyd_A           76 QVDVVISALAGGV   88 (313)
T ss_dssp             TCSEEEECCCCSS
T ss_pred             CCCEEEECCcccc
Confidence            6999999999753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.23  E-value=5.7e-11  Score=86.31  Aligned_cols=78  Identities=14%  Similarity=0.103  Sum_probs=63.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .++++|||++|+||.+++++|+++| ++|++++|++++..  ...+..    ..+.++.+|++|++++.++++       
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~--~~~l~~----~~~~~~~~D~~d~~~l~~~~~-------   71 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKA--AKELRL----QGAEVVQGDQDDQVIMELALN-------   71 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHH--HHHHHH----TTCEEEECCTTCHHHHHHHHT-------
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHH--HHHHHH----CCCEEEEecCCCHHHHHHHHh-------
Confidence            5789999999999999999999998 99999999876432  122322    246788999999999887765       


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      ++|+|||+++..
T Consensus        72 ~~d~vi~~a~~~   83 (299)
T 2wm3_A           72 GAYATFIVTNYW   83 (299)
T ss_dssp             TCSEEEECCCHH
T ss_pred             cCCEEEEeCCCC
Confidence            589999999853

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.21  E-value=3.4e-11  Score=80.33  Aligned_cols=78  Identities=12%  Similarity=0.128  Sum_probs=64.6

Q ss_pred             CchhHHHHHHHHHCCCEEEEEEccCccch---HHHHHHHhhCCCCeeEEEEecCCCH--HHHHHHHHHHHhcCCCccEEE
Q 044688           39 SGIGAETTRVLALRGVHVFMAVRNMAAGT---DVKDAIVKEIPTAKVDVLELDLSSL--ASVRKFASDFTTKGLPLNILI  113 (147)
Q Consensus        39 ~giG~~~a~~l~~~g~~v~~~~r~~~~~~---~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~lv  113 (147)
                      +.++.++++.|++.|++|+++.|+.....   +..+.+.+.  +.++..+++|++++  +++.++++.+.+++|+ |+||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~--G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLV  102 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA--GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLV  102 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT--TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc--CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEE
Confidence            45889999999999999999988754432   234445444  67899999999999  9999999999999999 9999


Q ss_pred             EccccC
Q 044688          114 NNAGIM  119 (147)
Q Consensus       114 ~~ag~~  119 (147)
                      ||||+.
T Consensus       103 nnAgg~  108 (157)
T 3gxh_A          103 HCLANY  108 (157)
T ss_dssp             ECSBSH
T ss_pred             ECCCCC
Confidence            999974

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.21  E-value=6e-11  Score=88.54  Aligned_cols=80  Identities=20%  Similarity=0.204  Sum_probs=64.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEec-CCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD-LSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~  106 (147)
                      .+++++|||++|+||.+++++|+++|++|++++|+.+...  .+.+..   ...+.++.+| ++|++++.++++      
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~------   72 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLFE------   72 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHHT------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh---cCCcEEEECCccCCHHHHHHHHh------
Confidence            4678999999999999999999999999999999876531  123332   1357788999 999999887765      


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       .+|++|||++..
T Consensus        73 -~~d~Vi~~a~~~   84 (352)
T 1xgk_A           73 -GAHLAFINTTSQ   84 (352)
T ss_dssp             -TCSEEEECCCST
T ss_pred             -cCCEEEEcCCCC
Confidence             589999998753

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.21  E-value=2.4e-11  Score=87.82  Aligned_cols=74  Identities=23%  Similarity=0.258  Sum_probs=62.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +++|||++|+||.+++++|.+. |++|+++.|++++...+.        ...+.++.+|++|++++.++++       ++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~-------~~   66 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFK-------GM   66 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTT-------TC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHh-------CC
Confidence            4899999999999999999998 899999999876544321        2468889999999998887765       68


Q ss_pred             cEEEEccccC
Q 044688          110 NILINNAGIM  119 (147)
Q Consensus       110 d~lv~~ag~~  119 (147)
                      |+|||+||..
T Consensus        67 d~vi~~a~~~   76 (289)
T 3e48_A           67 DTVVFIPSII   76 (289)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEeCCCC
Confidence            9999999864

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.19  E-value=4.9e-11  Score=93.16  Aligned_cols=92  Identities=21%  Similarity=0.096  Sum_probs=69.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++++|||||+|.||.++++.|++.|++|++++|+....+                .+.+|+.+..         ...+.+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~----------------~v~~d~~~~~---------~~~l~~  201 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG----------------KRFWDPLNPA---------SDLLDG  201 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT----------------CEECCTTSCC---------TTTTTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc----------------ceeecccchh---------HHhcCC
Confidence            578999999999999999999999999999999865421                1456775431         223457


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+||..... ..+.+..+..+++|+.|+.++++
T Consensus       202 ~D~Vih~A~~~~~~-~~~~~~~~~~~~~Nv~gt~~ll~  238 (516)
T 3oh8_A          202 ADVLVHLAGEPIFG-RFNDSHKEAIRESRVLPTKFLAE  238 (516)
T ss_dssp             CSEEEECCCC------CCGGGHHHHHHHTHHHHHHHHH
T ss_pred             CCEEEECCCCcccc-ccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999975322 45566778899999999988764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.19  E-value=4.3e-13  Score=98.00  Aligned_cols=100  Identities=19%  Similarity=0.116  Sum_probs=61.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++++||||++|+||.+++++|+++|++|++++|+..........+........+.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            5578999999999999999999999999999999976521000001111000123334444443                


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+|+|||+||.....  ...+.....++ |+.++.++++
T Consensus        69 -~~d~vi~~a~~~~~~--~~~~~~~~~~~-n~~~~~~ll~  104 (321)
T 3vps_A           69 -DVRLVYHLASHKSVP--RSFKQPLDYLD-NVDSGRHLLA  104 (321)
T ss_dssp             -TEEEEEECCCCCCHH--HHTTSTTTTHH-HHHHHHHHHH
T ss_pred             -cCCEEEECCccCChH--HHHhCHHHHHH-HHHHHHHHHH
Confidence             799999999975311  01112233455 7777776653

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.18  E-value=1.2e-11  Score=87.22  Aligned_cols=79  Identities=14%  Similarity=0.240  Sum_probs=58.4

Q ss_pred             CCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .||++|||||                +|++|.++|+.++++|++|+++++......        ..+ ..+.  ..|+. 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------~~~-~~~~--~~~v~-   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------EPH-PNLS--IREIT-   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------CCC-TTEE--EEECC-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------cCC-CCeE--EEEHh-
Confidence            5899999999                788999999999999999999999753211        001 1222  23443 


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                        ++.++++.+.+.++++|++|||||+..
T Consensus        70 --s~~em~~~v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           70 --NTKDLLIEMQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             --SHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred             --HHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence              556667777777889999999999864

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.18  E-value=4e-11  Score=86.33  Aligned_cols=73  Identities=18%  Similarity=0.194  Sum_probs=59.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++|||++|+||.+++++|+++  |++|++++|+++....+.    .    ..+.++.+|++|++++.++++       +
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~----~~~~~~~~D~~d~~~~~~~~~-------~   65 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A----QGITVRQADYGDEAALTSALQ-------G   65 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H----TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c----CCCeEEEcCCCCHHHHHHHHh-------C
Confidence            3799999999999999999998  999999999876554332    1    246788999999988877664       5


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      +|+|||+||.
T Consensus        66 ~d~vi~~a~~   75 (286)
T 2zcu_A           66 VEKLLLISSS   75 (286)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEEeCCC
Confidence            8999999985

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.06  E-value=6.6e-10  Score=69.76  Aligned_cols=74  Identities=22%  Similarity=0.222  Sum_probs=59.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +++++|+|+ |++|..+++.|.+.| ++|++++|++++.+.+.    .    ..+..+.+|+++.+.+.++++       
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~~~-------   68 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKALG-------   68 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHHTT-------
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHHHc-------
Confidence            478999999 999999999999999 89999999865544332    1    235567899999887776653       


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      .+|++|++++.
T Consensus        69 ~~d~vi~~~~~   79 (118)
T 3ic5_A           69 GFDAVISAAPF   79 (118)
T ss_dssp             TCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999975

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.05  E-value=1.4e-09  Score=82.80  Aligned_cols=83  Identities=18%  Similarity=0.326  Sum_probs=70.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC---CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG---VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g---~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++++|+|+ |++|.++++.|++.|   .+|++++|+.++.+++.+++.... +.++..+.+|++|.+++.+++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhh----
Confidence            47899998 899999999999998   489999999888888877775532 246888999999999999999876    


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ++|+||||++..
T Consensus        76 -~~DvVin~ag~~   87 (405)
T 4ina_A           76 -KPQIVLNIALPY   87 (405)
T ss_dssp             -CCSEEEECSCGG
T ss_pred             -CCCEEEECCCcc
Confidence             699999999853

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.98  E-value=1.7e-09  Score=77.83  Aligned_cols=70  Identities=14%  Similarity=0.031  Sum_probs=57.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++++|||+ |.||.+++++|+++|++|++++|+.+....+..        ..+.++.+|++|.+            ..++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~------------~~~~   64 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS------------LDGV   64 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC------------CTTC
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc------------cCCC
Confidence            68999998 999999999999999999999998765433321        35788899999833            4579


Q ss_pred             cEEEEccccCC
Q 044688          110 NILINNAGIMA  120 (147)
Q Consensus       110 d~lv~~ag~~~  120 (147)
                      |+|||+|+...
T Consensus        65 d~vi~~a~~~~   75 (286)
T 3ius_A           65 THLLISTAPDS   75 (286)
T ss_dssp             CEEEECCCCBT
T ss_pred             CEEEECCCccc
Confidence            99999999653

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.92  E-value=3.3e-10  Score=88.75  Aligned_cols=95  Identities=19%  Similarity=0.169  Sum_probs=62.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+|+++|||+ ||+|++++..|++.|++|++++|+.++.+++.+++     +.++.    ++.+   +        +.
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~-----~~~~~----~~~d---l--------~~  419 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI-----GGKAL----SLTD---L--------DN  419 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT-----TC-CE----ETTT---T--------TT
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCcee----eHHH---h--------hh
Confidence            467899999999 59999999999999999999999877666555444     22221    2222   1        11


Q ss_pred             --CCCccEEEEccccCC-------CCCCCCHHHHHHhhhhhhhhh
Q 044688          106 --GLPLNILINNAGIMA-------SPFMLSKDNIELQFATNHLGS  141 (147)
Q Consensus       106 --~~~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~N~~g~  141 (147)
                        .+.+|++|||+|+..       +..+.+.+.+..++++|+.+.
T Consensus       420 ~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          420 YHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             C--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence              135899999999742       122355667788999998764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.91  E-value=8.2e-10  Score=82.49  Aligned_cols=76  Identities=16%  Similarity=0.126  Sum_probs=59.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++|||||+|+||++++++|+++|+ +|+.++|+                           +|.+++.++++       .+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~-------~~   47 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALL-------KA   47 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHH-------HC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhc-------cC
Confidence            699999999999999999999998 77776553                           56778887776       48


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+||...+      ++.+..+++|+.++.++++
T Consensus        48 d~Vih~a~~~~~------~~~~~~~~~n~~~~~~l~~   78 (369)
T 3st7_A           48 DFIVHLAGVNRP------EHDKEFSLGNVSYLDHVLD   78 (369)
T ss_dssp             SEEEECCCSBCT------TCSTTCSSSCCBHHHHHHH
T ss_pred             CEEEECCcCCCC------CCHHHHHHHHHHHHHHHHH
Confidence            999999997542      2334567778777766653

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.90  E-value=2.3e-09  Score=82.53  Aligned_cols=78  Identities=17%  Similarity=0.233  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++++++|+| +|++|+++++.|++.|++|++++|+.++.++    +.+..  ..+..+.+|++|.+++.++++       
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~----la~~~--~~~~~~~~Dv~d~~~l~~~l~-------   67 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKK----LSAGV--QHSTPISLDVNDDAALDAEVA-------   67 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHH----TTTTC--TTEEEEECCTTCHHHHHHHHT-------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHH----HHHhc--CCceEEEeecCCHHHHHHHHc-------
Confidence            468899998 7999999999999999999999998554332    22222  236678899999988877654       


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      .+|+||||++..
T Consensus        68 ~~DvVIn~a~~~   79 (450)
T 1ff9_A           68 KHDLVISLIPYT   79 (450)
T ss_dssp             TSSEEEECCC--
T ss_pred             CCcEEEECCccc
Confidence            699999999863

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.90  E-value=3.3e-09  Score=78.35  Aligned_cols=81  Identities=16%  Similarity=0.215  Sum_probs=59.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|++++|+|+++|||..+++.+...|++|++++++.++.+.+ +++     +...   .+|.++.+++.+.+.+...  
T Consensus       144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~-----g~~~---~~d~~~~~~~~~~~~~~~~--  212 (333)
T 1v3u_A          144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI-----GFDA---AFNYKTVNSLEEALKKASP--  212 (333)
T ss_dssp             CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSE---EEETTSCSCHHHHHHHHCT--
T ss_pred             CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc-----CCcE---EEecCCHHHHHHHHHHHhC--
Confidence            3679999999999999999999999999999999876554433 222     3322   3577764445555555433  


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|+|+|.
T Consensus       213 ~~~d~vi~~~g~  224 (333)
T 1v3u_A          213 DGYDCYFDNVGG  224 (333)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCCeEEEECCCh
Confidence            589999999984

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=98.87  E-value=2.9e-08  Score=71.97  Aligned_cols=87  Identities=17%  Similarity=0.159  Sum_probs=62.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||||+|.||..++++|.++|++|+++.|++..              .++.   .|     ..      .......+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~--------------~~~~---~~-----~~------~~~~l~~~d   53 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP--------------GRIT---WD-----EL------AASGLPSCD   53 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT--------------TEEE---HH-----HH------HHHCCCSCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc--------------Ceee---cc-----hh------hHhhccCCC
Confidence            58999999999999999999999999999997542              1211   11     11      122345799


Q ss_pred             EEEEccccC--CCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          111 ILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       111 ~lv~~ag~~--~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+||.||..  .+....+....+..++.|+.++..+.
T Consensus        54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~   90 (298)
T 4b4o_A           54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLA   90 (298)
T ss_dssp             EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHH
Confidence            999999853  22234566667778888988876654

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.86  E-value=8.2e-10  Score=80.32  Aligned_cols=81  Identities=20%  Similarity=0.257  Sum_probs=59.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+++.... .... .+.+|+++.          .+.
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~-~~~~-~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL-NKKF-GEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH-TCCH-HHHEEEECT----------TCC
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc-cccc-ceeEEEeeH----------HHh
Confidence            5789999999997 99999999999999 99999999877777766664321 0010 112344441          345


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                      ++.+|+||||+|...
T Consensus       191 ~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          191 LDGVDIIINATPIGM  205 (287)
T ss_dssp             CTTCCEEEECSCTTC
T ss_pred             hCCCCEEEECCCCCC
Confidence            678999999999753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.83  E-value=7.9e-09  Score=70.82  Aligned_cols=80  Identities=13%  Similarity=0.215  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|+++|+|.++++.+...|++|+++++++++.+.    +++.  +...   .+|.++.+....+.+.. . .+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~----~~~~--g~~~---~~d~~~~~~~~~~~~~~-~-~~  106 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREM----LSRL--GVEY---VGDSRSVDFADEILELT-D-GY  106 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHH----HHTT--CCSE---EEETTCSTHHHHHHHHT-T-TC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HHHc--CCCE---EeeCCcHHHHHHHHHHh-C-CC
Confidence            57899999999999999999999999999999987554332    2222  3332   24777665444443322 1 23


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       107 ~~D~vi~~~g~  117 (198)
T 1pqw_A          107 GVDVVLNSLAG  117 (198)
T ss_dssp             CEEEEEECCCT
T ss_pred             CCeEEEECCch
Confidence            69999999974

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.76  E-value=8e-08  Score=70.74  Aligned_cols=83  Identities=23%  Similarity=0.290  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc---CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN---MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ..+++|+++|+|+ ||+|++++..|++.|+ +|+++.|+   .++.+++.+++.... +..+  ...++.+.+++.+.+.
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~-~~~~--~~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKT-DCKA--QLFDIEDHEQLRKEIA  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHS-SCEE--EEEETTCHHHHHHHHH
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhc-CCce--EEeccchHHHHHhhhc
Confidence            4688999999997 7999999999999998 89999999   667777777776653 2333  3446666665554444


Q ss_pred             HHHhcCCCccEEEEcccc
Q 044688          101 DFTTKGLPLNILINNAGI  118 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~  118 (147)
                             ..|+|||+..+
T Consensus       226 -------~aDiIINaTp~  236 (315)
T 3tnl_A          226 -------ESVIFTNATGV  236 (315)
T ss_dssp             -------TCSEEEECSST
T ss_pred             -------CCCEEEECccC
Confidence                   58999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.75  E-value=4e-08  Score=73.00  Aligned_cols=80  Identities=16%  Similarity=0.127  Sum_probs=60.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+ .++     +...   .+|.++.+++.+.+.++...  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~-----g~~~---~~d~~~~~~~~~~~~~~~~~--  237 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSI-----GGEV---FIDFTKEKDIVGAVLKATDG--  237 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHT-----TCCE---EEETTTCSCHHHHHHHHHTS--
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHc-----CCce---EEecCccHhHHHHHHHHhCC--
Confidence            578999999999999999999999999999999987655322 222     3332   24777555566666665543  


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       238 ~~D~vi~~~g~  248 (347)
T 2hcy_A          238 GAHGVINVSVS  248 (347)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=98.72  E-value=6.8e-09  Score=76.74  Aligned_cols=101  Identities=13%  Similarity=-0.041  Sum_probs=65.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      .+++|||++|.||..++..|+++|.       +|+++++...  .......++...  ....  . .|+.+.+++.+.++
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~--~~~~--~-~di~~~~~~~~a~~   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC--AFPL--L-AGLEATDDPKVAFK   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT--TCTT--E-EEEEEESCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc--cccc--c-CCeEeccChHHHhC
Confidence            4799999999999999999999885       7999988641  122222233321  1111  2 46655444443332


Q ss_pred             HHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          101 DFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                             ..|++||.||..... ..+   ....++.|+.++..+++
T Consensus        80 -------~~D~Vih~Ag~~~~~-~~~---~~~~~~~Nv~~t~~l~~  114 (327)
T 1y7t_A           80 -------DADYALLVGAAPRKA-GME---RRDLLQVNGKIFTEQGR  114 (327)
T ss_dssp             -------TCSEEEECCCCCCCT-TCC---HHHHHHHHHHHHHHHHH
T ss_pred             -------CCCEEEECCCcCCCC-CCC---HHHHHHHHHHHHHHHHH
Confidence                   689999999976422 223   34578899988877653

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.71  E-value=3.8e-08  Score=76.08  Aligned_cols=82  Identities=15%  Similarity=0.212  Sum_probs=60.4

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ....+.+++++|+|+ |++|++++..|++. |++|++++|+.++.+++.+.       ..+..+.+|+++.+++.++++ 
T Consensus        17 ~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~-   87 (467)
T 2axq_A           17 IEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLA-   87 (467)
T ss_dssp             ------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHH-
T ss_pred             cccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHc-
Confidence            344577899999997 99999999999998 67999999986655444322       124566789999888776664 


Q ss_pred             HHhcCCCccEEEEccccC
Q 044688          102 FTTKGLPLNILINNAGIM  119 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~  119 (147)
                            .+|+|||+++..
T Consensus        88 ------~~DvVIn~tp~~   99 (467)
T 2axq_A           88 ------DNDVVISLIPYT   99 (467)
T ss_dssp             ------TSSEEEECSCGG
T ss_pred             ------CCCEEEECCchh
Confidence                  699999999864

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.68  E-value=2.7e-08  Score=73.75  Aligned_cols=81  Identities=15%  Similarity=0.131  Sum_probs=57.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+.+++     +...   .+|.++.+++.+.+.+...  +
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~-----g~~~---~~d~~~~~~~~~~~~~~~~--~  224 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF-----GFDD---AFNYKEESDLTAALKRCFP--N  224 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS-----CCSE---EEETTSCSCSHHHHHHHCT--T
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCce---EEecCCHHHHHHHHHHHhC--C
Confidence            5799999999999999999999999999999998865443332222     3332   2366654344444554432  5


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       225 ~~d~vi~~~g~  235 (345)
T 2j3h_A          225 GIDIYFENVGG  235 (345)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCcEEEECCCH
Confidence            79999999984

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.67  E-value=9.9e-08  Score=70.45  Aligned_cols=80  Identities=13%  Similarity=0.165  Sum_probs=57.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+. ++     +...   .+|.++.+..+.+.+.. . ..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----g~~~---~~d~~~~~~~~~i~~~~-~-~~  213 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KL-----GCHH---TINYSTQDFAEVVREIT-G-GK  213 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHH-T-TC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEECCCHHHHHHHHHHh-C-CC
Confidence            5789999999999999999999999999999999865544332 22     3332   24666655444443332 1 23


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       214 ~~d~vi~~~g~  224 (333)
T 1wly_A          214 GVDVVYDSIGK  224 (333)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCeEEEECCcH
Confidence            69999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.65  E-value=7.2e-08  Score=70.98  Aligned_cols=79  Identities=11%  Similarity=0.135  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ +     +...   .+|.++.+..+.+.+...  ..
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~-----g~~~---~~~~~~~~~~~~~~~~~~--~~  208 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A-----GAWQ---VINYREEDLVERLKEITG--GK  208 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H-----TCSE---EEETTTSCHHHHHHHHTT--TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c-----CCCE---EEECCCccHHHHHHHHhC--CC
Confidence            57999999999999999999999999999999998655443322 2     3332   246666554444443221  23


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|++|+|+|
T Consensus       209 ~~D~vi~~~g  218 (327)
T 1qor_A          209 KVRVVYDSVG  218 (327)
T ss_dssp             CEEEEEECSC
T ss_pred             CceEEEECCc
Confidence            6999999998

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.61  E-value=5.3e-08  Score=70.18  Aligned_cols=76  Identities=14%  Similarity=0.231  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...  + .+.  ..|.   +++       . .
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--~-~~~--~~~~---~~~-------~-~  178 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--G-SIQ--ALSM---DEL-------E-G  178 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--S-SEE--ECCS---GGG-------T-T
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--C-Cee--EecH---HHh-------c-c
Confidence            578999999998 79999999999999999999999987776666655332  1 221  1232   211       1 1


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                       +.+|+||||++..
T Consensus       179 -~~~DivVn~t~~~  191 (271)
T 1nyt_A          179 -HEFDLIINATSSG  191 (271)
T ss_dssp             -CCCSEEEECCSCG
T ss_pred             -CCCCEEEECCCCC
Confidence             5899999999865

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.61  E-value=1.4e-07  Score=70.34  Aligned_cols=80  Identities=11%  Similarity=0.164  Sum_probs=57.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|..+++.+...|++|+++++++++.+.+ .++     +...   .+|.++.+..+.+.+.. . ..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~~~~~~-~-~~  230 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL-----GAAA---GFNYKKEDFSEATLKFT-K-GA  230 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSE---EEETTTSCHHHHHHHHT-T-TS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc-----CCcE---EEecCChHHHHHHHHHh-c-CC
Confidence            578999999999999999999999999999999986655443 333     3332   24666654444433321 1 23


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       231 ~~d~vi~~~G~  241 (354)
T 2j8z_A          231 GVNLILDCIGG  241 (354)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCc
Confidence            69999999985

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.59  E-value=1.2e-07  Score=70.05  Aligned_cols=81  Identities=14%  Similarity=0.223  Sum_probs=57.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|++++|+|++|++|...++.+...|++|+++++++++.+.+.+++     +...   ..|..+.+....+ .+..  .
T Consensus       148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~-----g~~~---~~~~~~~~~~~~~-~~~~--~  216 (336)
T 4b7c_A          148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL-----GFDG---AIDYKNEDLAAGL-KREC--P  216 (336)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-----CCSE---EEETTTSCHHHHH-HHHC--T
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCCE---EEECCCHHHHHHH-HHhc--C
Confidence            36899999999999999999999999999999998866544432322     3332   2466554433333 3332  3


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|+|+|.
T Consensus       217 ~~~d~vi~~~g~  228 (336)
T 4b7c_A          217 KGIDVFFDNVGG  228 (336)
T ss_dssp             TCEEEEEESSCH
T ss_pred             CCceEEEECCCc
Confidence            479999999984

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.59  E-value=2.1e-07  Score=60.28  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=57.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ..++++|+|+ |.+|..+++.|.+.|++|++++++++..+.+.    ..    .+.++.+|.++++.+.++      ...
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~----~~----~~~~~~gd~~~~~~l~~~------~~~   69 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE----DE----GFDAVIADPTDESFYRSL------DLE   69 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEECCTTCHHHHHHS------CCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH----HC----CCcEEECCCCCHHHHHhC------Ccc
Confidence            3467999998 77999999999999999999999866544333    22    245778999998876543      234


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ..|.+|.+.+
T Consensus        70 ~~d~vi~~~~   79 (141)
T 3llv_A           70 GVSAVLITGS   79 (141)
T ss_dssp             TCSEEEECCS
T ss_pred             cCCEEEEecC
Confidence            6899998876

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.58  E-value=1e-07  Score=71.05  Aligned_cols=80  Identities=13%  Similarity=0.163  Sum_probs=55.8

Q ss_pred             CC--CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           28 TG--LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        28 ~~--~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .|  ++++|+|++|+||..+++.+...|+ +|++++++.++.+.+.+++     +...   .+|.++.+... .+.+...
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~-----g~~~---~~d~~~~~~~~-~~~~~~~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL-----GFDA---AINYKKDNVAE-QLRESCP  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS-----CCSE---EEETTTSCHHH-HHHHHCT
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc-----CCce---EEecCchHHHH-HHHHhcC
Confidence            46  8999999999999999999999999 9999998765444332212     3332   34666643333 3333322


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                        +++|++|+|+|.
T Consensus       229 --~~~d~vi~~~G~  240 (357)
T 2zb4_A          229 --AGVDVYFDNVGG  240 (357)
T ss_dssp             --TCEEEEEESCCH
T ss_pred             --CCCCEEEECCCH
Confidence              279999999983

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.56  E-value=2.1e-07  Score=69.86  Aligned_cols=78  Identities=13%  Similarity=0.172  Sum_probs=59.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|+|+ |++|..+++.+...|++|+++++++++.+.+.+.+     +..   +.+|.++.+++.+.+.     
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~-----g~~---~~~~~~~~~~l~~~~~-----  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF-----GGR---VITLTATEANIKKSVQ-----  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTS---EEEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc-----Cce---EEEecCCHHHHHHHHh-----
Confidence            477899999999 99999999999999999999999866554433222     333   3467777777766654     


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                        ..|++|++++..
T Consensus       229 --~~DvVi~~~g~~  240 (369)
T 2eez_A          229 --HADLLIGAVLVP  240 (369)
T ss_dssp             --HCSEEEECCC--
T ss_pred             --CCCEEEECCCCC
Confidence              589999999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.55  E-value=2.5e-07  Score=68.89  Aligned_cols=80  Identities=16%  Similarity=0.252  Sum_probs=56.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|++|++|..+++.+...|++|+++++++++.+.+    ++.  +...   .+|.++.+..+++.+..  ...
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~--ga~~---~~d~~~~~~~~~~~~~~--~~~  238 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQN--GAHE---VFNHREVNYIDKIKKYV--GEK  238 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHT--TCSE---EEETTSTTHHHHHHHHH--CTT
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHc--CCCE---EEeCCCchHHHHHHHHc--CCC
Confidence            578999999999999999999999999999999886654422    222  3332   24666654444433322  123


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       239 ~~D~vi~~~G~  249 (351)
T 1yb5_A          239 GIDIIIEMLAN  249 (351)
T ss_dssp             CEEEEEESCHH
T ss_pred             CcEEEEECCCh
Confidence            79999999984

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.53  E-value=8.2e-08  Score=61.98  Aligned_cols=77  Identities=12%  Similarity=0.053  Sum_probs=54.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +.+++++|+|+ |.+|..+++.|.+.|++|++++++++..+.    +...  +  ...+.+|.++.+.+.++      ..
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~----~~~~--~--~~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA----YASY--A--THAVIANATEENELLSL------GI   68 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT----TTTT--C--SEEEECCTTCHHHHHTT------TG
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh--C--CEEEEeCCCCHHHHHhc------CC
Confidence            45678999998 999999999999999999999987543222    2211  2  34567898887655432      12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      ...|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            468999999874

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.52  E-value=3.4e-07  Score=66.49  Aligned_cols=80  Identities=18%  Similarity=0.269  Sum_probs=60.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++....++.++.  ..+..+   +.+.+.    
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~--~~~~~~---l~~~l~----  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVV--GVDARG---IEDVIA----  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEE--EECSTT---HHHHHH----
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEE--EcCHHH---HHHHHh----
Confidence            578999999998 7999999999999998 79999999888888888877653333333  233323   333333    


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                         ..|+|||+...
T Consensus       194 ---~~DiVInaTp~  204 (283)
T 3jyo_A          194 ---AADGVVNATPM  204 (283)
T ss_dssp             ---HSSEEEECSST
T ss_pred             ---cCCEEEECCCC
Confidence               47999999864

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.48  E-value=1.2e-06  Score=64.43  Aligned_cols=84  Identities=18%  Similarity=0.270  Sum_probs=61.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc---CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN---MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~---~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      ..+.+|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++.... +..+.  ..+..+.+...+.+.
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~-~~~v~--~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENT-DCVVT--VTDLADQHAFTEALA  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHS-SCEEE--EEETTCHHHHHHHHH
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhcc-CcceE--EechHhhhhhHhhcc
Confidence            4578999999997 8999999999999998 89999999   666777777776553 23333  345555433333333


Q ss_pred             HHHhcCCCccEEEEccccC
Q 044688          101 DFTTKGLPLNILINNAGIM  119 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~  119 (147)
                             ..|+|||+....
T Consensus       220 -------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 -------SADILTNGTKVG  231 (312)
T ss_dssp             -------HCSEEEECSSTT
T ss_pred             -------CceEEEECCcCC
Confidence                   479999997653

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.46  E-value=5.5e-07  Score=66.82  Aligned_cols=80  Identities=15%  Similarity=0.156  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+++++|+|+++++|..+++.+... |++|+++++++++.+.+ .++     +...   ..|.++.+..+. +.+.... 
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~-----g~~~---~~~~~~~~~~~~-~~~~~~~-  238 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRA-----GADY---VINASMQDPLAE-IRRITES-  238 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHH-----TCSE---EEETTTSCHHHH-HHHHTTT-
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCCE---EecCCCccHHHH-HHHHhcC-
Confidence            6789999999999999999999998 99999999886654433 222     3332   235555443333 2332221 


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|+|+|.
T Consensus       239 ~~~d~vi~~~g~  250 (347)
T 1jvb_A          239 KGVDAVIDLNNS  250 (347)
T ss_dssp             SCEEEEEESCCC
T ss_pred             CCceEEEECCCC
Confidence            589999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.40  E-value=1.4e-06  Score=64.91  Aligned_cols=79  Identities=19%  Similarity=0.320  Sum_probs=56.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|...++.+...|++|+++++++++.+.+. ++     +....   .|..+.+....+ .+..  .+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~~---~~~~~~~~~~~~-~~~~--~~  234 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RL-----GAKRG---INYRSEDFAAVI-KAET--GQ  234 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSEE---EETTTSCHHHHH-HHHH--SS
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCCEE---EeCCchHHHHHH-HHHh--CC
Confidence            5789999999999999999999999999999999876554332 23     33322   355554433333 3333  45


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       235 g~Dvvid~~g~  245 (353)
T 4dup_A          235 GVDIILDMIGA  245 (353)
T ss_dssp             CEEEEEESCCG
T ss_pred             CceEEEECCCH
Confidence            79999999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.36  E-value=2.6e-06  Score=63.06  Aligned_cols=79  Identities=19%  Similarity=0.251  Sum_probs=56.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++++|+|++|++|...++.+...|++|+++++++++.+.+. ++     +...   .+|.++.+ +.+.+.+... ..
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~-----ga~~---~~d~~~~~-~~~~~~~~~~-~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL-----GADE---TVNYTHPD-WPKEVRRLTG-GK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTSTT-HHHHHHHHTT-TT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCE---EEcCCccc-HHHHHHHHhC-CC
Confidence            5789999999999999999999999999999999866554432 22     3332   24666654 3222333221 23


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|++|+++|
T Consensus       235 ~~d~vi~~~g  244 (343)
T 2eih_A          235 GADKVVDHTG  244 (343)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.35  E-value=2.5e-06  Score=56.04  Aligned_cols=78  Identities=17%  Similarity=0.083  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .++.++|.|+ |.+|..+++.|.+.|++|+++++++ +..+.+....     ...+.++..|.++++.+.+.      ..
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~~i~gd~~~~~~l~~a------~i   69 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-----GDNADVIPGDSNDSSVLKKA------GI   69 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-----CTTCEEEESCTTSHHHHHHH------TT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-----cCCCeEEEcCCCCHHHHHHc------Ch
Confidence            3567889986 9999999999999999999999974 3333333222     12366788999988766543      12


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      ...|.+|.+.+
T Consensus        70 ~~ad~vi~~~~   80 (153)
T 1id1_A           70 DRCRAILALSD   80 (153)
T ss_dssp             TTCSEEEECSS
T ss_pred             hhCCEEEEecC
Confidence            36788887765

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.33  E-value=2.6e-06  Score=62.96  Aligned_cols=81  Identities=16%  Similarity=0.199  Sum_probs=56.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|++++|+|+++++|...+..+...|++|+++++++++.+.+.+ +     +....   .|..+.+..+.+.+ .. ..
T Consensus       143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l-----ga~~~---~~~~~~~~~~~~~~-~~-~~  211 (340)
T 3gms_A          143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L-----GAAYV---IDTSTAPLYETVME-LT-NG  211 (340)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H-----TCSEE---EETTTSCHHHHHHH-HT-TT
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C-----CCcEE---EeCCcccHHHHHHH-Hh-CC
Confidence            357899999999999999999888899999999998876554432 3     33322   35554433333322 21 12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|+|+|.
T Consensus       212 ~g~Dvvid~~g~  223 (340)
T 3gms_A          212 IGADAAIDSIGG  223 (340)
T ss_dssp             SCEEEEEESSCH
T ss_pred             CCCcEEEECCCC
Confidence            379999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.32  E-value=2.5e-06  Score=61.47  Aligned_cols=77  Identities=12%  Similarity=0.175  Sum_probs=56.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+.+...  + .+..  .|+   +++.        .
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--~-~~~~--~~~---~~~~--------~  178 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--G-NIQA--VSM---DSIP--------L  178 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--S-CEEE--EEG---GGCC--------C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--C-CeEE--eeH---HHhc--------c
Confidence            578899999998 79999999999999999999999988777777766432  1 2222  232   1110        1


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                       +..|+|||+++...
T Consensus       179 -~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 -QTYDLVINATSAGL  192 (272)
T ss_dssp             -SCCSEEEECCCC--
T ss_pred             -CCCCEEEECCCCCC
Confidence             47999999998653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.30  E-value=1.9e-06  Score=63.53  Aligned_cols=81  Identities=17%  Similarity=0.256  Sum_probs=55.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|++++|+|++|++|...+..+...|++|+++++++++.+.+ .++     +....   .|..+.+....+.+ .. ..
T Consensus       147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~-----ga~~~---~~~~~~~~~~~~~~-~~-~~  215 (334)
T 3qwb_A          147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEY-----GAEYL---INASKEDILRQVLK-FT-NG  215 (334)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCSEE---EETTTSCHHHHHHH-HT-TT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc-----CCcEE---EeCCCchHHHHHHH-Hh-CC
Confidence            3678999999999999999999999999999999976554422 222     33322   35544443333322 21 12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|+|+|.
T Consensus       216 ~g~D~vid~~g~  227 (334)
T 3qwb_A          216 KGVDASFDSVGK  227 (334)
T ss_dssp             SCEEEEEECCGG
T ss_pred             CCceEEEECCCh
Confidence            369999999984

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.30  E-value=3.4e-06  Score=60.05  Aligned_cols=83  Identities=14%  Similarity=0.281  Sum_probs=63.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|..+++.|+..|. ++++++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            367889999996 7999999999999997 899999986                   6677777888887777777777


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      ..++++ +.+.++++       ..|+||.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            766653 33443333       5788887764

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.27  E-value=1.4e-06  Score=66.80  Aligned_cols=86  Identities=19%  Similarity=0.246  Sum_probs=56.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEe--cCC---------CHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--DLS---------SLASV   95 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~--D~~---------~~~~~   95 (147)
                      -.|++++|+|++|++|...+..+...|++|+++.+++++.+.+ .++     +....+-..  |+.         +.+++
T Consensus       219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~~i~~~~~~~~~~~~~~~~~~~~~~  292 (447)
T 4a0s_A          219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RAL-----GCDLVINRAELGITDDIADDPRRVVETG  292 (447)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT-----TCCCEEEHHHHTCCTTGGGCHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hhc-----CCCEEEecccccccccccccccccchhh
Confidence            3579999999999999999999989999999998875554433 222     443322221  221         12334


Q ss_pred             HHHHHHHHhcC-CCccEEEEcccc
Q 044688           96 RKFASDFTTKG-LPLNILINNAGI  118 (147)
Q Consensus        96 ~~~~~~~~~~~-~~id~lv~~ag~  118 (147)
                      ..+.+++.+.. .++|++|+++|.
T Consensus       293 ~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          293 RKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             hHHHHHHHHHhCCCceEEEECCCc
Confidence            44445554433 369999999984

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.25  E-value=1.8e-06  Score=63.52  Aligned_cols=80  Identities=16%  Similarity=0.209  Sum_probs=55.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|...++.+...|++|+++++++++.+.+. ++     +...   ..|..+.+....+.+..  ...
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~---~~~~~~~~~~~~~~~~~--~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL-----GAWE---TIDYSHEDVAKRVLELT--DGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSE---EEETTTSCHHHHHHHHT--TTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCE---EEeCCCccHHHHHHHHh--CCC
Confidence            5789999999999999999999999999999998866544332 22     3332   23555544333333221  123


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       209 g~Dvvid~~g~  219 (325)
T 3jyn_A          209 KCPVVYDGVGQ  219 (325)
T ss_dssp             CEEEEEESSCG
T ss_pred             CceEEEECCCh
Confidence            69999999984

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=98.20  E-value=1.6e-05  Score=57.86  Aligned_cols=91  Identities=12%  Similarity=0.340  Sum_probs=70.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      .+.+++|+|.|+ ||+|..+++.|+..|. ++.+++.+.                  .+.+.+.+.+++.+|..++..+.
T Consensus        33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~  111 (292)
T 3h8v_A           33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHN  111 (292)
T ss_dssp             GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEec
Confidence            467889999987 7899999999999996 899988765                  56677788888888888888888


Q ss_pred             ecCCCHHHHHHHHHHHHhc----CCCccEEEEccc
Q 044688           87 LDLSSLASVRKFASDFTTK----GLPLNILINNAG  117 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~----~~~id~lv~~ag  117 (147)
                      .++++.+.+..+++.+...    ....|+||.+..
T Consensus       112 ~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          112 YNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             CCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            8888877777666544221    136888887653

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.19  E-value=9.6e-06  Score=60.04  Aligned_cols=79  Identities=28%  Similarity=0.375  Sum_probs=53.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|...+..+...|++|++++++.++.+.+. ++     +....   .|..  +++.+.+.+.. ...
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~v---~~~~--~~~~~~v~~~~-~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SV-----GADIV---LPLE--EGWAKAVREAT-GGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSEE---EESS--TTHHHHHHHHT-TTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcEE---ecCc--hhHHHHHHHHh-CCC
Confidence            5889999999999999999999999999999999877654332 23     33322   2333  22333333322 112


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       227 g~Dvvid~~g~  237 (342)
T 4eye_A          227 GVDMVVDPIGG  237 (342)
T ss_dssp             CEEEEEESCC-
T ss_pred             CceEEEECCch
Confidence            69999999985

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.19  E-value=1.9e-06  Score=62.89  Aligned_cols=77  Identities=21%  Similarity=0.170  Sum_probs=54.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.+++++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+.+....  ..       +.+.+++.       +
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~-------~~~~~~~~-------~  200 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SA-------YFSLAEAE-------T  200 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CC-------EECHHHHH-------H
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--Cc-------eeeHHHHH-------h
Confidence            577899999997 7899999999999998 99999999777666655442210  01       11222222       2


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                      .....|+|||+++..
T Consensus       201 ~~~~aDivIn~t~~~  215 (297)
T 2egg_A          201 RLAEYDIIINTTSVG  215 (297)
T ss_dssp             TGGGCSEEEECSCTT
T ss_pred             hhccCCEEEECCCCC
Confidence            234699999999864

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.18  E-value=2.4e-07  Score=71.69  Aligned_cols=43  Identities=19%  Similarity=0.292  Sum_probs=37.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD   68 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   68 (147)
                      .++.||+++|||++ +||+++|+.|...|++|+++++++....+
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~  303 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQ  303 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHH
Confidence            45899999999987 99999999999999999999988654433

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.16  E-value=6.2e-06  Score=52.75  Aligned_cols=75  Identities=16%  Similarity=0.242  Sum_probs=52.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++.++|+|+ |.+|..+++.|.+.|++|++++++++..+.+    ....   .+..+..|.++.+.+.+.      ....
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~----~~~~---~~~~~~~d~~~~~~l~~~------~~~~   69 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA----SAEI---DALVINGDCTKIKTLEDA------GIED   69 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHC---SSEEEESCTTSHHHHHHT------TTTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH----HHhc---CcEEEEcCCCCHHHHHHc------Cccc
Confidence            357889987 9999999999999999999999876544333    2221   234566788776654321      1236


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      .|++|.+.+
T Consensus        70 ~d~vi~~~~   78 (140)
T 1lss_A           70 ADMYIAVTG   78 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEeeC
Confidence            888888865

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.16  E-value=6.5e-06  Score=63.29  Aligned_cols=85  Identities=16%  Similarity=0.218  Sum_probs=58.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEe--c--------CCCHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL--D--------LSSLASVRK   97 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~--D--------~~~~~~~~~   97 (147)
                      .|.+++|+|++|++|...+..+...|++|+++++++++.+.+ .++     +....+-..  |        ..+.+++.+
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l-----Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~  301 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM-----GAEAIIDRNAEGYRFWKDENTQDPKEWKR  301 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH-----TCCEEEETTTTTCCSEEETTEECHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh-----CCcEEEecCcCcccccccccccchHHHHH
Confidence            578999999999999999998888999999988775554433 333     443222111  1        234556666


Q ss_pred             HHHHHHhcC--CCccEEEEcccc
Q 044688           98 FASDFTTKG--LPLNILINNAGI  118 (147)
Q Consensus        98 ~~~~~~~~~--~~id~lv~~ag~  118 (147)
                      +.+.+.+..  .++|++|.++|.
T Consensus       302 ~~~~i~~~t~g~g~Dvvid~~G~  324 (456)
T 3krt_A          302 FGKRIRELTGGEDIDIVFEHPGR  324 (456)
T ss_dssp             HHHHHHHHHTSCCEEEEEECSCH
T ss_pred             HHHHHHHHhCCCCCcEEEEcCCc
Confidence            666665532  379999999984

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.16  E-value=5e-06  Score=54.69  Aligned_cols=79  Identities=9%  Similarity=0.071  Sum_probs=53.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ....++.++|+|+ |.+|..+++.|.+.|++|++++++++..+.+..   .    .....+..|.++.+.+.+.      
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSHHHHHTT------
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCHHHHHHc------
Confidence            3466789999996 999999999999999999999998766543221   1    1233456777765543321      


Q ss_pred             cCCCccEEEEccc
Q 044688          105 KGLPLNILINNAG  117 (147)
Q Consensus       105 ~~~~id~lv~~ag  117 (147)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1235788888776

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.16  E-value=5.5e-06  Score=61.86  Aligned_cols=75  Identities=24%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.|++++|+|+ |++|...++.+...|++|++++++.   ++.+ ...++     +..  .+  | .+ +-.+.+ .+ .
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~~~~-----ga~--~v--~-~~-~~~~~~-~~-~  243 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT-VIEET-----KTN--YY--N-SS-NGYDKL-KD-S  243 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH-HHHHH-----TCE--EE--E-CT-TCSHHH-HH-H
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH-HHHHh-----CCc--ee--c-hH-HHHHHH-HH-h
Confidence            45899999999 9999999999999999999999986   4432 22223     433  22  5 44 222222 22 2


Q ss_pred             hcCCCccEEEEcccc
Q 044688          104 TKGLPLNILINNAGI  118 (147)
Q Consensus       104 ~~~~~id~lv~~ag~  118 (147)
                      .  +++|++|+++|.
T Consensus       244 ~--~~~d~vid~~g~  256 (366)
T 2cdc_A          244 V--GKFDVIIDATGA  256 (366)
T ss_dssp             H--CCEEEEEECCCC
T ss_pred             C--CCCCEEEECCCC
Confidence            2  579999999985

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=98.14  E-value=1.5e-05  Score=57.79  Aligned_cols=76  Identities=14%  Similarity=0.274  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++...   ..+.....+  +   +.       
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~---~~~~~~~~~--~---l~-------  185 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY---GEVKAQAFE--Q---LK-------  185 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGG--G---CC-------
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc---CCeeEeeHH--H---hc-------
Confidence            4578999999998 7999999999999996 9999999988888887777543   123333221  1   10       


Q ss_pred             hcCCCccEEEEccccC
Q 044688          104 TKGLPLNILINNAGIM  119 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~  119 (147)
                         ...|+|||+....
T Consensus       186 ---~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 ---QSYDVIINSTSAS  198 (281)
T ss_dssp             ---SCEEEEEECSCCC
T ss_pred             ---CCCCEEEEcCcCC
Confidence               3689999987653

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.14  E-value=1.4e-05  Score=59.27  Aligned_cols=79  Identities=13%  Similarity=0.050  Sum_probs=54.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++++|+||+|++|...+..+...|++|+++++++++.+.+. ++     +....   .|..+.+....+ .+... ..+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~-----Ga~~~---~~~~~~~~~~~v-~~~~~-~~g  233 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI-----GAAHV---LNEKAPDFEATL-REVMK-AEQ  233 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH-----TCSEE---EETTSTTHHHHH-HHHHH-HHC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCCEE---EECCcHHHHHHH-HHHhc-CCC
Confidence            389999999999999999988889999999999877654433 33     33322   344443333333 22221 126


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      +|++|+|+|.
T Consensus       234 ~D~vid~~g~  243 (349)
T 3pi7_A          234 PRIFLDAVTG  243 (349)
T ss_dssp             CCEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999884

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.12  E-value=1.6e-05  Score=59.41  Aligned_cols=77  Identities=14%  Similarity=0.171  Sum_probs=55.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +.+++++|+|+ |++|+.++..+...|++|++++|++++.+.+.+...     ..+..   +..+.+++.+.+.      
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~---~~~~~~~~~~~~~------  229 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVEL---LYSNSAEIETAVA------  229 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEE---EECCHHHHHHHHH------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEe---eeCCHHHHHHHHc------
Confidence            56799999999 999999999999999999999998776665544332     12211   2223444433332      


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ..|++|++++..
T Consensus       230 -~~DvVI~~~~~~  241 (361)
T 1pjc_A          230 -EADLLIGAVLVP  241 (361)
T ss_dssp             -TCSEEEECCCCT
T ss_pred             -CCCEEEECCCcC
Confidence             689999999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.10  E-value=1.4e-05  Score=59.72  Aligned_cols=79  Identities=14%  Similarity=0.132  Sum_probs=54.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|...++.+...|++|+++++++++.+.+.    +.  +....   .|..+.+ +.+.+.+..  .+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~--Ga~~~---~~~~~~~-~~~~~~~~~--~~  230 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SL--GCDRP---INYKTEP-VGTVLKQEY--PE  230 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT--TCSEE---EETTTSC-HHHHHHHHC--TT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----Hc--CCcEE---EecCChh-HHHHHHHhc--CC
Confidence            5789999999999999999999999999999998755443332    22  43322   2444332 333333332  24


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+|+|.
T Consensus       231 g~D~vid~~g~  241 (362)
T 2c0c_A          231 GVDVVYESVGG  241 (362)
T ss_dssp             CEEEEEECSCT
T ss_pred             CCCEEEECCCH
Confidence            79999999984

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.07  E-value=1.2e-05  Score=60.54  Aligned_cols=78  Identities=14%  Similarity=0.152  Sum_probs=56.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.+++++|+|+ |+||..+++.+...|++|+++++++++.+.+.+.+     +..+   ..+..+.+++.+.+.     
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~-----g~~~---~~~~~~~~~l~~~l~-----  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF-----CGRI---HTRYSSAYELEGAVK-----  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----TTSS---EEEECCHHHHHHHHH-----
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc-----CCee---EeccCCHHHHHHHHc-----
Confidence            478999999998 99999999999999999999999866554443322     3332   123344555544443     


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                        ..|++|++++..
T Consensus       231 --~aDvVi~~~~~p  242 (377)
T 2vhw_A          231 --RADLVIGAVLVP  242 (377)
T ss_dssp             --HCSEEEECCCCT
T ss_pred             --CCCEEEECCCcC
Confidence              589999988754

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.04  E-value=2e-05  Score=58.22  Aligned_cols=77  Identities=14%  Similarity=0.066  Sum_probs=54.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|+ |++|...++.+...|++|+++++++++.+.+.    +.  +...   .+|.++.+ +.+.+.+..   +
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~l--Ga~~---~~d~~~~~-~~~~~~~~~---~  229 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK----EL--GADL---VVNPLKED-AAKFMKEKV---G  229 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HT--TCSE---EECTTTSC-HHHHHHHHH---S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HC--CCCE---EecCCCcc-HHHHHHHHh---C
Confidence            5789999999 88999999999999999999998866544332    22  3332   24665543 322333332   5


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+++|.
T Consensus       230 ~~d~vid~~g~  240 (339)
T 1rjw_A          230 GVHAAVVTAVS  240 (339)
T ss_dssp             SEEEEEESSCC
T ss_pred             CCCEEEECCCC
Confidence            79999999985

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.03  E-value=5.2e-05  Score=55.97  Aligned_cols=78  Identities=17%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++||||+|.+|..++..|+.+|  ..|++++++++  .....++.......++..    +++..++.+.++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            479999999999999999999988  68999988765  223334443211112222    223334444333       


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      ..|++|+++|...
T Consensus        76 gaDvVi~~ag~~~   88 (326)
T 1smk_A           76 GMDLIIVPAGVPR   88 (326)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEcCCcCC
Confidence            6899999999754

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.03  E-value=1.1e-05  Score=60.36  Aligned_cols=72  Identities=17%  Similarity=0.201  Sum_probs=55.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ..+++|.|+ |.+|+.+++.|++ ..+|.+.+++.+.++.+         ...+..+.+|++|.+++.++++       .
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~---------~~~~~~~~~d~~d~~~l~~~~~-------~   77 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV---------KEFATPLKVDASNFDKLVEVMK-------E   77 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH---------TTTSEEEECCTTCHHHHHHHHT-------T
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH---------hccCCcEEEecCCHHHHHHHHh-------C
Confidence            346999998 9999999999865 57899999875543322         1234567899999998887765       5


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      .|+|||+++.
T Consensus        78 ~DvVi~~~p~   87 (365)
T 3abi_A           78 FELVIGALPG   87 (365)
T ss_dssp             CSEEEECCCG
T ss_pred             CCEEEEecCC
Confidence            8999999875

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.03  E-value=1.9e-05  Score=57.33  Aligned_cols=73  Identities=16%  Similarity=0.175  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~  106 (147)
                      .|++++|+|++|++|...+..+...|++|+++++++++.+.+. ++     +....   .|..+ .+ +   .+.+    
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~-----ga~~~---~~~~~~~~-~---~~~~----  187 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEEA---ATYAEVPE-R---AKAW----  187 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSEE---EEGGGHHH-H---HHHT----
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc-----CCCEE---EECCcchh-H---HHHh----
Confidence            5789999999999999999999899999999999877665442 22     33321   34443 22 2   2222    


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|+ +|.
T Consensus       188 ~~~d~vid-~g~  198 (302)
T 1iz0_A          188 GGLDLVLE-VRG  198 (302)
T ss_dssp             TSEEEEEE-CSC
T ss_pred             cCceEEEE-CCH
Confidence            47999999 874

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=98.00  E-value=2.7e-05  Score=57.61  Aligned_cols=77  Identities=21%  Similarity=0.366  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|+++||+|++|++|...+..+...|++|+++ +++++.+. ..++     +...    +| .+.+ +.+.+.+.. ...
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~-~~~l-----Ga~~----i~-~~~~-~~~~~~~~~-~~~  215 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY-VRDL-----GATP----ID-ASRE-PEDYAAEHT-AGQ  215 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH-HHHH-----TSEE----EE-TTSC-HHHHHHHHH-TTS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH-HHHc-----CCCE----ec-cCCC-HHHHHHHHh-cCC
Confidence            57899999999999999999999999999998 66544332 2223     4443    34 3332 333333322 223


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+++|.
T Consensus       216 g~D~vid~~g~  226 (343)
T 3gaz_A          216 GFDLVYDTLGG  226 (343)
T ss_dssp             CEEEEEESSCT
T ss_pred             CceEEEECCCc
Confidence            69999999984

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.99  E-value=2.2e-05  Score=58.20  Aligned_cols=78  Identities=14%  Similarity=0.139  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+||+|++|...++.+...|++|+++++++++.+.+. ++     +....   .|..+  ++.+.+.+.  ..+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~--~~~~~~~~~--~~~  216 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KM-----GADIV---LNHKE--SLLNQFKTQ--GIE  216 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HH-----TCSEE---ECTTS--CHHHHHHHH--TCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hc-----CCcEE---EECCc--cHHHHHHHh--CCC
Confidence            5899999999999999999999899999999998765544332 23     33322   23332  232333333  334


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+++|.
T Consensus       217 g~Dvv~d~~g~  227 (346)
T 3fbg_A          217 LVDYVFCTFNT  227 (346)
T ss_dssp             CEEEEEESSCH
T ss_pred             CccEEEECCCc
Confidence            79999999874

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.98  E-value=3.7e-05  Score=54.71  Aligned_cols=82  Identities=13%  Similarity=0.270  Sum_probs=57.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  103 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTAL  103 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence            367889999998 7799999999999997 788886542                   4556677778887777777766


Q ss_pred             EecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           86 ELDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      ..+++. +.+.++++       ..|+||++.
T Consensus       104 ~~~~~~-~~~~~~~~-------~~DvVi~~~  126 (251)
T 1zud_1          104 QQRLTG-EALKDAVA-------RADVVLDCT  126 (251)
T ss_dssp             CSCCCH-HHHHHHHH-------HCSEEEECC
T ss_pred             eccCCH-HHHHHHHh-------cCCEEEECC
Confidence            655543 33333333       356666654

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.94  E-value=5.9e-05  Score=55.34  Aligned_cols=94  Identities=18%  Similarity=0.174  Sum_probs=59.7

Q ss_pred             CCCCE-EEEecCCC-----------------c-hhHHHHHHHHHCCCEEEEEEccCccch------HH--HHHHHhhC-C
Q 044688           27 ATGLT-AIVTGASS-----------------G-IGAETTRVLALRGVHVFMAVRNMAAGT------DV--KDAIVKEI-P   78 (147)
Q Consensus        27 ~~~~~-~litG~~~-----------------g-iG~~~a~~l~~~g~~v~~~~r~~~~~~------~~--~~~l~~~~-~   78 (147)
                      +.||+ +|||+|..                 | .|.++|+.+++.|+.|+++++......      ..  .+.+.... .
T Consensus        34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~  113 (313)
T 1p9o_A           34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA  113 (313)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred             hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence            67887 99998854                 4 999999999999999999988543211      00  11000000 0


Q ss_pred             CCeeEEEEecCCCHHHHHHHHHHH------------------------------HhcCCCccEEEEccccCC
Q 044688           79 TAKVDVLELDLSSLASVRKFASDF------------------------------TTKGLPLNILINNAGIMA  120 (147)
Q Consensus        79 ~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~~~id~lv~~ag~~~  120 (147)
                      ...+..+..|+.+.+++.+.+.+.                              .+.++..|++|.+|++.+
T Consensus       114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsD  185 (313)
T 1p9o_A          114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSD  185 (313)
T ss_dssp             CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCS
T ss_pred             ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhh
Confidence            112345566666555555544433                              345678999999999875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.93  E-value=3.9e-05  Score=57.28  Aligned_cols=75  Identities=13%  Similarity=0.134  Sum_probs=53.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+.+     +...   ..|..+.+.+.+       ..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~---v~~~~~~~~~~~-------~~~  250 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF-----GADS---FLVSRDQEQMQA-------AAG  250 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS-----CCSE---EEETTCHHHHHH-------TTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----CCce---EEeccCHHHHHH-------hhC
Confidence            6899999995 99999999999889999999998876654433222     3332   235555443322       224


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+++|.
T Consensus       251 ~~D~vid~~g~  261 (366)
T 1yqd_A          251 TLDGIIDTVSA  261 (366)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCc
Confidence            79999999985

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=97.91  E-value=1.2e-05  Score=59.44  Aligned_cols=100  Identities=12%  Similarity=-0.064  Sum_probs=61.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEEcc----CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-------HVFMAVRN----MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~----~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ..+++|||++|.+|..++..|+..|.       .|++.+++    .++.+....++....  ....   .|+....+...
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~--~~~~---~~i~~~~~~~~   79 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCA--FPLL---AGMTAHADPMT   79 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTT--CTTE---EEEEEESSHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhc--cccc---CcEEEecCcHH
Confidence            35799999999999999999999885       78998887    433444444454321  0111   23333233333


Q ss_pred             HHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhh
Q 044688           98 FASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l  144 (147)
                      .+       ...|++|++||..... ..+..   ..+..|+..+..+
T Consensus        80 al-------~~aD~Vi~~ag~~~~~-g~~r~---dl~~~N~~i~~~i  115 (329)
T 1b8p_A           80 AF-------KDADVALLVGARPRGP-GMERK---DLLEANAQIFTVQ  115 (329)
T ss_dssp             HT-------TTCSEEEECCCCCCCT-TCCHH---HHHHHHHHHHHHH
T ss_pred             Hh-------CCCCEEEEeCCCCCCC-CCCHH---HHHHHHHHHHHHH
Confidence            32       2689999999975422 22332   3456666655443

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.88  E-value=5.1e-05  Score=56.78  Aligned_cols=77  Identities=22%  Similarity=0.322  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|++++|+|++|++|...++.+...|++|+++++ .++.+ ...++     +....   .|..+.+..+    ++.+ .+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~-~~~~l-----Ga~~v---~~~~~~~~~~----~~~~-~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASE-LVRKL-----GADDV---IDYKSGSVEE----QLKS-LK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHH-HHHHT-----TCSEE---EETTSSCHHH----HHHT-SC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHH-HHHHc-----CCCEE---EECCchHHHH----HHhh-cC
Confidence            5789999999999999999988889999988874 33332 22222     43322   2444433222    2222 25


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      ++|++|+++|..
T Consensus       248 g~D~vid~~g~~  259 (375)
T 2vn8_A          248 PFDFILDNVGGS  259 (375)
T ss_dssp             CBSEEEESSCTT
T ss_pred             CCCEEEECCCCh
Confidence            799999998853

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.87  E-value=6.8e-05  Score=48.38  Aligned_cols=73  Identities=10%  Similarity=0.028  Sum_probs=53.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      +.++|.|. |.+|..+++.|.+.|++|++++++++..+.+.    +.    .+..+..|.++++.+.++      .....
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~----g~~~i~gd~~~~~~l~~a------~i~~a   72 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ER----GVRAVLGNAANEEIMQLA------HLECA   72 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HT----TCEEEESCTTSHHHHHHT------TGGGC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----Hc----CCCEEECCCCCHHHHHhc------CcccC
Confidence            46778887 88999999999999999999999876544433    22    245677899888766542      11257


Q ss_pred             cEEEEccc
Q 044688          110 NILINNAG  117 (147)
Q Consensus       110 d~lv~~ag  117 (147)
                      |.+|.+.+
T Consensus        73 d~vi~~~~   80 (140)
T 3fwz_A           73 KWLILTIP   80 (140)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEECC
Confidence            88887765

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.86  E-value=7.7e-06  Score=53.13  Aligned_cols=71  Identities=11%  Similarity=0.174  Sum_probs=50.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++++|.|+ |++|..+++.|.+.|++|++++|+.++.+++.+++     +..+    .+..+.   .+.++       .
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----~~~~----~~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----EYEY----VLINDI---DSLIK-------N   80 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----TCEE----EECSCH---HHHHH-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----CCce----EeecCH---HHHhc-------C
Confidence            789999996 99999999999999999999999877666655544     2221    122232   22232       5


Q ss_pred             ccEEEEccccC
Q 044688          109 LNILINNAGIM  119 (147)
Q Consensus       109 id~lv~~ag~~  119 (147)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            78888887753

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.86  E-value=1.8e-05  Score=53.30  Aligned_cols=78  Identities=13%  Similarity=0.081  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.++.++|.| .|.+|..+++.|.+. |++|+++++++++.+.+    ...  +  +..+.+|.++.+.+.++     .
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~--g--~~~~~gd~~~~~~l~~~-----~  101 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSE--G--RNVISGDATDPDFWERI-----L  101 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHT--T--CCEEECCTTCHHHHHTB-----C
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHC--C--CCEEEcCCCCHHHHHhc-----c
Confidence            45677888998 499999999999999 99999999986554432    222  2  33456788776544321     0


Q ss_pred             cCCCccEEEEccc
Q 044688          105 KGLPLNILINNAG  117 (147)
Q Consensus       105 ~~~~id~lv~~ag  117 (147)
                      .....|.+|.+.+
T Consensus       102 ~~~~ad~vi~~~~  114 (183)
T 3c85_A          102 DTGHVKLVLLAMP  114 (183)
T ss_dssp             SCCCCCEEEECCS
T ss_pred             CCCCCCEEEEeCC
Confidence            1336788887765

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.75  E-value=0.00013  Score=54.14  Aligned_cols=63  Identities=14%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+++++++|.|+ ||+|.++++.|+..|. ++.+++++.                   .+.+.+.+.+++.+|..++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            367899999998 7899999999999997 788887643                   3456677888888887788777


Q ss_pred             EecC
Q 044688           86 ELDL   89 (147)
Q Consensus        86 ~~D~   89 (147)
                      ..++
T Consensus       110 ~~~i  113 (340)
T 3rui_A          110 KLSI  113 (340)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7655

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.74  E-value=4.6e-05  Score=52.78  Aligned_cols=73  Identities=12%  Similarity=0.092  Sum_probs=52.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|.|+ |.+|..+++.|.+.|.+|++++++++..+.+.+.       ..+.++..|.++++.+.+.      .....|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a------~i~~ad   67 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDA------EVSKND   67 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHH------TCCTTC
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhc------CcccCC
Confidence            4889996 8999999999999999999999987655443321       1345678888887766533      123577


Q ss_pred             EEEEccc
Q 044688          111 ILINNAG  117 (147)
Q Consensus       111 ~lv~~ag  117 (147)
                      .+|.+.+
T Consensus        68 ~vi~~~~   74 (218)
T 3l4b_C           68 VVVILTP   74 (218)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            7776654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.73  E-value=0.00012  Score=52.57  Aligned_cols=43  Identities=19%  Similarity=0.171  Sum_probs=38.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      +++++|.|+ ||.|++++..|++.|.+|+++.|+.++.+++. ++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~  160 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL  160 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence            899999997 89999999999999999999999988877776 44

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.72  E-value=5.5e-05  Score=55.48  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=48.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|+|++|++|...++.+...|++|+.+++++++.+.+. ++     +....   .|..+.+  ...+.++  ..+++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l-----Ga~~~---i~~~~~~--~~~~~~~--~~~~~d  218 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEV---LAREDVM--AERIRPL--DKQRWA  218 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEE---EECC-----------C--CSCCEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-Hc-----CCcEE---EecCCcH--HHHHHHh--cCCccc
Confidence            7999999999999999988889999999999876654432 22     43322   2444332  1222222  124799


Q ss_pred             EEEEcccc
Q 044688          111 ILINNAGI  118 (147)
Q Consensus       111 ~lv~~ag~  118 (147)
                      ++|+++|.
T Consensus       219 ~vid~~g~  226 (328)
T 1xa0_A          219 AAVDPVGG  226 (328)
T ss_dssp             EEEECSTT
T ss_pred             EEEECCcH
Confidence            99999884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.71  E-value=0.00016  Score=53.75  Aligned_cols=86  Identities=14%  Similarity=0.144  Sum_probs=51.9

Q ss_pred             CC-CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH--HHHHHHHHHHHh
Q 044688           28 TG-LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL--ASVRKFASDFTT  104 (147)
Q Consensus        28 ~~-~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~  104 (147)
                      .| .+++|+|++|++|...+..+...|++++.+.++.++..+..+.+++.  +....+   |..+.  +++.+.+.++..
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~l--Ga~~vi---~~~~~~~~~~~~~i~~~t~  240 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVI---TEDQNNSREFGPTIKEWIK  240 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEE---EHHHHHCGGGHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhc--CCeEEE---ecCccchHHHHHHHHHHhh
Confidence            46 89999999999999998887788999988887665422222223332  443221   21110  122222232220


Q ss_pred             -cCCCccEEEEcccc
Q 044688          105 -KGLPLNILINNAGI  118 (147)
Q Consensus       105 -~~~~id~lv~~ag~  118 (147)
                       ..+++|++|.++|.
T Consensus       241 ~~~~g~Dvvid~~G~  255 (364)
T 1gu7_A          241 QSGGEAKLALNCVGG  255 (364)
T ss_dssp             HHTCCEEEEEESSCH
T ss_pred             ccCCCceEEEECCCc
Confidence             12479999999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.70  E-value=0.00015  Score=53.96  Aligned_cols=78  Identities=14%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+.+ .++     +....   .| .+.+++.+.+.+... ..
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~-~~~~~~~~~v~~~~~-g~  256 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL-----GADHG---IN-RLEEDWVERVYALTG-DR  256 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH-----TCSEE---EE-TTTSCHHHHHHHHHT-TC
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc-----CCCEE---Ec-CCcccHHHHHHHHhC-CC
Confidence            578999999 89999999998888999999999876654432 233     44322   24 332233333333322 23


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|++|+++|
T Consensus       257 g~D~vid~~g  266 (363)
T 3uog_A          257 GADHILEIAG  266 (363)
T ss_dssp             CEEEEEEETT
T ss_pred             CceEEEECCC
Confidence            6999999998

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.70  E-value=5.4e-05  Score=54.55  Aligned_cols=75  Identities=13%  Similarity=0.242  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+.+|+++|+|+ ||+|++++..|++.|+ +|+++.|+.++.+++.+++..    ..+...  +..+   +.       
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~--~~~~---l~-------  178 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRIS--RYEA---LE-------  178 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEE--CSGG---GT-------
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEe--eHHH---hc-------
Confidence            3578999999998 7999999999999996 999999998877777776632    123332  2211   11       


Q ss_pred             hcCCCccEEEEcccc
Q 044688          104 TKGLPLNILINNAGI  118 (147)
Q Consensus       104 ~~~~~id~lv~~ag~  118 (147)
                      .  ...|+|||+...
T Consensus       179 ~--~~~DivInaTp~  191 (272)
T 3pwz_A          179 G--QSFDIVVNATSA  191 (272)
T ss_dssp             T--CCCSEEEECSSG
T ss_pred             c--cCCCEEEECCCC
Confidence            1  368999999754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.70  E-value=0.00011  Score=55.81  Aligned_cols=47  Identities=26%  Similarity=0.410  Sum_probs=39.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   73 (147)
                      .+.|++++|.|+ |++|..+++.|...|+ +|++++|+.++.+++...+
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~  211 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL  211 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            478999999998 9999999999999998 9999999876655555444

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.65  E-value=1.4e-05  Score=57.73  Aligned_cols=43  Identities=16%  Similarity=0.086  Sum_probs=37.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDV   69 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   69 (147)
                      .+.+|+++|+|+ ||+|++++..|.+.|+ +|+++.|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            578899999997 7999999999999998 899999997765543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.64  E-value=0.00014  Score=53.83  Aligned_cols=79  Identities=19%  Similarity=0.221  Sum_probs=52.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...++.+...|+ +|+++++++++.+.+ .++     +....   .|..+.+ +.+.+.+.. ..
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~-----Ga~~~---~~~~~~~-~~~~v~~~~-~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKV-----GADYV---INPFEED-VVKEVMDIT-DG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHH-----TCSEE---ECTTTSC-HHHHHHHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCEE---ECCCCcC-HHHHHHHHc-CC
Confidence            6889999999 9999999999888999 999999886544332 223     33221   3544433 222223221 11


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|+++|.
T Consensus       235 ~g~D~vid~~g~  246 (348)
T 2d8a_A          235 NGVDVFLEFSGA  246 (348)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            269999999884

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=97.62  E-value=0.00012  Score=54.73  Aligned_cols=65  Identities=17%  Similarity=0.372  Sum_probs=50.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++|+|.|+ ||+|..+++.|+..|. ++.+++++.                   .+.+.+.+.+.+.+|..++..+
T Consensus       115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~  193 (353)
T 3h5n_A          115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI  193 (353)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence            366889999998 7899999999999997 899988753                   2455667778888777777766


Q ss_pred             EecCCC
Q 044688           86 ELDLSS   91 (147)
Q Consensus        86 ~~D~~~   91 (147)
                      ..++++
T Consensus       194 ~~~i~~  199 (353)
T 3h5n_A          194 ALNIND  199 (353)
T ss_dssp             ECCCCS
T ss_pred             ecccCc
Confidence            555443

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.61  E-value=0.00044  Score=51.82  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHHh
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFTT  104 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~  104 (147)
                      .|.++||+| +|++|...++.+...| ++|+++++++++.+.+. ++     +....   .|..  +.+++.+.+.+...
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~~~~~~~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EI-----GADLT---LNRRETSVEERRKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HT-----TCSEE---EETTTSCHHHHHHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-Hc-----CCcEE---EeccccCcchHHHHHHHHhC
Confidence            478999999 8999999999888899 59999998865544332 22     43322   2333  13344333333321


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                       ..++|++|+++|.
T Consensus       265 -g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 -GRGADFILEATGD  277 (380)
T ss_dssp             -TSCEEEEEECSSC
T ss_pred             -CCCCcEEEECCCC
Confidence             1269999999984

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.60  E-value=0.00047  Score=50.29  Aligned_cols=96  Identities=17%  Similarity=0.143  Sum_probs=58.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEc--cCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVR--NMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++||||+|.+|..++..|+..+.  .+++.++  ++++++....++..... ..++.... +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            689999999999999999998874  6888888  65444333344433210 12222222 2  2211           


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhh
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l  144 (147)
                      +...|++|++||..... ..+..   ..+..|+.++..+
T Consensus        68 ~~~aDvVi~~ag~~~~~-g~~r~---dl~~~N~~i~~~i  102 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-GQTRI---DLAGDNAPIMEDI  102 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-TCCHH---HHHHHHHHHHHHH
T ss_pred             hCCCCEEEEcCCCCCCC-CCCHH---HHHHHHHHHHHHH
Confidence            23799999999975322 22332   3466776665544

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.57  E-value=0.00041  Score=51.52  Aligned_cols=83  Identities=16%  Similarity=0.131  Sum_probs=56.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.++||+|+ |++|...+..+...|++ |+++++++++.+.+ .++ .    ..+..+..|-.+.+++.+.+.+... .
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-~----~~~~~~~~~~~~~~~~~~~v~~~t~-g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFA-KEI-C----PEVVTHKVERLSAEESAKKIVESFG-G  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHH-C----TTCEEEECCSCCHHHHHHHHHHHTS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-c----hhcccccccccchHHHHHHHHHHhC-C
Confidence            5789999998 99999999888889997 88898876654433 333 2    2344444554455555544444321 2


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       251 ~g~Dvvid~~g~  262 (363)
T 3m6i_A          251 IEPAVALECTGV  262 (363)
T ss_dssp             CCCSEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            369999999884

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.56  E-value=0.00018  Score=53.50  Aligned_cols=74  Identities=15%  Similarity=0.191  Sum_probs=52.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCH-HHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL-ASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+.+. ++     +....   .|..+. +.    .+++.   
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---~~~~~~~~~----~~~~~---  241 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM-----GADHY---IATLEEGDW----GEKYF---  241 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH-----TCSEE---EEGGGTSCH----HHHSC---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-Hc-----CCCEE---EcCcCchHH----HHHhh---
Confidence            5789999999 99999999888888999999999877655443 23     33322   233322 21    22222   


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       242 ~~~D~vid~~g~  253 (360)
T 1piw_A          242 DTFDLIVVCASS  253 (360)
T ss_dssp             SCEEEEEECCSC
T ss_pred             cCCCEEEECCCC
Confidence            579999999986

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.54  E-value=0.00046  Score=51.59  Aligned_cols=74  Identities=18%  Similarity=0.247  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++||+|+ |++|...+..+...|++|+++++++++.+.+. ++     +....   .|..+.+.+    +++.   +
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~~~~----~~~~---~  256 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-AL-----GADEV---VNSRNADEM----AAHL---K  256 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HH-----TCSEE---EETTCHHHH----HTTT---T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc-----CCcEE---eccccHHHH----HHhh---c
Confidence            5789999997 88999999888889999999998877655443 33     43321   355554322    2222   5


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|+++|.
T Consensus       257 g~Dvvid~~g~  267 (369)
T 1uuf_A          257 SFDFILNTVAA  267 (369)
T ss_dssp             CEEEEEECCSS
T ss_pred             CCCEEEECCCC
Confidence            79999999885

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.53  E-value=0.00071  Score=50.19  Aligned_cols=79  Identities=22%  Similarity=0.211  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHHh
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFTT  104 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~  104 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   .|..  +.++..+.+.+...
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~~~~~~~~~i~~~~~  240 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI-----GADLV---LQISKESPQEIARKVEGQLG  240 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSEE---EECSSCCHHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-----CCCEE---EcCcccccchHHHHHHHHhC
Confidence            5789999995 8999999888888899 899999875543322 222     44321   2443  22333333333322


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                        +++|++|.++|.
T Consensus       241 --~g~D~vid~~g~  252 (356)
T 1pl8_A          241 --CKPEVTIECTGA  252 (356)
T ss_dssp             --SCCSEEEECSCC
T ss_pred             --CCCCEEEECCCC
Confidence              479999999974

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.53  E-value=0.00035  Score=51.91  Aligned_cols=78  Identities=17%  Similarity=0.172  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+... |++|+++++++++.+.+. ++     +....   .|..+.  +.+.+.++.. .
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~--~~~~v~~~~~-g  252 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RL-----GADHV---VDARRD--PVKQVMELTR-G  252 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HT-----TCSEE---EETTSC--HHHHHHHHTT-T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-Hh-----CCCEE---Eeccch--HHHHHHHHhC-C
Confidence            5789999999 89999998888788 999999998765544332 22     43322   344443  3333333321 1


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (359)
T 1h2b_A          253 RGVNVAMDFVGS  264 (359)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCCcEEEECCCC
Confidence            269999999884

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=97.53  E-value=0.00027  Score=56.10  Aligned_cols=62  Identities=15%  Similarity=0.252  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus       324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~  402 (615)
T 4gsl_A          324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVK  402 (615)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEee
Confidence            57889999998 7899999999999997 899988753                   35566778888888888888777


Q ss_pred             ecC
Q 044688           87 LDL   89 (147)
Q Consensus        87 ~D~   89 (147)
                      .++
T Consensus       403 ~~I  405 (615)
T 4gsl_A          403 LSI  405 (615)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            655

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.52  E-value=0.00077  Score=49.87  Aligned_cols=80  Identities=21%  Similarity=0.149  Sum_probs=51.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHh--
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTT--  104 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~--  104 (147)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+.+    ++.  +....   .|..+ .+...++.+ ...  
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~l--Ga~~~---~~~~~~~~~~~~i~~-~~~~~  236 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNC--GADVT---LVVDPAKEEESSIIE-RIRSA  236 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHT--TCSEE---EECCTTTSCHHHHHH-HHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHh--CCCEE---EcCcccccHHHHHHH-Hhccc
Confidence            5789999996 8999999988888999999998876544332    222  44322   24433 222223222 221  


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                      ...++|++|+++|.
T Consensus       237 ~g~g~D~vid~~g~  250 (352)
T 1e3j_A          237 IGDLPNVTIDCSGN  250 (352)
T ss_dssp             SSSCCSEEEECSCC
T ss_pred             cCCCCCEEEECCCC
Confidence            12369999999974

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.52  E-value=8.2e-05  Score=54.96  Aligned_cols=77  Identities=17%  Similarity=0.229  Sum_probs=51.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ + .    ..    ..|..+.+ +.+.+.+..  .
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a----~~----v~~~~~~~-~~~~~~~~~--~  229 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-A----DR----LVNPLEED-LLEVVRRVT--G  229 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-C----SE----EECTTTSC-HHHHHHHHH--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-H----Hh----ccCcCccC-HHHHHHHhc--C
Confidence            6889999999 9999999998888999 99999987654332211 1 1    11    13444432 333334333  3


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|+++|.
T Consensus       230 ~g~D~vid~~g~  241 (343)
T 2dq4_A          230 SGVEVLLEFSGN  241 (343)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCCEEEECCCC
Confidence            469999999874

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=97.52  E-value=0.00026  Score=56.05  Aligned_cols=63  Identities=14%  Similarity=0.224  Sum_probs=50.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc-------------------CccchHHHHHHHhhCCCCeeEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN-------------------MAAGTDVKDAIVKEIPTAKVDVL   85 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~   85 (147)
                      .+.+++|+|.|+ ||+|.++++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+
T Consensus       324 kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~  402 (598)
T 3vh1_A          324 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  402 (598)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEE
Confidence            356789999987 7899999999999997 78888553                   14567778888888888788777


Q ss_pred             EecC
Q 044688           86 ELDL   89 (147)
Q Consensus        86 ~~D~   89 (147)
                      ..++
T Consensus       403 ~~~I  406 (598)
T 3vh1_A          403 KLSI  406 (598)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            7664

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.50  E-value=0.00026  Score=51.91  Aligned_cols=100  Identities=14%  Similarity=0.116  Sum_probs=58.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEc--cCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVR--NMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r--~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++|||++|++|..++..|+..|.  .+.++++  +.++.+....++...  ..+.++.....+  |  ++.+.      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~--d--~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES--D--ENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE--T--TCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC--c--chHHH------
Confidence            589999999999999999998874  6888888  544333323333221  111122222211  0  11111      


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                       +...|++||+||..... ..+.   ...+..|+.++..++
T Consensus        72 -l~gaD~Vi~~Ag~~~~~-g~~r---~dl~~~N~~i~~~i~  107 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKE-GMSR---MDLAKTNAKIVGKYA  107 (313)
T ss_dssp             -GTTCSEEEECCSCCCCT-TCCH---HHHHHHHHHHHHHHH
T ss_pred             -hCCCCEEEECCCCCCCC-CCcH---HHHHHHHHHHHHHHH
Confidence             23799999999975322 2232   335777777765543

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.49  E-value=0.00038  Score=51.95  Aligned_cols=79  Identities=15%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++.+.+. ++     +....   .|..+ .+++.+.+.++.. 
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l-----Ga~~v---i~~~~~~~~~~~~~~~~~~-  260 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VF-----GATDF---VNPNDHSEPISQVLSKMTN-  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HT-----TCCEE---ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-Hh-----CCceE---EeccccchhHHHHHHHHhC-
Confidence            5789999995 9999999998888998 8999998876654332 22     43321   24332 1234444444433 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|+++|.
T Consensus       261 -~g~D~vid~~g~  272 (374)
T 1cdo_A          261 -GGVDFSLECVGN  272 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999974

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.49  E-value=0.00021  Score=52.62  Aligned_cols=76  Identities=13%  Similarity=0.083  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+.+ .++     +....   .|..+.+..+.+.+    ..+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~~---i~~~~~~~~~~~~~----~~g  231 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRL-----GAEVA---VNARDTDPAAWLQK----EIG  231 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHT-----TCSEE---EETTTSCHHHHHHH----HHS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc-----CCCEE---EeCCCcCHHHHHHH----hCC
Confidence            6789999986 8999999988888999999999886654432 222     43322   34444333333322    235


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|++|.++|
T Consensus       232 ~~d~vid~~g  241 (340)
T 3s2e_A          232 GAHGVLVTAV  241 (340)
T ss_dssp             SEEEEEESSC
T ss_pred             CCCEEEEeCC
Confidence            7999999986

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.47  E-value=0.0005  Score=51.36  Aligned_cols=79  Identities=14%  Similarity=0.116  Sum_probs=51.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|.+++|+|++|++|...+..+...|++|+.+. ++++.+ ...++     +....   .|..+.+ +.+.+.+..  .
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~l-----Ga~~v---i~~~~~~-~~~~v~~~t--~  229 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSR-----GAEEV---FDYRAPN-LAQTIRTYT--K  229 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHT-----TCSEE---EETTSTT-HHHHHHHHT--T
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHc-----CCcEE---EECCCch-HHHHHHHHc--c
Confidence            4678999999999999999998888999998876 444332 33332     43322   2444433 222233222  2


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       230 g~~d~v~d~~g~  241 (371)
T 3gqv_A          230 NNLRYALDCITN  241 (371)
T ss_dssp             TCCCEEEESSCS
T ss_pred             CCccEEEECCCc
Confidence            459999998874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.45  E-value=0.00031  Score=52.52  Aligned_cols=80  Identities=21%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH-hc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT-TK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~-~~  105 (147)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++.+ +.+++     +....   .|.++.+... .+.+.. ..
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~l-----Ga~~v---i~~~~~~~~~-~i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEV-----GATAT---VDPSAGDVVE-AIAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH-----TCSEE---ECTTSSCHHH-HHHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc-----CCCEE---ECCCCcCHHH-HHHhhhhcc
Confidence            5789999997 8999999888888999 8888888765433 33333     33321   3444433222 222211 12


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      .+++|++|.++|.
T Consensus       251 ~gg~Dvvid~~G~  263 (370)
T 4ej6_A          251 PGGVDVVIECAGV  263 (370)
T ss_dssp             TTCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999883

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.44  E-value=0.00023  Score=52.64  Aligned_cols=69  Identities=19%  Similarity=0.246  Sum_probs=49.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+.+. ++     +....+     ++.+.+.+          
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~v~-----~~~~~~~~----------  233 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SM-----GVKHFY-----TDPKQCKE----------  233 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HT-----TCSEEE-----SSGGGCCS----------
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hc-----CCCeec-----CCHHHHhc----------
Confidence            5889999997 99999999888889999999999877655332 22     443333     23332211          


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|.++|.
T Consensus       234 ~~D~vid~~g~  244 (348)
T 3two_A          234 ELDFIISTIPT  244 (348)
T ss_dssp             CEEEEEECCCS
T ss_pred             CCCEEEECCCc
Confidence            78999998874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.43  E-value=0.00028  Score=52.46  Aligned_cols=75  Identities=17%  Similarity=0.202  Sum_probs=51.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+ |++|...+..+...|++|+++++++++.+.+.+++     +....   .|..+.+.+.       +..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~l-----Ga~~v---i~~~~~~~~~-------~~~~  243 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDL-----GADDY---VIGSDQAKMS-------ELAD  243 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTS-----CCSCE---EETTCHHHHH-------HSTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHc-----CCcee---eccccHHHHH-------HhcC
Confidence            6889999995 99999999888888999999998876544333222     33321   2444443222       2224


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|++|.++|.
T Consensus       244 g~D~vid~~g~  254 (357)
T 2cf5_A          244 SLDYVIDTVPV  254 (357)
T ss_dssp             TEEEEEECCCS
T ss_pred             CCCEEEECCCC
Confidence            79999999984

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.43  E-value=0.00046  Score=51.52  Aligned_cols=79  Identities=13%  Similarity=0.137  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.+++|+| +|++|...+..+...|+ +|+.+++++++.+.+ .++     +....   .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~G-aG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~~~~~~~~~~~~~~~~~~-  259 (374)
T 2jhf_A          191 QGSTCAVFG-LGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV-----GATEC---VNPQDYKKPIQEVLTEMSN-  259 (374)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSEE---ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCceE---ecccccchhHHHHHHHHhC-
Confidence            578999999 59999999998888999 899999887665433 222     33321   24332 1223333444322 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|+++|.
T Consensus       260 -~g~D~vid~~g~  271 (374)
T 2jhf_A          260 -GGVDFSFEVIGR  271 (374)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCcEEEECCCC
Confidence             479999999874

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.43  E-value=0.0003  Score=52.43  Aligned_cols=78  Identities=10%  Similarity=0.138  Sum_probs=49.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|++|++|...+..+.. .|++|+++++++++.+.+ .++     +....   .|..+  ++.+.+.+.  ..
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~l-----Gad~v---i~~~~--~~~~~v~~~--~~  237 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSL-----GAHHV---IDHSK--PLAAEVAAL--GL  237 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHT-----TCSEE---ECTTS--CHHHHHHTT--CS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHc-----CCCEE---EeCCC--CHHHHHHHh--cC
Confidence            578999999999999988776665 588999999876544332 222     43322   23332  122222222  23


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       238 ~g~Dvvid~~g~  249 (363)
T 4dvj_A          238 GAPAFVFSTTHT  249 (363)
T ss_dssp             CCEEEEEECSCH
T ss_pred             CCceEEEECCCc
Confidence            479999998873

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.41  E-value=0.00051  Score=51.21  Aligned_cols=79  Identities=13%  Similarity=0.115  Sum_probs=52.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   .|..+ .+++.+.+.++.. 
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~~~~~~~~~~~~v~~~~~-  258 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF-----GATEC---INPQDFSKPIQEVLIEMTD-  258 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH-----TCSEE---ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCceE---eccccccccHHHHHHHHhC-
Confidence            5789999995 9999999988888898 899999887665433 233     33321   23332 1223333443322 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|+++|.
T Consensus       259 -~g~D~vid~~g~  270 (373)
T 2fzw_A          259 -GGVDYSFECIGN  270 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.39  E-value=0.00025  Score=53.07  Aligned_cols=79  Identities=9%  Similarity=0.066  Sum_probs=52.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   .|..+ .+++.+.+.++.  
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~~~~~~~~i~~~~--  260 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKF-----GVNEF---VNPKDHDKPIQEVIVDLT--  260 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTT-----TCCEE---ECGGGCSSCHHHHHHHHT--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc-----CCcEE---EccccCchhHHHHHHHhc--
Confidence            5789999998 9999999988888898 899999887765422 222     44322   23331 223333444432  


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      .+++|++|.++|.
T Consensus       261 ~gg~D~vid~~g~  273 (378)
T 3uko_A          261 DGGVDYSFECIGN  273 (378)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2379999999885

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.38  E-value=0.00064  Score=50.75  Aligned_cols=79  Identities=18%  Similarity=0.157  Sum_probs=52.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   .|..+ .+++.+.+.++.. 
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~~~~~~~~v~~~~~-  263 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KAL-----GATDC---LNPRELDKPVQDVITELTA-  263 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSEE---ECGGGCSSCHHHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHh-----CCcEE---EccccccchHHHHHHHHhC-
Confidence            5789999995 9999999988888899 899999887665433 222     43322   24332 1223333444332 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|.++|.
T Consensus       264 -~g~Dvvid~~G~  275 (376)
T 1e3i_A          264 -GGVDYSLDCAGT  275 (376)
T ss_dssp             -SCBSEEEESSCC
T ss_pred             -CCccEEEECCCC
Confidence             479999999974

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=97.38  E-value=0.00043  Score=50.59  Aligned_cols=75  Identities=13%  Similarity=0.223  Sum_probs=49.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|.+++|+|++|++|...+..+...|++|+.+.+.. + .+...++     +...   ..|..+.+.+.+       ..
T Consensus       151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~l-----Ga~~---~i~~~~~~~~~~-------~~  213 (321)
T 3tqh_A          151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKAL-----GAEQ---CINYHEEDFLLA-------IS  213 (321)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHH-----TCSE---EEETTTSCHHHH-------CC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHc-----CCCE---EEeCCCcchhhh-------hc
Confidence            3678999999999999999999988999998887542 2 2233333     4432   124444331211       12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|+++.++|.
T Consensus       214 ~g~D~v~d~~g~  225 (321)
T 3tqh_A          214 TPVDAVIDLVGG  225 (321)
T ss_dssp             SCEEEEEESSCH
T ss_pred             cCCCEEEECCCc
Confidence            479999999874

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.36  E-value=0.00038  Score=51.68  Aligned_cols=38  Identities=24%  Similarity=0.408  Sum_probs=31.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .|.++||+|++|++|...+..+...|++++.+.+..+.
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPD  204 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccc
Confidence            57899999999999999888777789988877765443

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.32  E-value=0.0004  Score=52.07  Aligned_cols=80  Identities=19%  Similarity=0.217  Sum_probs=52.1

Q ss_pred             CCCEEEEec-CCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTG-ASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG-~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.| ++|++|...+..+...|++|+.+++++++.+.+. ++     +....   .|..+.+..+++.+....  
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~l-----Ga~~~---~~~~~~~~~~~v~~~t~~--  238 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQ-----GAVHV---CNAASPTFMQDLTEALVS--  238 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HT-----TCSCE---EETTSTTHHHHHHHHHHH--
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hC-----CCcEE---EeCCChHHHHHHHHHhcC--
Confidence            578899987 8999999999888888999999998765544332 22     43322   244443322332222111  


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       239 ~g~d~v~d~~g~  250 (379)
T 3iup_A          239 TGATIAFDATGG  250 (379)
T ss_dssp             HCCCEEEESCEE
T ss_pred             CCceEEEECCCc
Confidence            269999999984

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.29  E-value=0.0037  Score=45.81  Aligned_cols=77  Identities=17%  Similarity=0.132  Sum_probs=50.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++.|+|++|.+|..++..|+..|  ..|+++++++  .+....++.......++....    ...+....++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            58899999999999999999888  6899999986  333344454321111222211    0122333333       6


Q ss_pred             ccEEEEccccCC
Q 044688          109 LNILINNAGIMA  120 (147)
Q Consensus       109 id~lv~~ag~~~  120 (147)
                      .|++|+++|...
T Consensus        69 aDvVvi~ag~~~   80 (314)
T 1mld_A           69 CDVVVIPAGVPR   80 (314)
T ss_dssp             CSEEEECCSCCC
T ss_pred             CCEEEECCCcCC
Confidence            899999999764

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.29  E-value=0.00027  Score=49.31  Aligned_cols=72  Identities=14%  Similarity=0.082  Sum_probs=50.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+.++|.|+ |.+|..+++.|.+.|+ |++++++++..+.+.     .  +  +.++.+|.++++.+.+.      ....
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~--~~~i~gd~~~~~~l~~a------~i~~   71 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--G--ANFVHGDPTRVSDLEKA------NVRG   71 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--T--CEEEESCTTCHHHHHHT------TCTT
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--C--CeEEEcCCCCHHHHHhc------Ccch
Confidence            467889997 8999999999999999 999998866543322     1  2  55677888887655432      1235


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (234)
T 2aef_A           72 ARAVIVDLE   80 (234)
T ss_dssp             CSEEEECCS
T ss_pred             hcEEEEcCC
Confidence            677776654

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.28  E-value=0.00066  Score=50.36  Aligned_cols=73  Identities=16%  Similarity=0.234  Sum_probs=49.0

Q ss_pred             CEEEEecCCCchhHHH-HHHH-HHCCCE-EEEEEccCc---cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAET-TRVL-ALRGVH-VFMAVRNMA---AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        30 ~~~litG~~~giG~~~-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+|+ |++|... +..+ ...|++ |+.++++++   +.+.+ .++     +...  +  |..+.+ +.+ +.++ 
T Consensus       174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~l-----Ga~~--v--~~~~~~-~~~-i~~~-  239 (357)
T 2b5w_A          174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EEL-----DATY--V--DSRQTP-VED-VPDV-  239 (357)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHT-----TCEE--E--ETTTSC-GGG-HHHH-
T ss_pred             CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHc-----CCcc--c--CCCccC-HHH-HHHh-
Confidence            89999999 9999998 7766 567987 999998876   54432 222     4332  2  444322 333 3433 


Q ss_pred             hcCCCccEEEEcccc
Q 044688          104 TKGLPLNILINNAGI  118 (147)
Q Consensus       104 ~~~~~id~lv~~ag~  118 (147)
                        .+++|++|.++|.
T Consensus       240 --~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 --YEQMDFIYEATGF  252 (357)
T ss_dssp             --SCCEEEEEECSCC
T ss_pred             --CCCCCEEEECCCC
Confidence              2379999999884

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.28  E-value=0.001  Score=50.37  Aligned_cols=43  Identities=16%  Similarity=0.057  Sum_probs=37.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      .+.+++++|+|+ |.+|...++.+...|++|++++++++..+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            367899999996 8999999999999999999999987665543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.28  E-value=0.00068  Score=49.50  Aligned_cols=40  Identities=28%  Similarity=0.370  Sum_probs=34.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      ++ ++|+|++|++|...+..+...|++|+.+++++++.+.+
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~  187 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL  187 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            45 99999999999999998888999999999887765444

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.26  E-value=0.002  Score=47.48  Aligned_cols=77  Identities=18%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|.+++|+|+ |++|...++.+...  |++|+.+++++++.+.+ .++     +....   .|..+.   ...++++.. 
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~l-----Ga~~v---i~~~~~---~~~~~~~~~-  235 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LEL-----GADYV---SEMKDA---ESLINKLTD-  235 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHH-----TCSEE---ECHHHH---HHHHHHHHT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHh-----CCCEE---eccccc---hHHHHHhhc-
Confidence            6899999999 89999999888888  99999999876554433 223     33221   232220   122333332 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      ..++|++|.++|.
T Consensus       236 g~g~D~vid~~g~  248 (344)
T 2h6e_A          236 GLGASIAIDLVGT  248 (344)
T ss_dssp             TCCEEEEEESSCC
T ss_pred             CCCccEEEECCCC
Confidence            2369999999874

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.25  E-value=0.0003  Score=52.26  Aligned_cols=80  Identities=13%  Similarity=0.159  Sum_probs=53.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh-CCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.++++.|+|++|.+|..++..++..|.  +|++++.++++++-...++... ++..++.+ .   +|   ....++   
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d---~~~al~---   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SD---IKEALT---   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SC---HHHHHT---
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CC---HHHHhC---
Confidence            5567899999999999999999999884  7999999876655555555432 22222221 1   12   222222   


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                          ..|++|.+||...
T Consensus        76 ----dADvVvitaG~p~   88 (343)
T 3fi9_A           76 ----DAKYIVSSGGAPR   88 (343)
T ss_dssp             ----TEEEEEECCC---
T ss_pred             ----CCCEEEEccCCCC
Confidence                6899999999753

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=97.24  E-value=0.00044  Score=50.89  Aligned_cols=84  Identities=19%  Similarity=0.134  Sum_probs=55.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++.|++++|.|++.-+|+.+|+.|+..|++|+++.|+.....+...++...    ......+..++++++.+.+.    
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~----~~~~t~~~~t~~~~L~e~l~----  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLN----KHHVEDLGEYSEDLLKKCSL----  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCC----CCEEEEEEECCHHHHHHHHH----
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhh----cccccccccccHhHHHHHhc----
Confidence            3789999999999988999999999999999999988743322211111110    01111122234456666655    


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                         ..|+||..+|..
T Consensus       245 ---~ADIVIsAtg~p  256 (320)
T 1edz_A          245 ---DSDVVITGVPSE  256 (320)
T ss_dssp             ---HCSEEEECCCCT
T ss_pred             ---cCCEEEECCCCC
Confidence               479999988864

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.22  E-value=0.0013  Score=49.56  Aligned_cols=80  Identities=19%  Similarity=0.343  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -.|.+++|+|+ |++|...+..+...|+ +|+++++++++.+ +..++     +....   .|..+.+..+. +.++. .
T Consensus       212 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~~~~l-----Ga~~v---i~~~~~~~~~~-i~~~t-~  279 (404)
T 3ip1_A          212 RPGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRN-LAKEL-----GADHV---IDPTKENFVEA-VLDYT-N  279 (404)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHH-----TCSEE---ECTTTSCHHHH-HHHHT-T
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHc-----CCCEE---EcCCCCCHHHH-HHHHh-C
Confidence            35789999998 8999999888888999 8999888765443 22333     33322   24433332222 22221 1


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      ..++|++|.++|.
T Consensus       280 g~g~D~vid~~g~  292 (404)
T 3ip1_A          280 GLGAKLFLEATGV  292 (404)
T ss_dssp             TCCCSEEEECSSC
T ss_pred             CCCCCEEEECCCC
Confidence            2268999998874

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.21  E-value=0.00088  Score=49.95  Aligned_cols=79  Identities=15%  Similarity=0.107  Sum_probs=51.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC-HHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS-LASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~  105 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+. ++     +....   .|..+ .+++.+.+.++.. 
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l-----Ga~~v---i~~~~~~~~~~~~i~~~t~-  259 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATEC---LNPKDYDKPIYEVICEKTN-  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSEE---ECGGGCSSCHHHHHHHHTT-
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc-----CCcEE---EecccccchHHHHHHHHhC-
Confidence            5789999995 9999999888877898 8999988876554332 22     43322   23322 1223333333322 


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                       +++|++|.++|.
T Consensus       260 -gg~Dvvid~~g~  271 (373)
T 1p0f_A          260 -GGVDYAVECAGR  271 (373)
T ss_dssp             -SCBSEEEECSCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.19  E-value=0.00056  Score=49.48  Aligned_cols=44  Identities=14%  Similarity=0.286  Sum_probs=37.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDV   69 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~   69 (147)
                      ..+.+++++|+|+ ||.|++++..|.+.|+ +|+++.|+.++.+++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L  162 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI  162 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            4578999999997 6999999999999998 899999987654433

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.18  E-value=0.00055  Score=46.90  Aligned_cols=41  Identities=15%  Similarity=0.204  Sum_probs=35.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      +++|+|++|.+|.++++.|++.|++|++++|++++.+.+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~   42 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            57899999999999999999999999999998766555443

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.17  E-value=0.0057  Score=43.91  Aligned_cols=42  Identities=21%  Similarity=0.153  Sum_probs=35.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      +++.|.|+ |.+|..+|..|++.|++|++.+++++..+...+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56777775 7899999999999999999999998776655543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.17  E-value=0.0025  Score=46.14  Aligned_cols=81  Identities=12%  Similarity=0.103  Sum_probs=51.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+++.|.||.|.+|.+++..|.+.|++|++++|+++.  +..+.+.    ..++.++..-.   ..+..+++++.....+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~--~~~~~~~----~aDvVilavp~---~~~~~vl~~l~~~l~~   91 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA--VAESILA----NADVVIVSVPI---NLTLETIERLKPYLTE   91 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG--GHHHHHT----TCSEEEECSCG---GGHHHHHHHHGGGCCT
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc--CHHHHhc----CCCEEEEeCCH---HHHHHHHHHHHhhcCC
Confidence            3568899989999999999999999999999987653  1112121    34555544432   2355666666543332


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      =.+|++.+++
T Consensus        92 ~~iv~~~~sv  101 (298)
T 2pv7_A           92 NMLLADLTSV  101 (298)
T ss_dssp             TSEEEECCSC
T ss_pred             CcEEEECCCC
Confidence            2355555543

>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*

Probab=97.16  E-value=0.001  Score=51.01  Aligned_cols=64  Identities=19%  Similarity=0.281  Sum_probs=49.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus        38 L~~~~VlvvG~-GGlGs~va~~La~aGvg~i~ivD~D~Ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~lnp~v~v~~~~  116 (434)
T 1tt5_B           38 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  116 (434)
T ss_dssp             HHTCCEEEECS-STHHHHHHHHHHHTTCCCEEEEECCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEE
T ss_pred             hcCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEcCCEechhccCCCcCCChhHcCcHHHHHHHHHHHhhCCCCEEEEEe
Confidence            46789999997 7899999999999997 788886431                   34556677788877777777776


Q ss_pred             ecCCC
Q 044688           87 LDLSS   91 (147)
Q Consensus        87 ~D~~~   91 (147)
                      .++++
T Consensus       117 ~~i~~  121 (434)
T 1tt5_B          117 NKIQD  121 (434)
T ss_dssp             SCGGG
T ss_pred             cccch
Confidence            65543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.12  E-value=0.0036  Score=46.14  Aligned_cols=78  Identities=13%  Similarity=0.009  Sum_probs=53.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCC--CeeEEEEecCCCHHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPT--AKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+++.|+|+ |.+|.+++..|+..|.  +|++.++++++++-...++....|-  ..+.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            3567899996 9999999999999886  8999999877666655556543211  223322222   11          


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                       .+...|++|.++|...
T Consensus        70 -a~~~aDvVvi~ag~p~   85 (326)
T 3pqe_A           70 -DCKDADIVCICAGANQ   85 (326)
T ss_dssp             -GGTTCSEEEECCSCCC
T ss_pred             -HhCCCCEEEEecccCC
Confidence             1236899999999753

>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A

Probab=97.09  E-value=0.0011  Score=52.97  Aligned_cols=64  Identities=23%  Similarity=0.381  Sum_probs=50.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+.
T Consensus        15 L~~s~VlVVGa-GGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~iNP~v~V~a~~   93 (640)
T 1y8q_B           15 VAGGRVLVVGA-GGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQFYPKANIVAYH   93 (640)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTTCTTCEEEEEE
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHHCCCCeEEEEe
Confidence            56788999998 8899999999999997 888887642                   22344667777777788888888


Q ss_pred             ecCCC
Q 044688           87 LDLSS   91 (147)
Q Consensus        87 ~D~~~   91 (147)
                      .++++
T Consensus        94 ~~i~~   98 (640)
T 1y8q_B           94 DSIMN   98 (640)
T ss_dssp             SCTTS
T ss_pred             cccch
Confidence            77754

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=97.07  E-value=0.00017  Score=51.33  Aligned_cols=39  Identities=21%  Similarity=0.366  Sum_probs=33.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccch
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGT   67 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~   67 (147)
                      +.+ +++|.|+ ||.|++++..|++.|+ +|+++.|+.++.+
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~  146 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAK  146 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHH
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            567 8999987 8999999999999998 8999999865433

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.07  E-value=0.0046  Score=44.72  Aligned_cols=85  Identities=16%  Similarity=0.182  Sum_probs=59.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.       +.+...   ..++..-+.+...+..+++.+
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~---aDvvi~~vp~~~~~~~v~~~l   91 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA---ADLIHITVLDDAQVREVVGEL   91 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT---SSEEEECCSSHHHHHHHHHHH
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh---CCEEEEECCChHHHHHHHHHH
Confidence            4677777 58899999999999999999999998877665432       122211   233444455666788888877


Q ss_pred             HhcCCCccEEEEcccc
Q 044688          103 TTKGLPLNILINNAGI  118 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~  118 (147)
                      .....+-.++|++...
T Consensus        92 ~~~l~~g~ivv~~st~  107 (296)
T 3qha_A           92 AGHAKPGTVIAIHSTI  107 (296)
T ss_dssp             HTTCCTTCEEEECSCC
T ss_pred             HHhcCCCCEEEEeCCC
Confidence            7665555677777654

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.07  E-value=0.0047  Score=45.63  Aligned_cols=79  Identities=8%  Similarity=0.055  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ...+++.|+|+ |.+|..++..|+..|.  +|++.+++.++++-...++...  ++.. ...+..  .|.+         
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~-~~i~~~--~d~~---------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKT-PKIVSS--KDYS---------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSC-CEEEEC--SSGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCC-CeEEEc--CCHH---------
Confidence            45678999997 9999999999999886  8999999877666666666542  2111 111211  1221         


Q ss_pred             HhcCCCccEEEEccccCC
Q 044688          103 TTKGLPLNILINNAGIMA  120 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~  120 (147)
                        .+...|++|.+||...
T Consensus        84 --~~~~aDiVvi~aG~~~   99 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQ   99 (331)
T ss_dssp             --GGTTEEEEEECCSCCC
T ss_pred             --HhCCCCEEEEccCCCC
Confidence              1236999999999764

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=97.06  E-value=0.0021  Score=48.27  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=50.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.| +|++|...+..+...|+ +|+++++++++.+.+ .   +.  +..  .  .|.++.+.+.+.+.+.. ..
T Consensus       185 ~g~~VlV~G-aG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~---~l--Ga~--~--i~~~~~~~~~~~v~~~t-~g  252 (398)
T 1kol_A          185 PGSTVYVAG-AGPVGLAAAASARLLGAAVVIVGDLNPARLAHA-K---AQ--GFE--I--ADLSLDTPLHEQIAALL-GE  252 (398)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-H---HT--TCE--E--EETTSSSCHHHHHHHHH-SS
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-H---Hc--CCc--E--EccCCcchHHHHHHHHh-CC
Confidence            578999999 59999999888778898 788888876544332 2   22  443  2  34443332222233322 12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~G~  264 (398)
T 1kol_A          253 PEVDCAVDAVGF  264 (398)
T ss_dssp             SCEEEEEECCCT
T ss_pred             CCCCEEEECCCC
Confidence            369999999984

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.05  E-value=0.00089  Score=50.94  Aligned_cols=74  Identities=20%  Similarity=0.262  Sum_probs=52.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +..++|.|. |.+|..+++.|.+.|.+|++++++++..+.+.    ..  +  +.++.+|.++++.+.++      ....
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~--g--~~vi~GDat~~~~L~~a------gi~~   68 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KF--G--MKVFYGDATRMDLLESA------GAAK   68 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HT--T--CCCEESCTTCHHHHHHT------TTTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hC--C--CeEEEcCCCCHHHHHhc------CCCc
Confidence            345889997 77999999999999999999999876544433    22  2  34567788887765443      1225


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      .|.+|.+.+
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            677776654

>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*

Probab=97.04  E-value=0.0011  Score=49.33  Aligned_cols=63  Identities=22%  Similarity=0.272  Sum_probs=48.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc-------------------CccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN-------------------MAAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~-------------------~~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +.+.+++|.|+ ||+|..+++.|+..|. ++.+++.+                   ..+.+.+.+.+++.+|..++..+.
T Consensus        34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~  112 (346)
T 1y8q_A           34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT  112 (346)
T ss_dssp             HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence            67889999996 7999999999999997 88888532                   134566777888887777777766


Q ss_pred             ecCC
Q 044688           87 LDLS   90 (147)
Q Consensus        87 ~D~~   90 (147)
                      .+++
T Consensus       113 ~~~~  116 (346)
T 1y8q_A          113 EDIE  116 (346)
T ss_dssp             SCGG
T ss_pred             cccC
Confidence            6553

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=97.03  E-value=0.0014  Score=47.72  Aligned_cols=68  Identities=7%  Similarity=-0.007  Sum_probs=45.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+ |++|...+..+...|++|+.++ ++++.+.+ .++     +....+   |  |.   +    ++   ..
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~l-----Ga~~v~---~--d~---~----~v---~~  198 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKR-----GVRHLY---R--EP---S----QV---TQ  198 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHH-----TEEEEE---S--SG---G----GC---CS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHc-----CCCEEE---c--CH---H----Hh---CC
Confidence            6889999999 9999999888888899999999 66654433 333     443322   2  21   1    11   34


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+++.++|.
T Consensus       199 g~Dvv~d~~g~  209 (315)
T 3goh_A          199 KYFAIFDAVNS  209 (315)
T ss_dssp             CEEEEECC---
T ss_pred             CccEEEECCCc
Confidence            78999988874

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.02  E-value=0.0019  Score=48.11  Aligned_cols=78  Identities=12%  Similarity=0.095  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+ +++     +....   .|..+.+..++ +.+..  .
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~v---i~~~~~~~~~~-~~~~~--~  256 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQL-----GATHV---INSKTQDPVAA-IKEIT--D  256 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHH-----TCSEE---EETTTSCHHHH-HHHHT--T
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHc-----CCCEE---ecCCccCHHHH-HHHhc--C
Confidence            5789999995 8999999888777898 699998876554332 233     33322   23333322222 22222  2


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       257 gg~D~vid~~g~  268 (371)
T 1f8f_A          257 GGVNFALESTGS  268 (371)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEECCCC
Confidence            379999999874

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.01  E-value=0.0041  Score=46.78  Aligned_cols=43  Identities=14%  Similarity=0.071  Sum_probs=37.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      +.+++++|+|+ |.+|...++.+...|++|++++++++..+.+.
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  224 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR  224 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence            47789999999 79999999999999999999999977655543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.99  E-value=0.0022  Score=46.97  Aligned_cols=89  Identities=16%  Similarity=0.107  Sum_probs=56.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ...+++.|.|. |.+|..++..|++.|++|++++|++++.+.+.+.       +.+.....++.  ..-+.+...+..++
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvV--i~~vp~~~~~~~v~  105 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIV--VSMLENGAVVQDVL  105 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEE--EECCSSHHHHHHHH
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEE--EEECCCHHHHHHHH
Confidence            44567888866 8899999999999999999999987765544321       11111123333  33344555666666


Q ss_pred             H--HHHhcCCCccEEEEcccc
Q 044688          100 S--DFTTKGLPLNILINNAGI  118 (147)
Q Consensus       100 ~--~~~~~~~~id~lv~~ag~  118 (147)
                      .  .+.....+-.++|++...
T Consensus       106 ~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          106 FAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             TTTCHHHHCCTTCEEEECSCC
T ss_pred             cchhHHhhCCCCCEEEecCCC
Confidence            5  444444455677776653

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.97  E-value=0.00074  Score=49.98  Aligned_cols=78  Identities=13%  Similarity=0.078  Sum_probs=49.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--E-----EEEEEccC--ccchHHHHHHHhh-CCCCeeEEEEecCCCHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--H-----VFMAVRNM--AAGTDVKDAIVKE-IPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~-----v~~~~r~~--~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      .++.||||+|.+|..++..|+..+.  +     ++++++++  +..+-...++... .+-  ..  ...+++  ...+. 
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~--~~--~~~~~~--~~~~~-   76 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL--LK--DVIATD--KEEIA-   76 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTT--EE--EEEEES--CHHHH-
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcc--cC--CEEEcC--CcHHH-
Confidence            5799999999999999999998774  4     88999864  2344444555542 111  11  111111  11111 


Q ss_pred             HHHHhcCCCccEEEEccccCC
Q 044688          100 SDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~  120 (147)
                            +...|++|+.||...
T Consensus        77 ------~~daDvVvitAg~pr   91 (333)
T 5mdh_A           77 ------FKDLDVAILVGSMPR   91 (333)
T ss_dssp             ------TTTCSEEEECCSCCC
T ss_pred             ------hCCCCEEEEeCCCCC
Confidence                  236899999999753

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.89  E-value=0.0034  Score=46.29  Aligned_cols=80  Identities=13%  Similarity=0.215  Sum_probs=53.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ...++++.|+|+ |.+|..++..|+..|.  ++++.++++++++-...++....+ ...+.... +  +.          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH----------
Confidence            456678999996 9999999999999886  899999987766655556654321 01222221 1  11          


Q ss_pred             HhcCCCccEEEEccccCC
Q 044688          103 TTKGLPLNILINNAGIMA  120 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~  120 (147)
                       +.+...|++|++||...
T Consensus        72 -~a~~~aDiVvi~ag~~~   88 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQ   88 (326)
T ss_dssp             -GGGTTCSEEEECCCCC-
T ss_pred             -HHhcCCCEEEECCCCCC
Confidence             12336899999999753

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.87  E-value=0.0072  Score=45.84  Aligned_cols=43  Identities=21%  Similarity=0.110  Sum_probs=37.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      +.+.+++|+|+ |.+|...++.+...|++|+++++++...+.+.
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~  230 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA  230 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            46789999999 79999999999999999999999877655443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.86  E-value=0.0064  Score=44.79  Aligned_cols=78  Identities=17%  Similarity=0.103  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhC----CCCeeEEEEecCCCHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEI----PTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+....++....    ...++.. ..|   .+        
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~~--------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AND---YA--------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ESS---GG--------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eCC---HH--------
Confidence            34568899998 9999999999999988 99999999877654444444321    0122221 112   11        


Q ss_pred             HHhcCCCccEEEEccccCC
Q 044688          102 FTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~  120 (147)
                         .+...|++|.++|...
T Consensus        72 ---a~~~aDiVIiaag~p~   87 (324)
T 3gvi_A           72 ---AIEGADVVIVTAGVPR   87 (324)
T ss_dssp             ---GGTTCSEEEECCSCCC
T ss_pred             ---HHCCCCEEEEccCcCC
Confidence               1236899999999754

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.86  E-value=0.0021  Score=46.46  Aligned_cols=40  Identities=28%  Similarity=0.345  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ..+.||.++|.|.++-+|+.++..|...|+.|.++.+...
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~  195 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch
Confidence            4689999999999999999999999999999999987643

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.86  E-value=0.0065  Score=41.69  Aligned_cols=79  Identities=10%  Similarity=0.202  Sum_probs=49.6

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .+..+..+++.|.| .|.+|.+++..|++.|.+|++++|+++           .....++.++.+-   ...+..+++++
T Consensus        13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-----------~~~~aD~vi~av~---~~~~~~v~~~l   77 (209)
T 2raf_A           13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------ATTLGEIVIMAVP---YPALAALAKQY   77 (209)
T ss_dssp             -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-----------CSSCCSEEEECSC---HHHHHHHHHHT
T ss_pred             cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-----------HhccCCEEEEcCC---cHHHHHHHHHH
Confidence            34557778899999 689999999999999999999998865           1113455554443   45566777665


Q ss_pred             HhcCCCccEEEEccc
Q 044688          103 TTKGLPLNILINNAG  117 (147)
Q Consensus       103 ~~~~~~id~lv~~ag  117 (147)
                      ..... =.++++++.
T Consensus        78 ~~~~~-~~~vi~~~~   91 (209)
T 2raf_A           78 ATQLK-GKIVVDITN   91 (209)
T ss_dssp             HHHHT-TSEEEECCC
T ss_pred             HHhcC-CCEEEEECC
Confidence            44333 235665543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.83  E-value=0.0047  Score=44.95  Aligned_cols=87  Identities=13%  Similarity=0.038  Sum_probs=54.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHHH--
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKFA--   99 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~~--   99 (147)
                      .+++.|.|. |.+|..++..|++.|++|++.+|++++.+.+.+.       +.+.....++  +..-+.+...+..++  
T Consensus        21 m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~   97 (310)
T 3doj_A           21 MMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKY--TIAMLSDPCAALSVVFD   97 (310)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSE--EEECCSSHHHHHHHHHS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCE--EEEEcCCHHHHHHHHhC
Confidence            356778874 8899999999999999999999998776655431       0000001233  333344555666666  


Q ss_pred             -HHHHhcCCCccEEEEcccc
Q 044688          100 -SDFTTKGLPLNILINNAGI  118 (147)
Q Consensus       100 -~~~~~~~~~id~lv~~ag~  118 (147)
                       +.+.....+-.++|++...
T Consensus        98 ~~~l~~~l~~g~~vv~~st~  117 (310)
T 3doj_A           98 KGGVLEQICEGKGYIDMSTV  117 (310)
T ss_dssp             TTCGGGGCCTTCEEEECSCC
T ss_pred             chhhhhccCCCCEEEECCCC
Confidence             4444444444567776653

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.83  E-value=0.003  Score=47.53  Aligned_cols=79  Identities=16%  Similarity=0.194  Sum_probs=50.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.    +++.  +..  .  .|..+.+.+.+.+.+... .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a~~l--Ga~--~--i~~~~~~~~~~~~~~~~~-g  252 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL----LSDA--GFE--T--IDLRNSAPLRDQIDQILG-K  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH----HHTT--TCE--E--EETTSSSCHHHHHHHHHS-S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH----HHHc--CCc--E--EcCCCcchHHHHHHHHhC-C
Confidence            5789999996 9999998888777898 89999987654432    2222  443  2  344433221222222221 1


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       253 ~g~Dvvid~~g~  264 (398)
T 2dph_A          253 PEVDCGVDAVGF  264 (398)
T ss_dssp             SCEEEEEECSCT
T ss_pred             CCCCEEEECCCC
Confidence            269999999984

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.83  E-value=0.0038  Score=44.91  Aligned_cols=85  Identities=13%  Similarity=0.108  Sum_probs=55.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC---EEEEEEccCccchHHHHHH--------HhhCCCCeeEEEEecCCCHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV---HVFMAVRNMAAGTDVKDAI--------VKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~---~v~~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      .+++.|.|+ |.+|.+++..|++.|+   +|++++|++++.+.+.+..        .+.....++.++..   .+..+..
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~   78 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKM   78 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHH
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHH
Confidence            356778877 8899999999999998   8999999987766655421        11111234444433   3456677


Q ss_pred             HHHHHHhc-CCCccEEEEccc
Q 044688           98 FASDFTTK-GLPLNILINNAG  117 (147)
Q Consensus        98 ~~~~~~~~-~~~id~lv~~ag  117 (147)
                      +++++... ..+=.++|++++
T Consensus        79 vl~~l~~~~l~~~~iiiS~~a   99 (280)
T 3tri_A           79 VCEELKDILSETKILVISLAV   99 (280)
T ss_dssp             HHHHHHHHHHTTTCEEEECCT
T ss_pred             HHHHHHhhccCCCeEEEEecC
Confidence            77776543 322237777654

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=96.82  E-value=0.0012  Score=48.78  Aligned_cols=79  Identities=15%  Similarity=0.112  Sum_probs=49.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+ ...++     +....   .|..+.+..+++ .+.. ..
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~-~~~~l-----Ga~~v---i~~~~~~~~~~v-~~~t-~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCD-IALEY-----GATDI---INYKNGDIVEQI-LKAT-DG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHH-HHHHH-----TCCEE---ECGGGSCHHHHH-HHHT-TT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHH-HHHHh-----CCceE---EcCCCcCHHHHH-HHHc-CC
Confidence            5789999985 9999999888888898 7999988755433 33333     43322   233333222222 2221 11


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       234 ~g~D~v~d~~g~  245 (352)
T 3fpc_A          234 KGVDKVVIAGGD  245 (352)
T ss_dssp             CCEEEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence            269999998875

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.82  E-value=0.0096  Score=43.67  Aligned_cols=78  Identities=18%  Similarity=0.120  Sum_probs=50.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEcc--CccchHHHHHHHhhC----CCCeeEEEEecCCCHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRN--MAAGTDVKDAIVKEI----PTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~--~~~~~~~~~~l~~~~----~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ++.+++.|+|+ |.+|..++..|+..|. +|++.+++  ++..+-...++....    ...++..  .  ++.       
T Consensus         6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~-------   73 (315)
T 3tl2_A            6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDY-------   73 (315)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCG-------
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCH-------
Confidence            45678999996 9999999999999998 99999998  333333333332210    0122221  1  111       


Q ss_pred             HHHHhcCCCccEEEEccccCC
Q 044688          100 SDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~~  120 (147)
                          +.+...|++|.++|...
T Consensus        74 ----~a~~~aDvVIiaag~p~   90 (315)
T 3tl2_A           74 ----ADTADSDVVVITAGIAR   90 (315)
T ss_dssp             ----GGGTTCSEEEECCSCCC
T ss_pred             ----HHhCCCCEEEEeCCCCC
Confidence                12347999999999754

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.80  E-value=0.0057  Score=43.87  Aligned_cols=85  Identities=22%  Similarity=0.162  Sum_probs=52.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH------HHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA------IVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~------l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++.|.|++|.+|..+++.|.+.|++|++++|++++.+.+.+.      ..+.....++.++.  + ....+..+++++.
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~aDvVi~a--v-~~~~~~~v~~~l~   88 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMGIPLTDGDGWIDEADVVVLA--L-PDNIIEKVAEDIV   88 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTTCCCCCSSGGGGTCSEEEEC--S-CHHHHHHHHHHHG
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcCCCcCCHHHHhcCCCEEEEc--C-CchHHHHHHHHHH
Confidence            4799999999999999999999999999999986655544320      00000012222222  1 2344677777765


Q ss_pred             hcCCCccEEEEccc
Q 044688          104 TKGLPLNILINNAG  117 (147)
Q Consensus       104 ~~~~~id~lv~~ag  117 (147)
                      ....+=.++|+++.
T Consensus        89 ~~l~~~~ivv~~s~  102 (286)
T 3c24_A           89 PRVRPGTIVLILDA  102 (286)
T ss_dssp             GGSCTTCEEEESCS
T ss_pred             HhCCCCCEEEECCC
Confidence            54433345665543

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=96.78  E-value=0.0068  Score=46.47  Aligned_cols=79  Identities=19%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.+|.++|.|. |+.|.+.|+.|.++|++|.+.+++........+.+.+.  +.++.  ...-  ++.   .++    
T Consensus         5 ~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~--gi~~~--~g~~--~~~---~~~----   70 (451)
T 3lk7_A            5 TTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEE--GIKVV--CGSH--PLE---LLD----   70 (451)
T ss_dssp             CTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHT--TCEEE--ESCC--CGG---GGG----
T ss_pred             hhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhC--CCEEE--ECCC--hHH---hhc----
Confidence            4578999999999 78999999999999999999998754333444556554  43322  2211  111   111    


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                        +..|.||.+.|+.
T Consensus        71 --~~~d~vv~spgi~   83 (451)
T 3lk7_A           71 --EDFCYMIKNPGIP   83 (451)
T ss_dssp             --SCEEEEEECTTSC
T ss_pred             --CCCCEEEECCcCC
Confidence              1288999888874

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.77  E-value=0.012  Score=43.88  Aligned_cols=90  Identities=16%  Similarity=0.154  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH----------HHHhhCCCCeeEEEEecCCCHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD----------AIVKEIPTAKVDVLELDLSSLAS   94 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~----------~l~~~~~~~~~~~~~~D~~~~~~   94 (147)
                      .+++.+++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+          ++.+..+..++.++.  +.+. .
T Consensus        18 ~Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g~~~~~s~~e~~~~a~~~DvVi~~--vp~~-~   93 (358)
T 4e21_A           18 LYFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREGIAGARSIEEFCAKLVKPRVVWLM--VPAA-V   93 (358)
T ss_dssp             ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCBCCSSHHHHHHHSCSSCEEEEC--SCGG-G
T ss_pred             hhhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCCCEEeCCHHHHHhcCCCCCEEEEe--CCHH-H
Confidence            346677888888 5889999999999999999999998765544322          111110011333332  2233 5


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      +..+++.+.....+=++||++...
T Consensus        94 v~~vl~~l~~~l~~g~iiId~st~  117 (358)
T 4e21_A           94 VDSMLQRMTPLLAANDIVIDGGNS  117 (358)
T ss_dssp             HHHHHHHHGGGCCTTCEEEECSSC
T ss_pred             HHHHHHHHHhhCCCCCEEEeCCCC
Confidence            667777776655555677776654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.76  E-value=0.002  Score=48.20  Aligned_cols=46  Identities=20%  Similarity=0.242  Sum_probs=39.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      ++.||+++|.|. |.+|..+|+.|.+.|++|++.+++.++++++.++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~  215 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE  215 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            689999999997 7899999999999999999998887665555544

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.76  E-value=0.0037  Score=44.93  Aligned_cols=40  Identities=15%  Similarity=0.049  Sum_probs=36.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      +.||.++|.|.++-+|+.++..|...|+.|+++.+....+
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L  187 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDI  187 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCH
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccH
Confidence            8999999999999999999999999999999998764433

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=96.75  E-value=0.0052  Score=45.22  Aligned_cols=78  Identities=18%  Similarity=0.228  Sum_probs=48.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+... |++|+.+++++++.+.+ .++     +....+   |-.+ +..++ +.+... .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~l-----Ga~~~i---~~~~-~~~~~-v~~~t~-g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REV-----GADAAV---KSGA-GAADA-IRELTG-G  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHT-----TCSEEE---ECST-THHHH-HHHHHG-G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHc-----CCCEEE---cCCC-cHHHH-HHHHhC-C
Confidence            5789999997 99999888777666 68999999886554422 222     443322   2222 22222 222221 1


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus       238 ~g~d~v~d~~G~  249 (345)
T 3jv7_A          238 QGATAVFDFVGA  249 (345)
T ss_dssp             GCEEEEEESSCC
T ss_pred             CCCeEEEECCCC
Confidence            269999999884

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.73  E-value=0.018  Score=42.78  Aligned_cols=91  Identities=15%  Similarity=0.063  Sum_probs=53.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-------EEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-------HVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-------~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      .+..-++.|+|++|+||..++..|++...       .+.+.+.++.  .++-..-++..............+  +.   .
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---~   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---R   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---H
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---H
Confidence            45567899999999999999999987532       6888887643  223333445432111122222211  21   1


Q ss_pred             HHHHHHHhcCCCccEEEEccccCCCCCCCCHHH
Q 044688           97 KFASDFTTKGLPLNILINNAGIMASPFMLSKDN  129 (147)
Q Consensus        97 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~  129 (147)
                      ..       +...|++|..||....+ .++.++
T Consensus        96 ~a-------~~~advVvi~aG~prkp-GmtR~D  120 (345)
T 4h7p_A           96 VA-------FDGVAIAIMCGAFPRKA-GMERKD  120 (345)
T ss_dssp             HH-------TTTCSEEEECCCCCCCT-TCCHHH
T ss_pred             HH-------hCCCCEEEECCCCCCCC-CCCHHH
Confidence            11       33799999999986432 344443

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=96.73  E-value=0.0019  Score=47.63  Aligned_cols=76  Identities=17%  Similarity=0.143  Sum_probs=50.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhh---CC-CCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKE---IP-TAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++.|+|+ |.+|.+++..|+..|. +|++.+++++.++.....+...   .+ ..++.+ .   +|.+   ..++    
T Consensus        10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~~----   77 (331)
T 1pzg_A           10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AALT----   77 (331)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHHT----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHhC----
Confidence            57889998 9999999999999997 9999999987766544333321   10 122221 1   2322   1222    


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                         ..|++|.++|...
T Consensus        78 ---~aDiVi~a~g~p~   90 (331)
T 1pzg_A           78 ---GADCVIVTAGLTK   90 (331)
T ss_dssp             ---TCSEEEECCSCSS
T ss_pred             ---CCCEEEEccCCCC
Confidence               6899999998754

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.71  E-value=0.0063  Score=43.66  Aligned_cols=86  Identities=10%  Similarity=0.019  Sum_probs=55.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHHH---
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKFA---   99 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~~---   99 (147)
                      +++.|.|. |.+|..++..|++.|++|++++|++++.+.+.+.       +.+.....++  +..-+.+...+..++   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPV--TFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSE--EEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCE--EEEEcCCHHHHHHHHcCc
Confidence            45778875 8999999999999999999999998876655431       1110001233  333444556677776   


Q ss_pred             HHHHhcCCCccEEEEcccc
Q 044688          100 SDFTTKGLPLNILINNAGI  118 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~  118 (147)
                      +.+.....+-.++|++.+.
T Consensus        79 ~~l~~~l~~~~~vi~~st~   97 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMSTV   97 (287)
T ss_dssp             TCHHHHCCTTCEEEECSCC
T ss_pred             chHhhcCCCCCEEEeCCCC
Confidence            5555444444567777553

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.69  E-value=0.0017  Score=47.54  Aligned_cols=39  Identities=31%  Similarity=0.483  Sum_probs=34.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~  191 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL  191 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            799999999999999998888899999999987665443

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.67  E-value=0.0022  Score=47.14  Aligned_cols=72  Identities=15%  Similarity=0.098  Sum_probs=50.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .+.++|.|. |.+|..+++.|.++|. |++++++++..+ +.    .    ..+.++.+|.+|++.+.++      ....
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~----~----~~~~~i~gd~~~~~~L~~a------~i~~  177 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VL----R----SGANFVHGDPTRVSDLEKA------NVRG  177 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HH----H----TTCEEEESCTTSHHHHHHT------CSTT
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HH----h----CCcEEEEeCCCCHHHHHhc------Chhh
Confidence            457999997 8899999999999999 999998876554 22    2    2356778888888766543      1124


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      .|.+|...+
T Consensus       178 a~~vi~~~~  186 (336)
T 1lnq_A          178 ARAVIVDLE  186 (336)
T ss_dssp             EEEEEECCS
T ss_pred             ccEEEEcCC
Confidence            566665543

>2nvu_B Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: c.111.1.2 c.94.1.1

Probab=96.62  E-value=0.0065  Score=49.84  Aligned_cols=63  Identities=19%  Similarity=0.292  Sum_probs=49.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEEe
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLEL   87 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~~   87 (147)
                      .+.+|+|.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+++.+|..++..+..
T Consensus       410 ~~~~vlvvG~-GglG~~~~~~L~~~Gvg~i~l~D~d~v~~snl~rq~~~~~~~vg~~Ka~~~~~~l~~~np~~~v~~~~~  488 (805)
T 2nvu_B          410 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN  488 (805)
T ss_dssp             HTCCEEEECC-SSHHHHHHHHHHTTTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCEEEEEES
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCeecccccccccccchhhcCChHHHHHHHHHHHHCCCCEEEEEec
Confidence            6788999987 6899999999999997 898987742                   234456677788888888887776


Q ss_pred             cCCC
Q 044688           88 DLSS   91 (147)
Q Consensus        88 D~~~   91 (147)
                      ++++
T Consensus       489 ~~~~  492 (805)
T 2nvu_B          489 KIQD  492 (805)
T ss_dssp             CGGG
T ss_pred             cccc
Confidence            6654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.62  E-value=0.0051  Score=44.45  Aligned_cols=40  Identities=33%  Similarity=0.377  Sum_probs=36.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.||.++|.|.++-+|+.++..|...|+.|.++.+...
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~  196 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR  196 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc
Confidence            4689999999999999999999999999999999987543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.61  E-value=0.0024  Score=49.26  Aligned_cols=74  Identities=12%  Similarity=0.171  Sum_probs=54.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      .+++|.|+ |.+|..+|+.|.++|++|++++++++..+++.+.+       .+..+.+|.++++.+.++      .....
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A------gi~~a   69 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA------GAQDA   69 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH------TTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc------CCCcC
Confidence            35777777 68999999999999999999999876655544432       466788999999877654      11257


Q ss_pred             cEEEEccc
Q 044688          110 NILINNAG  117 (147)
Q Consensus       110 d~lv~~ag  117 (147)
                      |.+|...+
T Consensus        70 d~~ia~t~   77 (461)
T 4g65_A           70 DMLVAVTN   77 (461)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEcC
Confidence            78776544

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.58  E-value=0.017  Score=42.41  Aligned_cols=79  Identities=11%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCC--CCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIP--TAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+++.|+| +|.+|.+++..|+..|. +|++.++++++.+....++....+  +........  ++.+           
T Consensus         4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~-----------   69 (321)
T 3p7m_A            4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK-----------   69 (321)
T ss_dssp             CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG-----------
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH-----------
Confidence            346788889 59999999999999887 999999998776555555543210  111111111  1221           


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                      .+...|++|+++|...
T Consensus        70 a~~~aDvVIi~ag~p~   85 (321)
T 3p7m_A           70 DLENSDVVIVTAGVPR   85 (321)
T ss_dssp             GGTTCSEEEECCSCCC
T ss_pred             HHCCCCEEEEcCCcCC
Confidence            1236899999999754

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=96.58  E-value=0.034  Score=40.10  Aligned_cols=39  Identities=21%  Similarity=0.180  Sum_probs=33.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      +++.|.|+ |.+|..+|..|++.|++|+++++++++.+..
T Consensus        16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~   54 (302)
T 1f0y_A           16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS   54 (302)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence            56888888 8899999999999999999999987765543

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=96.57  E-value=0.0025  Score=46.77  Aligned_cols=86  Identities=15%  Similarity=0.094  Sum_probs=55.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch--------HHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT--------DVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~--------~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      .++.|+++.|.|. |.||.++|+.|...|++|+..+|+++..+        .-.+++.+   .+++..+.+-++..  ..
T Consensus       135 ~~l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~~~~~l~ell~---~aDiV~l~~Plt~~--t~  208 (315)
T 3pp8_A          135 YTREEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPGVESYVGREELRAFLN---QTRVLINLLPNTAQ--TV  208 (315)
T ss_dssp             CCSTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTTCEEEESHHHHHHHHH---TCSEEEECCCCCGG--GT
T ss_pred             CCcCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhhhhhhcccCCHHHHHh---hCCEEEEecCCchh--hh
Confidence            4689999999998 78999999999999999999998765321        11222322   45777777766532  22


Q ss_pred             HHH-HHHHhcCCCccEEEEcc
Q 044688           97 KFA-SDFTTKGLPLNILINNA  116 (147)
Q Consensus        97 ~~~-~~~~~~~~~id~lv~~a  116 (147)
                      .++ ++......+=-++||.+
T Consensus       209 ~li~~~~l~~mk~gailIN~a  229 (315)
T 3pp8_A          209 GIINSELLDQLPDGAYVLNLA  229 (315)
T ss_dssp             TCBSHHHHTTSCTTEEEEECS
T ss_pred             hhccHHHHhhCCCCCEEEECC
Confidence            223 23333333334555554

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.57  E-value=0.012  Score=41.56  Aligned_cols=86  Identities=13%  Similarity=0.230  Sum_probs=54.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHH--------hhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIV--------KEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~--------~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      +.++.|.|+ |.+|..++..|.+.|++ |.+++|++++.+.+.+.+.        +.....++.+  .- .....+..++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi--~a-v~~~~~~~v~   85 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYI--VS-LKDSAFAELL   85 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEE--EC-CCHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEE--Ee-cCHHHHHHHH
Confidence            346888886 89999999999999998 8889998776665544321        1111122222  11 2334567777


Q ss_pred             HHHHhcCCCccEEEEcccc
Q 044688          100 SDFTTKGLPLNILINNAGI  118 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~  118 (147)
                      +++.....+=.++|++++.
T Consensus        86 ~~l~~~~~~~~ivv~~s~~  104 (266)
T 3d1l_A           86 QGIVEGKREEALMVHTAGS  104 (266)
T ss_dssp             HHHHTTCCTTCEEEECCTT
T ss_pred             HHHHhhcCCCcEEEECCCC
Confidence            7776544344577777654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=96.55  E-value=0.0039  Score=45.22  Aligned_cols=41  Identities=24%  Similarity=0.257  Sum_probs=36.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      ..+.+++++|.|+ |.+|+++++.|...|++|++.+|+.++.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~  193 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHL  193 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            4689999999996 8999999999999999999999986543

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.52  E-value=0.007  Score=43.80  Aligned_cols=41  Identities=34%  Similarity=0.414  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .++.|+.++|.|.+.-+|+.++..|+..|++|.++.+....
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~  195 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKN  195 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSC
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchh
Confidence            46899999999999999999999999999999999876543

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.51  E-value=0.0063  Score=43.96  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=35.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++.||.++|.|.++-+|+.++..|...|+.|.++.+..
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  195 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT  195 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999987653

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.51  E-value=0.0061  Score=44.37  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=36.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.||.++|.|.++-+|+.++..|...|+.|.++.+...
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~  200 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS  200 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC
Confidence            4689999999999999999999999999999999987433

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.45  E-value=0.0045  Score=44.72  Aligned_cols=40  Identities=23%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      ..+.|++++|.|. |.+|+++++.+...|++|++++|+.++
T Consensus       151 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~  190 (293)
T 3d4o_A          151 FTIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDL  190 (293)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            3688999999995 899999999999999999999998654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.43  E-value=0.023  Score=40.15  Aligned_cols=77  Identities=13%  Similarity=0.168  Sum_probs=54.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++.|.|++|.+|+.+++.+.+. +..++.+......++++..    .  ..+   +..|++.++.....+....+.  ++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~--~~D---vvIDfT~p~a~~~~~~~a~~~--g~   70 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----G--NTE---VVIDFTHPDVVMGNLEFLIDN--GI   70 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----T--TCC---EEEECSCTTTHHHHHHHHHHT--TC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----c--CCc---EEEEccChHHHHHHHHHHHHc--CC
Confidence            5889999999999999999865 8887765443333333221    1  233   467999998888887776665  68


Q ss_pred             cEEEEcccc
Q 044688          110 NILINNAGI  118 (147)
Q Consensus       110 d~lv~~ag~  118 (147)
                      ++|+-..|+
T Consensus        71 ~~VigTTG~   79 (245)
T 1p9l_A           71 HAVVGTTGF   79 (245)
T ss_dssp             EEEECCCCC
T ss_pred             CEEEcCCCC
Confidence            888877774

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.42  E-value=0.0021  Score=46.06  Aligned_cols=41  Identities=22%  Similarity=0.316  Sum_probs=35.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .+.+++++|.|+ |++|++++..|.+.|++|++++|+.++.+
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~  166 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAI  166 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHH
Confidence            467899999996 79999999999999999999999865443

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.40  E-value=0.0035  Score=44.50  Aligned_cols=46  Identities=24%  Similarity=0.353  Sum_probs=37.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      ++.+ +++|.|+ |++|+++++.|.+.|++|++++|+.++.+++.+.+
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~  159 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF  159 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh
Confidence            5778 8999997 77999999999999999999999876655555443

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.39  E-value=0.017  Score=42.26  Aligned_cols=42  Identities=12%  Similarity=0.145  Sum_probs=34.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDV   69 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~   69 (147)
                      +..+++.|.| .|.+|..+++.|.+.|+  +|++++|+++..+.+
T Consensus        31 ~~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a   74 (314)
T 3ggo_A           31 LSMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA   74 (314)
T ss_dssp             CSCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH
T ss_pred             cCCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH
Confidence            3447889998 69999999999999998  999999987655443

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.38  E-value=0.0053  Score=50.44  Aligned_cols=78  Identities=15%  Similarity=0.227  Sum_probs=49.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++||.|++|++|...+......|++|+.+..+. +.+.+.  +     +....   .|-.+.+..+.+ .+. ....
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l~--l-----ga~~v---~~~~~~~~~~~i-~~~-t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAVE--L-----SREHL---ASSRTCDFEQQF-LGA-TGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGSC--S-----CGGGE---ECSSSSTHHHHH-HHH-SCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhhh--c-----Chhhe---eecCChhHHHHH-HHH-cCCC
Confidence            578999999999999999988888899999988654 222111  1     33222   233333323322 222 1123


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+++++.|.
T Consensus       412 GvDvVld~~gg  422 (795)
T 3slk_A          412 GVDVVLNSLAG  422 (795)
T ss_dssp             CCSEEEECCCT
T ss_pred             CeEEEEECCCc
Confidence            69999998763

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=96.34  E-value=0.0083  Score=43.03  Aligned_cols=85  Identities=15%  Similarity=0.017  Sum_probs=53.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH-------HHhhCCCCeeEEEEecCCCHHHHHHHH---H
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA-------IVKEIPTAKVDVLELDLSSLASVRKFA---S  100 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~-------l~~~~~~~~~~~~~~D~~~~~~~~~~~---~  100 (147)
                      ++.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.       ..+.....+  ++..-+.+...+..++   +
T Consensus         3 ~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~ad--vvi~~v~~~~~~~~v~~~~~   79 (287)
T 3pdu_A            3 TYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACD--ITIAMLADPAAAREVCFGAN   79 (287)
T ss_dssp             CEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCS--EEEECCSSHHHHHHHHHSTT
T ss_pred             eEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCC--EEEEEcCCHHHHHHHHcCch
Confidence            466666 68999999999999999999999998876665432       000000122  2333344555666666   4


Q ss_pred             HHHhcCCCccEEEEcccc
Q 044688          101 DFTTKGLPLNILINNAGI  118 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~  118 (147)
                      .+.....+-.++|++...
T Consensus        80 ~l~~~l~~g~~vv~~st~   97 (287)
T 3pdu_A           80 GVLEGIGGGRGYIDMSTV   97 (287)
T ss_dssp             CGGGTCCTTCEEEECSCC
T ss_pred             hhhhcccCCCEEEECCCC
Confidence            444444444567766553

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.34  E-value=0.019  Score=41.62  Aligned_cols=74  Identities=12%  Similarity=0.037  Sum_probs=48.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh---CC-CCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE---IP-TAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~---~~-~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+++++.++-...++...   ++ ..++..  .  +|.+.          
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~--t--~d~~a----------   66 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVG--G--ADYSL----------   66 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEE--E--SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEE--e--CCHHH----------
Confidence            4788999 9999999999999887  8999999877654333333321   11 112221  1  12221          


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                       +...|++|.++|...
T Consensus        67 -~~~aDiVViaag~~~   81 (294)
T 1oju_A           67 -LKGSEIIVVTAGLAR   81 (294)
T ss_dssp             -GTTCSEEEECCCCCC
T ss_pred             -hCCCCEEEECCCCCC
Confidence             126899999999754

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.30  E-value=0.021  Score=42.65  Aligned_cols=65  Identities=11%  Similarity=0.099  Sum_probs=47.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+.+++++|.|+ |.+|+.+++.+.+.|++|++++.++.....      ..   .+ .++..|..|.+.+.++++
T Consensus         8 ~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~------~~---ad-~~~~~~~~d~~~l~~~~~   72 (377)
T 3orq_A            8 KLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR------YV---AH-EFIQAKYDDEKALNQLGQ   72 (377)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG------GG---SS-EEEECCTTCHHHHHHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh------hh---CC-EEEECCCCCHHHHHHHHH
Confidence            4567899999987 579999999999999999999876542110      00   11 244578888888877765

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=96.29  E-value=0.01  Score=43.24  Aligned_cols=40  Identities=25%  Similarity=0.296  Sum_probs=36.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.|+.++|.|++.-+|+.++..|...|++|.++.+...
T Consensus       161 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  200 (301)
T 1a4i_A          161 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA  200 (301)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcc
Confidence            4689999999999999999999999999999999986543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.26  E-value=0.03  Score=41.49  Aligned_cols=85  Identities=18%  Similarity=0.155  Sum_probs=51.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc------hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG------TDVKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~------~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .++.|+++.|.|. |.||.++|+.+...|++|+..+|+++..      .++. ++.+   .+++..+.+-.+..  ...+
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~~sl~-ell~---~aDvVil~vP~t~~--t~~l  239 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSGVDWIAHQSPV-DLAR---DSDVLAVCVAASAA--TQNI  239 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTTSCCEECSSHH-HHHH---TCSEEEECC-----------
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccccCceecCCHH-HHHh---cCCEEEEeCCCCHH--HHHH
Confidence            5799999999998 7899999999999999999999876431      1222 2222   35666666655432  2333


Q ss_pred             H-HHHHhcCCCccEEEEcc
Q 044688           99 A-SDFTTKGLPLNILINNA  116 (147)
Q Consensus        99 ~-~~~~~~~~~id~lv~~a  116 (147)
                      + ++......+=-++||.+
T Consensus       240 i~~~~l~~mk~gailIN~a  258 (340)
T 4dgs_A          240 VDASLLQALGPEGIVVNVA  258 (340)
T ss_dssp             -CHHHHHHTTTTCEEEECS
T ss_pred             hhHHHHhcCCCCCEEEECC
Confidence            3 23333343445666665

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.25  E-value=0.034  Score=39.44  Aligned_cols=82  Identities=20%  Similarity=0.139  Sum_probs=50.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH---------HHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA---------IVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~---------l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ++.|.| .|.+|.+++..|.+.|++|++++|++++.+.+.+.         +... ...++.++.   .....+..++++
T Consensus         2 ~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~D~vi~a---v~~~~~~~~~~~   76 (279)
T 2f1k_A            2 KIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLL-QTAKIIFLC---TPIQLILPTLEK   76 (279)
T ss_dssp             EEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGG-TTCSEEEEC---SCHHHHHHHHHH
T ss_pred             EEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHh-CCCCEEEEE---CCHHHHHHHHHH
Confidence            477888 68999999999999999999999987655443210         0000 112222221   224456677777


Q ss_pred             HHhcCCCccEEEEccc
Q 044688          102 FTTKGLPLNILINNAG  117 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag  117 (147)
                      +.....+=.++++.++
T Consensus        77 l~~~~~~~~~vv~~~~   92 (279)
T 2f1k_A           77 LIPHLSPTAIVTDVAS   92 (279)
T ss_dssp             HGGGSCTTCEEEECCS
T ss_pred             HHhhCCCCCEEEECCC
Confidence            6554433345666544

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=96.23  E-value=0.038  Score=40.79  Aligned_cols=77  Identities=14%  Similarity=0.088  Sum_probs=52.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh--CC-CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE--IP-TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~-~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+++.|+|+ |.+|..++..++..|.  +|++.+.++++.+-...++...  ++ ..++.. ..|..            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-t~d~~------------   85 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVS-GKDYS------------   85 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEE-ESSSC------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEE-cCCHH------------
Confidence            3467889998 9999999999999986  8999999876665555555432  11 112211 22221            


Q ss_pred             HhcCCCccEEEEccccCC
Q 044688          103 TTKGLPLNILINNAGIMA  120 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~  120 (147)
                        .+...|++|.+||...
T Consensus        86 --~~~daDiVIitaG~p~  101 (330)
T 3ldh_A           86 --VSAGSKLVVITAGARQ  101 (330)
T ss_dssp             --SCSSCSEEEECCSCCC
T ss_pred             --HhCCCCEEEEeCCCCC
Confidence              1336899999999764

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.22  E-value=0.021  Score=39.84  Aligned_cols=38  Identities=16%  Similarity=0.339  Sum_probs=34.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .+++++.+||.|+ |.+|...++.|++.|++|++++.+.
T Consensus        27 l~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~   64 (223)
T 3dfz_A           27 LDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTV   64 (223)
T ss_dssp             ECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4799999999998 5799999999999999999988753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=96.22  E-value=0.012  Score=53.95  Aligned_cols=81  Identities=14%  Similarity=0.242  Sum_probs=51.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc--
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK--  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--  105 (147)
                      .|.++||.|++|++|...+......|++|+++..+.++.+.+.+.+...  +....   .|-.+.+..    +.+.+.  
T Consensus      1667 ~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~l--ga~~v---~~~~~~~~~----~~i~~~t~ 1737 (2512)
T 2vz8_A         1667 PGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQL--DETCF---ANSRDTSFE----QHVLRHTA 1737 (2512)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTC--CSTTE---EESSSSHHH----HHHHHTTT
T ss_pred             CCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCC--CceEE---ecCCCHHHH----HHHHHhcC
Confidence            6789999999999999999888888999999987755444333221011  22221   233343322    223222  


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                      ..++|+++++.+
T Consensus      1738 g~GvDvVld~~g 1749 (2512)
T 2vz8_A         1738 GKGVDLVLNSLA 1749 (2512)
T ss_dssp             SCCEEEEEECCC
T ss_pred             CCCceEEEECCC
Confidence            236999999875

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.20  E-value=0.0056  Score=43.93  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=38.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   73 (147)
                      .+++++|.|+ ||.|++++..|.+.|+ +|+++.|+.++.+++.+.+
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~  163 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY  163 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence            4678999996 7899999999999997 7999999977777666555

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=96.20  E-value=0.021  Score=42.10  Aligned_cols=76  Identities=14%  Similarity=0.200  Sum_probs=46.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|++|++|...+..+...| .+|+.+... ++.+.    ++ .  +....   .| .+.+ +.+.+.+.  ..
T Consensus       142 ~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~~~-~~~~~----~~-~--ga~~~---~~-~~~~-~~~~~~~~--~~  206 (349)
T 4a27_A          142 EGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAST-FKHEA----IK-D--SVTHL---FD-RNAD-YVQEVKRI--SA  206 (349)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEECG-GGHHH----HG-G--GSSEE---EE-TTSC-HHHHHHHH--CT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeCCH-HHHHH----HH-c--CCcEE---Ec-CCcc-HHHHHHHh--cC
Confidence            57899999999999998887666664 688887633 32221    12 2  33322   23 3332 22223333  23


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus       207 ~g~Dvv~d~~g~  218 (349)
T 4a27_A          207 EGVDIVLDCLCG  218 (349)
T ss_dssp             TCEEEEEEECC-
T ss_pred             CCceEEEECCCc
Confidence            479999999874

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.19  E-value=0.012  Score=43.07  Aligned_cols=80  Identities=15%  Similarity=0.157  Sum_probs=47.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..|.+++|.|+ |++|...+..+...|+. ++.+++++++.+ +.+++     +....+   |..+.+ ..+...++ ..
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~-~a~~l-----Ga~~~i---~~~~~~-~~~~~~~~-~~  226 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLA-LAKSF-----GAMQTF---NSSEMS-APQMQSVL-RE  226 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHT-----TCSEEE---ETTTSC-HHHHHHHH-GG
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHH-HHHHc-----CCeEEE---eCCCCC-HHHHHHhh-cc
Confidence            46889999987 89999998888888985 566777655432 22222     443322   333322 22223332 22


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      ....|+++.++|.
T Consensus       227 ~~g~d~v~d~~G~  239 (346)
T 4a2c_A          227 LRFNQLILETAGV  239 (346)
T ss_dssp             GCSSEEEEECSCS
T ss_pred             cCCcccccccccc
Confidence            3467888888763

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.16  E-value=0.012  Score=43.73  Aligned_cols=40  Identities=25%  Similarity=0.197  Sum_probs=35.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ..++.|+++.|.|. |.||..+|+.|...|++|+..+|++.
T Consensus       159 ~~~l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~  198 (351)
T 3jtm_A          159 AYDLEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQM  198 (351)
T ss_dssp             CCCSTTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCC
T ss_pred             cccccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCcc
Confidence            35799999999997 67999999999999999999998753

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=96.09  E-value=0.05  Score=39.62  Aligned_cols=75  Identities=12%  Similarity=0.092  Sum_probs=49.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhh----CCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKE----IPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++.|+|+ |.+|..++..|+..|. +|++.++++++++....++...    ....++...    +|.+.          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----NNYAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----SCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----CCHHH----------
Confidence            47889998 9999999999999996 8999999877665544444431    101222211    12211          


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                       +...|++|.++|...
T Consensus        68 -~~~aD~Vi~a~g~p~   82 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPR   82 (309)
T ss_dssp             -GTTCSEEEECCCC--
T ss_pred             -HCCCCEEEEcCCCCC
Confidence             226899999998753

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	7e-20
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	9e-19
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-18
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-18
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-18
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-17
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	3e-17
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	3e-17
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-17
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	4e-17
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-17
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	9e-17
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-16
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-16
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-16
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-16
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-16
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	1e-15
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-15
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-15
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-15
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	3e-15
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-15
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	4e-15
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-14
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-14
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-14
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	5e-14
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-13
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-13
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	3e-13
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	4e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	4e-13
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	5e-13
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-13
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	6e-13
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-12
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-12
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	4e-12
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-12
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-12
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-12
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	9e-12
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-11
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	8e-11
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-10
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-10
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-10
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	5e-10
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-09
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-09
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-08
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-08
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	4e-08
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	4e-08
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	5e-08
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	2e-07
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	4e-07
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	7e-07
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	8e-07
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	9e-07
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	1e-06
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-06
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-06
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-06
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	9e-06
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	4e-05
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	9e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	9e-05
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	2e-04
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	4e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	0.001
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	0.001
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.001
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	0.001
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.002

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 7e-20
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           G  A+VTGA+ GIG      L L+G  V +   N+ AG   K A+ ++    K   ++ D
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML 147
           ++    +R            L+IL+NNAG+       ++ N E     N +  +    L
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVN------NEKNWEKTLQINLVSVISGTYL 115

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.7 bits (191), Expect = 9e-19
 Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 2/115 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGAS GIGA   R L  +G+ V    R +    ++            +     DLS
Sbjct: 12  LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLH 143
           +   +    S   ++   ++I INNAG+    +    S    +  F  N L    
Sbjct: 72  NEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSI 126

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 77.4 bits (190), Expect = 1e-18
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 5/129 (3%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAK 81
           +Q       T +VTG + GIG       A  G  +    RN     +      K+    +
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQ 58

Query: 82  VDVLELDLSSLASVRKFASDFTTK-GLPLNILINNAGIM-ASPFM-LSKDNIELQFATNH 138
           V     D S      K     ++  G  L+ILINN G + + P +  + ++     +TN 
Sbjct: 59  VTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNL 118

Query: 139 LGSLHLHML 147
             + HL  L
Sbjct: 119 ESAYHLSQL 127

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 76.1 bits (187), Expect = 3e-18
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 7/126 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
               AI+TG+S+GIG  T  + A  G  V +  R+     + +  I+   +    V+ + 
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVV 63

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIM------ASPFMLSKDNIELQFATNHLG 140
            D+++ A   +  S    K   L+IL+NNAG         +    S ++ +     N   
Sbjct: 64  ADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRS 123

Query: 141 SLHLHM 146
            + L  
Sbjct: 124 VIALTK 129

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 75.8 bits (186), Expect = 4e-18
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D  G  A+VTG S G+G    + LA  G  V +A RN+   ++    + ++    +    
Sbjct: 2   DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYG-VETMAF 60

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
             D+S+   V+K       K   L+ ++N AGI 
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN 94

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 74.8 bits (183), Expect = 1e-17
 Identities = 25/92 (27%), Positives = 41/92 (44%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           T    ++TG  SG+G  T   LA  G  + +   +       K A+++  P A+V     
Sbjct: 3   TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVA 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D+S  A V  + +  T +   ++   NNAGI 
Sbjct: 63  DVSDEAQVEAYVTATTERFGRIDGFFNNAGIE 94

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 73.5 bits (180), Expect = 3e-17
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 5/125 (4%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           +  G TA+VTG S GIG      LA  G  V+   RN     D       +    +  V 
Sbjct: 5   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV- 63

Query: 86  ELDLSSLASVRKFASDFTTK-GLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSL 142
             DLSS +  ++  +         LNIL+NNAGI+        + ++  L  + N   + 
Sbjct: 64  -CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 143 HLHML 147
           HL +L
Sbjct: 123 HLSVL 127

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 3e-17
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 5/124 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT---AKVDV 84
            G  AIVTG ++GIG    + L   G +V +A R +       D +   +P    A+V  
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIP 70

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSL 142
           ++ ++ +   V             +N L+NN G   ++    +S         TN  G+ 
Sbjct: 71  IQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTF 130

Query: 143 HLHM 146
           ++  
Sbjct: 131 YMCK 134

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.4 bits (179), Expect = 4e-17
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 32  AIVTGASSGIGAETTRVLA-LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           A+VTG + GIG    R L  L    V +  R++  G      +  E         +LD+ 
Sbjct: 6   ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDID 63

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHL 144
            L S+R        +   L++L+NNAGI    +         E+   TN  G+  +
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDV 119

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 72.6 bits (178), Expect = 4e-17
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               A++TG ++GIG       A+ G  + +A    A      +A ++ +   +V  ++ 
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA---EAAIRNLG-RRVLTVKC 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFM-LSKDNIELQFATNHLGSLH 143
           D+S    V  F     +     +IL+NNAGI    PF  L+ +  +  F  N      
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFL 117

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.8 bits (178), Expect = 7e-17
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 5/124 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
           +G + I+TG+S+GIG     + A  G  V +  RN     + K  I+K  +P  K++ + 
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVV 62

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML----SKDNIELQFATNHLGSL 142
            D++  +      +    K   ++IL+NNAG   +          +  +  F  N    +
Sbjct: 63  ADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVI 122

Query: 143 HLHM 146
            +  
Sbjct: 123 EMTQ 126

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 72.0 bits (176), Expect = 9e-17
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 3/124 (2%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           I     T IVTG + GIG   TR +A  G +V +  R+ A   +V + + KE    K   
Sbjct: 5   ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFG-VKTKA 63

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI-MASPFM-LSKDNIELQFATNHLGSL 142
            + D+S+   V K          P++ LI NAG+ +  P   L+ ++    +  N  G  
Sbjct: 64  YQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 143 HLHM 146
           +   
Sbjct: 124 NTCR 127

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 72.0 bits (176), Expect = 1e-16
 Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 3/120 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  AI+TGA +GIG E     A  G  V ++  N  A   V D I +     +      
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRC 67

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM-ASPFMLSKDNIELQFATNHLGSLHLHM 146
           D++S   +   A    +K   ++IL+NNAG     PF +   +    +  N     HL  
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ 127

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 71.8 bits (175), Expect = 1e-16
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 12/121 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
           + +VTGA+ GIG    + L       H+    R++   T+     +K I  ++V VL L 
Sbjct: 5   SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-----LKSIKDSRVHVLPLT 59

Query: 89  LSSLASVRKFASDF--TTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLH 143
           ++   S+  F S          L++LINNAG++    +    ++  I  Q   N    + 
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 144 L 144
           L
Sbjct: 120 L 120

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 72.0 bits (176), Expect = 1e-16
 Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 7/124 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE-IPTAKVDVLE 86
           +  T I+TG+S+GIG  T  + A  G +V +  R+     + +  I+K  +   +V+ + 
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVV 63

Query: 87  LDLSSLASVRKFASDFTTKGLPLNILINNAG------IMASPFMLSKDNIELQFATNHLG 140
            D+++     +  +    +   +++L+NNAG         +      D        N   
Sbjct: 64  ADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQA 123

Query: 141 SLHL 144
            + +
Sbjct: 124 VIEM 127

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 71.0 bits (174), Expect = 2e-16
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 10/119 (8%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTG + GIG    +  A  G  V +       G +V +AI            ++
Sbjct: 4   AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR-PEGKEVAEAI-------GGAFFQV 55

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHL 144
           DL       +F  +       +++L+NNA I    S   +           N    +HL
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 114

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (173), Expect = 2e-16
 Identities = 28/121 (23%), Positives = 41/121 (33%), Gaps = 4/121 (3%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
             TG   ++TGA  GIG  T    A     + +   N     +           AKV   
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTF 61

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNA--GIMASPFMLSKDNIELQFATNHLGSLH 143
            +D S+   +   A     +   ++IL+NNA     +  F      IE  F  N L    
Sbjct: 62  VVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 144 L 144
            
Sbjct: 122 T 122

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.2 bits (169), Expect = 1e-15
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           ++ +GL A+VTGA  GIG +T + L   G  V    R  +       ++ KE P   ++ 
Sbjct: 1   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDL----VSLAKECP--GIEP 54

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSL 142
           + +DL    +  K          P+++L+NNA +  M     ++K+  +  F+ N     
Sbjct: 55  VCVDLGDWDATEKALGGIG----PVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVF 110

Query: 143 HL 144
            +
Sbjct: 111 QV 112

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 68.9 bits (168), Expect = 1e-15
 Identities = 17/119 (14%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           TAIVT      G  +   L+  G  V     +             E+        +L   
Sbjct: 2   TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQ--------KDELEAFAETYPQLKPM 53

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIM--ASPFM-LSKDNIELQFATNHLGSLHLHM 146
           S     +     T+    +++L++N        P    + ++         +    L  
Sbjct: 54  SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN 112

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 68.5 bits (167), Expect = 2e-15
 Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG +SG+G E  ++L   G  V  +  N AAG      +  E+   +   +  
Sbjct: 5   QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG----QQLAAELG-ERSMFVRH 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHLH 145
           D+SS A      +    +   LN+L+NNAGI+          ++       N        
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGC 119

Query: 146 M 146
            
Sbjct: 120 Q 120

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.4 bits (167), Expect = 2e-15
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 9/120 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTG   GIGA   R     G  V +  ++ + G     A+ +E+P      +  
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG----RALEQELP--GAVFILC 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNA---GIMASPFMLSKDNIELQFATNHLGSLHL 144
           D++    V+   S+   +   L+ ++NNA        P   S          N LG+  L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 68.1 bits (166), Expect = 3e-15
 Identities = 26/122 (21%), Positives = 41/122 (33%), Gaps = 5/122 (4%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  AI+TG + GIG          G  V +  R+   G     ++       ++   + 
Sbjct: 5   DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQH 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHLH 145
           D S      K          P++ L+NNAGI  +  +   +        A N  G     
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGT 121

Query: 146 ML 147
            L
Sbjct: 122 RL 123

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.8 bits (165), Expect = 3e-15
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 7/121 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           TG  A+V+G + G+GA   R +   G  V         G     A+  E+       + L
Sbjct: 5   TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEG----KAMAAELA-DAARYVHL 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML--SKDNIELQFATNHLGSLHLH 145
           D++  A  +       T    L++L+NNAGI+    +   +    +     N  G     
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGI 119

Query: 146 M 146
            
Sbjct: 120 R 120

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 67.8 bits (165), Expect = 4e-15
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 8/121 (6%)

Query: 25  IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
           +D T    I   A  GIG +T+R L  R +  F+ +  +   T + +      P   +  
Sbjct: 1   MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAIN-PKVNITF 59

Query: 85  LELDLS-SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLH 143
              D++  +A  +K       +   ++ILIN AGI+          IE   A N  G ++
Sbjct: 60  HTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL------DDHQIERTIAINFTGLVN 113

Query: 144 L 144
            
Sbjct: 114 T 114

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.0 bits (160), Expect = 2e-14
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 12/123 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLA---LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
                ++TGAS G G      LA     G  + ++ R+ +    +K+ +  + P  KV +
Sbjct: 5   GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVL 64

Query: 85  LELDLSSLASVRK----FASDFTTKGLPLNILINNAGIMASPFM-----LSKDNIELQFA 135
              DL + A V++           +GL   +LINNA  +               +   +A
Sbjct: 65  AAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWA 124

Query: 136 TNH 138
            N 
Sbjct: 125 LNL 127

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (158), Expect = 3e-14
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGA  GIG  T + L   G  V    R  A      D++V+E P   ++ + +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECP--GIEPVCV 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM--LSKDNIELQFATNHLGSLHL 144
           DL    +  +          P+++L+NNA +        ++K+  +  F  N    + +
Sbjct: 60  DLGDWEATERALGSVG----PVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 65.1 bits (158), Expect = 4e-14
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 7/123 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
               AI+TG + GIG  T ++    G  V +A      G  V + I        +  +  
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHC 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM----ASPFMLSKDNIELQFATNHLGSLH 143
           D++    VR        K   L+I+  N G++     S      ++ +     N  G+  
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 144 LHM 146
           +  
Sbjct: 122 VAK 124

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 5e-14
 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 3/121 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A +TG  +G+G   T +L+  G    +A R M       + I  +    KV  ++ 
Sbjct: 24  QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHAIQC 82

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNA--GIMASPFMLSKDNIELQFATNHLGSLHLH 145
           D+     V+   S+        NI+INNA    ++    LS +  +        G+  + 
Sbjct: 83  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT 142

Query: 146 M 146
           +
Sbjct: 143 L 143

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 63.1 bits (153), Expect = 2e-13
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 5/99 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           D +G T I+TG + G+GAE  R     G  V +A      G     A  +E+        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----AATARELG-DAARYQ 56

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
            LD++     ++  +    +   ++ L+NNAGI    F+
Sbjct: 57  HLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFL 95

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 62.7 bits (152), Expect = 2e-13
 Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                ++TGA+ GIG  T  + A  G  +           +  +A+           + +
Sbjct: 4   KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVM 56

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           D++  ASV +  ++       L+ +++ AGI 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGIT 88

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 62.9 bits (152), Expect = 3e-13
 Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGA  GIG      L   G  V +A  N A    V   I +         +++D+S
Sbjct: 3   VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVS 60

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQF--ATNHLGSLHLHM 146
               V              ++++NNAG+  S  + S     +      N  G +    
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ 118

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 62.1 bits (150), Expect = 4e-13
 Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 7/125 (5%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVD 83
           D  G   ++TG+S+G+G       A     V +  R+     D  +++++EI     +  
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE---DEANSVLEEIKKVGGEAI 60

Query: 84  VLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGS 141
            ++ D++  + V         +   L+++INNAG+    S   +S  +      TN  G+
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGA 120

Query: 142 LHLHM 146
                
Sbjct: 121 FLGSR 125

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 62.0 bits (150), Expect = 4e-13
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
              A+VTGA+SGIG E  R L   G+ VF+  R           + +     + D    D
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCD 59

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIM 119
           + S+  +    +    +  P+++L+NNAG  
Sbjct: 60  VRSVPEIEALVAAVVERYGPVDVLVNNAGRP 90

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 62.1 bits (150), Expect = 5e-13
 Identities = 26/88 (29%), Positives = 40/88 (45%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+VTG++SGIG      LA +G  + +     AA  +   A +      KV     
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINN 115
           DLS   +VR    +   +   ++IL+NN
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILVNN 90

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 62.1 bits (150), Expect = 6e-13
 Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 3/95 (3%)

Query: 26  DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
              G TA+VTG S GIG      LA  G  V+   RN     +  +   ++    +  V 
Sbjct: 3   SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV- 61

Query: 86  ELDLSSLASVRKFASDFTTK-GLPLNILINNAGIM 119
             DL S     K            LNIL+NNAG++
Sbjct: 62  -CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVV 95

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 61.7 bits (149), Expect = 6e-13
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 3/121 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G  A+ TGA  GIG      L  RG  V +   + +   +   A +K++  A+   ++ 
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG-AQGVAIQA 63

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHLH 145
           D+S  + V        +    L+ +++N+G+        ++++  +  F  N  G   + 
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVA 123

Query: 146 M 146
            
Sbjct: 124 Q 124

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 61.0 bits (147), Expect = 1e-12
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G TA++TG++ GIG          G  V +A  N+ A      A   EI       + L
Sbjct: 4   DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAA----RATAAEIG-PAACAIAL 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSLHLH 145
           D++  AS+ +  ++   +   ++IL+NNA +   A    +++++ +  FA N  G+L + 
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMM 118

Query: 146 M 146
            
Sbjct: 119 Q 119

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 60.0 bits (145), Expect = 3e-12
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 12/124 (9%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   ++TG +SG+G          G  V +  ++     +++           V  +  
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVG 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI-------MASPFMLSKDNIELQFATNHLG 140
           D+ SL   ++ AS    +   ++ LI NAGI       +  P        +  F  N  G
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 141 SLHL 144
            +H 
Sbjct: 119 YIHA 122

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 59.4 bits (143), Expect = 4e-12
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 13/119 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
              + +VTG + GIG    + LA  G  V +  R   A                +  +E+
Sbjct: 6   VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEV 52

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM 146
           D++   +V +  +       P+ +L++NAG+ A  F++     + +   N   +    +
Sbjct: 53  DVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRV 111

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 59.7 bits (144), Expect = 4e-12
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVL 85
            G  A+VTGA  GIG E    L  RG  V +   N    T+  + +V  I         +
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYAN---STESAEEVVAAIKKNGSDAACV 73

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQ--FATNHLGSLH 143
           + ++  +  + +   +       L+I+ +N+G+++   +      E    F  N  G   
Sbjct: 74  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFF 133

Query: 144 LHM 146
           +  
Sbjct: 134 VAR 136

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 59.5 bits (143), Expect = 4e-12
 Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 4/93 (4%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A++TG +  IG      L  +G  V +  R+         A +         + + DLS
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 91  SLASVRKFASDFTTKGL----PLNILINNAGIM 119
             +S+     D            ++L+NNA   
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAY 95

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 59.3 bits (143), Expect = 4e-12
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 5/98 (5%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           +G T +VTGA+SGIG     + A  G  +    R      +   A+      A+   +  
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVA 58

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML 125
           D+S   +V    ++   +   L+ + + AG+  S    
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSW 96

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.8 bits (142), Expect = 9e-12
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 8/126 (6%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN-----MAAGTDVKDAIVKEIPTAKV 82
            G   +VTGA  G+G       A RG  V +         +  G+   D +V+EI   + 
Sbjct: 6   DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRG 64

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLG 140
                +  S+ +  K           +++++NNAGI+   S   +S ++ ++    +  G
Sbjct: 65  GKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124

Query: 141 SLHLHM 146
           S  +  
Sbjct: 125 SFQVTR 130

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 57.9 bits (139), Expect = 1e-11
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 2/104 (1%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   +VTGA   IG  T   LA  G  + +   N  A    + ++ ++    +      
Sbjct: 4   NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVC 61

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIE 131
           D++S  +V             ++ L NNAG   +   +     +
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSD 105

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 55.9 bits (134), Expect = 8e-11
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 11/123 (8%)

Query: 32  AIVTGASSGIGAETTRVLALRGVH-------VFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
            ++TGA  GIG       A    H       + ++ R  A    +      E   A  D 
Sbjct: 4   LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDT 61

Query: 85  LELDLSSLASVRKFASDFTTKGLPLNILINNAGIM--ASPFMLSKDNIELQFATNHLGSL 142
           +  D+S +A VR+  +    +   ++ L+NNAG+    +   L++++ +    TN  G+ 
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 121

Query: 143 HLH 145
            L 
Sbjct: 122 FLT 124

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 55.4 bits (133), Expect = 1e-10
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
            A+VTGA  GIG E  ++LA    HV    R   +   V D I       +      D+S
Sbjct: 12  VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVS 69

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
               + +  +   T+   ++IL+NNAGI      
Sbjct: 70  KKEEISEVINKILTEHKNVDILVNNAGITRDNLF 103

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.0 bits (129), Expect = 4e-10
 Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 3/119 (2%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   IVTGAS GIG E    LA  G HV +  R+      V    + E+  A    +  
Sbjct: 13  QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCL-ELGAASAHYIAG 71

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHL 144
            +  +    +F +        L++LI N     S   F     ++      N L  + L
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVL 130

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 53.6 bits (128), Expect = 5e-10
 Identities = 17/59 (28%), Positives = 24/59 (40%)

Query: 26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDV 84
          +  G  A+VTGAS GIG      LA RG  V     +      + D +        ++V
Sbjct: 1  NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNV 59

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 53.8 bits (128), Expect = 5e-10
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 20/89 (22%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            +++G ++GIGA T +VL   G  +       A                    +  DLS+
Sbjct: 4   IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLST 44

Query: 92  LASVRKFASDFTTK-GLPLNILINNAGIM 119
               ++  +D   K    ++ L+  AG+ 
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLG 73

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 51.4 bits (122), Expect = 4e-09
 Identities = 14/122 (11%), Positives = 27/122 (22%), Gaps = 13/122 (10%)

Query: 29  GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
               +V G    +G+   +    R   V                         V + +  
Sbjct: 2   ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI---------VKMTDSF 52

Query: 89  LSSLASVRKFASDFTTKGLPLNILINNAGIMASPFML---SKDNIELQFATNHLGSLHLH 145
                 V             ++ ++  AG  A           N +L +  +   S    
Sbjct: 53  TEQADQVTAEVGKLLGDQ-KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISS 111

Query: 146 ML 147
            L
Sbjct: 112 HL 113

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 50.1 bits (119), Expect = 8e-09
 Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 19/120 (15%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
                +V  AS GIG     VL+  G  V +  RN           V             
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVV------------ 50

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNA--GIMASPFMLSKDNIELQFATNHLGSLHLH 145
                  +RK       K   ++IL+ NA          L+ ++ +    +  L  + + 
Sbjct: 51  -----CDLRKDLDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIV 105

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 49.7 bits (117), Expect = 1e-08
 Identities = 17/105 (16%), Positives = 30/105 (28%), Gaps = 17/105 (16%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE--------------- 76
           A+VTGA+  +G      L   G  V +     AA  +   A +                 
Sbjct: 5   ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64

Query: 77  --IPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIM 119
                         ++      +  +   T     ++L+NNA   
Sbjct: 65  VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF 109

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 49.3 bits (116), Expect = 2e-08
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 31  TAIVTGASSGIGAETTRVL---ALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
           + ++TG + G+G    + L        H+F   RN     +++D + K      +  ++L
Sbjct: 4   SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDL 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIM---ASPFMLSKDNIELQFATNHLGSLHL 144
                        +  TK   LN+L NNAGI    A    +    +     TN +  + L
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 4e-08
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 13/119 (10%)

Query: 28  TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLEL 87
            G   I+T A+ GIG       A  G  V     N +   +++      I T  +DV   
Sbjct: 5   DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYP--GIQTRVLDV--- 59

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGI--MASPFMLSKDNIELQFATNHLGSLHL 144
                 + +K    F  +   L++L N AG     +     + + +     N      +
Sbjct: 60  ------TKKKQIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (114), Expect = 4e-08
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI 73
          GL A++TG +SG+G  T   L  +G    +     + G      +
Sbjct: 5  GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL 49

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 48.2 bits (114), Expect = 5e-08
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 5/109 (4%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTA--KVDVLELDL 89
            +VTGAS GIG      L   G  V +     A      + + K+I     +      D+
Sbjct: 4   VVVTGASRGIGKAIALSLGKAGCKVLVNYARSA---KAAEEVSKQIEAYGGQAITFGGDV 60

Query: 90  SSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNH 138
           S  A V             +++++NNAGI     ++     +     + 
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDL 109

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 15/125 (12%), Positives = 37/125 (29%), Gaps = 5/125 (4%)

Query: 25  IDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV 82
           +D +G  A+V G ++   +G      L   G  V ++ +         +A          
Sbjct: 4   VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLR---PEAEKLAEALGGA 60

Query: 83  DVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSL 142
            +   D++    +    +        L+ L++         M  +     +        +
Sbjct: 61  LLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 143 HLHML 147
             + L
Sbjct: 121 SAYSL 125

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 45.2 bits (106), Expect = 4e-07
 Identities = 17/118 (14%), Positives = 31/118 (26%), Gaps = 13/118 (11%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS 91
            IV G    +G+         G  V     +     D    I+ +      +  +  L  
Sbjct: 5   VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--SNILVDGNKNWTEQEQSILEQ 62

Query: 92  LASVRKFASDFTTKGLPLNILINNAGIMASPFML---SKDNIELQFATNHLGSLHLHM 146
            AS  + +         ++ +   AG  A           N +L    +   S     
Sbjct: 63  TASSLQGS--------QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK 112

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 45.1 bits (105), Expect = 7e-07
 Identities = 12/63 (19%), Positives = 20/63 (31%), Gaps = 2/63 (3%)

Query: 25 IDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV 82
          ID  G  A + G +   G G    + LA  G  + +     A           +   ++V
Sbjct: 4  IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRV 63

Query: 83 DVL 85
             
Sbjct: 64 LPD 66

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (105), Expect = 8e-07
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 4/117 (3%)

Query: 32  AIVTGASSGIGAETTRVLALRGVHVFMAVRNM--AAGTDVKDAIVKEI--PTAKVDVLEL 87
            ++TG SSGIG      LA      F     +             + +  P   ++ L+L
Sbjct: 5   VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           D+    SV       T   + + +     G++     L +D +      N +G++ +
Sbjct: 65  DVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 44.6 bits (104), Expect = 9e-07
 Identities = 15/47 (31%), Positives = 22/47 (46%)

Query: 31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI 77
          T +VTG + G+G +  R LA RG    + V       D    +V E+
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAEL 57

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.0 bits (103), Expect = 1e-06
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 14/94 (14%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
           +A+VTG +SG+G      L  RG  V +                       +  +E D++
Sbjct: 3   SALVTGGASGLGRAAALALKARGYRVVVLDLRREGE--------------DLIYVEGDVT 48

Query: 91  SLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
               VR+  +    +     ++      +A   +
Sbjct: 49  REEDVRRAVARAQEEAPLFAVVSAAGVGLAEKIL 82

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 43.8 bits (102), Expect = 2e-06
 Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 8/112 (7%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           +VTG S  IG+ T   L   G  V   + N+         +++ +       +E D+ + 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVI-ILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNE 62

Query: 93  ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           A + +   D       ++ +I+ AG+ A     S       +  N  G+L L
Sbjct: 63  ALMTEILHDH-----AIDTVIHFAGLKAVG--ESVQKPLEYYDNNVNGTLRL 107

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 42.8 bits (99), Expect = 4e-06
 Identities = 6/46 (13%), Positives = 15/46 (32%), Gaps = 2/46 (4%)

Query: 28 TGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKD 71
           G   ++ G ++   I     +    +G  +     N +    V+ 
Sbjct: 4  KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRP 49

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 41.8 bits (97), Expect = 8e-06
 Identities = 15/99 (15%), Positives = 35/99 (35%), Gaps = 5/99 (5%)

Query: 28  TGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVL 85
           +G   +VTG +S   I     + +   G  +    +N      V++            VL
Sbjct: 4   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEF---AAQLGSDIVL 60

Query: 86  ELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFM 124
           + D++  AS+    ++        +  +++ G      +
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQL 99

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 41.7 bits (96), Expect = 9e-06
 Identities = 8/43 (18%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 28 TGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTD 68
           G   +V+G    S I     RV   +G  + +   +      
Sbjct: 5  DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ 47

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 39.8 bits (91), Expect = 4e-05
 Identities = 8/56 (14%), Positives = 16/56 (28%)

Query: 34 VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL 89
          + G +  IG          G   ++  R        K  ++         ++E  L
Sbjct: 8  IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASL 63

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 38.5 bits (88), Expect = 9e-05
 Identities = 8/52 (15%), Positives = 15/52 (28%), Gaps = 1/52 (1%)

Query: 31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKV 82
           A++ G    +G      LA  G  + +  R             +    A +
Sbjct: 3  VALLGGTG-NLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI 53

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.0 bits (89), Expect = 9e-05
 Identities = 11/62 (17%), Positives = 23/62 (37%)

Query: 29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD 88
          G   +VTGA+  + +     L   G  V    R+ +   +++     + P      +  D
Sbjct: 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVED 70

Query: 89 LS 90
          + 
Sbjct: 71 ML 72

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 37.2 bits (85), Expect = 2e-04
 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 12/123 (9%)

Query: 22  TQGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAK 81
             G    G  A+V   +  +G  +  +LA  G  V +  R +       D++ K      
Sbjct: 16  AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV 75

Query: 82  VDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGS 141
                 D +S A   K            + +           +L +   + + +   +  
Sbjct: 76  TAAETADDASRAEAVK----------GAHFVFTAGA--IGLELLPQAAWQNESSIEIVAD 123

Query: 142 LHL 144
            + 
Sbjct: 124 YNA 126

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 36.9 bits (84), Expect = 4e-04
 Identities = 15/69 (21%), Positives = 23/69 (33%), Gaps = 5/69 (7%)

Query: 31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
          T  V GA+   GA   RV A  G HV   V ++           +      V + +  L 
Sbjct: 5  TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GLIAEELQAIPNVTLFQGPLL 59

Query: 91 SLASVRKFA 99
          +   +    
Sbjct: 60 NNVPLMDTL 68

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 13/115 (11%), Positives = 39/115 (33%), Gaps = 8/115 (6%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           ++TG +  IG+   R +        + +  +    +  +++     + + +    D+   
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGN-LESLSDISESNRYNFEHADICDS 62

Query: 93  ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHML 147
           A + +    +       + +++ A         S         TN +G+  L  +
Sbjct: 63  AEITRIFEQY-----QPDAVMHLAAESHVD--RSITGPAAFIETNIVGTYALLEV 110

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 35.9 bits (81), Expect = 0.001
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 33  IVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSL 92
           ++TG    +G+        +G+ + +       G       +  +     + +  D+ + 
Sbjct: 4   LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG--NFEFVHGDIRNK 61

Query: 93  ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM 146
             V +  + +       +   + AG +A     S DN  + F  N  G+L+L  
Sbjct: 62  NDVTRLITKY-----MPDSCFHLAGQVAMTT--SIDNPCMDFEINVGGTLNLLE 108

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 35.5 bits (80), Expect = 0.001
 Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 1/57 (1%)

Query: 34 VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD-VKDAIVKEIPTAKVDVLELDL 89
          + GA+  IG    +     G   F+ VR   A ++  K  +++    +  +++   +
Sbjct: 8  LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSI 64

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.4 bits (80), Expect = 0.001
 Identities = 15/72 (20%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS 90
             +VTG +  IG+ T   L   G        N++  T    A ++ +    +   E+DL 
Sbjct: 3   IVLVTGGAGYIGSHTVVELIENGYDCV-VADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 91  SLASVRKFASDF 102
               + K   ++
Sbjct: 62  DRKGLEKVFKEY 73

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.6 bits (80), Expect = 0.001
 Identities = 7/47 (14%), Positives = 17/47 (36%), Gaps = 2/47 (4%)

Query: 32 AIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE 76
            + G   ++G G    + L+ R V +   +        +K+    +
Sbjct: 5  CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGK 51

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 34.8 bits (79), Expect = 0.002
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 10/117 (8%)

Query: 31  TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKEIPTA--KVDVLEL 87
            A++TG +   G+     L  +G  V    R  ++  T+  D I ++  T   K  +   
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 88  DLSSLASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL 144
           DLS  +++ +   +                   S   +S ++ E     + +G+L L
Sbjct: 63  DLSDTSNLTRILREV-------QPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRL 112

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.96
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.96
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.96
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.96
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.96
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.96
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.96
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.96
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.96
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.96
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.96
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.96
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.96
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.96
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.96
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.96
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.95
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.95
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.95
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.95
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.95
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.95
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.95
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.95
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.95
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.95
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.95
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.95
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.95
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.94
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.94
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.94
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.94
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.94
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.94
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.94
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.94
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.94
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.94
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.93
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.93
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.93
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.93
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.92
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.92
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.92
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.92
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.92
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.92
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.89
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.88
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.88
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.87
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.86
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.85
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.85
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.85
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.84
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.81
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.79
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.79
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.79
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.78
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.77
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.77
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.62
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.61
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.56
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.55
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.54
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.52
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.5
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.44
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.42
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.38
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.38
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.38
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.38
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.37
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.3
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.22
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.21
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.21
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.16
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.14
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.12
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.09
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.08
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.06
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.04
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.03
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	98.94
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.83
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	98.8
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	98.57
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.56
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.54
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.33
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.25
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.25
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.18
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.18
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.14
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.12
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	98.03
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	98.0
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.99
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.98
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.96
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.96
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.94
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.9
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.82
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.81
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.79
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.77
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.61
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.59
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.5
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.5
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.44
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.42
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	97.38
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.34
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.33
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.33
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.32
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.32
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.3
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.28
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.24
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.14
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.11
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.08
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.07
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.06
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.02
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.02
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.02
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.0
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.0
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.0
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.98
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.95
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.93
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.92
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.91
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.9
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.88
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.88
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.86
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.73
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.64
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.64
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.63
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.62
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.57
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.56
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.55
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	96.55
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.5
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.5
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.46
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.41
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.38
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.38
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.38
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.37
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	96.36
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.32
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.29
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.27
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	96.25
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	96.23
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.13
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.98
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	95.97
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	95.91
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.89
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.88
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.85
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.84
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.82
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.78
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.68
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.65
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.52
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.49
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	95.49
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	95.44
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.43
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.42
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	95.39
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.31
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	95.3
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.26
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	95.22
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	95.22
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	95.21
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.15
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	95.11
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	95.07
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	95.05
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.92
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.91
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.89
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	94.84
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.79
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.78
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.74
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.67
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	94.67
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	94.65
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.6
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.57
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	94.54
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	94.54
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	94.53
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	94.31
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	94.3
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	94.26
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.22
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.21
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	94.21
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.18
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	94.15
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	94.08
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	94.03
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	94.01
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	93.98
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	93.89
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	93.87
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	93.85
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.79
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.79
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	93.78
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	93.77
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	93.75
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	93.63
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	93.55
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.45
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	93.42
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	93.36
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	93.36
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.3
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.73
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.5
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.2
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	92.08
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	92.0
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	91.83
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.77
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	91.64
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.62
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.52
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.5
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	91.45
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.36
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.35
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	91.13
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	91.09
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	90.81
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	90.81
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	90.71
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	90.51
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	90.5
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	90.44
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.22
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	90.12
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	90.08
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	90.02
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.93
d2eyqa5	211	Transcription-repair coupling factor, TRCF {Escher	89.9
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	89.77
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	89.64
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	89.61
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	89.38
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	89.37
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	89.35
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	89.35
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.15
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	89.14
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	89.04
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	88.98
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	88.94
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	88.82
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	88.76
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	88.61
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.31
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.71
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	87.48
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	87.4
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	87.21
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.03
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.01
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	86.98
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	86.87
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	86.87
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	86.78
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	86.64
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	86.24
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	86.09
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	86.06
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	85.91
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	85.71
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	85.66
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	85.66
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	85.66
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	85.4
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	85.39
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	85.31
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	85.26
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	85.25
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	85.01
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	84.87
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	84.83
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	84.58
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	84.47
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	84.47
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	84.41
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	84.39
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	84.26
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	84.26
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	84.26
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	84.17
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	84.15
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.15
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	83.95
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	83.93
d2b4aa1	118	Hypothetical protein BH3024 {Bacillus halodurans [	83.54
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	83.38
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.3
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	83.13
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	83.12
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	83.11
d1kl7a_	511	Threonine synthase {Baker's yeast (Saccharomyces c	83.06
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	82.87
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	82.83
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	82.82
d1vb3a1	428	Threonine synthase {Escherichia coli [TaxId: 562]}	82.77
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	82.68
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	82.65
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.33
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	82.32
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.28
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	82.0
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	81.92
d1vhca_	212	Hypothetical protein HI0047 {Haemophilus influenza	81.88
d1ko7a2	169	HPr kinase HprK C-terminal domain {Staphylococcus	81.83
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	81.8
d2ax3a2	211	Hypothetical protein TM0922, N-terminal domain {Th	81.75
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	81.69
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	81.69
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	81.23
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.16
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	80.73
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	80.66
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.55

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.96  E-value=5.2e-30  Score=182.48  Aligned_cols=121  Identities=24%  Similarity=0.333  Sum_probs=111.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++||++||||+++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++|+++++++++++.+
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKY-GVETMAFRCDVSNYEEVKKLLEAVKE   79 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-CCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999888888888886654 56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||+||||||+..  +..+++.++|++.|++|+.|+++++|
T Consensus        80 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  123 (251)
T d1vl8a_          80 KFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCR  123 (251)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhh
Confidence            9999999999999864  44578999999999999999999886

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.96  E-value=6.4e-30  Score=182.68  Aligned_cols=121  Identities=22%  Similarity=0.227  Sum_probs=111.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|+.|+++|++|++++|+.+.+++..+++.+..++.++.++.+|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999999888888888887766778999999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||+||||||+..   +..+++.++|+++|++|+.|+++++|
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  124 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE  124 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhh
Confidence            999999999999763   34478999999999999999999876

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=8.5e-30  Score=181.76  Aligned_cols=121  Identities=27%  Similarity=0.336  Sum_probs=112.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.++||++||||+++|||+++|++|+++|++|++++|+.++++++.+++++.  +.++.++.+|++++++++++++++.
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~--g~~~~~~~~Dvs~~~~~~~~~~~~~   83 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL--GGQAFACRCDITSEQELSALADFAI   83 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999899999999876  6789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCCC-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMAS-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|++|||||+..+ ..+.+.++|++++++|+.|+++++|
T Consensus        84 ~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~  127 (255)
T d1fmca_          84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQ  127 (255)
T ss_dssp             HHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHH
Confidence            999999999999998753 3478999999999999999999876

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.96  E-value=1.5e-29  Score=180.93  Aligned_cols=123  Identities=27%  Similarity=0.354  Sum_probs=112.0

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.++++||++||||+++|||+++|++|+++|++|++++|+.+.+.+..+++.+.. +.++.++.+|++|+++++++++++
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF-GVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH-TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHh-CCceEEEEccCCCHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999988888888776654 568999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        82 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~  127 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCR  127 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhh
Confidence            999999999999999864  34578999999999999999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.96  E-value=2.4e-29  Score=179.57  Aligned_cols=117  Identities=25%  Similarity=0.327  Sum_probs=109.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++++.  +.++.++.+|++|+++++++++++.+++|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA--GVEADGRTCDVRSVPEIEALVAAVVERYG   78 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            3899999999999999999999999999999999999999999999876  67899999999999999999999999999


Q ss_pred             CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          108 PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       108 ~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||+||||||+..  +..+++.++|+++|++|+.|+++++|
T Consensus        79 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  119 (257)
T d2rhca1          79 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTK  119 (257)
T ss_dssp             SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHH
Confidence            9999999999864  44578999999999999999999876

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.8e-29  Score=178.03  Aligned_cols=122  Identities=24%  Similarity=0.215  Sum_probs=113.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..++||++||||+++|||+++|++|+++|++|++++|+.++++++.+++.+..++.++.++.||++++++++++++++.+
T Consensus         6 ~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           6 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS   85 (257)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            34899999999999999999999999999999999999999999999999876567899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||+||||||...  +..+.+.++|+..+++|+.|++++++
T Consensus        86 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~  129 (257)
T d1xg5a_          86 QHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTR  129 (257)
T ss_dssp             HHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHH
Confidence            9999999999999764  45589999999999999999999765

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.96  E-value=5.2e-29  Score=178.00  Aligned_cols=121  Identities=30%  Similarity=0.342  Sum_probs=111.4

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++|+||++||||+++|||+++|++|+++|++|++++|+.++++++.+++.+.  +.++.++.+|++|+++++++++++.
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~   80 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK--GFKVEASVCDLSSRSERQELMNTVA   80 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeeCCCHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999998876  6789999999999999999999999


Q ss_pred             hcCC-CccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGL-PLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~-~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++ ++|++|||||+..  +..+.+.++|+++|++|+.|+++++|
T Consensus        81 ~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  126 (259)
T d2ae2a_          81 NHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSV  126 (259)
T ss_dssp             HHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEe
Confidence            9886 7999999999864  34478999999999999999999876

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=6.7e-29  Score=176.70  Aligned_cols=122  Identities=25%  Similarity=0.239  Sum_probs=112.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ..+.+++|++||||+++|||+++|++|+++|++|++++|+.+.++++.+++++.  +.++.++.+|++|++++.++++++
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   81 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF--GYESSGYAGDVSKKEEISEVINKI   81 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT--TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999999899999999776  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||...  +..+.+.++|++++++|+.|+++++|
T Consensus        82 ~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  127 (251)
T d2c07a1          82 LTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQ  127 (251)
T ss_dssp             HHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred             HHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhh
Confidence            999999999999999864  44578999999999999999999876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.96  E-value=4.6e-29  Score=178.30  Aligned_cols=122  Identities=23%  Similarity=0.232  Sum_probs=110.7

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ++++|+||++||||+++|||+++|++|+++|++|++++|+.+++++..+++.+.  +.++.++.||++++++++++++++
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~   79 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK--GFQVTGSVCDASLRPEREKLMQTV   79 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCceEEEeccCCCHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999999899998888776  568999999999999999999999


Q ss_pred             HhcC-CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKG-LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++ |++|++|||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        80 ~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  126 (259)
T d1xq1a_          80 SSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQ  126 (259)
T ss_dssp             HHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeeh
Confidence            9998 68999999999864  45689999999999999999999876

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.6e-29  Score=175.72  Aligned_cols=120  Identities=24%  Similarity=0.236  Sum_probs=111.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+++||+++||||++|||+++|++|+++|++|++++|+.++++++.+++...  +.++..+.||++|++++.++++++.+
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~   80 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL--GAKVHTFVVDCSNREDIYSSAKKVKA   80 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999999999999998876  67899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||...  +..+.++++|++++++|+.|++++++
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  124 (244)
T d1yb1a_          81 EIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTK  124 (244)
T ss_dssp             HTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHH
Confidence            9999999999999874  34468889999999999999999876

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.96  E-value=8.2e-29  Score=177.13  Aligned_cols=120  Identities=22%  Similarity=0.257  Sum_probs=108.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+|+||+++|||+++|||+++|++|+++|++|++++|+.+ ..+.+.+++++.  +.++.++.+|++|+++++++++++.
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV--GGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999999864 466777777766  6789999999999999999999999


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||+||||||+..  +..+++.++|++++++|+.|+++++|
T Consensus        81 ~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  125 (261)
T d1geea_          81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSR  125 (261)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHH
Confidence            99999999999999864  34478999999999999999999876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.96  E-value=6.8e-29  Score=177.47  Aligned_cols=119  Identities=21%  Similarity=0.222  Sum_probs=110.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|+.|+++|++|++++|+.+.++++.+++.+.  +.++.++.||++|+++++++++++.++
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRD   79 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999998889888888776  678999999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++|||||+..   +..+++.++|++++++|+.|+++++|
T Consensus        80 ~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  123 (260)
T d1zema1          80 FGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLK  123 (260)
T ss_dssp             HSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCeehhhhccccccCccccccHHHHHhhccccccccccchh
Confidence            999999999999763   34579999999999999999999876

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.96  E-value=8.4e-29  Score=176.54  Aligned_cols=116  Identities=22%  Similarity=0.231  Sum_probs=107.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|++||||+++|||+++|++|+++|++|++++|+++.++++.+++.+.  +.++.++.||++|+++++++++++.+++|+
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA--GGHAVAVKVDVSDRDQVFAAVEQARKTLGG   78 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            378899999999999999999999999999999999999999998876  678999999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||+..  +..+.++++|++++++|+.|+++++|
T Consensus        79 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  118 (255)
T d1gega_          79 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ  118 (255)
T ss_dssp             CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhh
Confidence            999999999864  44578999999999999999999876

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.96  E-value=4.5e-29  Score=178.03  Aligned_cols=117  Identities=24%  Similarity=0.389  Sum_probs=106.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |.++||+++|||+++|||+++|+.|+++|++|++++|+.+.++++.+++     +.++.++.+|++|+++++++++++.+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----~~~~~~~~~Dvt~~~~v~~~~~~~~~   75 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI-----GPAACAIALDVTDQASIDRCVAELLD   75 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEeeCCCHHHHHHHHHHHHH
Confidence            3589999999999999999999999999999999999987777777666     56789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        76 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  119 (256)
T d1k2wa_          76 RWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQ  119 (256)
T ss_dssp             HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchh
Confidence            9999999999999864  44578999999999999999999876

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.96  E-value=8.1e-29  Score=176.27  Aligned_cols=118  Identities=22%  Similarity=0.251  Sum_probs=108.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++..   +.++.++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT---PDQIQFFQHDSSDEDGWTKLFDATEKA   79 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC---CCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            48999999999999999999999999999999999998888877777743   457899999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||+||||||...  +..+++.++|+++|++|+.|+++++|
T Consensus        80 ~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~  122 (251)
T d1zk4a1          80 FGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTR  122 (251)
T ss_dssp             HSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCceEEEeccccccccchhcccccchhhhccccccccchhHH
Confidence            999999999999864  45689999999999999999999876

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.96  E-value=1.1e-28  Score=174.91  Aligned_cols=116  Identities=22%  Similarity=0.249  Sum_probs=105.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|++++++++.+++     +.++.++.+|++|+++++++++++.++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-----ADAARYVHLDVTQPAQWKAAVDTAVTA   77 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----hCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999987777666665     456888999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++|||||+..  +..+++.++|+++|++|+.|+++++|
T Consensus        78 ~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  120 (244)
T d1nffa_          78 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIR  120 (244)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHH
Confidence            999999999999864  45689999999999999999999876

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.8e-28  Score=173.77  Aligned_cols=116  Identities=27%  Similarity=0.326  Sum_probs=106.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++||+++|||+++|||+++|++|+++|++|++++|+++.++++.+++     +.+...+.+|++|+++++++++++.++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   75 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL-----GANGKGLMLNVTDPASIESVLEKIRAE   75 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh-----CCCCcEEEEEecCHHHhhhhhhhhhcc
Confidence            478999999999999999999999999999999999988877777776     456788999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||...  +..+.+.++|++.|++|+.|+++++|
T Consensus        76 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  118 (243)
T d1q7ba_          76 FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSK  118 (243)
T ss_dssp             TCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCcceehhhhhhccccccccccccccccccceeechhhhhHH
Confidence            999999999999864  34578999999999999999999886

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.95  E-value=9.8e-29  Score=176.61  Aligned_cols=120  Identities=26%  Similarity=0.256  Sum_probs=107.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|+. +.++++.+++.+.. +.++.++.+|++|+++++++++++.+
T Consensus         1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~   79 (260)
T d1x1ta1           1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVR   79 (260)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred             CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            37899999999999999999999999999999999975 45667777776554 56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|+++|++|+.|+++++|
T Consensus        80 ~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  123 (260)
T d1x1ta1          80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTA  123 (260)
T ss_dssp             HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccc
Confidence            9999999999999864  34578999999999999999999876

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.95  E-value=3.3e-28  Score=172.71  Aligned_cols=117  Identities=23%  Similarity=0.264  Sum_probs=103.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|+.|+++|++|++++|+++.  +....++..  +.++.++.+|++|+++++++++++.++
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~--g~~~~~~~~Dvs~~~~v~~~~~~~~~~   77 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNL--GRRVLTVKCDVSQPGDVEAFGKQVIST   77 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHc--CCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999998642  333444443  678999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.++++|+++|++|+.|+++++|
T Consensus        78 ~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  120 (247)
T d2ew8a1          78 FGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK  120 (247)
T ss_dssp             HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHH
Confidence            999999999999864  34578999999999999999999886

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.6e-28  Score=176.64  Aligned_cols=122  Identities=23%  Similarity=0.279  Sum_probs=111.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC---CCeeEEEEecCCCHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP---TAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ..|+||++||||+++|||+++|++|+++|++|++++|+.+++++..+++.+..+   +.++.++.||++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            469999999999999999999999999999999999999988888888876542   46899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|+||||||...  +..+.+.++|++++++|+.|+++++|
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  134 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCK  134 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHH
Confidence            9999999999999999764  44578999999999999999999876

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.95  E-value=1.6e-28  Score=175.01  Aligned_cols=116  Identities=22%  Similarity=0.215  Sum_probs=104.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +|+||++||||+++|||+++|++|+++|++|++++|+.++++++.+++     +.++.++.+|++++++++++++++.++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~   76 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREE   76 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCceEEEEcccCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999977666555544     567899999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++++++|+.|+++++|
T Consensus        77 ~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  119 (254)
T d1hdca_          77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMK  119 (254)
T ss_dssp             HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHH
Confidence            999999999999864  34578999999999999999999876

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=2.4e-28  Score=172.94  Aligned_cols=115  Identities=20%  Similarity=0.259  Sum_probs=102.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |.++||++||||+++|||+++|++|+++|++|++++|+.+.+++..+++       +..++.||++|+++++++++++.+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-------~~~~~~~Dv~~~~~v~~~~~~~~~   73 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-------GAHPVVMDVADPASVERGFAEALA   73 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-------TCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-------CCeEEEEecCCHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999976665554433       356789999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++.+++|+.|+++++|
T Consensus        74 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  117 (242)
T d1ulsa_          74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAK  117 (242)
T ss_dssp             HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhh
Confidence            9999999999999874  34479999999999999999999876

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.95  E-value=3.3e-28  Score=174.24  Aligned_cols=121  Identities=24%  Similarity=0.258  Sum_probs=106.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++.+.. +..++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999998999999887763 234799999999999999999999999


Q ss_pred             cCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..      ...+.+.++|++.|++|+.|+++++|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  129 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTK  129 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHh
Confidence            9999999999999752      23356889999999999999999876

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.95  E-value=4.6e-28  Score=173.78  Aligned_cols=118  Identities=21%  Similarity=0.323  Sum_probs=107.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++...   ..+.++.||++|+++++++++++.++
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~   79 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP---DVISFVHCDVTKDEDVRNLVDTTIAK   79 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCC---CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999988888888887543   46788999999999999999999999


Q ss_pred             CCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++|||||+..    ...+.+.++|++++++|+.|+++++|
T Consensus        80 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  124 (268)
T d2bgka1          80 HGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAK  124 (268)
T ss_dssp             HSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhh
Confidence            999999999999753    23478999999999999999999886

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.95  E-value=4.1e-28  Score=172.78  Aligned_cols=116  Identities=25%  Similarity=0.266  Sum_probs=106.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+||++||||+++|||+++|++|+++|++|++++|+++.++++.+++     +.+..++.+|++|+++++++++++.++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~~   77 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRR   77 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----CCCeEEEEeecCCHHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999999988777777766     567889999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|+||||||+..  +..+.+.++|++.|++|+.|+++++|
T Consensus        78 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  120 (253)
T d1hxha_          78 LGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQ  120 (253)
T ss_dssp             HCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence            999999999999864  45589999999999999999999876

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.5e-28  Score=172.27  Aligned_cols=115  Identities=23%  Similarity=0.331  Sum_probs=102.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++||++||||+++|||+++|+.|+++|++|++++|+++.++++.+++      .++.++.||++|+++++++++++.++
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~------~~~~~~~~Dvs~~~~v~~~~~~~~~~   76 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRR   76 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEccCCCHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999999999876655554433      45788999999999999999999999


Q ss_pred             CCCccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||+||||||+..   +..+.+.++|+++|++|+.|+++++|
T Consensus        77 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  120 (250)
T d1ydea1          77 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTK  120 (250)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHH
Confidence            999999999999753   23368999999999999999999876

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1e-27  Score=172.34  Aligned_cols=121  Identities=20%  Similarity=0.238  Sum_probs=108.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++||++||||+++|||+++|++|+++|++|++++|+.++++++.+++.+.. .+.++.++.||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999998999998887653 235799999999999999999999999


Q ss_pred             cCCCccEEEEccccCCCC------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASP------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||...+.      .+.+.++|++++++|+.|+++++|
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~  129 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTK  129 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHH
Confidence            999999999999986421      246777899999999999999876

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.95  E-value=2.9e-27  Score=168.79  Aligned_cols=121  Identities=27%  Similarity=0.297  Sum_probs=110.9

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +++|+||++||||+++|||+++|++|+++|++|++++|+++.++++.++++..  +..+.++.+|++++++++++++++.
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   78 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK--GLNVEGSVCDLLSRTERDKLMQTVA   78 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCCceEEEeecCCHHHHHHHHHHHH
Confidence            36799999999999999999999999999999999999998888888888776  6788899999999999999999999


Q ss_pred             hcC-CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKG-LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~-~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++ +.+|++|||||...  +..+++.++|++++++|+.+++++++
T Consensus        79 ~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~  124 (258)
T d1ae1a_          79 HVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQ  124 (258)
T ss_dssp             HHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccc
Confidence            998 57999999999864  45578999999999999999999875

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1.9e-27  Score=171.11  Aligned_cols=121  Identities=23%  Similarity=0.314  Sum_probs=108.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +++||+++|||+++|||+++|++|+++|++|++++|+.++++++.+++.+.. ++.++.++.+|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988999999887753 234789999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CC--CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SP--FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~--~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||...  +.  .+.+.++|++++++|+.|+++++|
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  126 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQ  126 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccc
Confidence            9999999999999753  22  246889999999999999999876

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.94  E-value=1.5e-27  Score=168.67  Aligned_cols=115  Identities=24%  Similarity=0.353  Sum_probs=106.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCE-------EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVH-------VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~-------v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +++||||+++|||+++|++|+++|++       |++++|+.+.++++.+++.+.  +.++.++.||++|+++++++++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~--g~~~~~~~~Dvt~~~~v~~~~~~~   79 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE--GALTDTITADISDMADVRRLTTHI   79 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT--TCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHH
Confidence            56899999999999999999999987       899999998899999988876  678999999999999999999999


Q ss_pred             HhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|++|+||||||+..  +..+.+.++|+++|++|+.|+++++|
T Consensus        80 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~  125 (240)
T d2bd0a1          80 VERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQ  125 (240)
T ss_dssp             HHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHH
Confidence            999999999999999864  44578999999999999999999876

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.6e-27  Score=168.14  Aligned_cols=113  Identities=23%  Similarity=0.290  Sum_probs=99.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|++|+++|++|++++|+.+.. +..+++     +  ..++.+|++|+++++++++++.++
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~-----~--~~~~~~Dv~~~~~v~~~~~~~~~~   73 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI-----G--GAFFQVDLEDERERVRFVEEAAYA   73 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH-----T--CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc-----C--CeEEEEeCCCHHHHHHHHHHHHHh
Confidence            48999999999999999999999999999999999987642 233322     2  346799999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||+||||||+..  +..+.+.++|+++|++|+.|+++++|
T Consensus        74 ~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  116 (248)
T d2d1ya1          74 LGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSA  116 (248)
T ss_dssp             HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhh
Confidence            999999999999864  45689999999999999999999876

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.4e-27  Score=171.80  Aligned_cols=115  Identities=25%  Similarity=0.326  Sum_probs=104.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++||||+++|||+++|++|+++ |++|++++|+.++++++.+++++.  +.++.++.||++|.++++++++++.+++|+
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE--GLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT--TCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            56699999999999999999986 899999999999999999999887  567889999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ||+||||||+..  +..+.+.++|+..|++|++|+++++|
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  121 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCT  121 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999874  33466778999999999999999876

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.94  E-value=3.2e-27  Score=170.05  Aligned_cols=117  Identities=21%  Similarity=0.241  Sum_probs=102.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |.|+||++||||+++|||+++|+.|+++|++|++++|+.++++++.+++     +.++..+.+|++++++++++++++.+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~   75 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH-----GDNVLGIVGDVRSLEDQKQAASRCVA   75 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCCeeEEecccccHHHHHHHHHHHHH
Confidence            4589999999999999999999999999999999999977776666554     56899999999999999999999999


Q ss_pred             cCCCccEEEEccccCCC-------CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS-------PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~-------~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|++|||||+...       ..+.+.++|+++|++|+.|+++++|
T Consensus        76 ~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~  124 (276)
T d1bdba_          76 RFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK  124 (276)
T ss_dssp             HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence            99999999999997531       1244556799999999999999876

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.94  E-value=5.7e-27  Score=165.37  Aligned_cols=109  Identities=22%  Similarity=0.313  Sum_probs=97.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      +.++||++||||+++|||+++|++|+++|++|++++|+.+..             .++..+.+|++|+++++++++++.+
T Consensus         3 psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-------------~~~~~~~~Dv~~~~~v~~~~~~~~~   69 (237)
T d1uzma1           3 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-------------KGLFGVEVDVTDSDAVDRAFTAVEE   69 (237)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-------------cCceEEEEecCCHHHHHHHHHHHHH
Confidence            358999999999999999999999999999999999986542             3567889999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+.+.++|++++++|+.++++++|
T Consensus        70 ~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~  113 (237)
T d1uzma1          70 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQ  113 (237)
T ss_dssp             HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhh
Confidence            9999999999999864  45588999999999999999999876

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.94  E-value=4e-27  Score=166.52  Aligned_cols=116  Identities=22%  Similarity=0.225  Sum_probs=100.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|+.|+++|++|++++|+.+.+++..+++     +.++.++.+|++++++++++++++.++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dls~~~~i~~~~~~i~~~   76 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL-----EAEAIAVVADVSDPKAVEAVFAEALEE   76 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC-----CSSEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999876554444433     578999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|++|++|||||...  +..+.+.++|+..+++|+.++++++|
T Consensus        77 ~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k  119 (241)
T d2a4ka1          77 FGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR  119 (241)
T ss_dssp             HSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             hCCccEeccccccccccchhhhhcccccccccccccccccccc
Confidence            999999999999764  44589999999999999999999876

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-27  Score=168.21  Aligned_cols=114  Identities=27%  Similarity=0.375  Sum_probs=104.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..||++||||+++|||+++|+.|+++|++|++++|+.+++++..+++.+..++.++.++.+|++|+++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            36999999999999999999999999999999999999889998888877667789999999999999999999999999


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |++|+||||||+..      .++|++.+++|+.+++++++
T Consensus        81 G~iDilVnnAg~~~------~~~~~~~~~~n~~~~~~~~~  114 (254)
T d2gdza1          81 GRLDILVNNAGVNN------EKNWEKTLQINLVSVISGTY  114 (254)
T ss_dssp             SCCCEEEECCCCCC------SSSHHHHHHHHTHHHHHHHH
T ss_pred             CCcCeecccccccc------cccchheeeeehhhHHHHHH
Confidence            99999999999853      34688999999999998875

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.94  E-value=8.9e-27  Score=165.02  Aligned_cols=115  Identities=23%  Similarity=0.243  Sum_probs=103.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEc-cCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVR-NMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r-~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +++||||+++|||+++|++|+++|++|+++++ +.+..+++.+++.+.  +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY--GGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--TCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc--CCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999998765 555677777888776  678999999999999999999999999999


Q ss_pred             ccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+||||||...  +..+.+.++|++.+++|+.|+++++|
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~  119 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ  119 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHH
Confidence            999999999864  34578999999999999999999876

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.94  E-value=2.9e-26  Score=163.58  Aligned_cols=119  Identities=21%  Similarity=0.283  Sum_probs=106.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .|+||++||||+++|||+++|+.|+++|++|+++++..+ ..+++.+++.+.  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~~~~   80 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL--GAQGVAIQADISKPSEVVALFDKAVS   80 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc--CCCceEecCCCCCHHHHHHHHHHHHH
Confidence            489999999999999999999999999999999876544 467777777766  67899999999999999999999999


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|+||++|||||...  +..+.+.++|++.|++|+.++++++|
T Consensus        81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  124 (259)
T d1ja9a_          81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQ  124 (259)
T ss_dssp             HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehh
Confidence            9999999999999864  34468999999999999999999876

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.9e-26  Score=163.34  Aligned_cols=113  Identities=21%  Similarity=0.318  Sum_probs=97.0

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.|+||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++      ..+..+.+|++|++++++++    
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~d~~~v~~~~----   71 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC------PGIEPVCVDLGDWEATERAL----   71 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----
Confidence            45689999999999999999999999999999999999976665555443      34677899999999887665    


Q ss_pred             hcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|++|+||||||+..  +..+.+.++|++.+++|+.++++++|
T Consensus        72 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  116 (244)
T d1pr9a_          72 GSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQ  116 (244)
T ss_dssp             TTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHH
Confidence            46799999999999864  44578999999999999999999876

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=1.9e-26  Score=163.14  Aligned_cols=112  Identities=23%  Similarity=0.385  Sum_probs=96.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++||++||||+++|||+++|++|+++|++|++++|+.+.++++.+++      ..+..+.+|++|++++++++    +
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------~~~~~~~~Dv~~~~~v~~~~----~   70 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC------PGIEPVCVDLGDWDATEKAL----G   70 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHH----T
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc------CCCeEEEEeCCCHHHHHHHH----H
Confidence            4689999999999999999999999999999999999876655554443      34677899999999887655    5


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++|++|+||||||+..  +..+++.++|++.+++|+.|+++++|
T Consensus        71 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  114 (242)
T d1cyda_          71 GIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQ  114 (242)
T ss_dssp             TCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHH
Confidence            6799999999999864  45589999999999999999999876

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.93  E-value=5.4e-26  Score=163.15  Aligned_cols=122  Identities=22%  Similarity=0.333  Sum_probs=108.9

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      +..+|+||++||||+++|||+++|+.|+++|++|++++++.+ .++++.+++++.  +.++.++.+|++|++++.+++++
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~--g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN--GSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh--CCceeeEeCCCCCHHHHHHHHHH
Confidence            445699999999999999999999999999999999998754 466677777766  67899999999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|++|||+|...  +..+.+.++|++.+++|+.|+++++|
T Consensus        90 ~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~  136 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAR  136 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecc
Confidence            9999999999999999764  34478999999999999999999876

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=7.6e-26  Score=161.33  Aligned_cols=121  Identities=25%  Similarity=0.285  Sum_probs=108.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHH---CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLAL---RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~---~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .|+||+++|||+++|||+++|++|++   +|++|++++|+.+.++++.+++....++.++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999986   799999999999999999999988877789999999999999999999988


Q ss_pred             Hhc----CCCccEEEEccccCCC-----CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          103 TTK----GLPLNILINNAGIMAS-----PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       103 ~~~----~~~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.    ++.+|++|||||..++     ..+.++++|+++|++|+.|+++++|
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~  135 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTS  135 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHH
Confidence            763    4679999999997532     3378889999999999999999876

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.93  E-value=8.1e-26  Score=160.89  Aligned_cols=115  Identities=25%  Similarity=0.369  Sum_probs=101.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~  103 (147)
                      ++++||++||||+++|||+++|++|+++|++|++++|+.+..+ ...++....++.++.++.+|++ +.++++++++++.
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   79 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-HHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHH-HHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999998877644 3455666666779999999998 6778999999999


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||+||||||..      +.+.|++++++|+.|++++++
T Consensus        80 ~~~g~iDilvnnAG~~------~~~~~~~~~~vNl~g~~~~~~  116 (254)
T d1sbya1          80 DQLKTVDILINGAGIL------DDHQIERTIAINFTGLVNTTT  116 (254)
T ss_dssp             HHHSCCCEEEECCCCC------CTTCHHHHHHHHTHHHHHHHH
T ss_pred             HHcCCCCEEEeCCCCC------CHHHHHHHHHHHhHHHHHHHH
Confidence            9999999999999964      457799999999999999876

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=2.4e-25  Score=158.44  Aligned_cols=120  Identities=11%  Similarity=0.155  Sum_probs=102.2

Q ss_pred             CCCCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        24 ~~~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .++|+||++||||+++  |||+++|++|+++|++|++++|+++..+. .+++...  +.+..++.+|++|++++++++++
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~-~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPE-AEKLAEA--LGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHH--TTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHH-HHHhhhc--cCcccccccccCCHHHHHHHHHH
Confidence            3579999999999986  99999999999999999999998654343 3444444  45678899999999999999999


Q ss_pred             HHhcCCCccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          102 FTTKGLPLNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+++|++|++|||||+..      +..+.+.++|+..+++|+.++++++|
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  130 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVAR  130 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHH
Confidence            9999999999999999752      34478889999999999999998875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1e-25  Score=163.89  Aligned_cols=118  Identities=21%  Similarity=0.258  Sum_probs=100.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc---------cchHHHHHHHhhCCCCeeEEEEecCCCHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA---------AGTDVKDAIVKEIPTAKVDVLELDLSSLAS   94 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~---------~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~   94 (147)
                      +++++||++||||+++|||+++|+.|+++|++|++++++.+         .++++.+++..     +.....+|++|.++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~   76 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGGKAVANYDSVEA   76 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTCEEEEECCCGGG
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-----cccccccccchHHH
Confidence            35789999999999999999999999999999999987642         23344444433     33456789999999


Q ss_pred             HHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++++++.+++|+||+||||||+..  +..+++.++|++++++|+.|+++++|
T Consensus        77 ~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~  130 (302)
T d1gz6a_          77 GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTR  130 (302)
T ss_dssp             HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHH
Confidence            99999999999999999999999874  44589999999999999999999886

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.92  E-value=1.2e-25  Score=159.53  Aligned_cols=115  Identities=26%  Similarity=0.327  Sum_probs=99.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |++|++||||+++|||+++|++|+++|+  +|++++|+.++++++.    +.. +.++.++.+|++|.++++++++++.+
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~----~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~   75 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK----SIK-DSRVHVLPLTVTCDKSLDTFVSKVGE   75 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH----TCC-CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHH----Hhh-CCceEEEEEecCCHHHHHHHHHHHHH
Confidence            4569999999999999999999999996  6899999987766543    332 56899999999999999999999988


Q ss_pred             cCC--CccEEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGL--PLNILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~--~id~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .++  ++|+||||||+..   +..+.+.++|++.|++|+.|++++++
T Consensus        76 ~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  122 (250)
T d1yo6a1          76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ  122 (250)
T ss_dssp             HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             HhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHH
Confidence            765  4999999999864   34478899999999999999999875

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.92  E-value=8.1e-25  Score=158.39  Aligned_cols=122  Identities=22%  Similarity=0.222  Sum_probs=109.6

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +..+++||++||||+++|||+++|++|+++|++|++++|+.+++++..+++.+.. +.++.++.+|++++++++++++.+
T Consensus        19 ~~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~-g~~~~~~~~D~~~~~~v~~~~~~~   97 (294)
T d1w6ua_          19 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT-GNKVHAIQCDVRDPDMVQNTVSEL   97 (294)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHH-SSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhc-CCceEEEEecccChHHHHHHhhhh
Confidence            3458999999999999999999999999999999999999988888888887664 578899999999999999999999


Q ss_pred             HhcCCCccEEEEccccCCC--CCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          103 TTKGLPLNILINNAGIMAS--PFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .++++++|++|||||....  ....+.++++..+.+|+.+.+.+.
T Consensus        98 ~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~  142 (294)
T d1w6ua_          98 IKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVT  142 (294)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhh
Confidence            9999999999999997643  346888999999999999988765

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=9.2e-25  Score=156.48  Aligned_cols=120  Identities=23%  Similarity=0.230  Sum_probs=109.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++.... +..+..+.+|+++.+.+...++.+...
T Consensus        11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~   89 (269)
T d1xu9a_          11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKL   89 (269)
T ss_dssp             GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhh-cccchhhhhhhhhHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999999999998888888876654 678999999999999999999999999


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+|+++||||...  +..+.+.++|++++++|+.|++++++
T Consensus        90 ~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~  132 (269)
T d1xu9a_          90 MGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTV  132 (269)
T ss_dssp             HTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHH
Confidence            999999999999764  34578999999999999999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.92  E-value=8.1e-25  Score=155.05  Aligned_cols=114  Identities=26%  Similarity=0.440  Sum_probs=99.0

Q ss_pred             CEEEEecCCCchhHHHHHHHH---HCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH--h
Q 044688           30 LTAIVTGASSGIGAETTRVLA---LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT--T  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~---~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~  104 (147)
                      |++||||+++|||+++|++|+   ++|++|++++|+.++++++.+ +.+.  +.++.++.||++|+++++++++++.  .
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~--~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   79 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN--HSNIHILEIDLRNFDAYDKLVADIEGVT   79 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH--CTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhc--CCcEEEEEEEeccHHHHHHHHhhhHHHh
Confidence            789999999999999999997   478999999999988877654 4444  4689999999999999999999884  4


Q ss_pred             cCCCccEEEEccccCCC---CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMAS---PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~---~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++++|+||||||+...   ..+.+.++|++++++|+.|++++++
T Consensus        80 ~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~  124 (248)
T d1snya_          80 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAK  124 (248)
T ss_dssp             GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHH
Confidence            78999999999998642   3368899999999999999999875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.89  E-value=6.1e-24  Score=150.89  Aligned_cols=108  Identities=14%  Similarity=0.046  Sum_probs=94.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++||||+++|||+++|++|+++|++|++++|+.+..+++..... .       +..+|+++.++++++++++.+++|+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-~-------~~~~dv~~~~~~~~~~~~~~~~~G~iD   73 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-T-------YPQLKPMSEQEPAELIEAVTSAYGQVD   73 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-H-------CTTSEECCCCSHHHHHHHHHHHHSCCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-c-------EEEeccCCHHHHHHHHHHHHHHcCCCC
Confidence            79999999999999999999999999999999877766554332 2       225899999999999999999999999


Q ss_pred             EEEEccccCC---CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMA---SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~---~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +||||||+..   +..+.+.++|++.+++|+.++++++|
T Consensus        74 iLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~  112 (252)
T d1zmta1          74 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVN  112 (252)
T ss_dssp             EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             EEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            9999999753   33478999999999999999999876

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=3e-23  Score=145.81  Aligned_cols=103  Identities=21%  Similarity=0.199  Sum_probs=85.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |+||++||||+++|||+++|++|+++|++|++++|+.+.       +.+.  +  ..++.+|+++.      ++.+.+++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~-------l~~~--~--~~~~~~Dv~~~------~~~~~~~~   64 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL-------LKRS--G--HRYVVCDLRKD------LDLLFEKV   64 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH-------HHHT--C--SEEEECCTTTC------HHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH-------HHhc--C--CcEEEcchHHH------HHHHHHHh
Confidence            689999999999999999999999999999999998532       2222  2  23567999764      34456678


Q ss_pred             CCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +++|+||||||+..  +..+++.++|++.+++|+.++++++|
T Consensus        65 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  106 (234)
T d1o5ia_          65 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR  106 (234)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             CCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhh
Confidence            99999999999764  34578999999999999999999876

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=6.6e-23  Score=147.89  Aligned_cols=116  Identities=23%  Similarity=0.315  Sum_probs=93.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEE---EccCccchHHHHHHHhh-CCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMA---VRNMAAGTDVKDAIVKE-IPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~---~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .|++||||+++|||+++|+.|+++|++|+.+   .|+.+..+++.+...+. ..+.++.++.||++|++++.++++++. 
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~-   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT-
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc-
Confidence            5889999999999999999999999875554   44444444444433332 125689999999999999999998764 


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .|.+|++|||+|...  +..+.+.++|++++++|+.|+++++|
T Consensus        81 -~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~  123 (285)
T d1jtva_          81 -EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQ  123 (285)
T ss_dssp             -TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHH
T ss_pred             -ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHH
Confidence             378999999999764  34478999999999999999999876

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.1e-22  Score=142.33  Aligned_cols=110  Identities=19%  Similarity=0.266  Sum_probs=91.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++||++||||+++|||+++|+.|+++|++|++++|++++++++.    +   ...+....+|+.+.+.++.    ..+.
T Consensus         3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~----~---~~~~~~~~~d~~~~~~~~~----~~~~   71 (245)
T d2ag5a1           3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE----K---YPGIQTRVLDVTKKKQIDQ----FANE   71 (245)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG----G---STTEEEEECCTTCHHHHHH----HHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----h---ccCCceeeeeccccccccc----cccc
Confidence            489999999999999999999999999999999999866544432    2   2346678889887765554    4455


Q ss_pred             CCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++++|+||||+|...  +..+.+.++|+..+++|+.|+++++|
T Consensus        72 ~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  114 (245)
T d2ag5a1          72 VERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIK  114 (245)
T ss_dssp             CSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHH
Confidence            689999999999875  34578999999999999999999876

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=2e-21  Score=137.22  Aligned_cols=116  Identities=19%  Similarity=0.243  Sum_probs=103.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++||++||||+++|||+++|++|+++|++|++++|+.+.+++..+++     +.+.....+|+.+.+.++....++...
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-----GNNCVFAPADVTSEKDVQTALALAKGK   76 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-----CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCCcccccccccccccccccccccccc
Confidence            589999999999999999999999999999999999998888777776     567888899999999999999999988


Q ss_pred             CCCccEEEEccccCC--------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++.+|.+++|+++..        +..+.+.++|++++++|+.|+++++|
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~  125 (248)
T d2o23a1          77 FGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIR  125 (248)
T ss_dssp             HSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHH
Confidence            899999999987642        22357889999999999999999876

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.85  E-value=5e-21  Score=135.92  Aligned_cols=115  Identities=25%  Similarity=0.385  Sum_probs=98.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++++||||+++|||+++|++|+++|+ +|++++|+.   +..+++.+++.+.  +.++.++.||++|++++.++++++.+
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~--g~~v~~~~~Dv~d~~~~~~~~~~i~~   86 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL--GARTTVAACDVTDRESVRELLGGIGD   86 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc--cccccccccccchHHHHHHhhccccc
Confidence            46999999999999999999999998 689999874   3455566666665  78999999999999999999998755


Q ss_pred             cCCCccEEEEccccCC--CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMA--SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                       .+++|++|||+|...  +..+.++++|+.++++|+.|++++.+
T Consensus        87 -~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~  129 (259)
T d2fr1a1          87 -DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHE  129 (259)
T ss_dssp             -TSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHH
T ss_pred             -cccccccccccccccccccccccHHHHHHHhhhhccchhHHHH
Confidence             468999999999875  34478999999999999999998764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.85  E-value=1.2e-21  Score=141.41  Aligned_cols=124  Identities=18%  Similarity=0.125  Sum_probs=92.1

Q ss_pred             cCCCCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC---------C-CeeEEEEec--
Q 044688           23 QGIDATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP---------T-AKVDVLELD--   88 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---------~-~~~~~~~~D--   88 (147)
                      ++++|+||++||||+++  |||+++|++|+++|++|++++|+................         . ..-....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            45789999999999875  999999999999999999999975432222221111100         0 011222333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHhcCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           89 ------------------LSSLASVRKFASDFTTKGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        89 ------------------~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                                        .++..+++++++++.++||+||+||||||...    +..+.+.++|++.+++|+.+++++++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              24556678899999999999999999999742    34578999999999999999998875

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.85  E-value=3.3e-21  Score=138.23  Aligned_cols=116  Identities=17%  Similarity=0.200  Sum_probs=89.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEE-----------------EecCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVL-----------------ELDLSS   91 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~-----------------~~D~~~   91 (147)
                      .++||||+++|||+++|++|+++|++|++++++. +..+.+.+++.+..+ .....+                 .+|+++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~dv~~   81 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNVATAPVSGADGSAPVTL   81 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcC-CceEEEEeecccccccccccccccccCCC
Confidence            5799999999999999999999999999988764 446667777776653 344444                 456999


Q ss_pred             HHHHHHHHHHHHhcCCCccEEEEccccCC--CCCCCCHHHH--------------HHhhhhhhhhhhhhcc
Q 044688           92 LASVRKFASDFTTKGLPLNILINNAGIMA--SPFMLSKDNI--------------ELQFATNHLGSLHLHM  146 (147)
Q Consensus        92 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~--~~~~~~~~~~--------------~~~~~~N~~g~~~l~~  146 (147)
                      .++++++++++.+++|+||+||||||+..  +..+.+.++|              ...|.+|+.++++++|
T Consensus        82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  152 (284)
T d1e7wa_          82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  152 (284)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeec
Confidence            99999999999999999999999999864  2334444443              3578999999998765

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.84  E-value=3.5e-21  Score=131.36  Aligned_cols=110  Identities=17%  Similarity=0.214  Sum_probs=94.5

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ..+++||+++|||+++|||+++++.|+++|++|++++|+.++.+++.+.+...   .++....+|+++.+++.+++    
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~----   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAV----   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHT----
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc---cchhhhhhhcccHHHHHHHh----
Confidence            45799999999999999999999999999999999999998888888887764   34556889999999887764    


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                         +++|+||||||+.  ....+.++|+..+++|+.+.+++.
T Consensus        91 ---~~iDilin~Ag~g--~~~~~~e~~~~~~~~nv~~~~~~~  127 (191)
T d1luaa1          91 ---KGAHFVFTAGAIG--LELLPQAAWQNESSIEIVADYNAQ  127 (191)
T ss_dssp             ---TTCSEEEECCCTT--CCCBCHHHHHTCTTCCEEEECCCS
T ss_pred             ---cCcCeeeecCccc--cccCCHHHHHhhhcceeehhHhhH
Confidence               4799999999964  346789999999999998877654

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.81  E-value=2.3e-19  Score=128.03  Aligned_cols=92  Identities=14%  Similarity=0.161  Sum_probs=80.3

Q ss_pred             CCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .|+||++||||++|  |||+++|++|+++|++|++++|+++ .++..+++.+.  +....+..+|+++.+++.++++++.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~--~~~~~~~~~d~~~~~~~~~~~~~~~   78 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE--LNSPYVYELDVSKEEHFKSLYNSVK   78 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhh--CCceeEeeecccchhhHHHHHHHHH
Confidence            48999999999765  9999999999999999999999854 45556666665  4567788999999999999999999


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                      +++|++|++|||+|...
T Consensus        79 ~~~g~id~lV~nag~~~   95 (274)
T d2pd4a1          79 KDLGSLDFIVHSVAFAP   95 (274)
T ss_dssp             HHTSCEEEEEECCCCCC
T ss_pred             HHcCCCCeEEeeccccc
Confidence            99999999999999763

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.79  E-value=7.4e-19  Score=124.89  Aligned_cols=116  Identities=19%  Similarity=0.239  Sum_probs=94.8

Q ss_pred             CCCCCEEEEecC--CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGA--SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~--~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .|+||++||||+  ++|||+++|++|+++|++|++++|+.++.   .+.+.+.. +.+...+.||+++++++.++++.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~---~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~   78 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDRL-PAKAPLLELDVQNEEHLASLAGRVT   78 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHH---HHHHHHHc-CCceeeEeeecccccccccccchhh
Confidence            489999999995  57999999999999999999999986543   34444443 5678889999999999999988886


Q ss_pred             hc---CCCccEEEEccccCC-------CCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          104 TK---GLPLNILINNAGIMA-------SPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       104 ~~---~~~id~lv~~ag~~~-------~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +.   ++.+|++|||+|+..       +..+.+.+++...+.+|+.+.+...
T Consensus        79 ~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (268)
T d2h7ma1          79 EAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMA  130 (268)
T ss_dssp             HHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             hccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHH
Confidence            54   578999999999752       2236788999999999998887654

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.79  E-value=2.3e-19  Score=125.72  Aligned_cols=106  Identities=13%  Similarity=0.056  Sum_probs=84.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh--cC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT--KG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~  106 (147)
                      .+++||||+++|||+++|++|+++|++|++++|+++..            ......+.+|+.+.+......+.+..  ++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ------------ADSNILVDGNKNWTEQEQSILEQTASSLQG   69 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT------------SSEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc------------ccccceeccccCchhHHHHHHHHHHHHhcC
Confidence            35679999999999999999999999999999986431            23445567788877777766666655  57


Q ss_pred             CCccEEEEccccCC--C-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          107 LPLNILINNAGIMA--S-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       107 ~~id~lv~~ag~~~--~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ++||+||||||...  . ..+.+.+.|+.++++|+.++++++|
T Consensus        70 g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  112 (235)
T d1ooea_          70 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK  112 (235)
T ss_dssp             CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhh
Confidence            89999999999743  2 3345568899999999999998875

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.79  E-value=9e-20  Score=133.66  Aligned_cols=119  Identities=13%  Similarity=0.140  Sum_probs=91.4

Q ss_pred             CCCEEEEec--CCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC----------CCeeEEEE---------
Q 044688           28 TGLTAIVTG--ASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP----------TAKVDVLE---------   86 (147)
Q Consensus        28 ~~~~~litG--~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~----------~~~~~~~~---------   86 (147)
                      .+|++||||  +++|||+++|+.|+++|++|++++++..............+.          ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            379999999  558999999999999999999999876543333332221110          01122233         


Q ss_pred             -----------ecCCCHHHHHHHHHHHHhcCCCccEEEEccccCC----CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           87 -----------LDLSSLASVRKFASDFTTKGLPLNILINNAGIMA----SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        87 -----------~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                                 +|+++.++++++++++.++||+||++|||+|...    +..+.+.++|++.|++|++|+++++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k  155 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCK  155 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHH
Confidence                       3667888899999999999999999999999753    34578999999999999999998875

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.78  E-value=3.1e-19  Score=125.18  Aligned_cols=107  Identities=11%  Similarity=0.057  Sum_probs=87.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc--
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK--  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--  105 (147)
                      +||++||||+++|||+++|+.|+++|++|++++++....            ........+|.++.++.+.+...+.+.  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   68 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE------------ASASVIVKMTDSFTEQADQVTAEVGKLLG   68 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT------------SSEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc------------ccccceeecccCcHHHHHHHHHHHHHHhC
Confidence            589999999999999999999999999999999875421            234556678888888888887777665  


Q ss_pred             CCCccEEEEccccCC--C-CCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          106 GLPLNILINNAGIMA--S-PFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       106 ~~~id~lv~~ag~~~--~-~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+++|+||||||...  . ..+.+.++|++.|++|+.+++++++
T Consensus        69 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  112 (236)
T d1dhra_          69 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH  112 (236)
T ss_dssp             TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHH
Confidence            357999999999642  2 3356678899999999999998875

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=2.2e-18  Score=121.93  Aligned_cols=118  Identities=13%  Similarity=0.186  Sum_probs=97.8

Q ss_pred             CCCCCEEEEecCCC--chhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASS--GIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~--giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .|+||++||||+++  |||+++|+.|+++|++|++++|+++..+.+ +++...  ..+.....+|+++..++...++++.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   78 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQ--LGSDIVLQCDVAEDASIDTMFAELG   78 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHH--TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhh--cCCcceeecccchHHHHHHHHHHhh
Confidence            47899999999998  899999999999999999999986544444 444444  3567788999999999999999999


Q ss_pred             hcCCCccEEEEccccCCCC-------CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASP-------FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~-------~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      ..++.+|++|||++.....       .....+.+...+++|+.+.+.+++
T Consensus        79 ~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (258)
T d1qsga_          79 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAK  128 (258)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             hcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999875311       135667789999999999887754

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.77  E-value=1.8e-18  Score=122.62  Aligned_cols=114  Identities=18%  Similarity=0.179  Sum_probs=88.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-chHHHHHHHhhCCCCeeEEEEecCC----CHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLS----SLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~----~~~~~~~~~~~~~~  104 (147)
                      .++||||+++|||+++|++|+++|++|++++|+.++ .+++.+++.+.. +.+.....+|..    ..+.+.++++++.+
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR   80 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999998665 466777777765 456666666554    36677888888999


Q ss_pred             cCCCccEEEEccccCCCCC-------------CCCHHHHHHhhhhhhhhhhhh
Q 044688          105 KGLPLNILINNAGIMASPF-------------MLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~-------------~~~~~~~~~~~~~N~~g~~~l  144 (147)
                      ++|++|++|||||+..+..             +...+.+...+..|+.+.+..
T Consensus        81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (266)
T d1mxha_          81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFL  133 (266)
T ss_dssp             HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHH
T ss_pred             HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccch
Confidence            9999999999999864221             122345666777787776654

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.62  E-value=2.1e-15  Score=105.14  Aligned_cols=103  Identities=20%  Similarity=0.242  Sum_probs=83.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|++||||+++|||+++|++|+++|++|++++|+.+              +.+.....+|+++......+......... 
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~--------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-   65 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE--------------GEDLIYVEGDVTREEDVRRAVARAQEEAP-   65 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC--------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC-
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc--------------cccceEeeccccchhhhHHHHHhhhcccc-
Confidence            389999999999999999999999999999999864              34567889999999999998888766654 


Q ss_pred             ccEEEEccccCC------CCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMA------SPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~------~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      .+.++++++...      .....+.+.+++.+++|+.+++.+++
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  109 (241)
T d1uaya_          66 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR  109 (241)
T ss_dssp             EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHH
Confidence            455556655431      23356788999999999999887654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.3e-15  Score=112.01  Aligned_cols=108  Identities=17%  Similarity=0.167  Sum_probs=79.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-----cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-----AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |+||||||+|.||..++++|++.|+.|++++|...     +.+.+..+....  ..++.++.+|++|.+++.++++..  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~--   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTC--NPKFHLHYGDLSDTSNLTRILREV--   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-----------------------CCEEECCCCSSCHHHHHHHHHHH--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhc--CCCeEEEEeecCCHHHHHHHHhcc--
Confidence            78999999999999999999999999999998532     222222222222  457899999999999999999876  


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         .+|+++|+|+....  ..+.++....+++|+.|+.++++
T Consensus        78 ---~~d~v~h~aa~~~~--~~~~~~~~~~~~~Nv~gt~nlle  114 (357)
T d1db3a_          78 ---QPDEVYNLGAMSHV--AVSFESPEYTADVDAMGTLRLLE  114 (357)
T ss_dssp             ---CCSEEEECCCCCTT--TTTTSCHHHHHHHHTHHHHHHHH
T ss_pred             ---CCCEEEEeeccccc--chhhhCHHHHHHHHHHHHHHHHH
Confidence               79999999997642  23345566789999999987753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.56  E-value=5.7e-15  Score=107.70  Aligned_cols=108  Identities=23%  Similarity=0.201  Sum_probs=83.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||||+|.||..+++.|++.|++|++++|-............... ..++.++.+|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhc-CCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            49999999999999999999999999999875443333333332221 457889999999999999988865     699


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|||+|+...  ...+.++....+++|+.|+.++++
T Consensus        76 ~ViHlAa~~~--~~~~~~~~~~~~~~Nv~gt~nlL~  109 (338)
T d1udca_          76 TVIHFAGLKA--VGESVQKPLEYYDNNVNGTLRLIS  109 (338)
T ss_dssp             EEEECCSCCC--HHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCccc--hhhHHhCHHHHHHhHHHHHHHHHH
Confidence            9999998542  223334566789999999988764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=1.4e-14  Score=107.44  Aligned_cols=112  Identities=14%  Similarity=0.164  Sum_probs=85.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc----------------CccchHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN----------------MAAGTDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~----------------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      |+++||||++|.||.+++++|++.|++|++++.-                .....+......... +.++.++.+|++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~Dl~d~   79 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT-GKSIELYVGDICDF   79 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH-CCCCEEEESCTTSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhc-CCCcEEEEccCCCH
Confidence            6899999999999999999999999999998620                011122222222221 45789999999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCC-CCCCHHHHHHhhhhhhhhhhhhcc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMASP-FMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +.+.++++..     .+|+|+|.|+..... ...+++.....+++|+.|+.++++
T Consensus        80 ~~l~~~~~~~-----~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~  129 (393)
T d1i24a_          80 EFLAESFKSF-----EPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLF  129 (393)
T ss_dssp             HHHHHHHHHH-----CCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhh-----cchheeccccccccccccccccccccccccccccccHHHH
Confidence            9999999876     799999999875322 245667778889999999988753

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.55  E-value=1.9e-14  Score=101.14  Aligned_cols=91  Identities=23%  Similarity=0.295  Sum_probs=71.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc-CCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK-GLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~  108 (147)
                      |++||||+++|||+++|++|+++|++|++++|+.++                   ..+|+.+.+.......+...+ .+.
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-------------------~~~d~~~~~~~~~~~~~~~~~~~~~   62 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-------------------VIADLSTAEGRKQAIADVLAKCSKG   62 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-------------------EECCTTSHHHHHHHHHHHHTTCTTC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-------------------HHHHhcCHHHHHHHHHHHHHHhCCC
Confidence            799999999999999999999999999999997532                   146888888888777666655 467


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhh
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l  144 (147)
                      +|++|||||+...     .+.+...+.+|..+...+
T Consensus        63 id~lv~~Ag~~~~-----~~~~~~~~~~~~~~~~~~   93 (257)
T d1fjha_          63 MDGLVLCAGLGPQ-----TKVLGNVVSVNYFGATEL   93 (257)
T ss_dssp             CSEEEECCCCCTT-----CSSHHHHHHHHTHHHHHH
T ss_pred             CcEEEEcCCCCCc-----HHHHHHHHHHHHHHHHHH
Confidence            9999999997532     234566677777766543

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.54  E-value=9.7e-15  Score=106.61  Aligned_cols=109  Identities=17%  Similarity=0.078  Sum_probs=88.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+||++|||||+|.||..+++.|++.|++|++++|+......+.+..+.   ...+.++.+|++|++.+.++++..    
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~---~~~i~~~~~Dl~d~~~l~~~~~~~----   78 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREF----   78 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHH----
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhc---ccCCeEEEeeccChHhhhhhhhhc----
Confidence            5789999999999999999999999999999999987766655543322   246889999999999999988876    


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                       .+|+++|.|+...  ...+.+..+..+++|+.|+.+++
T Consensus        79 -~~~~v~~~aa~~~--~~~~~~~~~~~~~~Nv~g~~n~l  114 (356)
T d1rkxa_          79 -QPEIVFHMAAQPL--VRLSYSEPVETYSTNVMGTVYLL  114 (356)
T ss_dssp             -CCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHH
T ss_pred             -hhhhhhhhhcccc--ccccccCCccccccccccchhhh
Confidence             7999999998642  22334556778899999887765

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.52  E-value=3.5e-14  Score=102.58  Aligned_cols=106  Identities=18%  Similarity=0.225  Sum_probs=81.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++|||||+|.||..++++|+++|++|+++++-. ....+....+..   ..++.++.+|+++.+.+.++++..     .+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~---~~~~~~i~~Di~~~~~l~~~~~~~-----~~   73 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS---LGNFEFVHGDIRNKNDVTRLITKY-----MP   73 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc---cCCcEEEEcccCCHHHHHHHHHhc-----CC
Confidence            589999999999999999999999999987532 222222333332   357889999999999999998876     69


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+|+....  ....++....+++|+.|+.++++
T Consensus        74 d~Vih~aa~~~~--~~~~~~~~~~~~~Nv~gt~nll~  108 (338)
T d1orra_          74 DSCFHLAGQVAM--TTSIDNPCMDFEINVGGTLNLLE  108 (338)
T ss_dssp             SEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             ceEEeecccccc--cccccChHHHHHHHHHHHHHHHH
Confidence            999999986421  22334557889999999988754

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.50  E-value=2.8e-14  Score=104.25  Aligned_cols=109  Identities=21%  Similarity=0.211  Sum_probs=80.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |++|||||+|.||..++++|++.|++|+++++......+......... ..++.++.+|++|.+.+..+++..     ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhc-ccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            789999999999999999999999999999864332222222222111 457888999999999999988764     79


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+|+...  .....+.......+|+.|+.++++
T Consensus        76 d~VihlAa~~~--~~~~~~~~~~~~~~N~~~t~~ll~  110 (347)
T d1z45a2          76 DSVIHFAGLKA--VGESTQIPLRYYHNNILGTVVLLE  110 (347)
T ss_dssp             CEEEECCSCCC--HHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEcccccc--ccccccCcccccccchhhhHHHHH
Confidence            99999999652  112234446678899999888753

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=1.3e-13  Score=99.82  Aligned_cols=108  Identities=19%  Similarity=0.141  Sum_probs=78.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc-----cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA-----AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~-----~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .|++|||||+|.||..+++.|++.|++|+.++|...     +...+....... ....+.+..+|+++.+.+.+.++.. 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Di~~~~~~~~~~~~~-   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNV-NKALMKLHYADLTDASSLRRWIDVI-   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------CCEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhc-cccceEEEEccccCHHHHHHHHhhh-
Confidence            389999999999999999999999999999998532     222222211111 1357889999999999999988875 


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhh
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHL  144 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l  144 (147)
                          ++|+|||+|+...  ...+.+.....++.|+.++..+
T Consensus        79 ----~~D~Vih~Aa~~~--~~~~~~~p~~~~~~n~~~~~~~  113 (339)
T d1n7ha_          79 ----KPDEVYNLAAQSH--VAVSFEIPDYTADVVATGALRL  113 (339)
T ss_dssp             ----CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHH
T ss_pred             ----ccchhhhcccccc--ccccccCccccccccccccchh
Confidence                8999999998642  1223344556777887777654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.3e-13  Score=99.08  Aligned_cols=109  Identities=17%  Similarity=0.165  Sum_probs=81.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc------CccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRN------MAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~------~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      |++|||||+|.||.+++++|++.|+.|+.+++.      .....+....+.... ..++.++.+|++|.+.+.+++... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhc-CCCcEEEEeecccccccccccccc-
Confidence            789999999999999999999999999998742      222222233222221 467899999999999999888763 


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          .+++++|.|+..+  ...+.++....+++|+.|+.++.+
T Consensus        81 ----~~~~i~h~Aa~~~--~~~~~~~p~~~~~~Nv~gt~~l~~  117 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKA--VGESVQKPLDYYRVNLTGTIQLLE  117 (346)
T ss_dssp             ----CEEEEEECCSCCC--HHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             ----ccccccccccccC--cHhhHhCHHHHHHhhhcccccccc
Confidence                7899999999753  122334456788999999877653

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=4.5e-13  Score=97.37  Aligned_cols=108  Identities=18%  Similarity=0.150  Sum_probs=78.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-----chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-----GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |+||||||+|.||..++++|++.|++|+.++|....     .+.+....... ...++.++.+|++|.+.+.+++...  
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAH-IEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC----------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhh-ccCCcEEEEeecCCchhhHHHHhhc--
Confidence            445999999999999999999999999999996432     22222222211 1357899999999999999999876  


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                         .+++++|.++...  ...+.+.....+++|+.|+.++.
T Consensus        79 ---~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll  114 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSH--VKISFDLAEYTADVDGVGTLRLL  114 (347)
T ss_dssp             ---CCSEEEECCSCCC--HHHHHHSHHHHHHHHTHHHHHHH
T ss_pred             ---ccceeeeeeeccc--cchhhccchhhhhhHHHHHHHHH
Confidence               7889999988542  22233445567899999987764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.38  E-value=6.4e-13  Score=95.57  Aligned_cols=106  Identities=19%  Similarity=0.097  Sum_probs=79.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-hHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-TDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      |+|||||++|.||..++++|+++|++|+.++|..... ....+.+.   ...++.++.+|++|.+.+.+.+...     .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   72 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG---IEGDIQYEDGDMADACSVQRAVIKA-----Q   72 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT---CGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc---ccCCcEEEEccccChHHhhhhhccc-----c
Confidence            7899999999999999999999999999999865432 22222222   1357899999999999999988876     6


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .++++|+++....  ....+.....++.|+.|+.+++
T Consensus        73 ~~~~~~~a~~~~~--~~~~~~~~~~~~~n~~g~~~~l  107 (321)
T d1rpna_          73 PQEVYNLAAQSFV--GASWNQPVTTGVVDGLGVTHLL  107 (321)
T ss_dssp             CSEEEECCSCCCH--HHHTTSHHHHHHHHTHHHHHHH
T ss_pred             ccccccccccccc--cccccchHHHHhhhhhchHHHH
Confidence            7888888875421  1112334567888988888764

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.38  E-value=3.2e-13  Score=98.42  Aligned_cols=107  Identities=14%  Similarity=0.108  Sum_probs=80.1

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..||+|||||++|.||..++++|+++|++|+++.|+.+....+...............+..|+.+.+.+..++.      
T Consensus         9 ~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   82 (342)
T d1y1pa1           9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK------   82 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT------
T ss_pred             CCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc------
Confidence            46899999999999999999999999999999999876655554433333334455667789999887766553      


Q ss_pred             CCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          107 LPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       107 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                       .+|.++|+++...  ...++   ...+..|+.|+.+++
T Consensus        83 -~~~~v~~~a~~~~--~~~~~---~~~~~~nv~gt~~ll  115 (342)
T d1y1pa1          83 -GAAGVAHIASVVS--FSNKY---DEVVTPAIGGTLNAL  115 (342)
T ss_dssp             -TCSEEEECCCCCS--CCSCH---HHHHHHHHHHHHHHH
T ss_pred             -cchhhhhhccccc--ccccc---cccccchhhhHHHHH
Confidence             6899999998643  22233   446778888887765

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.38  E-value=2.1e-13  Score=100.27  Aligned_cols=106  Identities=13%  Similarity=0.135  Sum_probs=77.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEE-EEccCcc-chHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFM-AVRNMAA-GTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~-~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++|||||+|.||..++++|++.|+.+++ +++.... ..+.   +.......++.++.+|++|.+.+.++++..     .
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~   73 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLES---LSDISESNRYNFEHADICDSAEITRIFEQY-----Q   73 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGG---GTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHH---HHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----C
Confidence            5899999999999999999999987544 4442211 1111   112222457899999999999999998876     7


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+|+...  ...+.++....+++|+.|+.++.+
T Consensus        74 ~d~VihlAa~~~--~~~~~~~p~~~~~~N~~gt~nl~~  109 (361)
T d1kewa_          74 PDAVMHLAAESH--VDRSITGPAAFIETNIVGTYALLE  109 (361)
T ss_dssp             CSEEEECCSCCC--HHHHHHCTHHHHHHHTHHHHHHHH
T ss_pred             CCEEEECccccc--hhhHHhCHHHHHHHHHHHHHHHHH
Confidence            999999998642  122334456689999999887653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=1.3e-12  Score=88.90  Aligned_cols=79  Identities=19%  Similarity=0.111  Sum_probs=65.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      |..|+++||||+|.||.+++++|+++|++|.++.|++++.....        ...+.++.+|++|.+++.+++.      
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~gD~~d~~~l~~al~------   66 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG--------PRPAHVVVGDVLQAADVDKTVA------   66 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS--------CCCSEEEESCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc--------ccccccccccccchhhHHHHhc------
Confidence            35688999999999999999999999999999999877643221        3457789999999998877765      


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                       ..|++|+++|...
T Consensus        67 -~~d~vi~~~g~~~   79 (205)
T d1hdoa_          67 -GQDAVIVLLGTRN   79 (205)
T ss_dssp             -TCSEEEECCCCTT
T ss_pred             -CCCEEEEEeccCC
Confidence             6899999998753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.30  E-value=1.6e-12  Score=94.34  Aligned_cols=101  Identities=14%  Similarity=0.113  Sum_probs=75.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++|||||+|.||..++++|+++| .+|+.+++..........       ..++.++.+|+++.+.+.+.+..      .+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~-------~~~~~~i~~Di~~~~~~~~~~~~------~~   68 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN-------HPHFHFVEGDISIHSEWIEYHVK------KC   68 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT-------CTTEEEEECCTTTCSHHHHHHHH------HC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhcc-------CCCeEEEECccCChHHHHHHHHh------CC
Confidence            58999999999999999999999 589998876544332221       45789999999987766553332      49


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      |+|||+|+....  ....+.....+.+|+.|+.++++
T Consensus        69 d~Vih~a~~~~~--~~~~~~~~~~~~~nv~gt~~ll~  103 (342)
T d2blla1          69 DVVLPLVAIATP--IEYTRNPLRVFELDFEENLRIIR  103 (342)
T ss_dssp             SEEEECBCCCCH--HHHHHSHHHHHHHHTHHHHHHHH
T ss_pred             Cccccccccccc--cccccCCcccccccccccccccc
Confidence            999999997531  12234445789999999988753

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.22  E-value=3.2e-12  Score=93.08  Aligned_cols=104  Identities=19%  Similarity=0.164  Sum_probs=73.6

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC---ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM---AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~---~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -|.||||||+|.||..++++|++.|+.|.++.++.   ......   +... .+.++.++.+|++|.+.+..++.     
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~---~~~~-~~~~i~~~~~Di~d~~~~~~~~~-----   72 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKAN---LEAI-LGDRVELVVGDIADAELVDKLAA-----   72 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGG---TGGG-CSSSEEEEECCTTCHHHHHHHHT-----
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHH---HHHh-hcCCeEEEEccCCCHHHHHHHHh-----
Confidence            37899999999999999999999998655554431   111111   1111 14578999999999998887765     


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                        ..|.++|.|+....  ....++....+++|+.|+.+++
T Consensus        73 --~~~~v~~~a~~~~~--~~~~~~~~~~~~~N~~g~~nll  108 (346)
T d1oc2a_          73 --KADAIVHYAAESHN--DNSLNDPSPFIHTNFIGTYTLL  108 (346)
T ss_dssp             --TCSEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHH
T ss_pred             --hhhhhhhhhhcccc--cchhhCcccceeeehHhHHhhh
Confidence              57889999876431  1223344567899999988875

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.21  E-value=2.9e-11  Score=87.64  Aligned_cols=111  Identities=15%  Similarity=0.115  Sum_probs=80.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC---CCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP---TAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+.|++|||||+|.||..++++|.+.|++|++++|...........++....   ..++.++.+|..|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            4668999999999999999999999999999998743322222222222110   2468889999999887654433   


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                          ..+.++|.++...  ...+.++....+++|+.|+.++.+
T Consensus        91 ----~~~~v~~~~a~~~--~~~~~~~~~~~~~~Nv~gt~~ll~  127 (341)
T d1sb8a_          91 ----GVDYVLHQAALGS--VPRSINDPITSNATNIDGFLNMLI  127 (341)
T ss_dssp             ----TCSEEEECCSCCC--HHHHHHCHHHHHHHHTHHHHHHHH
T ss_pred             ----ccccccccccccc--ccccccCccchhheeehhHHHHHH
Confidence                6888888887542  122456677799999999988753

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.21  E-value=3.8e-11  Score=88.41  Aligned_cols=111  Identities=14%  Similarity=0.152  Sum_probs=77.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEc---------cCccchHHHHHHHhhC------CCCeeEEEEecCCCH
Q 044688           29 GLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVR---------NMAAGTDVKDAIVKEI------PTAKVDVLELDLSSL   92 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r---------~~~~~~~~~~~l~~~~------~~~~~~~~~~D~~~~   92 (147)
                      +.+||||||+|.||..++++|++ .|++|+++++         ..+..++....+....      ....+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            34699999999999999999996 6899999874         1122233333332211      124688899999999


Q ss_pred             HHHHHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688           93 ASVRKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus        93 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +.+.++++..    .++|+|+|.|+....  ....+.....+++|+.++.+++
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~--~~~~~~~~~~~~~N~~~t~~~l  128 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLL  128 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHH
T ss_pred             HHhhhhhhcc----ceeehhhcccccccc--cccccccccccccccccccccc
Confidence            9988887653    578999999986531  1223344567788888877664

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.5e-12  Score=89.09  Aligned_cols=103  Identities=14%  Similarity=0.059  Sum_probs=72.5

Q ss_pred             cCCCCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           23 QGIDATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        23 ~~~~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.+.|++|++|||||||.||..++++|+++|.  +|++++|++.......        ...+....+|+.+.+++...  
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~--------~~~i~~~~~D~~~~~~~~~~--   77 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASA--   77 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGG--
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc--------cceeeeeeeccccccccccc--
Confidence            34557889999999999999999999999995  8999999765432211        23566667788776655433  


Q ss_pred             HHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          101 DFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                           +..+|++||++|...     .........++|+.++..++
T Consensus        78 -----~~~~d~vi~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  112 (232)
T d2bkaa1          78 -----FQGHDVGFCCLGTTR-----GKAGAEGFVRVDRDYVLKSA  112 (232)
T ss_dssp             -----GSSCSEEEECCCCCH-----HHHHHHHHHHHHTHHHHHHH
T ss_pred             -----ccccccccccccccc-----cccchhhhhhhcccccceee
Confidence                 347999999998531     22334455667777766554

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.14  E-value=2.8e-11  Score=82.70  Aligned_cols=74  Identities=22%  Similarity=0.198  Sum_probs=58.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCE--EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVH--VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~--v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++||||||+|.||.+++++|+++|+.  |+...|++++.    ..+     ..++.++.+|+++.+++.++++       
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~----~~~-----~~~~~~~~~d~~~~~~~~~~~~-------   67 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK----EKI-----GGEADVFIGDITDADSINPAFQ-------   67 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHH----HHT-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHH----Hhc-----cCCcEEEEeeeccccccccccc-------
Confidence            78999999999999999999999965  55566664321    111     3467788999999998887765       


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      .+|.+||+++..
T Consensus        68 ~~d~vi~~a~~~   79 (252)
T d2q46a1          68 GIDALVILTSAV   79 (252)
T ss_dssp             TCSEEEECCCCC
T ss_pred             cceeeEEEEeec
Confidence            689999999864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.12  E-value=4.8e-11  Score=87.11  Aligned_cols=102  Identities=18%  Similarity=0.161  Sum_probs=73.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++.++|||||+|.||..++++|+++|++|+++++......      ...  .....+..+|+.+.+.+.++++       
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~--~~~~~~~~~D~~~~~~~~~~~~-------   78 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TED--MFCDEFHLVDLRVMENCLKVTE-------   78 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGG--GTCSEEEECCTTSHHHHHHHHT-------
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhh--cccCcEEEeechhHHHHHHHhh-------
Confidence            6677999999999999999999999999999987543211      000  1234567789999887766554       


Q ss_pred             CccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          108 PLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       108 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+|.+||.|+.... ...+.+.....+..|+.++.+++
T Consensus        79 ~~d~Vih~a~~~~~-~~~~~~~~~~~~~~n~~gt~~ll  115 (363)
T d2c5aa1          79 GVDHVFNLAADMGG-MGFIQSNHSVIMYNNTMISFNMI  115 (363)
T ss_dssp             TCSEEEECCCCCCC-HHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             cCCeEeeccccccc-ccccccccccccccccchhhHHH
Confidence            68999999986532 11223345667888888877664

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=5.1e-11  Score=85.63  Aligned_cols=101  Identities=15%  Similarity=0.171  Sum_probs=67.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|++|||||+|.||+.++++|++.|++|+++++......+......   ...++.....|+.+.            .+..
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~------------~~~~   65 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI---GHENFELINHDVVEP------------LYIE   65 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT---TCTTEEEEECCTTSC------------CCCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc---CCCceEEEehHHHHH------------HHcC
Confidence            3789999999999999999999999999999874322221111111   123455555555322            1236


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                      +|+|||+|+.....  .+.++....+++|+.|+.++++
T Consensus        66 ~d~VihlAa~~~~~--~~~~~~~~~~~~Nv~g~~~ll~  101 (312)
T d2b69a1          66 VDQIYHLASPASPP--NYMYNPIKTLKTNTIGTLNMLG  101 (312)
T ss_dssp             CSEEEECCSCCSHH--HHTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEECcccCCch--hHHhCHHHHHHHHHHHHHHHHH
Confidence            99999999865311  1123455688999999988764

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.08  E-value=8.1e-11  Score=84.20  Aligned_cols=89  Identities=15%  Similarity=0.132  Sum_probs=68.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|++||||++|.||.+++++|++.|+.++++++..                      .+|+.+.+.+.+++..-     .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------------~~~~~~~~~~~~~~~~~-----~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASE-----R   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHH-----C
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------------hccccCHHHHHHHHhhc-----C
Confidence            47899999999999999999999999887655321                      25899999998888754     6


Q ss_pred             ccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          109 LNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       109 id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +|.++|+|+..+. ...........+++|+.|+.+++
T Consensus        55 ~d~v~~~a~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll   90 (315)
T d1e6ua_          55 IDQVYLAAAKVGG-IVANNTYPADFIYQNMMIESNII   90 (315)
T ss_dssp             CSEEEECCCCCCC-HHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEcchhccc-cccchhhHHHHHHHHHHHHHHHH
Confidence            9999999976431 11233445567888999988765

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.06  E-value=9.4e-11  Score=82.27  Aligned_cols=84  Identities=25%  Similarity=0.388  Sum_probs=63.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      .++|||||+|.||..++++|.++|++|+.++|+.                       +|++|.+++.++++..     .+
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------------~D~~d~~~~~~~l~~~-----~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------------LDITNVLAVNKFFNEK-----KP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------------CCTTCHHHHHHHHHHH-----CC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------------ccCCCHHHHHHHHHHc-----CC
Confidence            3599999999999999999999999999988751                       4899999999988876     78


Q ss_pred             cEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhh
Q 044688          110 NILINNAGIMASPFMLSKDNIELQFATNHLGSLH  143 (147)
Q Consensus       110 d~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~  143 (147)
                      |+|||+|+...  .+.+....+..+..|+.....
T Consensus        54 d~vih~a~~~~--~~~~~~~~~~~~~~n~~~~~~   85 (281)
T d1vl0a_          54 NVVINCAAHTA--VDKCEEQYDLAYKINAIGPKN   85 (281)
T ss_dssp             SEEEECCCCCC--HHHHHHCHHHHHHHHTHHHHH
T ss_pred             CEEEeeccccc--cccccccchhhcccccccccc
Confidence            99999998643  112223334455566555443

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.04  E-value=4.6e-11  Score=84.35  Aligned_cols=88  Identities=18%  Similarity=0.155  Sum_probs=64.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      ++|||||+|.||.++++.|.+.|. ++.+++....                   +..|++|.+.+.++++..     .+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-------------------~~~Dl~~~~~~~~~i~~~-----~~D   56 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-------------------FCGDFSNPKGVAETVRKL-----RPD   56 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-------------------SCCCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-------------------ccCcCCCHHHHHHHHHHc-----CCC
Confidence            489999999999999999999885 4444443221                   236999999999999876     799


Q ss_pred             EEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          111 ILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       111 ~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      +|||+||....  ..+.+.....+++|+.++..+.
T Consensus        57 ~Vih~Aa~~~~--~~~~~~~~~~~~~n~~~~~~l~   89 (298)
T d1n2sa_          57 VIVNAAAHTAV--DKAESEPELAQLLNATSVEAIA   89 (298)
T ss_dssp             EEEECCCCCCH--HHHTTCHHHHHHHHTHHHHHHH
T ss_pred             EEEEecccccc--cccccCccccccccccccccch
Confidence            99999996531  1122334557788887776654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.03  E-value=3.6e-10  Score=79.99  Aligned_cols=83  Identities=10%  Similarity=0.093  Sum_probs=62.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH-HHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV-KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~-~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+++|||||+|.||..++++|+++|++|+++.|+....... ...+... ....+.++.+|++|.+.+.+.+.       
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~-~~~~v~~v~~d~~d~~~~~~~~~-------   74 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALK-------   74 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh-ccCCcEEEEeecccchhhhhhcc-------
Confidence            35699999999999999999999999999999976543211 1222111 13468889999999998877665       


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      ..+.++++++..
T Consensus        75 ~~~~~~~~~~~~   86 (312)
T d1qyda_          75 QVDVVISALAGG   86 (312)
T ss_dssp             TCSEEEECCCCS
T ss_pred             Ccchhhhhhhhc
Confidence            678888887654

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=98.94  E-value=2.8e-09  Score=74.77  Aligned_cols=83  Identities=16%  Similarity=0.251  Sum_probs=63.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH--HHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV--KDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~--~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|++|||||+|.||.+++++|++.|++|++++|+.......  ...+.... ...+.++.+|+.+.....+.++      
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhh------
Confidence            57899999999999999999999999999999976543222  22222221 3457788999999988877765      


Q ss_pred             CCccEEEEccccC
Q 044688          107 LPLNILINNAGIM  119 (147)
Q Consensus       107 ~~id~lv~~ag~~  119 (147)
                       ..+.++++++..
T Consensus        76 -~~~~vi~~~~~~   87 (307)
T d1qyca_          76 -NVDVVISTVGSL   87 (307)
T ss_dssp             -TCSEEEECCCGG
T ss_pred             -hceeeeeccccc
Confidence             578888888753

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.83  E-value=1.8e-09  Score=77.47  Aligned_cols=104  Identities=15%  Similarity=0.092  Sum_probs=69.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCE------EEEEEccC-ccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVH------VFMAVRNM-AAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~------v~~~~r~~-~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++||||++|.||..++++|+++|+.      ++..+... .........+   ....++.++..|.++........    
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~----   74 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV---DADPRLRFVHGDIRDAGLLAREL----   74 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG---TTCTTEEEEECCTTCHHHHHHHT----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh---hcCCCeEEEEeccccchhhhccc----
Confidence            5899999999999999999999864      44444321 1111111111   11457889999999988666433    


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhcc
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLHM  146 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  146 (147)
                         ..+|.++|+|+...  .....+.....+++|+.|+.++.+
T Consensus        75 ---~~~d~vi~~a~~~~--~~~~~~~~~~~~~~N~~gt~~ll~  112 (322)
T d1r6da_          75 ---RGVDAIVHFAAESH--VDRSIAGASVFTETNVQGTQTLLQ  112 (322)
T ss_dssp             ---TTCCEEEECCSCCC--HHHHHHCCHHHHHHHTHHHHHHHH
T ss_pred             ---cccceEEeeccccc--ccccccchHHHhhhhHHHHHHHHH
Confidence               27899999998642  222334456678899998877653

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=98.80  E-value=1.3e-08  Score=73.65  Aligned_cols=78  Identities=21%  Similarity=0.186  Sum_probs=57.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHH-HHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASV-RKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~  106 (147)
                      +.|+++||||+|.||.+++++|+++|++|+++.|+.++..  ...+..   ...+..+.+|+.|..++ ..++       
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~--~~~~~~---~~~v~~~~gD~~d~~~~~~~a~-------   69 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA---IPNVTLFQGPLLNNVPLMDTLF-------   69 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT---STTEEEEESCCTTCHHHHHHHH-------
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhh--hhhhcc---cCCCEEEEeeCCCcHHHHHHHh-------
Confidence            4689999999999999999999999999999999876532  223332   24578889999886543 3332       


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      ...|.++.+..
T Consensus        70 ~~~~~~~~~~~   80 (350)
T d1xgka_          70 EGAHLAFINTT   80 (350)
T ss_dssp             TTCSEEEECCC
T ss_pred             cCCceEEeecc
Confidence            25676666543

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.57  E-value=1.1e-08  Score=69.17  Aligned_cols=93  Identities=14%  Similarity=0.092  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +.|++|||||||.||..++++|+++|.  +|+...|++...            ..++   ..+..|..++.   +   .-
T Consensus         1 t~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------------~~~~---~~~~~d~~~~~---~---~~   59 (212)
T d2a35a1           1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRL---DNPVGPLAELL---P---QL   59 (212)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTE---ECCBSCHHHHG---G---GC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------------cccc---cccccchhhhh---h---cc
Confidence            358999999999999999999999997  666666653210            1122   33444443321   1   22


Q ss_pred             CCCccEEEEccccCCCCCCCCHHHHHHhhhhhhhhhhhhc
Q 044688          106 GLPLNILINNAGIMASPFMLSKDNIELQFATNHLGSLHLH  145 (147)
Q Consensus       106 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N~~g~~~l~  145 (147)
                      .+.+|.+|+++|.....    ........++|+.++.+++
T Consensus        60 ~~~~d~vi~~~g~~~~~----~~~~~~~~~~~~~~~~~~~   95 (212)
T d2a35a1          60 DGSIDTAFCCLGTTIKE----AGSEEAFRAVDFDLPLAVG   95 (212)
T ss_dssp             CSCCSEEEECCCCCHHH----HSSHHHHHHHHTHHHHHHH
T ss_pred             ccchheeeeeeeeeccc----cccccccccchhhhhhhcc
Confidence            45689999999864211    1112345667777666554

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.56  E-value=3.8e-07  Score=60.33  Aligned_cols=85  Identities=19%  Similarity=0.214  Sum_probs=64.9

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHH---HHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKD---AIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~---~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      ..++++|+++|.|+ ||.+++++..|.+.|. +++++.|+.+..+++..   .+...   ........|..+.+.+....
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~   88 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN---TDCVVTVTDLADQQAFAEAL   88 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH---SSCEEEEEETTCHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh---cCcceEeeecccccchhhhh
Confidence            34689999999999 6899999999999997 78999999876655443   34333   23446678888888776554


Q ss_pred             HHHHhcCCCccEEEEccccC
Q 044688          100 SDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus       100 ~~~~~~~~~id~lv~~ag~~  119 (147)
                      .       ..|++||+..+.
T Consensus        89 ~-------~~diiIN~Tp~G  101 (182)
T d1vi2a1          89 A-------SADILTNGTKVG  101 (182)
T ss_dssp             H-------TCSEEEECSSTT
T ss_pred             c-------ccceeccccCCc
Confidence            4       689999998643

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.54  E-value=6.1e-08  Score=63.88  Aligned_cols=46  Identities=13%  Similarity=0.162  Sum_probs=40.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE   76 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~   76 (147)
                      ++.|+||+|++|+++|+.|++.|++|++++|++++.+++.+++...
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            3667888899999999999999999999999998888888887654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.33  E-value=1.7e-06  Score=56.03  Aligned_cols=88  Identities=15%  Similarity=0.272  Sum_probs=63.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+.++.++|.|+ |++|..+++.|...|+ ++.++.|+.++.+++.+++     +.++       .+.+++.+.+.    
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~-----~~~~-------~~~~~~~~~l~----   83 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-----GGEA-------VRFDELVDHLA----   83 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-----TCEE-------CCGGGHHHHHH----
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh-----hccc-------ccchhHHHHhc----
Confidence            589999999998 9999999999999998 6999999977777666655     3221       12334444444    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhh
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFA  135 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~  135 (147)
                         ..|++|++.+..  ..-.+.+.++..+.
T Consensus        84 ---~~Divi~atss~--~~ii~~~~i~~~~~  109 (159)
T d1gpja2          84 ---RSDVVVSATAAP--HPVIHVDDVREALR  109 (159)
T ss_dssp             ---TCSEEEECCSSS--SCCBCHHHHHHHHH
T ss_pred             ---cCCEEEEecCCC--CccccHhhhHHHHH
Confidence               699999998854  23355666665543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.25  E-value=1.4e-06  Score=57.35  Aligned_cols=80  Identities=15%  Similarity=0.186  Sum_probs=54.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++||+|+++++|...++-....|++|+.+.+++++.+    .+++.  +....+   |-.+.+..+.+.+.  ....
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~----~~~~~--Ga~~vi---~~~~~~~~~~~~~~--~~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIA----YLKQI--GFDAAF---NYKTVNSLEEALKK--ASPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH----HHHHT--TCSEEE---ETTSCSCHHHHHHH--HCTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHH----HHHhh--hhhhhc---ccccccHHHHHHHH--hhcC
Confidence            5899999999999999999999899999999998765432    22222  444333   33333333333332  2234


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ++|+++++.|-
T Consensus        98 Gvd~v~D~vG~  108 (182)
T d1v3va2          98 GYDCYFDNVGG  108 (182)
T ss_dssp             CEEEEEESSCH
T ss_pred             CCceeEEecCc
Confidence            79999999873

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.25  E-value=1.9e-06  Score=55.89  Aligned_cols=74  Identities=16%  Similarity=0.257  Sum_probs=52.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .|.++|.|+ |.+|..+|+.|+++|++|++++|+.++.+++.+.+      ........+..+.......+.       .
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~------~~~~~~~~~~~~~~~~~~~i~-------~   67 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV------QHSTPISLDVNDDAALDAEVA-------K   67 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC------TTEEEEECCTTCHHHHHHHHT-------T
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc------cccccccccccchhhhHhhhh-------c
Confidence            588999987 99999999999999999999999977665554422      233444455555555554443       4


Q ss_pred             ccEEEEcc
Q 044688          109 LNILINNA  116 (147)
Q Consensus       109 id~lv~~a  116 (147)
                      .|.++...
T Consensus        68 ~~~~i~~~   75 (182)
T d1e5qa1          68 HDLVISLI   75 (182)
T ss_dssp             SSEEEECS
T ss_pred             cceeEeec
Confidence            56666544

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.18  E-value=5.2e-06  Score=54.92  Aligned_cols=85  Identities=14%  Similarity=0.156  Sum_probs=55.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh-cCCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT-KGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~  108 (147)
                      .+++++|++|++|...++-....|++|+.+.++.+..++..+.+++.  +....+ ..|-.+.......+.++.. ..++
T Consensus        31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l--Gad~vi-~~~~~~~~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL--GATQVI-TEDQNNSREFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH--TCSEEE-EHHHHHCGGGHHHHHHHHHHHTCC
T ss_pred             EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc--cccEEE-eccccchhHHHHHHHHHHhhccCC
Confidence            34445799999999998888788999999998887777777666665  444332 2221111222333333332 3457


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      +|+++++.|
T Consensus       108 vdvv~D~vg  116 (189)
T d1gu7a2         108 AKLALNCVG  116 (189)
T ss_dssp             EEEEEESSC
T ss_pred             ceEEEECCC
Confidence            999999876

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=4.2e-06  Score=54.54  Aligned_cols=79  Identities=16%  Similarity=0.263  Sum_probs=53.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++||+|++|++|...++.....|++|+.+.+++++.+.+    ++.  +....   .|.++.+..+++.+..  ...
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~--Ga~~v---i~~~~~~~~~~i~~~t--~~~   96 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQN--GAHEV---FNHREVNYIDKIKKYV--GEK   96 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHT--TCSEE---EETTSTTHHHHHHHHH--CTT
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----ccc--Ccccc---cccccccHHHHhhhhh--ccC
Confidence            578999999999999999998888999999998775443322    222  43322   3666655444433322  223


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.++|
T Consensus        97 g~d~v~d~~g  106 (174)
T d1yb5a2          97 GIDIIIEMLA  106 (174)
T ss_dssp             CEEEEEESCH
T ss_pred             CceEEeeccc
Confidence            6899999887

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.14  E-value=2e-06  Score=60.03  Aligned_cols=75  Identities=15%  Similarity=0.210  Sum_probs=45.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH--hcCCC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT--TKGLP  108 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~~~  108 (147)
                      +|||||+|.||..++++|+++|. .|+.+++-.... +... +..    ..    .+|..+.+.   ......  ..+..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~-~~~----~~----~~~~~~~~~---~~~~~~~~~~~~~   68 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVN-LVD----LN----IADYMDKED---FLIQIMAGEEFGD   68 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHH-HHT----SC----CSEEEEHHH---HHHHHHTTCCCSS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhc-ccc----cc----hhhhccchH---HHHHHhhhhcccc
Confidence            79999999999999999999996 687776432211 1111 111    11    122222332   233332  34567


Q ss_pred             ccEEEEccccC
Q 044688          109 LNILINNAGIM  119 (147)
Q Consensus       109 id~lv~~ag~~  119 (147)
                      +++++|.|+..
T Consensus        69 ~~~i~~~aa~~   79 (307)
T d1eq2a_          69 VEAIFHEGACS   79 (307)
T ss_dssp             CCEEEECCSCC
T ss_pred             hhhhhhhcccc
Confidence            89999998754

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=5.6e-06  Score=53.93  Aligned_cols=76  Identities=18%  Similarity=0.327  Sum_probs=56.6

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..++||.++|.|+ ||.+++++..|.+.|.+++++.|+.++.+++.+.+...   ..+..+..|  +.            
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~---~~~~~~~~~--~~------------   75 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT---GSIQALSMD--EL------------   75 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG---SSEEECCSG--GG------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc---ccccccccc--cc------------
Confidence            4678999999997 78999999999999999999999988888777766554   223222221  11            


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                      .....|++||+..+
T Consensus        76 ~~~~~dliIN~Tp~   89 (170)
T d1nyta1          76 EGHEFDLIINATSS   89 (170)
T ss_dssp             TTCCCSEEEECCSC
T ss_pred             cccccceeeccccc
Confidence            12368999999754

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=98.03  E-value=7.1e-06  Score=53.54  Aligned_cols=80  Identities=13%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|+|+++++|...++-....|++|+.+++++++.+.+. ++     +....   .|-++++-.+++ .++ ....
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~l-----Ga~~v---i~~~~~d~~~~v-~~~-t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KA-----GAWQV---INYREEDLVERL-KEI-TGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH-----TCSEE---EETTTSCHHHHH-HHH-TTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hc-----CCeEE---EECCCCCHHHHH-HHH-hCCC
Confidence            4789999999999999999988889999999999876644332 23     44322   366665444443 322 2234


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      .+|+++.+.|.
T Consensus        97 g~d~v~d~~g~  107 (179)
T d1qora2          97 KVRVVYDSVGR  107 (179)
T ss_dssp             CEEEEEECSCG
T ss_pred             CeEEEEeCccH
Confidence            68999999874

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.00  E-value=1.2e-05  Score=52.59  Aligned_cols=79  Identities=14%  Similarity=0.308  Sum_probs=53.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++||+|+++++|...++.+...|++++++.+++++.    +.+++.  +....   .|-.+++-.+++ .+.. ...
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~----~~l~~~--Ga~~v---i~~~~~~~~~~v-~~~t-~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR----EMLSRL--GVEYV---GDSRSVDFADEI-LELT-DGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH----HHHHTT--CCSEE---EETTCSTHHHHH-HHHT-TTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc----cccccc--ccccc---ccCCccCHHHHH-HHHh-CCC
Confidence            468999999999999999998888899999998875443    233333  44422   244454433332 2221 123


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.++|
T Consensus        94 g~d~v~d~~g  103 (183)
T d1pqwa_          94 GVDVVLNSLA  103 (183)
T ss_dssp             CEEEEEECCC
T ss_pred             CEEEEEeccc
Confidence            6999999988

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.99  E-value=1.9e-05  Score=51.03  Aligned_cols=82  Identities=20%  Similarity=0.174  Sum_probs=52.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC-
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG-  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  106 (147)
                      .|.+++|+| +|++|...+..+...|++|+++++++++.+.+.+ +     +....+ ..|-.+ ++.....+++.+.. 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~-----ga~~~~-~~~~~~-~~~~~~~~~~~~~~g   96 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-C-----GADVTL-VVDPAK-EEESSIIERIRSAIG   96 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-T-----TCSEEE-ECCTTT-SCHHHHHHHHHHHSS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-c-----CCcEEE-eccccc-cccchhhhhhhcccc
Confidence            467899997 6899999998888899999999998665433322 2     333322 222221 12333344444443 


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      ..+|++|.++|.
T Consensus        97 ~g~D~vid~~g~  108 (170)
T d1e3ja2          97 DLPNVTIDCSGN  108 (170)
T ss_dssp             SCCSEEEECSCC
T ss_pred             cCCceeeecCCC
Confidence            368999999885

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.98  E-value=7.5e-06  Score=51.00  Aligned_cols=72  Identities=13%  Similarity=0.167  Sum_probs=52.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      +++|.|+ |.+|+.+++.|.+.|++|++++.+++..+++.+++       ...++..|.++++.+.++      .....|
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-------~~~vi~Gd~~~~~~l~~~------~i~~a~   67 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-------DALVINGDCTKIKTLEDA------GIEDAD   67 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-------SSEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-------hhhhccCcccchhhhhhc------Chhhhh
Confidence            5788997 89999999999999999999999877655544321       345677888888866544      112466


Q ss_pred             EEEEcc
Q 044688          111 ILINNA  116 (147)
Q Consensus       111 ~lv~~a  116 (147)
                      .++...
T Consensus        68 ~vv~~t   73 (132)
T d1lssa_          68 MYIAVT   73 (132)
T ss_dssp             EEEECC
T ss_pred             hhcccC
Confidence            666543

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.96  E-value=2.2e-05  Score=51.07  Aligned_cols=77  Identities=12%  Similarity=0.151  Sum_probs=58.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.+|.++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+.+.+.+...   ..+.....|..              
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~---~~~~~~~~~~~--------------   75 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQAVSMDSI--------------   75 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEEEEGGGC--------------
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc---cccchhhhccc--------------
Confidence            4678999999987 77899999999988889999999988888887777543   34444443311              


Q ss_pred             cCCCccEEEEccccC
Q 044688          105 KGLPLNILINNAGIM  119 (147)
Q Consensus       105 ~~~~id~lv~~ag~~  119 (147)
                      .....|++||++...
T Consensus        76 ~~~~~diiIN~tp~g   90 (171)
T d1p77a1          76 PLQTYDLVINATSAG   90 (171)
T ss_dssp             CCSCCSEEEECCCC-
T ss_pred             cccccceeeeccccc
Confidence            124789999998654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.96  E-value=1.2e-05  Score=52.67  Aligned_cols=79  Identities=19%  Similarity=0.193  Sum_probs=51.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..|.++||+|++||+|...++-....|++|+.+.+++++.+.+. .+     +.+...   |-.+  ...+....  ...
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~l-----Ga~~vi---~~~~--~~~~~~~~--~~~   96 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VL-----GAKEVL---ARED--VMAERIRP--LDK   96 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HT-----TCSEEE---ECC-------------CCS
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hc-----ccceee---ecch--hHHHHHHH--hhc
Confidence            45789999999999999999888889999999999877654333 22     444322   2111  11222211  123


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|+++.+.|-
T Consensus        97 ~gvD~vid~vgg  108 (176)
T d1xa0a2          97 QRWAAAVDPVGG  108 (176)
T ss_dssp             CCEEEEEECSTT
T ss_pred             cCcCEEEEcCCc
Confidence            479999999884

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.94  E-value=3.9e-05  Score=50.10  Aligned_cols=82  Identities=20%  Similarity=0.240  Sum_probs=51.6

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....+ ...-.+..+..+.+.+... .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~l-----Ga~~vi-~~~~~~~~~~~~~i~~~~~-~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEI-----GADLTL-NRRETSVEERRKAIMDITH-G   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHT-----TCSEEE-ETTTSCHHHHHHHHHHHTT-T
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccc-----cceEEE-eccccchHHHHHHHHHhhC-C
Confidence            5899999986 8999999999988998 899999987655422 222     443322 2211222223222222211 2


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus        99 ~g~Dvvid~vG~  110 (182)
T d1vj0a2          99 RGADFILEATGD  110 (182)
T ss_dssp             SCEEEEEECSSC
T ss_pred             CCceEEeecCCc
Confidence            258999999875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.90  E-value=3.2e-05  Score=50.19  Aligned_cols=75  Identities=16%  Similarity=0.178  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|.+++|+|++|++|...+......|++|+.+.+++++.+.+. ++     +.+..+   |..+.  .    ++.. ..
T Consensus        26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~l-----Ga~~~i---~~~~~--~----~~~~-~~   89 (171)
T d1iz0a2          26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-AL-----GAEEAA---TYAEV--P----ERAK-AW   89 (171)
T ss_dssp             CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HT-----TCSEEE---EGGGH--H----HHHH-HT
T ss_pred             CCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cc-----ccceee---ehhhh--h----hhhh-cc
Confidence            36789999999999999999988888999999998876654333 22     443222   33221  1    2222 23


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      .++|++++++|
T Consensus        90 ~g~D~v~d~~G  100 (171)
T d1iz0a2          90 GGLDLVLEVRG  100 (171)
T ss_dssp             TSEEEEEECSC
T ss_pred             ccccccccccc
Confidence            47999999876

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=1.7e-05  Score=44.92  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=36.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      ..+.+++|+|+++|+|.....-+...|++|+.+.+++++.+-+
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~   72 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence            3578899999999999999998888899999999887665433

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=0.00014  Score=46.93  Aligned_cols=81  Identities=22%  Similarity=0.252  Sum_probs=52.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+ +++     +... .+..+-.+.....+.+..-.  .
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~-----Ga~~-~~~~~~~~~~~~~~~~~~~~--g   95 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEI-----GADL-VLQISKESPQEIARKVEGQL--G   95 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHT-----TCSE-EEECSSCCHHHHHHHHHHHH--T
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHh-----CCcc-cccccccccccccccccccC--C
Confidence            4678999986 9999999998888998 799999886654432 222     4333 22333334444444333322  2


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus        96 ~g~Dvvid~~G~  107 (171)
T d1pl8a2          96 CKPEVTIECTGA  107 (171)
T ss_dssp             SCCSEEEECSCC
T ss_pred             CCceEEEeccCC
Confidence            368999999884

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=7.2e-05  Score=50.69  Aligned_cols=80  Identities=19%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             CCCCCCEEEEecC----------------CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEec
Q 044688           25 IDATGLTAIVTGA----------------SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD   88 (147)
Q Consensus        25 ~~~~~~~~litG~----------------~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (147)
                      .+|.|+.+|||+|                ||..|.++|+.+...|++|.++.-.....          . ...+..  ..
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~----------~-p~~~~~--~~   68 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP----------T-PPFVKR--VD   68 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC----------C-CTTEEE--EE
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC----------c-cccccc--ce
Confidence            3688999999986                47899999999999999998876543210          0 112222  24


Q ss_pred             CCCHHHHHHHHHHHHhcCCCccEEEEccccCC
Q 044688           89 LSSLASVRKFASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~  120 (147)
                      +.+.++....+.+.   ....|++|.+|++..
T Consensus        69 ~~t~~~m~~~~~~~---~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          69 VMTALEMEAAVNAS---VQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CCSHHHHHHHHHHH---GGGCSEEEECCBCCS
T ss_pred             ehhhHHHHHHHHhh---hccceeEeeeechhh
Confidence            44555554444433   346899999999864

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.77  E-value=2.2e-05  Score=51.67  Aligned_cols=78  Identities=14%  Similarity=0.156  Sum_probs=50.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +.+|||+|++||+|...++-....|++ |+.+..++++...+..++     +....   .|..+++ ..+.+.+..  ..
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----gad~v---i~~~~~~-~~~~~~~~~--~~   99 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----GFDAA---VNYKTGN-VAEQLREAC--PG   99 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----CCSEE---EETTSSC-HHHHHHHHC--TT
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----cceEE---eeccchh-HHHHHHHHh--cc
Confidence            479999999999999999888778986 444555544444444333     33322   2444443 333344442  23


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      ++|+++.+.|
T Consensus       100 GvDvv~D~vG  109 (187)
T d1vj1a2         100 GVDVYFDNVG  109 (187)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEecCC
Confidence            6999999987

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.61  E-value=2.9e-05  Score=48.15  Aligned_cols=73  Identities=12%  Similarity=0.067  Sum_probs=49.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |.++|.|. |.+|..+++.|.+.|.+|++++.+++..+++    ...  +  ...+.+|.++++.+.++-      ....
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~----~~~--~--~~~~~gd~~~~~~l~~a~------i~~a   65 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASY--A--THAVIANATEENELLSLG------IRNF   65 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHT----TTT--C--SEEEECCTTCTTHHHHHT------GGGC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHH----HHh--C--CcceeeecccchhhhccC------Cccc
Confidence            56778877 7899999999999999999999986654433    222  2  234567888887665431      1145


Q ss_pred             cEEEEccc
Q 044688          110 NILINNAG  117 (147)
Q Consensus       110 d~lv~~ag  117 (147)
                      |.+|...+
T Consensus        66 ~~vi~~~~   73 (134)
T d2hmva1          66 EYVIVAIG   73 (134)
T ss_dssp             SEEEECCC
T ss_pred             cEEEEEcC
Confidence            66665543

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.59  E-value=8.5e-05  Score=47.83  Aligned_cols=80  Identities=15%  Similarity=0.123  Sum_probs=53.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+.+++|+|++|++|...+..+...|. +|+++++++++.+.+. ++     +... .  .|.++.+..++..+..  ..
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~-----Ga~~-~--i~~~~~~~~~~~~~~~--~~   95 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA-----GADY-V--INASMQDPLAEIRRIT--ES   95 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH-----TCSE-E--EETTTSCHHHHHHHHT--TT
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-Hc-----CCce-e--eccCCcCHHHHHHHHh--hc
Confidence            568999999999999999998888885 8888998865433332 23     4332 2  2444444444443322  22


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +.+|++|.++|.
T Consensus        96 ~~~d~vid~~g~  107 (170)
T d1jvba2          96 KGVDAVIDLNNS  107 (170)
T ss_dssp             SCEEEEEESCCC
T ss_pred             ccchhhhccccc
Confidence            358999999874

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.50  E-value=0.0005  Score=44.05  Aligned_cols=76  Identities=16%  Similarity=0.192  Sum_probs=50.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+.+ .++     +....+...+-.+   .   .   ....+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~l-----Ga~~~i~~~~~~~---~---~---~~~~~   90 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA-MKM-----GADHYIATLEEGD---W---G---EKYFD   90 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHH-----TCSEEEEGGGTSC---H---H---HHSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh-hcc-----CCcEEeeccchHH---H---H---Hhhhc
Confidence            5789999986 8999998887778899999999987765543 333     4433222222111   1   1   12335


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      .+|.++.+.+..
T Consensus        91 ~~d~vi~~~~~~  102 (168)
T d1piwa2          91 TFDLIVVCASSL  102 (168)
T ss_dssp             CEEEEEECCSCS
T ss_pred             ccceEEEEecCC
Confidence            789999887643

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.50  E-value=0.00061  Score=42.86  Aligned_cols=43  Identities=19%  Similarity=0.186  Sum_probs=36.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      +...-+++.|.|+.|.+|..+++.|.+.|++|.+.+++.....
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~   47 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVA   47 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGH
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccccc
Confidence            3445578999999999999999999999999999999865443

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00041  Score=44.45  Aligned_cols=75  Identities=16%  Similarity=0.220  Sum_probs=51.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      -.|.+++|.|+ |++|...+..+...|+++++++++.++.+ ...++     +....   .|..+.+...       ...
T Consensus        29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~l-----Gad~~---i~~~~~~~~~-------~~~   91 (168)
T d1uufa2          29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKAL-----GADEV---VNSRNADEMA-------AHL   91 (168)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHH-----TCSEE---EETTCHHHHH-------TTT
T ss_pred             CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhcc-----CCcEE---EECchhhHHH-------Hhc
Confidence            35789999986 89999999888889999999888766543 33444     43322   3554444322       222


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus        92 ~~~D~vid~~g~  103 (168)
T d1uufa2          92 KSFDFILNTVAA  103 (168)
T ss_dssp             TCEEEEEECCSS
T ss_pred             CCCceeeeeeec
Confidence            479999999875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.42  E-value=7.8e-05  Score=48.25  Aligned_cols=42  Identities=29%  Similarity=0.404  Sum_probs=35.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      .+.++||+|++||+|...++.....|++|+.+.+++++.+.+
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~   64 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL   64 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH
Confidence            466899999999999999988778899999999987765544

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.40  E-value=0.00052  Score=43.75  Aligned_cols=83  Identities=19%  Similarity=0.155  Sum_probs=55.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH--------HhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI--------VKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l--------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      +.|.|. |-+|..+|+.|.+.|++|++.+|+++..+++.+.-        .+....+++.++..   ..+.+.++++++.
T Consensus         3 I~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l~   78 (165)
T d2f1ka2           3 IGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKLI   78 (165)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHHG
T ss_pred             EEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhhh
Confidence            566665 89999999999999999999999876555443311        01111334444333   3567888888887


Q ss_pred             hcCCCccEEEEcccc
Q 044688          104 TKGLPLNILINNAGI  118 (147)
Q Consensus       104 ~~~~~id~lv~~ag~  118 (147)
                      ....+=.++++.++.
T Consensus        79 ~~l~~~~iv~~~~s~   93 (165)
T d2f1ka2          79 PHLSPTAIVTDVASV   93 (165)
T ss_dssp             GGSCTTCEEEECCSC
T ss_pred             hhcccccceeecccc
Confidence            666555677666554

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.38  E-value=0.00069  Score=43.76  Aligned_cols=86  Identities=15%  Similarity=0.122  Sum_probs=58.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH---------------HHhhCCCCeeEEEEecCCCHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA---------------IVKEIPTAKVDVLELDLSSLAS   94 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~---------------l~~~~~~~~~~~~~~D~~~~~~   94 (147)
                      +.+-|.|. |-+|..+|+.|++.|++|++.+|++++.+++.+.               +....  .....+...+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~--~~~~~ii~~~~~~~~   79 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKL--KKPRRIILLVKAGQA   79 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHB--CSSCEEEECSCTTHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhh--cccceEEEecCchHH
Confidence            45667777 7899999999999999999999998877666432               11111  122334445566667


Q ss_pred             HHHHHHHHHhcCCCccEEEEcccc
Q 044688           95 VRKFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        95 ~~~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      +..+.+.+.....+-+++|.+.-.
T Consensus        80 v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          80 VDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHHHHhccccCcEEEecCcc
Confidence            777777776665555677766543

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.34  E-value=0.00043  Score=43.63  Aligned_cols=79  Identities=10%  Similarity=0.091  Sum_probs=52.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++++.|.|+ |.+|..+|..|+..|  .+|+++++++++.+-...++.... ..........|   .++         
T Consensus         3 ~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~---------   69 (146)
T d1ez4a1           3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD---------   69 (146)
T ss_dssp             TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH---------
Confidence            45678889995 999999999999987  489999998766554444554311 12233333334   221         


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                        ....|++|.++|...
T Consensus        70 --~~~adivvitag~~~   84 (146)
T d1ez4a1          70 --CKDADLVVITAGAPQ   84 (146)
T ss_dssp             --GTTCSEEEECCCC--
T ss_pred             --hccccEEEEeccccc
Confidence              126899999999753

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.00014  Score=47.39  Aligned_cols=42  Identities=24%  Similarity=0.307  Sum_probs=36.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV   69 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~   69 (147)
                      .+.++||+|++||+|...++-....|++|+.+.+++++.+.+
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~   72 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL   72 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence            456899999999999999988888999999999987775443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.33  E-value=0.00041  Score=44.78  Aligned_cols=78  Identities=10%  Similarity=0.078  Sum_probs=49.0

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCE-EEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVH-VFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.|+ |++|...+..+...|++ |+++++++++.+. .+++     +... +  .|..+.+ +.+.+.++  ..
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~-----Ga~~-~--i~~~~~~-~~~~i~~~--t~   94 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQL-----GATH-V--INSKTQD-PVAAIKEI--TD   94 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHH-----TCSE-E--EETTTSC-HHHHHHHH--TT
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHc-----CCeE-E--EeCCCcC-HHHHHHHH--cC
Confidence            4788999987 89999999888888885 5566666544332 2333     3322 2  2444433 33333333  23


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.++|.
T Consensus        95 gg~D~vid~~G~  106 (174)
T d1f8fa2          95 GGVNFALESTGS  106 (174)
T ss_dssp             SCEEEEEECSCC
T ss_pred             CCCcEEEEcCCc
Confidence            579999999885

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.32  E-value=0.00014  Score=47.24  Aligned_cols=79  Identities=16%  Similarity=0.135  Sum_probs=50.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++.+.+ .++     +....   +|..+.+..+++.+ .. ..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~l-----Ga~~~---i~~~~~~~~~~v~~-~t-~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFY-----GATDI---LNYKNGHIEDQVMK-LT-NG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHH-----TCSEE---ECGGGSCHHHHHHH-HT-TT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-Hhh-----Ccccc---ccccchhHHHHHHH-Hh-hc
Confidence            4678999976 8999999988888897 799999886554333 333     43322   24434333333222 21 12


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus        95 ~G~D~vid~~g~  106 (174)
T d1jqba2          95 KGVDRVIMAGGG  106 (174)
T ss_dssp             SCEEEEEECSSC
T ss_pred             cCcceEEEccCC
Confidence            359999999985

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.00065  Score=42.80  Aligned_cols=76  Identities=17%  Similarity=0.098  Sum_probs=54.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLN  110 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id  110 (147)
                      .++|.|. +.+|..+++.|.+.|.+++++..+++.......+...    ..+.++..|.++++.++++-      ....+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~----~~~~vi~Gd~~d~~~L~~a~------i~~a~   73 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAG------IDRCR   73 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHT------TTTCS
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc----CCcEEEEccCcchHHHHHhc------cccCC
Confidence            5778887 6899999999999999999999887655545544432    35777889999988665431      12466


Q ss_pred             EEEEccc
Q 044688          111 ILINNAG  117 (147)
Q Consensus       111 ~lv~~ag  117 (147)
                      .+|...+
T Consensus        74 ~vi~~~~   80 (153)
T d1id1a_          74 AILALSD   80 (153)
T ss_dssp             EEEECSS
T ss_pred             EEEEccc
Confidence            6665543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.30  E-value=0.0016  Score=41.03  Aligned_cols=80  Identities=18%  Similarity=0.191  Sum_probs=53.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      ...++++.|+|+ |.+|..+|..|+..|.  ++++.+++++..+-...++....  ....+.....|.   +        
T Consensus         3 ~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~--------   70 (148)
T d1ldna1           3 NNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D--------   70 (148)
T ss_dssp             TTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G--------
T ss_pred             CCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H--------
Confidence            345678889996 9999999999999874  79999998766555555554321  122333333332   2        


Q ss_pred             HHhcCCCccEEEEccccCC
Q 044688          102 FTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~  120 (147)
                         ....-|++|.++|...
T Consensus        71 ---~l~daDvvvitag~~~   86 (148)
T d1ldna1          71 ---DCRDADLVVICAGANQ   86 (148)
T ss_dssp             ---GTTTCSEEEECCSCCC
T ss_pred             ---HhccceeEEEeccccc
Confidence               1236899999999764

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.28  E-value=0.00053  Score=44.20  Aligned_cols=80  Identities=15%  Similarity=0.135  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.|+ +|+|...+..+...|+ +|+++++++++.+.. .++     +....+...|-  .+.+.......  ..
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~-----Ga~~~i~~~~~--~~~~~~~~~~~--~~   96 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEV-----GATECVNPQDY--KKPIQEVLTEM--SN   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCSEEECGGGC--SSCHHHHHHHH--TT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHh-----CCeeEEecCCc--hhHHHHHHHHH--hc
Confidence            5689999999 6899999999999885 899999887764432 222     33322222222  22244444433  23


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +++|++|.+.|.
T Consensus        97 ~G~D~vid~~G~  108 (176)
T d2jhfa2          97 GGVDFSFEVIGR  108 (176)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCCEEEecCCc
Confidence            579999999885

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.24  E-value=0.00096  Score=43.15  Aligned_cols=81  Identities=17%  Similarity=0.149  Sum_probs=52.4

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -.|.+++|+|+ ||+|...+..+...|+ +|+.+++++++++- ..++     +....+-.-|-.+.  .....+..  .
T Consensus        28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~-Ak~~-----GA~~~in~~~~~~~--~~~~~~~~--~   96 (176)
T d1d1ta2          28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEK-AMAV-----GATECISPKDSTKP--ISEVLSEM--T   96 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHH-HHHH-----TCSEEECGGGCSSC--HHHHHHHH--H
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHH-HHhc-----CCcEEECccccchH--HHHHHHHh--c
Confidence            35788999986 8999999999999995 89999999876553 3333     44433322222211  22222221  2


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      ..++|++|.+.|.
T Consensus        97 g~G~d~vi~~~g~  109 (176)
T d1d1ta2          97 GNNVGYTFEVIGH  109 (176)
T ss_dssp             TSCCCEEEECSCC
T ss_pred             cccceEEEEeCCc
Confidence            3469999998874

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.14  E-value=0.0028  Score=40.53  Aligned_cols=41  Identities=22%  Similarity=0.177  Sum_probs=35.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      .|++-|.|+ |.+|.++|..|++.|++|.+.+|++++.+...
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~   41 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ   41 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            378889998 88999999999999999999999876655544

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.11  E-value=0.0015  Score=41.00  Aligned_cols=77  Identities=17%  Similarity=0.181  Sum_probs=47.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++.|+|++|.+|..+|..|+.+|.  ++++.+.++.+.  ...++...   ........-+ ...+..+.++       .
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~--~a~Dl~~~---~~~~~~~~~~-~~~~~~~~~~-------~   68 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG--VAADLSHI---ETRATVKGYL-GPEQLPDCLK-------G   68 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH--HHHHHTTS---SSSCEEEEEE-SGGGHHHHHT-------T
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch--hhHHHhhh---hhhcCCCeEE-cCCChHHHhC-------C
Confidence            578999999999999999998874  799999865322  22233321   1111111111 2222332222       6


Q ss_pred             ccEEEEccccCC
Q 044688          109 LNILINNAGIMA  120 (147)
Q Consensus       109 id~lv~~ag~~~  120 (147)
                      -|++|..+|...
T Consensus        69 aDivVitag~~~   80 (144)
T d1mlda1          69 CDVVVIPAGVPR   80 (144)
T ss_dssp             CSEEEECCSCCC
T ss_pred             CCEEEECCCcCC
Confidence            899999999753

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.08  E-value=0.0021  Score=41.04  Aligned_cols=80  Identities=11%  Similarity=0.079  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~  104 (147)
                      -.|.+++|.|+ +|+|...+..+...|+ +|+.+++++++. ++..++     +....+   |.. +.+.+.+.+.+.  
T Consensus        27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~l-----Ga~~~i---~~~~~~~~~~~~~~~~--   94 (176)
T d2fzwa2          27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEF-----GATECI---NPQDFSKPIQEVLIEM--   94 (176)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHH-----TCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHh-----CCcEEE---eCCchhhHHHHHHHHH--
Confidence            35788999987 5899999988888896 567777665553 444445     433322   221 123344444433  


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                      ..+++|++|.++|.
T Consensus        95 ~~~g~D~vid~~G~  108 (176)
T d2fzwa2          95 TDGGVDYSFECIGN  108 (176)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEeeecCCC
Confidence            23479999999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.07  E-value=0.00095  Score=39.93  Aligned_cols=39  Identities=10%  Similarity=0.206  Sum_probs=34.2

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++++||+++|.|++ .+|..-++.|++.|++|++++...
T Consensus         7 ~l~l~~k~vlVvG~G-~va~~ka~~ll~~ga~v~v~~~~~   45 (113)
T d1pjqa1           7 FCQLRDRDCLIVGGG-DVAERKARLLLEAGARLTVNALTF   45 (113)
T ss_dssp             EECCBTCEEEEECCS-HHHHHHHHHHHHTTBEEEEEESSC
T ss_pred             EEEeCCCEEEEECCC-HHHHHHHHHHHHCCCeEEEEeccC
Confidence            347999999999995 599999999999999999987654

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.06  E-value=0.0045  Score=38.74  Aligned_cols=77  Identities=18%  Similarity=0.210  Sum_probs=48.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCc--cchHHHHHHHh---hCC-CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMA--AGTDVKDAIVK---EIP-TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~--~~~~~~~~l~~---~~~-~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      ++.|+|++|.+|..+|..|+.++  .++++.++++.  +.+-...++..   ..+ ..++.....+  +.+.        
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~~~--------   71 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NLRI--------   71 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CGGG--------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hHHH--------
Confidence            47899999999999999999988  38999998753  22333334432   111 1122222221  2211        


Q ss_pred             HhcCCCccEEEEccccCC
Q 044688          103 TTKGLPLNILINNAGIMA  120 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~  120 (147)
                         ...-|++|.+||...
T Consensus        72 ---l~~aDvVVitAG~~~   86 (145)
T d1hyea1          72 ---IDESDVVIITSGVPR   86 (145)
T ss_dssp             ---GTTCSEEEECCSCCC
T ss_pred             ---hccceEEEEeccccc
Confidence               126899999999753

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.02  E-value=0.00041  Score=40.21  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=33.3

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      +++||+++|.|. |.-|.++|+.|.++|++|++.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999999 55699999999999999999998643

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.02  E-value=0.0028  Score=40.83  Aligned_cols=81  Identities=16%  Similarity=0.126  Sum_probs=50.9

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++.+ +.+++     +.... +...-.+ +......+..  .
T Consensus        27 ~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~-~a~~~-----Ga~~~-i~~~~~~-~~~~~~~~~~--~   95 (174)
T d1e3ia2          27 TPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFP-KAKAL-----GATDC-LNPRELD-KPVQDVITEL--T   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHT-----TCSEE-ECGGGCS-SCHHHHHHHH--H
T ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHH-HHHHh-----CCCcc-cCCccch-hhhhhhHhhh--h
Confidence            35688999974 9999999999999998 6888888766533 33333     33322 1111111 2233333332  2


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      .+++|++|.++|.
T Consensus        96 ~~G~d~vie~~G~  108 (174)
T d1e3ia2          96 AGGVDYSLDCAGT  108 (174)
T ss_dssp             TSCBSEEEESSCC
T ss_pred             cCCCcEEEEeccc
Confidence            3479999999885

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.02  E-value=0.00041  Score=44.95  Aligned_cols=50  Identities=16%  Similarity=0.237  Sum_probs=42.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE   76 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~   76 (147)
                      .++++|.++|.|+ ||.+++++..|.+.| +|++..|+.++.+++.+.+...
T Consensus        14 ~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          14 GRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            3589999999987 678999999997777 9999999988888888877654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.00  E-value=0.00041  Score=44.60  Aligned_cols=45  Identities=18%  Similarity=0.307  Sum_probs=38.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l   73 (147)
                      .++.++|.|+ ||.+++++..|.+.|+ ++.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            5788999988 8999999999999997 7999999987766665544

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.00  E-value=0.0024  Score=40.71  Aligned_cols=81  Identities=10%  Similarity=0.083  Sum_probs=52.6

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      .++..++.|+|+ |.+|..+|..|+..|.  ++++.+++++...-...++..... ......+..  .+.+.        
T Consensus        16 ~~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~--~d~~~--------   84 (159)
T d2ldxa1          16 KLSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFG--KDYNV--------   84 (159)
T ss_dssp             CCCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEE--SSGGG--------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEec--cchhh--------
Confidence            355567888895 9999999999999874  799999887665555555653211 111122222  12221        


Q ss_pred             HhcCCCccEEEEccccCC
Q 044688          103 TTKGLPLNILINNAGIMA  120 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~  120 (147)
                         ...-|++|..||...
T Consensus        85 ---~~~adivvitag~~~   99 (159)
T d2ldxa1          85 ---SANSKLVIITAGARM   99 (159)
T ss_dssp             ---GTTEEEEEECCSCCC
T ss_pred             ---hccccEEEEeccccc
Confidence               136899999999753

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.00  E-value=0.0014  Score=41.63  Aligned_cols=39  Identities=21%  Similarity=0.230  Sum_probs=32.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .|.+++|.|+ |++|...+..+...|++|+.+++++++.+
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~   65 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLE   65 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHH
Confidence            4788999886 99999988888888999999998866544

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.98  E-value=0.00089  Score=42.97  Aligned_cols=78  Identities=18%  Similarity=0.217  Sum_probs=48.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .|.+++|.|+ |++|...+..+...|+ +|+.+++++++.+.+.    +.  +... ++  |-. .+.+....+.  ...
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~--ga~~-~i--~~~-~~~~~~~~~~--~~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RL--GADH-VV--DAR-RDPVKQVMEL--TRG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HT--TCSE-EE--ETT-SCHHHHHHHH--TTT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hc--ccce-ee--cCc-ccHHHHHHHh--hCC
Confidence            4688999885 9999998888887886 6777787755433222    22  3332 22  322 2334444332  122


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      .++|++|.++|.
T Consensus        99 ~g~d~vid~~g~  110 (172)
T d1h2ba2          99 RGVNVAMDFVGS  110 (172)
T ss_dssp             CCEEEEEESSCC
T ss_pred             CCceEEEEecCc
Confidence            369999999985

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.95  E-value=0.0025  Score=40.20  Aligned_cols=79  Identities=15%  Similarity=0.002  Sum_probs=44.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC---------EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV---------HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~---------~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      -++.|+||+|.+|..++..|+..+.         +++....+.+..+....++.... ......+...-.+.+    .  
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~--   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCA-FPLLAGLEATDDPKV----A--   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT-CTTEEEEEEESCHHH----H--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccc-cccccccccCCchhh----h--
Confidence            3799999999999999999998642         12222233333333333333321 122323333221221    1  


Q ss_pred             HHHhcCCCccEEEEccccCC
Q 044688          101 DFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~~  120 (147)
                           +...|++|.++|...
T Consensus        78 -----~~~advViitaG~~~   92 (154)
T d1y7ta1          78 -----FKDADYALLVGAAPR   92 (154)
T ss_dssp             -----TTTCSEEEECCCCCC
T ss_pred             -----cccccEEEeecCcCC
Confidence                 236999999999754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00063  Score=44.76  Aligned_cols=41  Identities=22%  Similarity=0.201  Sum_probs=34.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~   45 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK   45 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHh
Confidence            67888888 789999999999999999999999876554433

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.92  E-value=0.0016  Score=41.27  Aligned_cols=81  Identities=16%  Similarity=0.095  Sum_probs=51.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      -+.+++.|.|+ |.+|..+|..++..+. ++++.+.+++..+-...++....  .+........  ++.   ...++   
T Consensus         5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~--~~~---~~~~~---   75 (154)
T d1pzga1           5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE--YSY---EAALT---   75 (154)
T ss_dssp             SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE--CSH---HHHHT---
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc--Cch---hhhhc---
Confidence            44578888897 9999999999888884 89999998876655555554321  0111111111  112   11112   


Q ss_pred             hcCCCccEEEEccccCC
Q 044688          104 TKGLPLNILINNAGIMA  120 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~  120 (147)
                          .-|++|.++|...
T Consensus        76 ----~adiVvitag~~~   88 (154)
T d1pzga1          76 ----GADCVIVTAGLTK   88 (154)
T ss_dssp             ----TCSEEEECCSCSS
T ss_pred             ----CCCeEEEeccccc
Confidence                6899999999764

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.91  E-value=0.00011  Score=48.88  Aligned_cols=42  Identities=21%  Similarity=0.355  Sum_probs=36.0

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD   68 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~   68 (147)
                      +++||++.|-| -|.+|..+|+.|.+.|++|++++.+.+....
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            59999999998 5779999999999999999999887654443

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.90  E-value=0.0085  Score=38.59  Aligned_cols=81  Identities=11%  Similarity=-0.110  Sum_probs=45.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCC---C----EEEEEEccCc--cchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRG---V----HVFMAVRNMA--AGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g---~----~v~~~~r~~~--~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      +..++.||||+|.||..++..|++..   .    .+.+.+....  .++...-++........-.....+  +.   ...
T Consensus        23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~--~~---~~~   97 (175)
T d7mdha1          23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI--DP---YEV   97 (175)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES--CH---HHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc--cc---hhh
Confidence            44579999999999999999999753   2    4555555432  223333334332111111111121  11   111


Q ss_pred             HHHHHhcCCCccEEEEccccCC
Q 044688           99 ASDFTTKGLPLNILINNAGIMA  120 (147)
Q Consensus        99 ~~~~~~~~~~id~lv~~ag~~~  120 (147)
                             +...|++|..+|...
T Consensus        98 -------~~~aDvVvi~ag~~r  112 (175)
T d7mdha1          98 -------FEDVDWALLIGAKPR  112 (175)
T ss_dssp             -------TTTCSEEEECCCCCC
T ss_pred             -------ccCCceEEEeeccCC
Confidence                   237999999999753

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.88  E-value=0.0091  Score=37.92  Aligned_cols=80  Identities=10%  Similarity=0.048  Sum_probs=52.8

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASD  101 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~  101 (147)
                      .+.++++.|.|+ |.+|..+|..|+..|.  ++++.+++++..+-...++...  +.+........|   .+.+      
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~~------   86 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSVT------   86 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGGG------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhhc------
Confidence            345678888896 9999999999999985  7999999876655555555431  111222221222   2221      


Q ss_pred             HHhcCCCccEEEEccccCC
Q 044688          102 FTTKGLPLNILINNAGIMA  120 (147)
Q Consensus       102 ~~~~~~~id~lv~~ag~~~  120 (147)
                           ..-|++|..||...
T Consensus        87 -----~~adiVVitAg~~~  100 (160)
T d1i0za1          87 -----ANSKIVVVTAGVRQ  100 (160)
T ss_dssp             -----TTCSEEEECCSCCC
T ss_pred             -----ccccEEEEecCCcc
Confidence                 26899999999754

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.88  E-value=0.0017  Score=40.73  Aligned_cols=75  Identities=16%  Similarity=0.158  Sum_probs=49.8

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      |++.|+|+ |.+|..+|..|+.+|  .++++.+.++++.+-...++....  ..........|   .+.+          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            67778895 899999999999987  389999998776554444454321  12223332222   3222          


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                       ..-|++|.+||..
T Consensus        68 -~~adiVVitaG~~   80 (146)
T d1hyha1          68 -ADADVVISTLGNI   80 (146)
T ss_dssp             -TTCSEEEECCSCG
T ss_pred             -ccccEEEEecccc
Confidence             2689999999975

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.86  E-value=0.0034  Score=40.35  Aligned_cols=80  Identities=13%  Similarity=0.105  Sum_probs=51.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHH-HHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA-SVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~  104 (147)
                      -.|.+++|.|+ |++|...+..+...|+ +|+.+++++++++... ++     +....+   |.++.+ .+.+.....  
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~l-----Ga~~~i---~~~~~d~~~~~~~~~~--   93 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-EL-----GATECL---NPKDYDKPIYEVICEK--   93 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HT-----TCSEEE---CGGGCSSCHHHHHHHH--
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-Hc-----CCcEEE---cCCCchhHHHHHHHHh--
Confidence            45789999985 8999999999999997 7889998877654333 22     433322   322211 123332322  


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                      ..+++|++|.++|.
T Consensus        94 ~~~G~d~vid~~g~  107 (174)
T d1p0fa2          94 TNGGVDYAVECAGR  107 (174)
T ss_dssp             TTSCBSEEEECSCC
T ss_pred             cCCCCcEEEEcCCC
Confidence            23468888888774

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.73  E-value=0.0013  Score=43.21  Aligned_cols=80  Identities=18%  Similarity=0.152  Sum_probs=50.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -.|.+++|.|+ |++|...+..+...|+ +|+++++++++++.+. .+     +....   .|-.+. ++.+.+.++ ..
T Consensus        24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~-----Ga~~~---~~~~~~-~~~~~i~~~-t~   91 (195)
T d1kola2          24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQ-----GFEIA---DLSLDT-PLHEQIAAL-LG   91 (195)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HT-----TCEEE---ETTSSS-CHHHHHHHH-HS
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hc-----cccEE---EeCCCc-CHHHHHHHH-hC
Confidence            35789999986 8999888888777777 7888888765443222 22     44332   233333 233333333 23


Q ss_pred             CCCccEEEEcccc
Q 044688          106 GLPLNILINNAGI  118 (147)
Q Consensus       106 ~~~id~lv~~ag~  118 (147)
                      ..++|++|.+.|.
T Consensus        92 g~g~D~vid~vG~  104 (195)
T d1kola2          92 EPEVDCAVDAVGF  104 (195)
T ss_dssp             SSCEEEEEECCCT
T ss_pred             CCCcEEEEECccc
Confidence            3469999999884

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.64  E-value=0.0011  Score=41.59  Aligned_cols=37  Identities=11%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ..++||++||+|| |.+|..-++.|++.|++|++++..
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999 569999999999999999998754

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.64  E-value=0.0066  Score=38.24  Aligned_cols=39  Identities=15%  Similarity=0.144  Sum_probs=32.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~   65 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE   65 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhh
Confidence            4678889865 99999988888889999999988766544

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.63  E-value=0.0033  Score=42.52  Aligned_cols=62  Identities=18%  Similarity=0.297  Sum_probs=46.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +++++|+|.|+ ||+|..++..|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        28 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~~~  106 (247)
T d1jw9b_          28 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVN  106 (247)
T ss_dssp             HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhhhh
Confidence            77899999995 8899999999999997 788886531                   23455667788887776666655


Q ss_pred             ecC
Q 044688           87 LDL   89 (147)
Q Consensus        87 ~D~   89 (147)
                      ..+
T Consensus       107 ~~~  109 (247)
T d1jw9b_         107 ALL  109 (247)
T ss_dssp             SCC
T ss_pred             hhh
Confidence            433

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.62  E-value=0.0054  Score=38.18  Aligned_cols=76  Identities=14%  Similarity=0.163  Sum_probs=46.9

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhCCC-CeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEIPT-AKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++.|+|+ |.+|..++..++..+.  ++++.+++++..+-...++....+. ........   +.+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh
Confidence            34667786 9999999999999874  7999999987766666666542211 12222111   121           12


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ..-|++|..||...
T Consensus        67 ~~adivvitag~~~   80 (142)
T d1y6ja1          67 KDCDVIVVTAGANR   80 (142)
T ss_dssp             TTCSEEEECCCC--
T ss_pred             CCCceEEEeccccc
Confidence            36899999999753

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.0014  Score=48.33  Aligned_cols=80  Identities=18%  Similarity=0.294  Sum_probs=56.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC-------------------ccchHHHHHHHhhCCCCeeEEEE
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM-------------------AAGTDVKDAIVKEIPTAKVDVLE   86 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~l~~~~~~~~~~~~~   86 (147)
                      +++.++||.|+ ||+|..+++.|+..|. ++.+++.+.                   .+.+.+.+.+.+.+|..++..+.
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~  113 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHF  113 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEEC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeee
Confidence            67788999999 6799999999999997 788886531                   12344566777777777777777


Q ss_pred             ecCCCHHHHHHHHHHHHhcCCCccEEEEcc
Q 044688           87 LDLSSLASVRKFASDFTTKGLPLNILINNA  116 (147)
Q Consensus        87 ~D~~~~~~~~~~~~~~~~~~~~id~lv~~a  116 (147)
                      .++.+..  ..+++       ..|+||++.
T Consensus       114 ~~i~~~~--~~~~~-------~~DlVi~~~  134 (426)
T d1yovb1         114 NKIQDFN--DTFYR-------QFHIIVCGL  134 (426)
T ss_dssp             SCGGGBC--HHHHT-------TCSEEEECC
T ss_pred             ccccchH--HHHHH-------hcchheecc
Confidence            7765433  12222       567777654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.56  E-value=0.034  Score=34.52  Aligned_cols=77  Identities=14%  Similarity=0.138  Sum_probs=47.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-C--CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           31 TAIVTGASSGIGAETTRVLALR-G--VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g--~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++.|+|++|.+|.++|..|+.+ +  .++.+.+..+ ..+-...++........... ...-.+.+.+    +       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~~----~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKG-FSGEDATPAL----E-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEE-ECSSCCHHHH----T-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcE-EEcCCCcccc----C-------
Confidence            5789999999999999988743 4  5899998764 33334445554311122222 1222233222    2       


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      .-|++|.++|...
T Consensus        69 ~aDvvvitaG~~~   81 (145)
T d2cmda1          69 GADVVLISAGVRR   81 (145)
T ss_dssp             TCSEEEECCSCCC
T ss_pred             CCCEEEECCCccC
Confidence            5799999999764

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.55  E-value=0.013  Score=36.44  Aligned_cols=75  Identities=17%  Similarity=0.170  Sum_probs=48.0

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccC--ccchHHHHHHHh--hCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNM--AAGTDVKDAIVK--EIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~--~~~~~~~~~l~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++.|+|++|.+|..+|..++.++.  ++++.+.+.  +..+-...++..  .+ ..+......|   .++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~-~~~~~i~~~~---~~~----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAY-DSNTRVRQGG---YED----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTT-TCCCEEEECC---GGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccc-cCCceEeeCC---HHH----------
Confidence            578999999999999999999874  788988642  223223334432  11 2233333333   221          


Q ss_pred             cCCCccEEEEccccCC
Q 044688          105 KGLPLNILINNAGIMA  120 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~  120 (147)
                       ...-|++|..||...
T Consensus        68 -~~~aDiVvitaG~~~   82 (142)
T d1o6za1          68 -TAGSDVVVITAGIPR   82 (142)
T ss_dssp             -GTTCSEEEECCCCCC
T ss_pred             -hhhcCEEEEeccccc
Confidence             126899999999753

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=96.55  E-value=0.015  Score=36.14  Aligned_cols=76  Identities=14%  Similarity=0.114  Sum_probs=48.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++.|+|+ |.+|..+|..++.+|.  ++++.+.+++..+-...++...  +.+ .......+  +.+.+          
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~-~~~i~~~~--~~~~~----------   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYP-TVSIDGSD--DPEIC----------   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGST-TCEEEEES--CGGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCC-CceeecCC--CHHHh----------
Confidence            35778896 9999999999999884  7999999876654444445432  111 12222221  22211          


Q ss_pred             CCCccEEEEccccCC
Q 044688          106 GLPLNILINNAGIMA  120 (147)
Q Consensus       106 ~~~id~lv~~ag~~~  120 (147)
                       ..-|++|..||...
T Consensus        68 -~daDvVVitaG~~~   81 (143)
T d1llda1          68 -RDADMVVITAGPRQ   81 (143)
T ss_dssp             -TTCSEEEECCCCCC
T ss_pred             -hCCcEEEEeccccc
Confidence             15799999999754

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.50  E-value=0.001  Score=43.49  Aligned_cols=41  Identities=22%  Similarity=0.118  Sum_probs=34.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      |++-|.|+ |-+|..+|..++..|++|++.+++++.+++..+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            45778888 789999999999999999999999776555433

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.0045  Score=39.61  Aligned_cols=40  Identities=35%  Similarity=0.427  Sum_probs=36.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.||.++|.|-+.-+|+.++..|.++|+.|+.+.....
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~   72 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK   72 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccc
Confidence            4689999999999999999999999999999999876544

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.46  E-value=0.0034  Score=39.03  Aligned_cols=76  Identities=18%  Similarity=0.098  Sum_probs=48.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++.|+|+ |.+|..++..|+..+  .++++.+.+++..+-...++....  ...+......  ++.+.           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4677895 999999999999987  489999998876544443432210  0122222222  22222           1


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ...|++|.++|...
T Consensus        68 ~dadvvvitag~~~   81 (142)
T d1guza1          68 ANSDIVIITAGLPR   81 (142)
T ss_dssp             TTCSEEEECCSCCC
T ss_pred             cCCeEEEEEEecCC
Confidence            26899999999754

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.41  E-value=0.011  Score=36.61  Aligned_cols=75  Identities=16%  Similarity=0.262  Sum_probs=48.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccchHHHHHHHhhCC-CCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           31 TAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGTDVKDAIVKEIP-TAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      ++.|.|+ |.+|..++..++..+  .++++.+.+++..+-...++....+ ..+......|   .+.+           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            4667786 899999999999887  4899999987665544444443211 1233332222   2221           2


Q ss_pred             CccEEEEccccCC
Q 044688          108 PLNILINNAGIMA  120 (147)
Q Consensus       108 ~id~lv~~ag~~~  120 (147)
                      .-|++|.+||...
T Consensus        67 ~adivvitag~~~   79 (140)
T d1a5za1          67 GSDVVIVAAGVPQ   79 (140)
T ss_dssp             TCSEEEECCCCCC
T ss_pred             CCCEEEEeccccc
Confidence            6899999999754

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.38  E-value=0.034  Score=35.44  Aligned_cols=88  Identities=15%  Similarity=0.208  Sum_probs=61.0

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..+.+++|.|+ |-.|..-++.....|++|.+.+.+.+.++++......     ++.   .-..+++.+.+.+.      
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-----~~~---~~~~~~~~l~~~~~------   94 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-----RVE---LLYSNSAEIETAVA------   94 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-----GSE---EEECCHHHHHHHHH------
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-----cce---eehhhhhhHHHhhc------
Confidence            45678999988 5688888888999999999999998877766665532     222   23345555655544      


Q ss_pred             CCccEEEEccccCCC--CCCCCHHHH
Q 044688          107 LPLNILINNAGIMAS--PFMLSKDNI  130 (147)
Q Consensus       107 ~~id~lv~~ag~~~~--~~~~~~~~~  130 (147)
                       ..|++|.++-+.+.  +.-.+.+.+
T Consensus        95 -~aDivI~aalipG~~aP~lIt~~mv  119 (168)
T d1pjca1          95 -EADLLIGAVLVPGRRAPILVPASLV  119 (168)
T ss_dssp             -TCSEEEECCCCTTSSCCCCBCHHHH
T ss_pred             -cCcEEEEeeecCCcccCeeecHHHH
Confidence             58999999877652  223454443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.38  E-value=0.0072  Score=39.55  Aligned_cols=65  Identities=14%  Similarity=0.161  Sum_probs=46.8

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH---------HHHHHHhhCCCCeeEEEEecCCCH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD---------VKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~---------~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ..++.||++.|.|. |.||+.+|+.+..-|++|+..++.......         -.+++-+   .+++..+.+.+++.
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~l~~ll~---~sD~i~~~~plt~~  117 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERALGLQRVSTLQDLLF---HSDCVTLHCGLNEH  117 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHHTCEECSSHHHHHH---HCSEEEECCCCCTT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhhccccccchhhccc---cCCEEEEeeccccc
Confidence            35699999999987 679999999999999999998886432111         1122222   35777888877654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.38  E-value=0.0023  Score=40.56  Aligned_cols=85  Identities=21%  Similarity=0.222  Sum_probs=51.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-----CCeeEEEEecCCCHHHHHHHH---HHHH
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-----TAKVDVLELDLSSLASVRKFA---SDFT  103 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----~~~~~~~~~D~~~~~~~~~~~---~~~~  103 (147)
                      +-|.|. |-+|..+|+.|++.|++|++.+|++++.+++.+.......     -.+...+..-+.+.+.+++++   +.+.
T Consensus         3 IgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            455655 8899999999999999999999987766555431100000     012223344455667777765   2233


Q ss_pred             hcCCCccEEEEccc
Q 044688          104 TKGLPLNILINNAG  117 (147)
Q Consensus       104 ~~~~~id~lv~~ag  117 (147)
                      ....+-+++|.+.-
T Consensus        82 ~~~~~g~iiid~sT   95 (161)
T d1vpda2          82 EGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHCCTTCEEEECSC
T ss_pred             hccCCCCEEEECCC
Confidence            33334456666654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.37  E-value=0.0014  Score=42.63  Aligned_cols=105  Identities=18%  Similarity=0.191  Sum_probs=60.9

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchH-HHHHHHhhCCCCeeEEEEecCCCHHHHHHHH-HHHH
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTD-VKDAIVKEIPTAKVDVLELDLSSLASVRKFA-SDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~  103 (147)
                      .+.||++.|.|.+ .||+.+++.+..-|++|+..++....... ....+.+....+++..+.+.+++..  ..++ ++..
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~~~~~~~~~~~l~ell~~sDiv~~~~pl~~~t--~~li~~~~l  115 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTPKEGPWRFTNSLEEALREARAAVCALPLNKHT--RGLVKYQHL  115 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSCCCSSSCCBSCSHHHHTTCSEEEECCCCSTTT--TTCBCHHHH
T ss_pred             cccCceEEEeccc-cccccceeeeeccccccccccccccccceeeeechhhhhhccchhhccccccccc--cccccccee
Confidence            4889999999995 59999999999999999999986532110 0111122222467777777766431  1122 2223


Q ss_pred             hcCCCccEEEEccccCCCCCCCCHHHHHHhhhhh
Q 044688          104 TKGLPLNILINNAGIMASPFMLSKDNIELQFATN  137 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N  137 (147)
                      ++..+=-++||.+ -   ..-.+++.+.+.++-+
T Consensus       116 ~~mk~~ailIN~~-R---G~ivd~~aL~~aL~~~  145 (181)
T d1qp8a1         116 ALMAEDAVFVNVG-R---AEVLDRDGVLRILKER  145 (181)
T ss_dssp             TTSCTTCEEEECS-C---GGGBCHHHHHHHHHHC
T ss_pred             eeccccceEEecc-c---cccccchhhhhhcccC
Confidence            3333444555544 2   1123445555554443

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=96.36  E-value=0.0027  Score=41.88  Aligned_cols=63  Identities=16%  Similarity=0.068  Sum_probs=45.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc--------hHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG--------TDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~--------~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++.||++.|.|. |.||+.+|+.+..-|++|+..++.....        .++.+-+.    ..++..+.+.++..
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~~~~~~~~l~~~l~----~sDii~~~~plt~~  109 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEKKGYYVDSLDDLYK----QADVISLHVPDVPA  109 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHHTTCBCSCHHHHHH----HCSEEEECSCCCGG
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccccccceeeecccccccc----ccccccccCCcccc
Confidence            4689999999998 6799999999999999999888754321        11222222    25677777776643

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.32  E-value=0.027  Score=33.36  Aligned_cols=72  Identities=13%  Similarity=0.117  Sum_probs=53.1

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .....++.|.|+ |.+|+-++....+.|+++++.+.++..-..          ..--.++..|..|.+.+.++....   
T Consensus         8 ~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~----------~va~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           8 RPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM----------HVAHRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             STTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG----------GGSSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchh----------hcCCeEEECCCCCHHHHHHHHHhh---
Confidence            345568999995 789999999999999999999987543110          011245678999999998887754   


Q ss_pred             CCCccEEE
Q 044688          106 GLPLNILI  113 (147)
Q Consensus       106 ~~~id~lv  113 (147)
                        .+|++.
T Consensus        74 --~~DviT   79 (111)
T d1kjqa2          74 --KPHYIV   79 (111)
T ss_dssp             --CCSEEE
T ss_pred             --CCceEE
Confidence              678874

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.29  E-value=0.0024  Score=40.16  Aligned_cols=35  Identities=20%  Similarity=0.106  Sum_probs=31.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      ++.|.|+ |.+|..++..|++.|++|.++.|+.+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5788888 9999999999999999999999987543

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.0066  Score=38.97  Aligned_cols=41  Identities=24%  Similarity=0.282  Sum_probs=37.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA   65 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~   65 (147)
                      .+++||.++|.|-+.-+|+.++..|+++|+.|+.+......
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~   75 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH   75 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence            46899999999999999999999999999999999876543

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=96.25  E-value=0.0074  Score=39.23  Aligned_cols=68  Identities=22%  Similarity=0.183  Sum_probs=47.1

Q ss_pred             CCCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH-------HHHhhCCCCeeEEEEecCCCH
Q 044688           24 GIDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD-------AIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        24 ~~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~-------~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      ..++.++++.|.|. |.||+++++.+...|.+|+..++..........       .+.......++..+.+.+++.
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~~l~~sD~v~~~~plt~~  113 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKELNLTWHATREDMYPVCDVVTLNCPLHPE  113 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHHTCEECSSHHHHGGGCSEEEECSCCCTT
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccccccccCCHHHHHHhccchhhccccccc
Confidence            45689999999996 679999999999999999999885432111111       111112246778888887764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=96.23  E-value=0.016  Score=37.99  Aligned_cols=63  Identities=17%  Similarity=0.126  Sum_probs=46.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc-------hHHHHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG-------TDVKDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~-------~~~~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++.+|++.|.|. |.||+.+++.+..-|++|+..++.....       .++ +++-+   .+++..+.+..++.
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l-~~l~~---~~D~v~~~~plt~~  110 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDHPDFDYVSL-EDLFK---QSDVIDLHVPGIEQ  110 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCCTTCEECCH-HHHHH---HCSEEEECCCCCGG
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccchhhhcchhHHHH-HHHHH---hcccceeeeccccc
Confidence            4688999999998 6799999999999999999998854321       122 23322   35777777777654

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.012  Score=38.10  Aligned_cols=103  Identities=16%  Similarity=0.127  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH--------HHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV--------KDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~--------~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      ..+.+|++.|.|. |.||+.+++.+..-|.+|+..++........        .+++-+   .+++..+.+.+++..  .
T Consensus        40 ~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~~~~~~~l~ell~---~sDiv~~~~Plt~~T--~  113 (184)
T d1ygya1          40 TEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQLGIELLSLDDLLA---RADFISVHLPKTPET--A  113 (184)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHHTCEECCHHHHHH---HCSEEEECCCCSTTT--T
T ss_pred             ccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHhhcCceeccHHHHHh---hCCEEEEcCCCCchh--h
Confidence            4688999999986 7899999999999999999988764321111        112222   357888888777543  2


Q ss_pred             HHHH-HHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhh
Q 044688           97 KFAS-DFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATN  137 (147)
Q Consensus        97 ~~~~-~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N  137 (147)
                      .++. +..+.. +.+.++.|+|-   ..-++++++.+.++-+
T Consensus       114 ~lin~~~l~~m-k~~a~lIN~sR---G~iVde~aL~~aL~~~  151 (184)
T d1ygya1         114 GLIDKEALAKT-KPGVIIVNAAR---GGLVDEAALADAITGG  151 (184)
T ss_dssp             TCBCHHHHTTS-CTTEEEEECSC---TTSBCHHHHHHHHHTS
T ss_pred             hhhhHHHHhhh-CCCceEEEecc---hhhhhhHHHHHHHhcC
Confidence            2222 222233 33444444442   2234555555555544

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.98  E-value=0.017  Score=36.35  Aligned_cols=39  Identities=15%  Similarity=0.043  Sum_probs=31.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      ++-+.|. |-+|.++|++|++.|++|.+.+|++++.+.+.
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~   41 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV   41 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh
Confidence            4556655 78999999999999999999999876654433

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=95.97  E-value=0.0069  Score=40.18  Aligned_cols=36  Identities=25%  Similarity=0.380  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      +-..|.|+|.|+ |-.|...|..|+++|++|.++.|.
T Consensus         3 ~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           3 MHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence            345567888887 678999999999999999999875

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.91  E-value=0.032  Score=34.86  Aligned_cols=24  Identities=21%  Similarity=0.248  Sum_probs=21.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG   53 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g   53 (147)
                      -++.|+||+|.+|..++..|++.+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHH
Confidence            478999999999999999998754

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.89  E-value=0.0091  Score=38.35  Aligned_cols=38  Identities=26%  Similarity=0.248  Sum_probs=35.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .+++||.++|.|-|.=+|+.++..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            47999999999999999999999999999999988754

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.88  E-value=0.0053  Score=37.26  Aligned_cols=70  Identities=19%  Similarity=0.216  Sum_probs=46.6

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |.++|.|. +.+|..+++.|.  |..++++..+++..+..    ..    ..+.++.+|.++++.+.++      .....
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~----~~~~~i~Gd~~~~~~L~~a------~i~~A   63 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LR----SGANFVHGDPTRVSDLEKA------NVRGA   63 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HH----TTCEEEESCTTSHHHHHHT------TCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----Hh----cCccccccccCCHHHHHHh------hhhcC
Confidence            46788886 679999999984  55677788776654433    22    2356778999998766542      22356


Q ss_pred             cEEEEcc
Q 044688          110 NILINNA  116 (147)
Q Consensus       110 d~lv~~a  116 (147)
                      +.+|...
T Consensus        64 ~~vi~~~   70 (129)
T d2fy8a1          64 RAVIVNL   70 (129)
T ss_dssp             SEEEECC
T ss_pred             cEEEEec
Confidence            6666554

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.85  E-value=0.0046  Score=38.48  Aligned_cols=77  Identities=13%  Similarity=0.114  Sum_probs=48.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      +++.|+|+ |.+|..+|..|+.++. ++++.+.+++..+-...++....  .........+  .|.+.+           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            56777886 9999999999998874 89999988776555455553210  0112212211  122211           


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ..-|++|.+||...
T Consensus        68 ~~advvvitag~~~   81 (142)
T d1uxja1          68 ANSDVIVVTSGAPR   81 (142)
T ss_dssp             TTCSEEEECCSCC-
T ss_pred             cCCCEEEEeeeccC
Confidence            25899999999753

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.84  E-value=0.02  Score=36.46  Aligned_cols=40  Identities=20%  Similarity=0.191  Sum_probs=32.3

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      +-|. |.|-+|.++++.|++.|++|.+.+|++++.+++.+.
T Consensus         4 IGvI-GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~   43 (178)
T d1pgja2           4 VGVV-GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA   43 (178)
T ss_dssp             EEEE-CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred             EEEE-eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence            3344 457899999999999999999999988777666554

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.82  E-value=0.01  Score=36.82  Aligned_cols=76  Identities=9%  Similarity=0.036  Sum_probs=47.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHHhhC--CCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIVKEI--PTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ++.|+|+ |.+|..+|..++.+|.  ++++.+.+++..+-...++....  ..........+  |.+.+           
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~~~~-----------   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSLL-----------   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CGGGG-----------
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CHHHh-----------
Confidence            4667785 9999999999998873  79999988766544444444311  01222222221  12211           


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ..-|++|..||...
T Consensus        68 ~~adiVvitag~~~   81 (142)
T d1ojua1          68 KGSEIIVVTAGLAR   81 (142)
T ss_dssp             TTCSEEEECCCCCC
T ss_pred             ccccEEEEeccccC
Confidence            25899999998653

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.78  E-value=0.041  Score=34.67  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=48.8

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHH-HHHHHHHHHHh
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLA-SVRKFASDFTT  104 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~  104 (147)
                      -.|.+++|.|+ +++|...+..+...|+ +|+.+++++++++.+ .++     +....+   |..+.+ ...+...... 
T Consensus        27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~-----GAd~~i---n~~~~~~~~~~~~~~~~-   95 (175)
T d1cdoa2          27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVF-----GATDFV---NPNDHSEPISQVLSKMT-   95 (175)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHT-----TCCEEE---CGGGCSSCHHHHHHHHH-
T ss_pred             CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH-HHc-----CCcEEE---cCCCcchhHHHHHHhhc-
Confidence            35688999985 7788888888888776 788888887664432 223     443322   222221 1233333222 


Q ss_pred             cCCCccEEEEcccc
Q 044688          105 KGLPLNILINNAGI  118 (147)
Q Consensus       105 ~~~~id~lv~~ag~  118 (147)
                       .+++|+++.++|.
T Consensus        96 -~~G~d~vid~~G~  108 (175)
T d1cdoa2          96 -NGGVDFSLECVGN  108 (175)
T ss_dssp             -TSCBSEEEECSCC
T ss_pred             -cCCcceeeeecCC
Confidence             2479999999885

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.057  Score=34.79  Aligned_cols=100  Identities=15%  Similarity=0.084  Sum_probs=61.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCcc-------chHHHHHHHhhCCCCeeEEEEecCCCHHHH--
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAA-------GTDVKDAIVKEIPTAKVDVLELDLSSLASV--   95 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~-------~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~--   95 (147)
                      .++.++++.|.|. |.||+.+++.+...|.+|+..++....       .+.+. ++-+   ..++..+.+.++....-  
T Consensus        40 ~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~-ell~---~sDii~i~~plt~~T~~li  114 (188)
T d1sc6a1          40 FEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLS-DLLN---MSDVVSLHVPENPSTKNMM  114 (188)
T ss_dssp             CCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHH-HHHH---HCSEEEECCCSSTTTTTCB
T ss_pred             ccccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHH-HHHh---hccceeecccCCcchhhhc
Confidence            3688999999976 789999999999999999999885431       11223 3322   25788888887753311  


Q ss_pred             -HHHHHHHHhcCCCccEEEEccccCCCCCCCCHHHHHHhhhhh
Q 044688           96 -RKFASDFTTKGLPLNILINNAGIMASPFMLSKDNIELQFATN  137 (147)
Q Consensus        96 -~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~N  137 (147)
                       .+.++.    . +-+.++.|++-   ..-++++++.+.++-+
T Consensus       115 ~~~~l~~----m-k~~a~lIN~aR---G~lvde~aL~~aL~~~  149 (188)
T d1sc6a1         115 GAKEISL----M-KPGSLLINASR---GTVVDIPALADALASK  149 (188)
T ss_dssp             CHHHHHH----S-CTTEEEEECSC---SSSBCHHHHHHHHHTT
T ss_pred             cHHHHhh----C-CCCCEEEEcCc---HHhhhhHHHHHHHHcC
Confidence             233333    3 33444444442   2234556655555544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.65  E-value=0.0098  Score=35.37  Aligned_cols=36  Identities=22%  Similarity=0.151  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .++.++|.|| |-+|..+|..|.+.|.+|.++.|.+.
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            3478888887 78999999999999999999998754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.52  E-value=0.0072  Score=37.75  Aligned_cols=40  Identities=15%  Similarity=0.288  Sum_probs=32.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHH
Q 044688           32 AIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~   72 (147)
                      +.+.|+ |.+|.++++.|++.| .+|++++|++++.+.+.++
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            556666 899999999999887 7999999998776666554

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.012  Score=37.46  Aligned_cols=38  Identities=21%  Similarity=0.309  Sum_probs=34.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ..+.||+++|.|-. -+|+.+|+.+...|++|+++..++
T Consensus        20 ~~l~Gk~v~V~GyG-~iG~g~A~~~rg~G~~V~v~e~dp   57 (163)
T d1li4a1          20 VMIAGKVAVVAGYG-DVGKGCAQALRGFGARVIITEIDP   57 (163)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             ceecCCEEEEeccc-cccHHHHHHHHhCCCeeEeeeccc
Confidence            46899999999985 799999999999999999999876

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.49  E-value=0.03  Score=38.81  Aligned_cols=25  Identities=24%  Similarity=0.307  Sum_probs=22.1

Q ss_pred             CCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           38 SSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        38 ~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ||..|.++|+.+..+|+.|+++++.
T Consensus        45 SGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          45 SGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             chHHHHHHHHHHHHcCCEEEEEecC
Confidence            4678999999999999999998754

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=95.44  E-value=0.0055  Score=39.95  Aligned_cols=40  Identities=23%  Similarity=0.161  Sum_probs=32.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVK   70 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~   70 (147)
                      +++.|.|+ |..|.++|..|++.|.+|.+.+|+++..+.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            45778887 56999999999999999999999866554443

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.43  E-value=0.033  Score=37.09  Aligned_cols=77  Identities=9%  Similarity=0.005  Sum_probs=55.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ..+.++++|=.|++.|.   ++..|++.|.+|+.++.+++-++.+.+.....  +.++.++..|+.+.+           
T Consensus        34 ~~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~--~~~v~~~~~d~~~~~-----------   97 (246)
T d1y8ca_          34 NNLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQ--GLKPRLACQDISNLN-----------   97 (246)
T ss_dssp             TTCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHT--TCCCEEECCCGGGCC-----------
T ss_pred             hCCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhcccccccc--Cccceeeccchhhhc-----------
Confidence            34667899999998775   67788889999999999877666665555444  457888888875532           


Q ss_pred             cCCCccEEEEccc
Q 044688          105 KGLPLNILINNAG  117 (147)
Q Consensus       105 ~~~~id~lv~~ag  117 (147)
                      -.+.+|+++...+
T Consensus        98 ~~~~fD~i~~~~~  110 (246)
T d1y8ca_          98 INRKFDLITCCLD  110 (246)
T ss_dssp             CSCCEEEEEECTT
T ss_pred             ccccccccceeee
Confidence            1236898886533

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.42  E-value=0.12  Score=33.56  Aligned_cols=76  Identities=21%  Similarity=0.190  Sum_probs=53.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .+++|+++|=.|++.|.   ++..++..|+ +|++++.+++.++.+.+.+...  +.+..++..|+.+.           
T Consensus        43 ~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~--~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          43 GDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEF--KGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGG--TTSEEEEESCGGGC-----------
T ss_pred             CCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHc--CCCceEEECchhhh-----------
Confidence            45899999988886552   2333456775 8999999987777776666554  56777888886432           


Q ss_pred             hcCCCccEEEEcccc
Q 044688          104 TKGLPLNILINNAGI  118 (147)
Q Consensus       104 ~~~~~id~lv~~ag~  118 (147)
                        .+++|+||.|-=+
T Consensus       107 --~~~fD~Vi~nPP~  119 (201)
T d1wy7a1         107 --NSRVDIVIMNPPF  119 (201)
T ss_dssp             --CCCCSEEEECCCC
T ss_pred             --CCcCcEEEEcCcc
Confidence              3479999988643

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.39  E-value=0.019  Score=34.46  Aligned_cols=36  Identities=22%  Similarity=0.164  Sum_probs=31.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ..+|.++|.|+ |.+|..+|..|.+.|.+|.++.+.+
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            45688888876 7899999999999999999998864

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.31  E-value=0.011  Score=37.40  Aligned_cols=85  Identities=14%  Similarity=0.152  Sum_probs=52.0

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccCccchHHHHHHH---------h-hCCCCeeEEEEecCCCHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNMAAGTDVKDAIV---------K-EIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~~~~~~~~~~l~---------~-~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      |+++|.|. |-+|..+|+.|.+.|.  +|+..+++.+..+.+.+.-.         . .....++.++.   +-++.+.+
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            46888875 8999999999999985  78888888665544433210         0 00011222211   23556777


Q ss_pred             HHHHHHhcCCCccEEEEcccc
Q 044688           98 FASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~  118 (147)
                      +++++......=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            777776665555566665554

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.013  Score=35.37  Aligned_cols=34  Identities=21%  Similarity=0.296  Sum_probs=30.3

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .|+++|.|+ |-+|.++|..|.+.|.+|.++.|+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            478888888 5799999999999999999999975

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.26  E-value=0.093  Score=31.70  Aligned_cols=74  Identities=16%  Similarity=0.249  Sum_probs=53.9

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEE-EEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFM-AVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      ++.|.|++|-+|+.+++.+.+.+..++. .+++...  .        ....++   ..|++.++...+.++...++  ++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~--------~~~~DV---vIDFS~p~~~~~~l~~~~~~--~~   66 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--E--------LDSPDV---VIDFSSPEALPKTVDLCKKY--RA   66 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--E--------CSCCSE---EEECSCGGGHHHHHHHHHHH--TC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--H--------hccCCE---EEEecCHHHHHHHHHHHHhc--CC
Confidence            4889999999999999998889987654 3443211  0        113343   56999999999998887766  57


Q ss_pred             cEEEEccccC
Q 044688          110 NILINNAGIM  119 (147)
Q Consensus       110 d~lv~~ag~~  119 (147)
                      .+|+-..|+.
T Consensus        67 p~ViGTTG~~   76 (128)
T d1vm6a3          67 GLVLGTTALK   76 (128)
T ss_dssp             EEEECCCSCC
T ss_pred             CEEEEcCCCC
Confidence            7787777753

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.014  Score=34.65  Aligned_cols=35  Identities=26%  Similarity=0.136  Sum_probs=30.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .|.++|.|+ |-+|.++|..|.+.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            467888777 78999999999999999999998753

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=95.22  E-value=0.021  Score=34.25  Aligned_cols=36  Identities=22%  Similarity=0.268  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++++|.|+ |-+|.++|..|.+.|.+|.++.+.+.
T Consensus        29 ~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          29 PQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            4578888887 78999999999999999999998754

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=95.21  E-value=0.014  Score=34.88  Aligned_cols=34  Identities=18%  Similarity=0.254  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++++|.|| |-+|.++|..|++.|.+|.++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578888887 7899999999999999999999864

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.15  E-value=0.092  Score=33.91  Aligned_cols=76  Identities=12%  Similarity=0.031  Sum_probs=52.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+.++|=.|++.|.   ++..|++.|++|+.++.+++.++.+.+.....  +..+..+..|+.+..          ....
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~--~~~~~~~~~d~~~l~----------~~~~  101 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSR--ESNVEFIVGDARKLS----------FEDK  101 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEECCTTSCC----------SCTT
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccc--ccccccccccccccc----------ccCc
Confidence            45678999998766   55677888999999999877666666655554  445667777776532          1123


Q ss_pred             CccEEEEcccc
Q 044688          108 PLNILINNAGI  118 (147)
Q Consensus       108 ~id~lv~~ag~  118 (147)
                      ..|+|+....+
T Consensus       102 ~fD~I~~~~~l  112 (226)
T d1ve3a1         102 TFDYVIFIDSI  112 (226)
T ss_dssp             CEEEEEEESCG
T ss_pred             CceEEEEecch
Confidence            68888876543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.039  Score=35.43  Aligned_cols=39  Identities=21%  Similarity=0.093  Sum_probs=33.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ...++|.++|.|+ |-.|.+.|..|+++|++|.+..+++.
T Consensus        39 ~~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          39 PAVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SCSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            3466799999998 67899999999999999999998753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=95.07  E-value=0.027  Score=33.59  Aligned_cols=37  Identities=27%  Similarity=0.081  Sum_probs=31.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      -.++.++|.|+ |-||..+|..|++.|.+|.++.+...
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            34588888887 78999999999999999999988643

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.05  E-value=0.014  Score=34.65  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=30.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ++.++|.|+ |-+|.++|..|.+.|.+|.++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            477878776 78999999999999999999988643

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.92  E-value=0.015  Score=38.91  Aligned_cols=34  Identities=21%  Similarity=0.195  Sum_probs=29.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      +|+|+|+|+ |--|...|.+|++.|++|.++.++.
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            588888887 6678999999999999999998753

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.91  E-value=0.017  Score=34.69  Aligned_cols=35  Identities=20%  Similarity=0.127  Sum_probs=30.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .|.++|.|+ |-||..+|..|.+.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            478888887 68999999999999999999988643

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.89  E-value=0.11  Score=31.68  Aligned_cols=76  Identities=13%  Similarity=0.143  Sum_probs=51.8

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEE-EEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVFM-AVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~~-~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ++.|.|++|-+|+.+++...+. +..++. +++.. ....    +...  +.+   +..|++.++...+.++...+.  +
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~----~~~~--~~D---vvIDFS~p~~~~~~~~~~~~~--~   68 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL----LTDG--NTE---VVIDFTHPDVVMGNLEFLIDN--G   68 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH----HHTT--TCS---EEEECCCTTTHHHHHHHHHHT--T
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh----hccc--cCC---EEEEcccHHHHHHHHHHHHhc--C
Confidence            4789999999999999988765 566544 34322 1221    1111  334   357999999998888887765  5


Q ss_pred             ccEEEEcccc
Q 044688          109 LNILINNAGI  118 (147)
Q Consensus       109 id~lv~~ag~  118 (147)
                      +.+|+=..|+
T Consensus        69 ~~~ViGTTG~   78 (135)
T d1yl7a1          69 IHAVVGTTGF   78 (135)
T ss_dssp             CEEEECCCCC
T ss_pred             CCEEEecccc
Confidence            7778766665

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=94.84  E-value=0.029  Score=36.48  Aligned_cols=77  Identities=6%  Similarity=0.048  Sum_probs=56.5

Q ss_pred             EecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEE
Q 044688           34 VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILI  113 (147)
Q Consensus        34 itG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv  113 (147)
                      .|-|+||...++.+.+ . +.+|+.++++++.++...+.+...  +.++.++..++.+...+   +...  ..+.+|+++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~--~~r~~~~~~~f~~~~~~---~~~~--~~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF--SDRVSLFKVSYREADFL---LKTL--GIEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG--TTTEEEEECCGGGHHHH---HHHT--TCSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc--cccccchhHHHhhHHHH---HHHc--CCCCcceee
Confidence            6677788888888876 2 469999999988777777766554  56899999998765443   2221  235899999


Q ss_pred             EccccC
Q 044688          114 NNAGIM  119 (147)
Q Consensus       114 ~~ag~~  119 (147)
                      .-.|+.
T Consensus       101 ~DlGvS  106 (192)
T d1m6ya2         101 MDLGVS  106 (192)
T ss_dssp             EECSCC
T ss_pred             eccchh
Confidence            988875

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.087  Score=36.41  Aligned_cols=75  Identities=12%  Similarity=0.123  Sum_probs=50.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .++++||-.|++.|+   ++..+++.|+ +|++++.++. ...+.+..++.....++.++..|+.+...          .
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~-~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~   99 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEI-LYQAMDIIRLNKLEDTITLIKGKIEEVHL----------P   99 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHH-HHHHHHHHHHhCCCccceEEEeeHHHhcC----------c
Confidence            578999999998775   5667778887 7999998754 33444444444334578888888766421          1


Q ss_pred             CCCccEEEEc
Q 044688          106 GLPLNILINN  115 (147)
Q Consensus       106 ~~~id~lv~~  115 (147)
                      ...+|+|+..
T Consensus       100 ~~~~D~Ivse  109 (311)
T d2fyta1         100 VEKVDVIISE  109 (311)
T ss_dssp             CSCEEEEEEC
T ss_pred             cccceEEEEe
Confidence            2368888764

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.78  E-value=0.045  Score=35.50  Aligned_cols=64  Identities=13%  Similarity=0.043  Sum_probs=45.3

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHH----------HHHHHhhCCCCeeEEEEecCCCH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDV----------KDAIVKEIPTAKVDVLELDLSSL   92 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~----------~~~l~~~~~~~~~~~~~~D~~~~   92 (147)
                      .++.|+++.|.|. |.||+.+++.+...|.+|+..++........          .+++-+   .+++..+.+.++..
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~~~~~l~~ll~---~sD~v~l~~plt~~  116 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQATFHDSLDSLLS---VSQFFSLNAPSTPE  116 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHTCEECSSHHHHHH---HCSEEEECCCCCTT
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcccccccCCHHHHHh---hCCeEEecCCCCch
Confidence            4688999999988 6799999999999999999988754322111          112222   35677777777653

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.74  E-value=0.19  Score=29.57  Aligned_cols=82  Identities=7%  Similarity=0.113  Sum_probs=54.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      ||++||.-....+...+...|.+.|++|+....+.   +++.+.+++.  ..++.++-.++-+.+ --.+++++++..+.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~--~~dliilD~~mp~~~-G~e~~~~ir~~~~~   74 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKEL--KPDIVTMDITMPEMN-GIDAIKEIMKIDPN   74 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHH--CCSEEEEECSCGGGC-HHHHHHHHHHHCTT
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhc--cCCEEEEecCCCCCC-HHHHHHHHHHhCCC
Confidence            78999999999999999999999999987655442   3444445444  234444444443443 33566777766777


Q ss_pred             ccEEEEcc
Q 044688          109 LNILINNA  116 (147)
Q Consensus       109 id~lv~~a  116 (147)
                      +.+++..+
T Consensus        75 ~pvi~ls~   82 (118)
T d1u0sy_          75 AKIIVCSA   82 (118)
T ss_dssp             CCEEEEEC
T ss_pred             CcEEEEEc
Confidence            77777654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.67  E-value=0.03  Score=37.56  Aligned_cols=47  Identities=19%  Similarity=0.210  Sum_probs=38.8

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      .++.|++++|-|- |.+|..+|+.|.+.|++|+.++.+.........+
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            4689999999887 6799999999999999999998876655555443

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.67  E-value=0.33  Score=33.47  Aligned_cols=76  Identities=12%  Similarity=0.085  Sum_probs=50.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+|++||-.|++.|+   ++..+++.|+ +|+.++.++. ...+.+...+..-..++.++..|+.+.+          ..
T Consensus        32 ~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~----------~~   97 (316)
T d1oria_          32 FKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVE----------LP   97 (316)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCC----------CS
T ss_pred             CCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHcc----------cc
Confidence            478999999998775   4566777886 7999997653 3444443343322456888888886643          11


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                      ...+|+++..-
T Consensus        98 ~~~~D~ivs~~  108 (316)
T d1oria_          98 VEKVDIIISEW  108 (316)
T ss_dssp             SSCEEEEEECC
T ss_pred             cceeEEEeeee
Confidence            24688887653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=94.65  E-value=0.028  Score=37.36  Aligned_cols=36  Identities=28%  Similarity=0.159  Sum_probs=30.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++.++|+|+|+ |--|..+|..|+++|.+|++..++.
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            45678999998 6678888999999999999999864

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.60  E-value=0.019  Score=34.52  Aligned_cols=36  Identities=25%  Similarity=0.166  Sum_probs=31.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      -++.++|.|+ |-||..+|..|.+.|.+|.++.|++.
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            3478888887 78999999999999999999998754

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.57  E-value=0.027  Score=33.68  Aligned_cols=34  Identities=35%  Similarity=0.346  Sum_probs=29.8

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++.++|.|| |-+|.++|..|.+.|.+|.++.+.+
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            477888877 7899999999999999999998864

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=94.54  E-value=0.16  Score=34.27  Aligned_cols=58  Identities=14%  Similarity=0.084  Sum_probs=42.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ..|+++|=.|+++|+   ++..+++.|++|+.++.++..++.+.+..+..  +.+..++..|+
T Consensus       119 ~~g~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n--~~~~~~~~~d~  176 (254)
T d2nxca1         119 RPGDKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRN--GVRPRFLEGSL  176 (254)
T ss_dssp             CTTCEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHT--TCCCEEEESCH
T ss_pred             CccCEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHc--CCceeEEeccc
Confidence            478899999998876   33456778999999999998887777666554  34555555553

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=94.54  E-value=0.039  Score=36.06  Aligned_cols=70  Identities=21%  Similarity=0.172  Sum_probs=48.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++.|++||=.|++.|+   ++..++..|+ +|+.++.++..++.+.    +.  -.++.++.+|+.+.           
T Consensus        45 ~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar----~N--~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          45 GNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAK----RN--CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             TSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHH----HH--CTTSEEEECCGGGC-----------
T ss_pred             CCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHH----Hc--cccccEEEEehhhc-----------
Confidence            46899999999998773   3345666775 7999998865444333    22  24567888887432           


Q ss_pred             hcCCCccEEEEcc
Q 044688          104 TKGLPLNILINNA  116 (147)
Q Consensus       104 ~~~~~id~lv~~a  116 (147)
                        .+++|+||.|-
T Consensus       105 --~~~fD~Vi~NP  115 (197)
T d1ne2a_         105 --SGKYDTWIMNP  115 (197)
T ss_dssp             --CCCEEEEEECC
T ss_pred             --CCcceEEEeCc
Confidence              25799999874

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=94.53  E-value=0.081  Score=32.00  Aligned_cols=78  Identities=18%  Similarity=0.181  Sum_probs=53.8

Q ss_pred             CCCCEEEEecCCC-chh---------HHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHH
Q 044688           27 ATGLTAIVTGASS-GIG---------AETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVR   96 (147)
Q Consensus        27 ~~~~~~litG~~~-giG---------~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~   96 (147)
                      -..|++||.|++. .||         ...++.|.+.|++++++..|++....-.+ +     ..++.+.++.   .+++.
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d-~-----aD~lYfePlt---~e~v~   75 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE-M-----ADATYIEPIH---WEVVR   75 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG-G-----SSEEECSCCC---HHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh-h-----cceeeeecCC---HHHHH
Confidence            3458899999863 444         45677888899999999999876432111 1     3455555554   57788


Q ss_pred             HHHHHHHhcCCCccEEEEcccc
Q 044688           97 KFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        97 ~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      ++++.-     ++|.++-..|.
T Consensus        76 ~Ii~~E-----~pd~il~~~GG   92 (127)
T d1a9xa3          76 KIIEKE-----RPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHH-----CCSEEECSSSH
T ss_pred             HHHHHh-----CcCCeEEEeee
Confidence            888765     79999877774

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=94.31  E-value=0.062  Score=33.45  Aligned_cols=77  Identities=10%  Similarity=0.112  Sum_probs=49.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhh--CCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKE--IPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .++.|.|+ |.+|..++..|...+. ++++.+++++..+-...++...  ....+......+  +.+.           .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c
Confidence            46778895 9999999998888774 8999999887665555555331  112233232222  2221           1


Q ss_pred             CCccEEEEccccCC
Q 044688          107 LPLNILINNAGIMA  120 (147)
Q Consensus       107 ~~id~lv~~ag~~~  120 (147)
                      ..-|++|.++|...
T Consensus        70 ~~advvvitag~~~   83 (150)
T d1t2da1          70 AGADVVIVTAGFTK   83 (150)
T ss_dssp             TTCSEEEECCSCSS
T ss_pred             CCCcEEEEeccccc
Confidence            26899999999754

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.30  E-value=0.1  Score=34.16  Aligned_cols=81  Identities=12%  Similarity=0.037  Sum_probs=55.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++|-.|++.|--.++.-++...+.+|+.++.+++..+.+.+.+.... -.++.++..|..+..          ...+
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~-~~n~~~~~~d~~~~~----------~~~~  143 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLG-IENVIFVCGDGYYGV----------PEFS  143 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGCC----------GGGC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhc-ccccccccCchHHcc----------cccc
Confidence            56799999988776666555555555699999998877777777666542 346777777754311          1124


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      .+|.++.++++.
T Consensus       144 ~fD~I~~~~~~~  155 (213)
T d1dl5a1         144 PYDVIFVTVGVD  155 (213)
T ss_dssp             CEEEEEECSBBS
T ss_pred             chhhhhhhccHH
Confidence            799999887753

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.26  E-value=0.18  Score=32.12  Aligned_cols=80  Identities=21%  Similarity=0.307  Sum_probs=53.2

Q ss_pred             CCCCCEEE-EecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAI-VTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~l-itG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ...|+.+| +..|+|++|.+    .+++|+ .|+.++.+.+....+.+.+.......++.++..|+      .++++...
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~------~~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDA------NRALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH------HHHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccc------hhhhhhhc
Confidence            46788888 44556767765    445787 69999999877777776665543234677888885      23444444


Q ss_pred             hcCCCccEEEEc
Q 044688          104 TKGLPLNILINN  115 (147)
Q Consensus       104 ~~~~~id~lv~~  115 (147)
                      ....+.|+|+..
T Consensus       109 ~~~~~fDlIflD  120 (182)
T d2fhpa1         109 EEKLQFDLVLLD  120 (182)
T ss_dssp             HTTCCEEEEEEC
T ss_pred             ccCCCcceEEec
Confidence            444578998744

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.22  E-value=0.034  Score=32.92  Aligned_cols=37  Identities=27%  Similarity=0.326  Sum_probs=31.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ..++.++|.|+ |-+|..+|..|.+.|.+|.++.+.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            34688888887 78999999999999999999988643

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.21  E-value=0.076  Score=32.75  Aligned_cols=36  Identities=14%  Similarity=0.119  Sum_probs=29.1

Q ss_pred             CCCEEEEe-cCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           28 TGLTAIVT-GASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~lit-G~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      -++.++|. .+++-||.++|..|++.|.+|.++.+.+
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            34555554 4668999999999999999999998864

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=94.21  E-value=0.051  Score=34.34  Aligned_cols=44  Identities=20%  Similarity=0.095  Sum_probs=35.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      ..|.+||..|++.|   ..+..|+++|++|+.++.++..++.+.+..
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~   62 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTER   62 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHH
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHh
Confidence            46789999999866   367789999999999999977766666554

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.18  E-value=0.025  Score=35.98  Aligned_cols=35  Identities=14%  Similarity=0.113  Sum_probs=29.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~   63 (147)
                      .+|+|+|.|| |-.|...|..|+++|+ .|.+..++.
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            3688889988 6799999999999998 598988864

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.15  E-value=0.032  Score=33.41  Aligned_cols=33  Identities=33%  Similarity=0.333  Sum_probs=28.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ++.++|.|+ |-||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            356778887 789999999999999999998875

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=94.08  E-value=0.34  Score=29.95  Aligned_cols=83  Identities=14%  Similarity=0.143  Sum_probs=54.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC---CHHHHHHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS---SLASVRKFASDFT  103 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~  103 (147)
                      ++|+++.|.+.+||.|--.+..+...|.++.-.      .++..+.+++..|.....-=++|++   +.+...++++.+.
T Consensus         1 P~G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~l------~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~   74 (163)
T d2csua3           1 PRGNKVAIMTNAGGPGVLTADELDKRGLKLATL------EEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLL   74 (163)
T ss_dssp             CSSSEEEEEESCHHHHHHHHHHHHTTTCEECCC------CHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECChHHHHHHHHHHHHcCCccCCC------CHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHH
Confidence            368899999999999999999999999765322      2445556665555332222234543   5666777776655


Q ss_pred             hcCCCccEEEEcc
Q 044688          104 TKGLPLNILINNA  116 (147)
Q Consensus       104 ~~~~~id~lv~~a  116 (147)
                      + .+.+|.++...
T Consensus        75 ~-d~~vd~v~v~~   86 (163)
T d2csua3          75 Q-DPNVDMLIAIC   86 (163)
T ss_dssp             H-STTCSEEEEEE
T ss_pred             c-CCCcCEEEEee
Confidence            4 46788766543

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=94.03  E-value=0.036  Score=35.11  Aligned_cols=39  Identities=13%  Similarity=0.250  Sum_probs=35.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ..+.||+++|.|- |-+|+.+|.++...|++|+++..++-
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            4689999999999 57999999999999999999998863

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=94.01  E-value=0.031  Score=35.77  Aligned_cols=32  Identities=19%  Similarity=0.203  Sum_probs=27.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++.|.|+ |.+|.++|..|++.|.+|.+++|..
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~   33 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEF   33 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecc
Confidence            3567776 7899999999999999999998853

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.98  E-value=0.02  Score=35.74  Aligned_cols=41  Identities=2%  Similarity=0.117  Sum_probs=32.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHH
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAI   73 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l   73 (147)
                      +.+. |+|-+|.++++.|.+.|+++++++|+.++.+++.+..
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            4455 4588999999999999999999999877766665543

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.89  E-value=0.31  Score=30.83  Aligned_cols=77  Identities=21%  Similarity=0.150  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+.++|=.|++.|   .++..|++.+.+|+.++.+++.++.+.+.+++..-..++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            5778887887765   33445666778999999998888888777766532357888888741          1122335


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      .+|.++.+.+
T Consensus       100 ~~D~v~~~~~  109 (186)
T d1l3ia_         100 DIDIAVVGGS  109 (186)
T ss_dssp             CEEEEEESCC
T ss_pred             CcCEEEEeCc
Confidence            6888876643

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.87  E-value=0.088  Score=34.78  Aligned_cols=73  Identities=15%  Similarity=0.042  Sum_probs=51.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      ..++++|=.|++.|   .++..|++.|++|+.++.+++-++.+.+.+...  +.++.++..|+.+..           -.
T Consensus        40 ~~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~--~~~i~~~~~d~~~l~-----------~~  103 (251)
T d1wzna1          40 REVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKER--NLKIEFLQGDVLEIA-----------FK  103 (251)
T ss_dssp             SCCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--TCCCEEEESCGGGCC-----------CC
T ss_pred             CCCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccc--cccchheehhhhhcc-----------cc
Confidence            34578999998876   345678889999999999876666666655554  446788888875532           01


Q ss_pred             CCccEEEEc
Q 044688          107 LPLNILINN  115 (147)
Q Consensus       107 ~~id~lv~~  115 (147)
                      +..|.++..
T Consensus       104 ~~fD~I~~~  112 (251)
T d1wzna1         104 NEFDAVTMF  112 (251)
T ss_dssp             SCEEEEEEC
T ss_pred             cccchHhhh
Confidence            357877765

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=93.85  E-value=0.21  Score=30.72  Aligned_cols=84  Identities=14%  Similarity=0.067  Sum_probs=51.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCC----CeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPT----AKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      +-+.|. |-+|..+|++|++.|+.+ ..+|+.++..++.+........    .....+...+.+.+.+......+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445666 789999999999888754 5777776665555543211000    1222233345556677777777766666


Q ss_pred             CccEEEEccc
Q 044688          108 PLNILINNAG  117 (147)
Q Consensus       108 ~id~lv~~ag  117 (147)
                      +-.++|.++-
T Consensus        81 ~~~~iid~sT   90 (156)
T d2cvza2          81 EGTYWVDATS   90 (156)
T ss_dssp             TTEEEEECSC
T ss_pred             cccccccccc
Confidence            6666666654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.79  E-value=0.043  Score=33.96  Aligned_cols=34  Identities=18%  Similarity=0.222  Sum_probs=27.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAG   66 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~   66 (147)
                      +-|.|. |-+|.++++.|.++|++|+..+++.+..
T Consensus         3 IgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~   36 (152)
T d1i36a2           3 VGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPS   36 (152)
T ss_dssp             EEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHH
T ss_pred             EEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHH
Confidence            445544 8999999999999999999888776544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.79  E-value=0.035  Score=37.76  Aligned_cols=36  Identities=22%  Similarity=0.211  Sum_probs=30.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      -+.|.|+|+|+ |--|...|..|++.|.+|.++.++.
T Consensus        28 ~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35578999998 5678999999999999999998754

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.78  E-value=0.11  Score=34.17  Aligned_cols=79  Identities=20%  Similarity=0.185  Sum_probs=57.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .+.++|-.|+++|--.++.-+|+  |.+|+.+.++++-.+...+.+.+.. -.++.++..|..+-          ....+
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g-~~nv~~~~gd~~~g----------~~~~~  144 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAG-VKNVHVILGDGSKG----------FPPKA  144 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTT-CCSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcC-CceeEEEECccccC----------CcccC
Confidence            67799999999988888877776  4679999988665565666565542 46888999997531          12235


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      +.|.++.++++.
T Consensus       145 pfD~Iiv~~a~~  156 (215)
T d1jg1a_         145 PYDVIIVTAGAP  156 (215)
T ss_dssp             CEEEEEECSBBS
T ss_pred             cceeEEeecccc
Confidence            899999888764

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=93.77  E-value=0.039  Score=33.23  Aligned_cols=35  Identities=17%  Similarity=0.095  Sum_probs=30.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .++.++|.|+ |-||.++|..|.+.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4578888887 7899999999999999999998864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.028  Score=36.31  Aligned_cols=32  Identities=16%  Similarity=0.119  Sum_probs=27.3

Q ss_pred             CEEEEecCCCchhH-----HHHHHHHHCCCEEEEEEc
Q 044688           30 LTAIVTGASSGIGA-----ETTRVLALRGVHVFMAVR   61 (147)
Q Consensus        30 ~~~litG~~~giG~-----~~a~~l~~~g~~v~~~~r   61 (147)
                      |+++|||.+.|+|+     .+|..|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            78999999989996     567788899999988763

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.63  E-value=0.038  Score=41.52  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=29.2

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVR   61 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r   61 (147)
                      +.+.+|+|.|+ ||+|..+++.|+..|. ++.+++.
T Consensus        23 L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          23 LESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            56788999987 7899999999999996 7888754

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=93.55  E-value=0.034  Score=37.26  Aligned_cols=31  Identities=23%  Similarity=0.223  Sum_probs=27.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++|+|+ |-.|.++|.+|+++|.+|++++++.
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 7899999999999999999998854

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.45  E-value=0.093  Score=34.53  Aligned_cols=37  Identities=24%  Similarity=0.325  Sum_probs=31.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ...+|.++|.|+ |-.|...|..|+++|++|.++.++.
T Consensus        46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            357799999998 5678999999999999999998754

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=93.42  E-value=0.052  Score=33.68  Aligned_cols=35  Identities=23%  Similarity=0.320  Sum_probs=29.2

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC--EEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV--HVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~--~v~~~~r~~   63 (147)
                      .||+++|.|+ |-.|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999998 5679999999999874  788887765

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=93.36  E-value=0.34  Score=32.94  Aligned_cols=76  Identities=17%  Similarity=0.181  Sum_probs=49.3

Q ss_pred             CEEEEecCCCc-hhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSG-IGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      +.++-.|+++| |+.++++   ...++|++++.+++.++-+........-..++.+...|+.+.         .....+.
T Consensus       112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~~  179 (271)
T d1nv8a_         112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFAS  179 (271)
T ss_dssp             CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTTT
T ss_pred             cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccCc
Confidence            45565555555 5544442   356799999999888777766665542234677777787543         2334578


Q ss_pred             ccEEEEccc
Q 044688          109 LNILINNAG  117 (147)
Q Consensus       109 id~lv~~ag  117 (147)
                      +|++|.|-=
T Consensus       180 fDlIVsNPP  188 (271)
T d1nv8a_         180 IEMILSNPP  188 (271)
T ss_dssp             CCEEEECCC
T ss_pred             ccEEEEccc
Confidence            999999953

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=93.36  E-value=0.076  Score=32.14  Aligned_cols=36  Identities=19%  Similarity=0.188  Sum_probs=31.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      .+++++|.|+ |-+|.++|..|.+.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccc
Confidence            4688888877 78999999999999999999988643

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.30  E-value=0.39  Score=30.73  Aligned_cols=44  Identities=16%  Similarity=0.130  Sum_probs=35.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKD   71 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~   71 (147)
                      .....++|.|+ |-.|..-++.....|++|.+.+.+.+..+++..
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~   70 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES   70 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence            34568889887 678888888888999999999998877665554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.73  E-value=0.084  Score=36.63  Aligned_cols=35  Identities=26%  Similarity=0.265  Sum_probs=29.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      +.|.++|.|| |--|..+|..|++.|.+|.++..+.
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            3588889988 5678899999999999999998764

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.50  E-value=0.058  Score=35.03  Aligned_cols=35  Identities=17%  Similarity=0.072  Sum_probs=28.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      +.|. |.|-+|..+|..|++.|++|++.+.+.+..+
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~   37 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKID   37 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHH
Confidence            4555 5588999999999999999999998765443

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.20  E-value=0.73  Score=28.43  Aligned_cols=33  Identities=21%  Similarity=0.276  Sum_probs=26.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC--CCEEEEEEcc
Q 044688           30 LTAIVTGASSGIGAETTRVLALR--GVHVFMAVRN   62 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~   62 (147)
                      |++.|.|+||.||.....-..+.  .++|+.+.-+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            57899999999999998888775  4677665543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.08  E-value=0.72  Score=28.09  Aligned_cols=77  Identities=14%  Similarity=0.174  Sum_probs=50.2

Q ss_pred             CCCCCEEEEecC-CCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           26 DATGLTAIVTGA-SSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        26 ~~~~~~~litG~-~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .++|+.+|=.|+ +|.+|.    +.+++|+ +|+.++.+++..+.+.+.+.......++.++..|+.+      +++   
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---
Confidence            467888885555 455555    3456776 8999999988777777666654333568888887422      222   


Q ss_pred             hcCCCccEEEEc
Q 044688          104 TKGLPLNILINN  115 (147)
Q Consensus       104 ~~~~~id~lv~~  115 (147)
                      ......|+++.+
T Consensus        79 ~~~~~fDiIf~D   90 (152)
T d2esra1          79 CLTGRFDLVFLD   90 (152)
T ss_dssp             HBCSCEEEEEEC
T ss_pred             ccccccceeEec
Confidence            223578988765

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=92.00  E-value=0.21  Score=30.92  Aligned_cols=46  Identities=26%  Similarity=0.278  Sum_probs=32.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCccchHHHHHHHh
Q 044688           29 GLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAAGTDVKDAIVK   75 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~~~~~~~~l~~   75 (147)
                      .|++.|.|+||.||.....-+.+.  .++|+++.-+. ..+.+.+...+
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~e   49 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKR   49 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHH
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHh
Confidence            589999999999999998888765  57777655442 23344444433

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.83  E-value=0.28  Score=29.23  Aligned_cols=77  Identities=17%  Similarity=0.112  Sum_probs=51.9

Q ss_pred             CCCEEEEecCCC-chh---------HHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHH
Q 044688           28 TGLTAIVTGASS-GIG---------AETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRK   97 (147)
Q Consensus        28 ~~~~~litG~~~-giG---------~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~   97 (147)
                      ..|++||.|++. .||         ...++.|.+.|++++++..|++....-.+ +     ..++.+.++   ..+.+.+
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d-~-----aD~lYfepl---t~e~v~~   73 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD-T-----SDRLYFEPV---TLEDVLE   73 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT-S-----SSEEECCCC---SHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh-h-----cCceEEccC---CHHHHHH
Confidence            457899999863 444         45677888899999999999875431111 0     235544444   3567877


Q ss_pred             HHHHHHhcCCCccEEEEcccc
Q 044688           98 FASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        98 ~~~~~~~~~~~id~lv~~ag~  118 (147)
                      +++.-     ++|.++-..|.
T Consensus        74 Ii~~E-----~p~~ii~~~GG   89 (121)
T d1a9xa4          74 IVRIE-----KPKGVIVQYGG   89 (121)
T ss_dssp             HHHHH-----CCSEEECSSST
T ss_pred             HHHHh-----CCCEEEeehhh
Confidence            77765     78999877764

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.77  E-value=0.13  Score=34.82  Aligned_cols=35  Identities=17%  Similarity=0.153  Sum_probs=31.0

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV   60 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~   60 (147)
                      ..++|+++.|-| .|.+|..+++.|.+.|++|+.++
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            468999999999 58899999999999999988764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.32  Score=31.96  Aligned_cols=82  Identities=17%  Similarity=0.091  Sum_probs=58.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC----CCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP----TAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      .|.++|-.|+++|--.++.-++.....+|+.++++++-.+.+.+.+.+...    ..++.+...|..+.          .
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~----------~  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----------Y  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----------C
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc----------c
Confidence            567999999999988888888887777999999988777766666654321    23566777775321          1


Q ss_pred             hcCCCccEEEEccccC
Q 044688          104 TKGLPLNILINNAGIM  119 (147)
Q Consensus       104 ~~~~~id~lv~~ag~~  119 (147)
                      ...+.+|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124789999888754

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.62  E-value=0.14  Score=34.45  Aligned_cols=40  Identities=25%  Similarity=0.267  Sum_probs=32.6

Q ss_pred             CCCCCCEEEEecCCCchhHHH-----HHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAET-----TRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~-----a~~l~~~g~~v~~~~r~~~   64 (147)
                      +...++.++|+.|=||.|+..     |..|+++|.+|.+++.++.
T Consensus        15 ~~~~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          15 IARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             HHTTSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             hhcCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            335677788887799999865     7899999999999998864

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.52  E-value=0.21  Score=29.49  Aligned_cols=83  Identities=17%  Similarity=0.113  Sum_probs=50.5

Q ss_pred             CEEEEecCC---CchhHHHHHHHHHCCCEEEEEEccCccchH--HHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           30 LTAIVTGAS---SGIGAETTRVLALRGVHVFMAVRNMAAGTD--VKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~---~giG~~~a~~l~~~g~~v~~~~r~~~~~~~--~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      |.+.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...-  ....+.+.  ...+..+. =....+.+.+++++..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~l--p~~~D~vv-i~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVREL--PKDVDVIV-FVVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGS--CTTCCEEE-ECSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhc--cccceEEE-EEeCHHHHHHHHHHHHh
Confidence            678899988   578999999999999999988765443211  11122221  11222211 12356677778887766


Q ss_pred             cCCCccEEEEccc
Q 044688          105 KGLPLNILINNAG  117 (147)
Q Consensus       105 ~~~~id~lv~~ag  117 (147)
                      .  ++..++...|
T Consensus        79 ~--g~k~v~~~~g   89 (116)
T d1y81a1          79 A--GFKKLWFQPG   89 (116)
T ss_dssp             T--TCCEEEECTT
T ss_pred             c--CCceEEeccc
Confidence            5  3555555444

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.50  E-value=0.096  Score=33.60  Aligned_cols=31  Identities=19%  Similarity=0.213  Sum_probs=26.7

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      |+|+|+ |--|...|..|+++|.+|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            677775 7788999999999999999998864

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=91.45  E-value=0.093  Score=35.18  Aligned_cols=31  Identities=29%  Similarity=0.395  Sum_probs=26.7

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      -++|.|+ |-.|..+|.+|+++|.+|+++.+.
T Consensus         5 DvvIIGa-Gi~Gls~A~~La~~G~~V~viE~~   35 (281)
T d2gf3a1           5 DVIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF   35 (281)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            3677776 678999999999999999999874

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.36  E-value=0.65  Score=32.04  Aligned_cols=76  Identities=17%  Similarity=0.126  Sum_probs=49.3

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+|++||-.|++.|+   ++..+++.|+ .|++++.++ .+..+.+..++.....++.++..|+.+..          ..
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~----------~~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH----------LP  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC----------CS
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc----------Cc
Confidence            478999999998774   4556677887 788888764 33334444444433457888888876542          11


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                      ...+|+++..-
T Consensus       103 ~~~~D~i~se~  113 (328)
T d1g6q1_         103 FPKVDIIISEW  113 (328)
T ss_dssp             SSCEEEEEECC
T ss_pred             ccceeEEEEEe
Confidence            23688887653

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.35  E-value=0.17  Score=33.95  Aligned_cols=34  Identities=24%  Similarity=0.280  Sum_probs=30.5

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAV   60 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~   60 (147)
                      +++|++++|-| -|.+|..+|+.|.+.|++|+.++
T Consensus        28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            68999999997 58899999999999999988765

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=91.13  E-value=0.32  Score=32.09  Aligned_cols=76  Identities=12%  Similarity=-0.025  Sum_probs=50.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGL  107 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~  107 (147)
                      .|.++|-.|++.|--.++   |++.+.+|+.+.++++..+.+.+.+. .  ..++.++..|...-          ....+
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~--~~nv~~~~~d~~~g----------~~~~~  133 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-Y--YNNIKLILGDGTLG----------YEEEK  133 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-T--CSSEEEEESCGGGC----------CGGGC
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-c--ccccccccCchhhc----------chhhh
Confidence            667899999988755444   45556799999988665555444333 2  35788888886431          11135


Q ss_pred             CccEEEEccccC
Q 044688          108 PLNILINNAGIM  119 (147)
Q Consensus       108 ~id~lv~~ag~~  119 (147)
                      +.|.++.++++.
T Consensus       134 pfD~Iiv~~a~~  145 (224)
T d1vbfa_         134 PYDRVVVWATAP  145 (224)
T ss_dssp             CEEEEEESSBBS
T ss_pred             hHHHHHhhcchh
Confidence            799999888753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=91.09  E-value=0.1  Score=35.36  Aligned_cols=32  Identities=19%  Similarity=0.297  Sum_probs=26.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~   63 (147)
                      .|+|.|+ |-+|.++|.+|+++|. +|.+++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            3677777 6899999999999996 699998763

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=90.81  E-value=0.24  Score=34.20  Aligned_cols=36  Identities=19%  Similarity=0.142  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVR   61 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r   61 (147)
                      ..+.|+++.|-|- |.+|..+|+.|.+.|++|+.++-
T Consensus        32 ~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          32 PGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            4689999999887 78999999999999999887653

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=90.81  E-value=0.25  Score=30.12  Aligned_cols=86  Identities=12%  Similarity=0.102  Sum_probs=55.8

Q ss_pred             CCCEEEEecCC---CchhHHHHHHHHHCCCEEEEEEccCccch--HHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHH
Q 044688           28 TGLTAIVTGAS---SGIGAETTRVLALRGVHVFMAVRNMAAGT--DVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDF  102 (147)
Q Consensus        28 ~~~~~litG~~---~giG~~~a~~l~~~g~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  102 (147)
                      +.|.+.|.|++   +..|..+.+.|.+.|++|+.+....+...  .....+.+.  ...+..+.. +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dl--p~~iD~v~i-~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDI--PDKIEVVDL-FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGC--SSCCSEEEE-CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCccccccccc--CccceEEEE-EeCHHHHHHHHHHH
Confidence            57899999998   68999999999999999999877643321  111222221  112222111 14577788888888


Q ss_pred             HhcCCCccEEEEcccc
Q 044688          103 TTKGLPLNILINNAGI  118 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~  118 (147)
                      .+.  ++..++...|.
T Consensus        95 ~~~--g~k~v~~~~G~  108 (139)
T d2d59a1          95 IKK--GAKVVWFQYNT  108 (139)
T ss_dssp             HHH--TCSEEEECTTC
T ss_pred             HHh--CCCEEEEeccc
Confidence            775  45666666664

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=90.71  E-value=0.19  Score=32.63  Aligned_cols=34  Identities=21%  Similarity=0.302  Sum_probs=29.2

Q ss_pred             CCEEEEecCCCchhH-----HHHHHHHHCCCEEEEEEcc
Q 044688           29 GLTAIVTGASSGIGA-----ETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        29 ~~~~litG~~~giG~-----~~a~~l~~~g~~v~~~~r~   62 (147)
                      +|++.|+|+-||.|+     .+|..|++.|.+|.+++-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            688999999999996     5677888899999999865

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=90.51  E-value=0.81  Score=25.78  Aligned_cols=72  Identities=11%  Similarity=0.073  Sum_probs=45.8

Q ss_pred             CCCCEEEEecCCCchh-HHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIG-AETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG-~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      -..|.+.+.|-+| +| .++|+.|.++|+.|...++....   ..+.+.+.  +..+.  ..+-  ++.+          
T Consensus         6 ~~~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~---~~~~L~~~--Gi~v~--~g~~--~~~i----------   65 (96)
T d1p3da1           6 RRVQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGV---VTQRLAQA--GAKIY--IGHA--EEHI----------   65 (96)
T ss_dssp             TTCCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSH---HHHHHHHT--TCEEE--ESCC--GGGG----------
T ss_pred             hhCCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCCh---hhhHHHHC--CCeEE--ECCc--cccC----------
Confidence            3457788888754 44 67899999999999999987432   23344443  44332  2221  2111          


Q ss_pred             CCCccEEEEccccC
Q 044688          106 GLPLNILINNAGIM  119 (147)
Q Consensus       106 ~~~id~lv~~ag~~  119 (147)
                       ...|.+|.+.++.
T Consensus        66 -~~~d~vV~S~AI~   78 (96)
T d1p3da1          66 -EGASVVVVSSAIK   78 (96)
T ss_dssp             -TTCSEEEECTTSC
T ss_pred             -CCCCEEEECCCcC
Confidence             2579999998875

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.50  E-value=0.14  Score=33.57  Aligned_cols=43  Identities=14%  Similarity=0.048  Sum_probs=34.5

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDA   72 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~   72 (147)
                      ..+.+||..|++.|   ..+..|++.|++|+.++.++..++.+.+.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~   86 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTE   86 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHH
Confidence            46789999999876   45788899999999999987766655544

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=90.44  E-value=0.73  Score=29.10  Aligned_cols=45  Identities=18%  Similarity=0.143  Sum_probs=32.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHH
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIV   74 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~   74 (147)
                      +.++.+|=.|++.|  . .+..|+++|++|+.++.+++.++.+.....
T Consensus        29 ~~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~   73 (198)
T d2i6ga1          29 VAPGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKA   73 (198)
T ss_dssp             SCSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred             CCCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhh
Confidence            45678998998644  3 456788899999999998776665554433

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.12  E-value=0.19  Score=32.74  Aligned_cols=60  Identities=13%  Similarity=0.128  Sum_probs=37.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .|.+||=.|++.|.-......+...| +|+.++.++..++.+.+.....   .++.++..|..+
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~---~ni~~i~~d~~~  115 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASK  115 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc---CCceEEEeeccC
Confidence            46899999998775443333344445 9999999987777766554432   234444444443

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.08  E-value=2  Score=29.58  Aligned_cols=78  Identities=18%  Similarity=0.112  Sum_probs=51.0

Q ss_pred             CCCEEE-EecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAI-VTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~l-itG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      +++.+| +..++|+++.+    ++..|++|+.++.+...++.+.+.+.... ...++.++..|+      .+++++...+
T Consensus       132 ~~~rVLdlf~~tG~~sl~----aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~------~~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLV----AAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDA------MKFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHH----HHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCH------HHHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHH----HHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCH------HHhHHHHhhc
Confidence            467787 44445655554    44578999999988877777766555432 134678888775      3344444445


Q ss_pred             CCCccEEEEc
Q 044688          106 GLPLNILINN  115 (147)
Q Consensus       106 ~~~id~lv~~  115 (147)
                      ..+.|+||..
T Consensus       202 ~~~fD~IilD  211 (309)
T d2igta1         202 GSTYDIILTD  211 (309)
T ss_dssp             TCCBSEEEEC
T ss_pred             CCCCCEEEEC
Confidence            5679999876

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.93  E-value=0.25  Score=32.88  Aligned_cols=35  Identities=23%  Similarity=0.299  Sum_probs=29.2

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEE
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAV   60 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~   60 (147)
                      .+++++++.|-| .|.+|..+++.|.+ .|++|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            468899998886 68899999999985 599988765

>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Transcription-repair coupling factor, TRCF
species: Escherichia coli [TaxId: 562]

Probab=89.90  E-value=1.1  Score=29.11  Aligned_cols=64  Identities=16%  Similarity=0.322  Sum_probs=51.8

Q ss_pred             HCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEEccc
Q 044688           51 LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAG  117 (147)
Q Consensus        51 ~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag  117 (147)
                      .+|..|+.++..-+..++..+.+.+.+|+.++..++..+.+. ..++.+.+..+  |.+|+||...=
T Consensus        29 ~rGgQvy~V~p~I~~~e~~~~~l~~~~p~~~i~~lHGkm~~~-eke~im~~F~~--g~~~ILv~Ttv   92 (211)
T d2eyqa5          29 LRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRER-ELERVMNDFHH--QRFNVLVCTTI   92 (211)
T ss_dssp             TTTCEEEEECCCSSCHHHHHHHHHHHCTTSCEEECCSSCCHH-HHHHHHHHHHT--TSCCEEEESST
T ss_pred             HcCCeEEEEEcCccchhhHHHHHHHhCCceEEEEEEeccCHH-HHHHHHHHHHc--CCcceEEEehh
Confidence            468899999988888888999999999999999999998655 46667776654  57999998763

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=89.77  E-value=0.74  Score=29.53  Aligned_cols=59  Identities=10%  Similarity=-0.064  Sum_probs=39.4

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      +.++|=.|++.|.-   +..|++.|.+|+.++.+++.++.+.+.+.... ..++.++..|..+
T Consensus        16 ~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~-~~~i~~~~~d~~~   74 (231)
T d1vl5a_          16 NEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNG-HQQVEYVQGDAEQ   74 (231)
T ss_dssp             CCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTT-CCSEEEEECCC-C
T ss_pred             cCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhcccccc-ccccccccccccc
Confidence            57888888876643   45677889999999998776665555444331 3456666666654

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.64  E-value=1.4  Score=27.16  Aligned_cols=87  Identities=17%  Similarity=0.217  Sum_probs=59.7

Q ss_pred             CCCCEEEE--ecCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHH
Q 044688           27 ATGLTAIV--TGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDF  102 (147)
Q Consensus        27 ~~~~~~li--tG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~  102 (147)
                      .+||.++=  -|..-.||..++..+++ .|++|+-++.+.. .+++.+...+.  +..+..+.+-++ ....+.++++.+
T Consensus         5 ~~gkivi~tv~gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~p-~e~~~~~~~~~--~~d~i~lS~l~~~~~~~~~~~~~~l   81 (156)
T d3bula2           5 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVP-AEKILRTAKEV--NADLIGLSGLITPSLDEMVNVAKEM   81 (156)
T ss_dssp             CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBC-HHHHHHHHHHH--TCSEEEEECCSTHHHHHHHHHHHHH
T ss_pred             cCCEEEEEeeCCChhhHHHHHHHHHHHHCCCEEEECCCCCC-HHHHHHHHHhh--CCCEEEEecccccchHHHHHHHHHH
Confidence            44554432  24456899999999987 5899998887643 45666666665  567888888765 567778888888


Q ss_pred             HhcCCCccEEEEcc
Q 044688          103 TTKGLPLNILINNA  116 (147)
Q Consensus       103 ~~~~~~id~lv~~a  116 (147)
                      .+...++-++|-.+
T Consensus        82 ~~~g~~~~vivGG~   95 (156)
T d3bula2          82 ERQGFTIPLLIGGA   95 (156)
T ss_dssp             HHTTCCSCEEEEST
T ss_pred             HhccccceEEEecc
Confidence            87755555554433

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=89.61  E-value=0.22  Score=29.18  Aligned_cols=35  Identities=14%  Similarity=0.162  Sum_probs=27.2

Q ss_pred             CCEEEEecCCCchhHHHHHHHHH---CCCEEEEEEccCc
Q 044688           29 GLTAIVTGASSGIGAETTRVLAL---RGVHVFMAVRNMA   64 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~---~g~~v~~~~r~~~   64 (147)
                      ++.++|.|+ |.+|.++|..|.+   .|.+|.++.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            578888888 8899999976665   4568999988643

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=89.38  E-value=0.22  Score=30.95  Aligned_cols=31  Identities=16%  Similarity=0.149  Sum_probs=24.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEE
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAV   60 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~   60 (147)
                      ++.++|.|+ |.+|..+|..|.+.|.++.++.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            567888877 7899999999999998654443

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=89.37  E-value=1.5  Score=27.19  Aligned_cols=77  Identities=14%  Similarity=0.136  Sum_probs=45.3

Q ss_pred             CCCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..|+.+|=.|++ |.+|    -+.+++|++|+.++.+++..+.+.+.++...-..++  ...|   .+.   +.......
T Consensus        40 ~~g~~vLDl~~G~G~~~----i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v--~~~~---~d~---~~~~~~~~  107 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGAVG----LEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARV--VALP---VEV---FLPEAKAQ  107 (171)
T ss_dssp             TTCCEEEEETCSSCHHH----HHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEE--ECSC---HHH---HHHHHHHT
T ss_pred             cCCCeEEEeccccchhh----hhhhhccchhhhcccCHHHHhhhhHHHHhhccccce--eeee---hhc---cccccccc
Confidence            467777755544 4444    356678999999999888777776666654222232  2222   221   22333334


Q ss_pred             CCCccEEEEc
Q 044688          106 GLPLNILINN  115 (147)
Q Consensus       106 ~~~id~lv~~  115 (147)
                      ..++|+++.+
T Consensus       108 ~~~fD~If~D  117 (171)
T d1ws6a1         108 GERFTVAFMA  117 (171)
T ss_dssp             TCCEEEEEEC
T ss_pred             CCccceeEEc
Confidence            4579999865

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.35  E-value=0.21  Score=32.27  Aligned_cols=38  Identities=24%  Similarity=0.370  Sum_probs=31.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ..++||.|+|.|++.. |..+|..+++.++.++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~S-a~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGSS-GIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSHH-HHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCcc-HHHHHHHHHhhhcccccccccc
Confidence            3589999999999754 7999999999999888877654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.35  E-value=0.26  Score=32.92  Aligned_cols=33  Identities=21%  Similarity=0.221  Sum_probs=26.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      .++|+|+|+ |--|+..|..|.+.|.+|.++..+
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~   37 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEAR   37 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            456888887 566789999999999999998654

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.15  E-value=0.25  Score=33.69  Aligned_cols=32  Identities=19%  Similarity=0.179  Sum_probs=22.0

Q ss_pred             CEEEEecC-CCch---hHHHHHHHHHCCCEEEEEEc
Q 044688           30 LTAIVTGA-SSGI---GAETTRVLALRGVHVFMAVR   61 (147)
Q Consensus        30 ~~~litG~-~~gi---G~~~a~~l~~~g~~v~~~~r   61 (147)
                      |+++|+++ +||-   ..+++++|.++|++|..++.
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~   36 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGT   36 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEe
Confidence            45666654 3332   45789999999999977664

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=89.14  E-value=0.31  Score=28.36  Aligned_cols=35  Identities=26%  Similarity=0.255  Sum_probs=27.5

Q ss_pred             CCEEEEecCCCchhHHHHHHHHH---CCCEEEEEEccCc
Q 044688           29 GLTAIVTGASSGIGAETTRVLAL---RGVHVFMAVRNMA   64 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~---~g~~v~~~~r~~~   64 (147)
                      ++.++|.|+ |.+|.++|..|.+   .|.+|.++.+.+.
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence            478888888 6799999976654   4889999988643

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=89.04  E-value=0.21  Score=32.66  Aligned_cols=31  Identities=23%  Similarity=0.234  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++|.|+ |--|...|..|++.|.+|+++.++.
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677777 5688899999999999999998764

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.98  E-value=0.26  Score=31.87  Aligned_cols=34  Identities=24%  Similarity=0.254  Sum_probs=28.6

Q ss_pred             CEEEEecCCCchhH-----HHHHHHHHCCCEEEEEEccC
Q 044688           30 LTAIVTGASSGIGA-----ETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        30 ~~~litG~~~giG~-----~~a~~l~~~g~~v~~~~r~~   63 (147)
                      |++.|+++-||.|+     .+|..|++.|.+|.+++.+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            68899999999995     56778888999999998764

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=88.94  E-value=2.4  Score=29.03  Aligned_cols=80  Identities=15%  Similarity=0.110  Sum_probs=52.3

Q ss_pred             CCCCEEEEecC-CCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGA-SSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~-~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+|+++|=.++ +|+++.++    +..+.+|+.++.++..++.+.+.+.... -.++.++..|+.+      +.+.....
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ng-l~~~~~i~~d~~~------~~~~~~~~  212 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNG-LGNVRVLEANAFD------LLRRLEKE  212 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTT-CTTEEEEESCHHH------HHHHHHHT
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcC-CCCcceeeccHHH------HhhhhHhh
Confidence            57888886555 45555443    4456799999999887777776666542 2357788887533      22333334


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                      ...+|.||.+.-
T Consensus       213 ~~~fD~Vi~DpP  224 (318)
T d1wxxa2         213 GERFDLVVLDPP  224 (318)
T ss_dssp             TCCEEEEEECCC
T ss_pred             hcCCCEEEEcCC
Confidence            457999998753

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=88.82  E-value=0.17  Score=33.33  Aligned_cols=32  Identities=19%  Similarity=0.230  Sum_probs=27.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .|+|+|+ |--|...|.+|+++|++|.++.++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            3778887 6788999999999999999998753

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=88.76  E-value=0.76  Score=30.71  Aligned_cols=63  Identities=16%  Similarity=0.220  Sum_probs=45.2

Q ss_pred             CCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGASSG-IGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .|.++|=.|+++| +...+++.+...| +|+.++++++..+.+.+.+.+.....++.+...|+.+
T Consensus        85 pG~rVLEiG~GsG~lt~~la~~v~~~g-~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~  148 (250)
T d1yb2a1          85 PGMDILEVGVGSGNMSSYILYALNGKG-TLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD  148 (250)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHTTSS-EEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT
T ss_pred             CcCEEEEeeeeCcHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeec
Confidence            5678998888755 5667777665444 9999999988777777777664334567777777654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=88.61  E-value=1.7  Score=26.97  Aligned_cols=76  Identities=8%  Similarity=0.095  Sum_probs=40.2

Q ss_pred             CEEEEecCCCchhHHHHHHHHHC-----CCEEEEEEccCccchHHHHHHH---hhCCCCeeEE-EEecCCCHHHHHHHHH
Q 044688           30 LTAIVTGASSGIGAETTRVLALR-----GVHVFMAVRNMAAGTDVKDAIV---KEIPTAKVDV-LELDLSSLASVRKFAS  100 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~-----g~~v~~~~r~~~~~~~~~~~l~---~~~~~~~~~~-~~~D~~~~~~~~~~~~  100 (147)
                      .++.|.||++.....++..++..     +.++++.+.++++++.....+.   +.. +..... ...|      ..+.+ 
T Consensus         4 ~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d------~~eal-   75 (167)
T d1u8xx1           4 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREK-APDIEFAATTD------PEEAF-   75 (167)
T ss_dssp             EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHH-CTTSEEEEESC------HHHHH-
T ss_pred             ceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHh-CCCcceEecCC------hhhcc-
Confidence            45777788554333344444432     2479999999877653333322   221 122222 1222      12222 


Q ss_pred             HHHhcCCCccEEEEccccC
Q 044688          101 DFTTKGLPLNILINNAGIM  119 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~~  119 (147)
                            ..-|++|+.+|..
T Consensus        76 ------~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 ------TDVDFVMAHIRVG   88 (167)
T ss_dssp             ------SSCSEEEECCCTT
T ss_pred             ------CCCCEEEECCCcC
Confidence                  2689999999975

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.31  E-value=0.16  Score=34.14  Aligned_cols=32  Identities=19%  Similarity=0.252  Sum_probs=28.2

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .|+|.||+ -.|..+|..|.+.|.+|.++.+.+
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            57888885 889999999999999999998864

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.71  E-value=0.27  Score=33.32  Aligned_cols=31  Identities=19%  Similarity=0.335  Sum_probs=26.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++|+|+ |..|...|..|+++|.+|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            677776 6789999999999999999998753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.48  E-value=0.52  Score=28.98  Aligned_cols=35  Identities=23%  Similarity=0.244  Sum_probs=26.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~   63 (147)
                      .++.++|.|| |..|...|..+.+.|+ .|++++|..
T Consensus        44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            3556777766 6788999999999997 577887753

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.40  E-value=1.3  Score=28.70  Aligned_cols=63  Identities=16%  Similarity=0.039  Sum_probs=41.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      .+.|++|=+|...|......-+.+..+.+|+.++.+++..+.+...+....-..++.++..|.
T Consensus        55 ~kpk~ILEiGt~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~  117 (214)
T d2cl5a1          55 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGAS  117 (214)
T ss_dssp             HCCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred             hCCCEEEEEccCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccc
Confidence            366899999998766543322222456799999998877666666665543234677777664

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=87.21  E-value=1.3  Score=24.60  Aligned_cols=69  Identities=12%  Similarity=0.112  Sum_probs=44.2

Q ss_pred             CEEEEecCCCchh-HHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCC
Q 044688           30 LTAIVTGASSGIG-AETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLP  108 (147)
Q Consensus        30 ~~~litG~~~giG-~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~  108 (147)
                      .++-+.|- +|+| .++|+.|.++|+.|...++...   ...+.|++.  +.++. ..-|..+              ...
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~---~~t~~L~~~--Gi~i~-~gh~~~~--------------i~~   60 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEET---ERTAYLRKL--GIPIF-VPHSADN--------------WYD   60 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCC---HHHHHHHHT--TCCEE-SSCCTTS--------------CCC
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCC---hhHHHHHHC--CCeEE-eeecccc--------------cCC
Confidence            34566665 4555 4789999999999999998754   333446554  44432 1122211              136


Q ss_pred             ccEEEEccccC
Q 044688          109 LNILINNAGIM  119 (147)
Q Consensus       109 id~lv~~ag~~  119 (147)
                      .|.+|.+.++.
T Consensus        61 ~d~vV~SsAI~   71 (89)
T d1j6ua1          61 PDLVIKTPAVR   71 (89)
T ss_dssp             CSEEEECTTCC
T ss_pred             CCEEEEecCcC
Confidence            89999999875

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.03  E-value=0.64  Score=27.74  Aligned_cols=89  Identities=16%  Similarity=0.091  Sum_probs=54.2

Q ss_pred             CCCCCEEEEecCC---CchhHHHHHHHHHCC-CEEEEEEccCccch--HHHHHHHhhCCCCeeEEEEecCCCHHHHHHHH
Q 044688           26 DATGLTAIVTGAS---SGIGAETTRVLALRG-VHVFMAVRNMAAGT--DVKDAIVKEIPTAKVDVLELDLSSLASVRKFA   99 (147)
Q Consensus        26 ~~~~~~~litG~~---~giG~~~a~~l~~~g-~~v~~~~r~~~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~   99 (147)
                      -++.|.+.|.|+|   +.+|..+.+.|.+.| .+|+.+....+...  .....+.+.  ...+..+.. ....+.+.+++
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dl--p~~vDlvvi-~vp~~~~~~~~   81 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDI--PDEIDLAII-VVPKRFVKDTL   81 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSC--SSCCSEEEE-CSCHHHHHHHH
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhc--CCCCceEEE-ecChHHhHHHH
Confidence            3678999999998   789999999987766 58988877654321  111122211  112222111 13567788888


Q ss_pred             HHHHhcCCCcc-EEEEccccC
Q 044688          100 SDFTTKGLPLN-ILINNAGIM  119 (147)
Q Consensus       100 ~~~~~~~~~id-~lv~~ag~~  119 (147)
                      ++..+.  ++. +++..+|+.
T Consensus        82 ~~~~~~--g~~~~vi~s~Gf~  100 (129)
T d2csua1          82 IQCGEK--GVKGVVIITAGFG  100 (129)
T ss_dssp             HHHHHH--TCCEEEECCCSST
T ss_pred             HHHHHc--CCCEEEEeccccc
Confidence            887765  343 555566654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.01  E-value=0.23  Score=28.62  Aligned_cols=38  Identities=16%  Similarity=0.072  Sum_probs=29.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ..++||+++|.|++ -=|..+|..|+..+.++++..|..
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            35889999999986 456778999998888877776654

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=86.98  E-value=2.7  Score=27.38  Aligned_cols=86  Identities=13%  Similarity=0.051  Sum_probs=50.1

Q ss_pred             CCCCEEEEecCCCchhHHH-HHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAET-TRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~-a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ...|++|=+|...|..... |+.+ ..+.+|+.+..+++..+.+.+.+.+.....++.++..|.  .+.+.++.+. ...
T Consensus        58 ~~~k~iLEiGT~~GyStl~la~al-~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~~  133 (227)
T d1susa1          58 INAKNTMEIGVYTGYSLLATALAI-PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EKN  133 (227)
T ss_dssp             HTCCEEEEECCGGGHHHHHHHHHS-CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GGG
T ss_pred             cCCCcEEEecchhhhhHHHHHhhC-CCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-ccc
Confidence            4778999999986665433 3333 345699999999877666666665543234566665554  2222332221 112


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                      .+.+|.++.-|
T Consensus       134 ~~~fD~iFiDa  144 (227)
T d1susa1         134 HGSYDFIFVDA  144 (227)
T ss_dssp             TTCBSEEEECS
T ss_pred             CCceeEEEecc
Confidence            34567666655

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=86.87  E-value=1.4  Score=29.43  Aligned_cols=61  Identities=13%  Similarity=0.026  Sum_probs=39.3

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .+.++|=.|++.|.   ++..|+++ |++|+.++.++..++.+.+.........++.++.+|+.+
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~  128 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE  128 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccc
Confidence            57889988886552   34445543 789999998877666555555443223456677766644

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=86.87  E-value=1.8  Score=25.14  Aligned_cols=80  Identities=20%  Similarity=0.163  Sum_probs=52.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~  105 (147)
                      +..++||.-....+...+...|.+.|++|..+...    +++.+.+.+    .....+-+|+.  +.+. ..++.++++.
T Consensus         2 ~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~----~~a~~~l~~----~~~dlii~D~~mp~~~G-~el~~~l~~~   72 (123)
T d1krwa_           2 QRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENG----NEVLAALAS----KTPDVLLSDIRMPGMDG-LALLKQIKQR   72 (123)
T ss_dssp             CCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSS----HHHHHHHTT----CCCSEEEECCSSSSSTT-HHHHHHHHHH
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCH----HHHHHHHHh----CCCCEEEehhhcCCchH-HHHHHHHHHh
Confidence            44679999999999999999999999998765432    344444443    24455666654  3322 3456666666


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                      ++.+-+++.++
T Consensus        73 ~~~~piI~~t~   83 (123)
T d1krwa_          73 HPMLPVIIMTA   83 (123)
T ss_dssp             SSSCCEEESCC
T ss_pred             CCCCeEEEEec
Confidence            66777776554

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=86.78  E-value=0.35  Score=31.88  Aligned_cols=33  Identities=24%  Similarity=0.184  Sum_probs=27.4

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      -++|+|+ |.-|...|..|++.|.+|.++.+++.
T Consensus         6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            3677777 56788999999999999999998754

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=86.64  E-value=1.4  Score=28.62  Aligned_cols=61  Identities=16%  Similarity=0.090  Sum_probs=40.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .|+.+|=.|++.|   .++..|++ .|++|+.++.++..++...+.......+.++.++..|+.+
T Consensus        33 pg~~VLDiGCG~G---~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~   94 (245)
T d1nkva_          33 PGTRILDLGSGSG---EMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG   94 (245)
T ss_dssp             TTCEEEEETCTTC---HHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred             CCCEEEEEcCCCC---HHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhh
Confidence            3678888888665   23455655 4789999999877666555544444334467777777654

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.24  E-value=2.5  Score=27.21  Aligned_cols=78  Identities=14%  Similarity=0.109  Sum_probs=50.7

Q ss_pred             CCCCEEEEecCCCchhHH-HHH---HHHHC-----CCEEEEEEccCccchHHHHHHHhhCC------------CCeeEEE
Q 044688           27 ATGLTAIVTGASSGIGAE-TTR---VLALR-----GVHVFMAVRNMAAGTDVKDAIVKEIP------------TAKVDVL   85 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~-~a~---~l~~~-----g~~v~~~~r~~~~~~~~~~~l~~~~~------------~~~~~~~   85 (147)
                      ...-+.+|.||+|-+..- +..   +|...     +.+|+.++|++-..++..+.+.....            -.++.++
T Consensus        18 ~~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          18 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             SCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            345679999999988742 222   22233     45799999976554454444332111            2468888


Q ss_pred             EecCCCHHHHHHHHHHHHh
Q 044688           86 ELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        86 ~~D~~~~~~~~~~~~~~~~  104 (147)
                      .+|+++.++..++-+.+..
T Consensus        98 ~~d~~~~~~~~~L~~~l~~  116 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNA  116 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCChhhHHHHHHHHHH
Confidence            9999999998888666554

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.09  E-value=0.91  Score=29.36  Aligned_cols=38  Identities=29%  Similarity=0.493  Sum_probs=30.5

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHH--------------------HCCC-EEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLA--------------------LRGV-HVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~--------------------~~g~-~v~~~~r~~   63 (147)
                      ..+.+|.|+|.|+ |-.+..+|+.++                    +.|+ +|++++|..
T Consensus        35 ~~~~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg   93 (216)
T d1lqta1          35 PDLSGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRG   93 (216)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECC
Confidence            4578999999988 568888888877                    5676 799999864

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=86.06  E-value=2  Score=24.81  Aligned_cols=79  Identities=19%  Similarity=0.305  Sum_probs=51.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~  106 (147)
                      +|++||.-....+-..+.+.|.+.|++|.....    .+++.+.+++.  ...  .+-+|+.  +.+- ..+++++++..
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~----g~eal~~~~~~--~~d--lillD~~mP~~~G-~el~~~lr~~~   71 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAAN----GLQALDIVTKE--RPD--LVLLDMKIPGMDG-IEILKRMKVID   71 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESS----HHHHHHHHHHH--CCS--EEEEESCCTTCCH-HHHHHHHHHHC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCC----HHHHHHHHHhC--CCC--EEEEeccCCCCCH-HHHHHHHHHhC
Confidence            578999999999999999999899999876443    23344444443  223  4445554  4433 34566666666


Q ss_pred             CCccEEEEcc
Q 044688          107 LPLNILINNA  116 (147)
Q Consensus       107 ~~id~lv~~a  116 (147)
                      ..+.+++..+
T Consensus        72 ~~~pvi~lt~   81 (119)
T d1peya_          72 ENIRVIIMTA   81 (119)
T ss_dssp             TTCEEEEEES
T ss_pred             CCCcEEEEec
Confidence            6677777664

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.91  E-value=0.57  Score=30.26  Aligned_cols=50  Identities=12%  Similarity=0.081  Sum_probs=35.8

Q ss_pred             CCCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhh
Q 044688           27 ATGLTAIVTGASSG-IGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKE   76 (147)
Q Consensus        27 ~~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~   76 (147)
                      ..+.++|=.|++.| +...+++.+...+++|++++.+++-++.+.+.+.+.
T Consensus        38 ~~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~   88 (225)
T d1im8a_          38 TADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAY   88 (225)
T ss_dssp             CTTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhh
Confidence            35678998998744 456666665567899999999887667666655543

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=85.71  E-value=2.4  Score=29.98  Aligned_cols=105  Identities=8%  Similarity=0.040  Sum_probs=62.1

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-----CHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-----SLASVRKFASDF  102 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~  102 (147)
                      ....++||.|+...=..++..|+..|..|++....-....   ..+... .+.++..+.+|-.     +.+.+.+.+.+.
T Consensus       108 ~pe~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~~~---~~~~~~-~g~~~v~v~~~~~~~~~l~~~~~~~~~~~~  183 (431)
T d1m7ya_         108 DPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFD---RDLKWR-TGVEIVPIHCTSSNGFQITETALEEAYQEA  183 (431)
T ss_dssp             CGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH---HHTTTT-TCCEEEEEECCGGGTSCCCHHHHHHHHHHH
T ss_pred             CcceEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCchhHH---HHHHHh-cCceeccccccchhcccccHHHhhhhhhhh
Confidence            3456778777666666667778888888776554432222   122111 1456666666532     567788888887


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhhh
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFAT  136 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~  136 (147)
                      .....++..++.|.--..-....+.+++++.++.
T Consensus       184 ~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~  217 (431)
T d1m7ya_         184 EKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSF  217 (431)
T ss_dssp             HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             hhccCcceEEEecCcccccccccccccccccccc
Confidence            7777777766655321111234677777766653

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=85.66  E-value=3.9  Score=27.95  Aligned_cols=80  Identities=13%  Similarity=0.094  Sum_probs=52.5

Q ss_pred             CCCEEEEecCC-CchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           28 TGLTAIVTGAS-SGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        28 ~~~~~litG~~-~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .|+++|=.++. |+++..+    +..|+ +|+.++.+++.++.+.+.+....-..++.++..|+.      ........+
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhh------hhhHHHHhc
Confidence            47888866664 5555543    45676 799999998877777776665432346777777752      223334444


Q ss_pred             CCCccEEEEccc
Q 044688          106 GLPLNILINNAG  117 (147)
Q Consensus       106 ~~~id~lv~~ag  117 (147)
                      ..++|.||.+.-
T Consensus       215 ~~~fD~Vi~DpP  226 (324)
T d2as0a2         215 GEKFDIVVLDPP  226 (324)
T ss_dssp             TCCEEEEEECCC
T ss_pred             cCCCCchhcCCc
Confidence            568999998753

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.66  E-value=0.78  Score=28.41  Aligned_cols=36  Identities=14%  Similarity=0.217  Sum_probs=32.7

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ++|+++++.|..+.+..+++..+..-|+++.+++..
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            789999999999889999999999999999998764

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.66  E-value=0.81  Score=29.94  Aligned_cols=82  Identities=13%  Similarity=0.100  Sum_probs=54.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH-CC----CEEEEEEccCccchHHHHHHHhh----CCCCeeEEEEecCCCHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLAL-RG----VHVFMAVRNMAAGTDVKDAIVKE----IPTAKVDVLELDLSSLASVRKF   98 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~-~g----~~v~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~~~D~~~~~~~~~~   98 (147)
                      .+.++|..|+++|--.++.-+++. .|    .+|+.+.++++-.+...+.+...    ....++.++..|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            468999999999988888877774 34    48999998866544443333211    0124688888887431      


Q ss_pred             HHHHHhcCCCccEEEEccccC
Q 044688           99 ASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        99 ~~~~~~~~~~id~lv~~ag~~  119 (147)
                          ....++.|.++.++++.
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                11235799999888764

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=85.40  E-value=1.2  Score=29.13  Aligned_cols=79  Identities=11%  Similarity=0.024  Sum_probs=49.8

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .++++|=.|++.|-   ....|++.|. +|+.++.+++.++.+...........++.+..+|+....-         ...
T Consensus        24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            57889988887652   3456666675 7999999988777766655443223467788888643210         012


Q ss_pred             CCccEEEEcccc
Q 044688          107 LPLNILINNAGI  118 (147)
Q Consensus       107 ~~id~lv~~ag~  118 (147)
                      +..|+|+.+-++
T Consensus        92 ~~fD~V~~~~~l  103 (252)
T d1ri5a_          92 KEFDVISSQFSF  103 (252)
T ss_dssp             SCEEEEEEESCG
T ss_pred             ccceEEEEccee
Confidence            357777665443

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=85.39  E-value=3.3  Score=26.82  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=58.5

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      .++++.+-.-...+++.|.+.|.+++=+..+.+...+..+.+++.+|  ++..=..-+.+.++++++++.      +.++
T Consensus        19 pvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~a~~~I~~l~~~~p--~~~vGaGTV~~~~~~~~a~~a------Ga~F   90 (213)
T d1wbha1          19 PVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVP--EAIVGAGTVLNPQQLAEVTEA------GAQF   90 (213)
T ss_dssp             EEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCT--TSEEEEESCCSHHHHHHHHHH------TCSC
T ss_pred             EEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC--CCeeeccccccHHHHHHHHHC------CCcE
Confidence            47788888899999999999999765555555556777777888764  466667899999999988774      6777


Q ss_pred             EEEc
Q 044688          112 LINN  115 (147)
Q Consensus       112 lv~~  115 (147)
                      +|.-
T Consensus        91 ivSP   94 (213)
T d1wbha1          91 AISP   94 (213)
T ss_dssp             EEES
T ss_pred             EECC
Confidence            7654

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=85.31  E-value=0.45  Score=30.38  Aligned_cols=31  Identities=23%  Similarity=0.339  Sum_probs=25.1

Q ss_pred             EEEecCCCchhHHHHHHHHHCCC-EEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGV-HVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~   63 (147)
                      |+|+|| |--|...|..|.+.|. +|+++.++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            667776 6678899999999996 699987753

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=85.26  E-value=0.9  Score=30.78  Aligned_cols=76  Identities=12%  Similarity=0.101  Sum_probs=51.0

Q ss_pred             CCCEEEEecCC-CchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcC
Q 044688           28 TGLTAIVTGAS-SGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKG  106 (147)
Q Consensus        28 ~~~~~litG~~-~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~  106 (147)
                      .+..++=.|++ |-||.+++..+  ....|++++.+++.++-+........ -.++.++..|+-+.-           ..
T Consensus       108 ~~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~-~~~v~~~~~d~~~~~-----------~~  173 (274)
T d2b3ta1         108 QPCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLA-IKNIHILQSDWFSAL-----------AG  173 (274)
T ss_dssp             SCCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHT-CCSEEEECCSTTGGG-----------TT
T ss_pred             cccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhC-cccceeeeccccccc-----------CC
Confidence            34556666665 55666665543  35699999999887777766665552 236889999985531           12


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      .++|++|.|-=
T Consensus       174 ~~fDlIvsNPP  184 (274)
T d2b3ta1         174 QQFAMIVSNPP  184 (274)
T ss_dssp             CCEEEEEECCC
T ss_pred             CceeEEEecch
Confidence            47999999953

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.25  E-value=0.38  Score=32.77  Aligned_cols=32  Identities=19%  Similarity=0.199  Sum_probs=26.5

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      -++|.|| |--|..+|++|++.|.+|.++.++.
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            3677777 6778999999999999999988754

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.01  E-value=0.5  Score=31.88  Aligned_cols=31  Identities=19%  Similarity=0.289  Sum_probs=25.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      |+|+|+ |--|...|..|++.|.+|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            566666 5678999999999999999998753

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=84.87  E-value=0.42  Score=32.62  Aligned_cols=31  Identities=16%  Similarity=0.318  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      |+|.|+ |.-|...|..|+++|.+|+++.+.+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            677776 6789999999999999999998753

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.83  E-value=2.6  Score=26.04  Aligned_cols=80  Identities=10%  Similarity=-0.059  Sum_probs=53.4

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      .++++..+||.-........+...|...|++|..+....+.++        .  ..++.+.-+++-. .... .......
T Consensus         7 ~~l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~--------~--~~Dlvl~D~~mp~-~~~~-~~~~~~~   74 (189)
T d1qo0d_           7 GSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFD--------V--PVDVVFTSIFQNR-HHDE-IAALLAA   74 (189)
T ss_dssp             HTGGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCS--------S--CCSEEEEECCSST-HHHH-HHHHHHH
T ss_pred             HhccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHHhcc--------C--CCCEEEEcCCCCC-cHHH-HHHHHHH
Confidence            3578889999999999999999999999999988876554432        0  2234333333322 2233 3334556


Q ss_pred             cCCCccEEEEcc
Q 044688          105 KGLPLNILINNA  116 (147)
Q Consensus       105 ~~~~id~lv~~a  116 (147)
                      +.+.+-+|+..+
T Consensus        75 ~~p~~pvI~lta   86 (189)
T d1qo0d_          75 GTPRTTLVALVE   86 (189)
T ss_dssp             SCTTCEEEEEEC
T ss_pred             cCCCCCEEEEec
Confidence            667777777665

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.58  E-value=3.6  Score=26.58  Aligned_cols=61  Identities=11%  Similarity=-0.010  Sum_probs=37.8

Q ss_pred             CCCCEEEEecCCCchh-HHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEec
Q 044688           27 ATGLTAIVTGASSGIG-AETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELD   88 (147)
Q Consensus        27 ~~~~~~litG~~~giG-~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D   88 (147)
                      .+.|++|=+|...|.. ..+++.+ ..+.+|+.++.+++..+.+.+.+....-..++.....|
T Consensus        58 ~~~k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd  119 (219)
T d2avda1          58 IQAKKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP  119 (219)
T ss_dssp             TTCCEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC
T ss_pred             cCCCeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEee
Confidence            5779999999986655 3333333 33559999998887666655555443223345454444

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.47  E-value=2.9  Score=28.84  Aligned_cols=95  Identities=12%  Similarity=0.024  Sum_probs=52.7

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-----CHHHHHHHHHHHHh
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-----SLASVRKFASDFTT  104 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~  104 (147)
                      ..+++|.|+...-..+...|+..|..|++-...-..........     +.++..+.++-.     |.+.+.+.+.    
T Consensus        87 ~~i~~t~G~~~~l~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~-----g~~~~~~~~~~~~~~~~d~~~l~~~~~----  157 (388)
T d1gdea_          87 TEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILA-----GGKPVEVPTYEEDEFRLNVDELKKYVT----  157 (388)
T ss_dssp             TSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHH-----TCEEEEEECCGGGTTCCCHHHHHHHCC----
T ss_pred             heeeeccCcchHHHHHHHHhcCCCCEEEECCCCcHHHHHHHHHc-----CCEEEEeecccccCCCCCHHHHHHhCc----
Confidence            45777777665555566677778888877665544433343333     667777776533     3444433322    


Q ss_pred             cCCCccEEEEccccCCCCCCCCHHHHHHhhh
Q 044688          105 KGLPLNILINNAGIMASPFMLSKDNIELQFA  135 (147)
Q Consensus       105 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~  135 (147)
                        .+...++.|.--......++.+++++..+
T Consensus       158 --~~~~~i~~~~P~NPtG~~~s~~~~~~l~~  186 (388)
T d1gdea_         158 --DKTRALIINSPCNPTGAVLTKKDLEEIAD  186 (388)
T ss_dssp             --TTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             --cCCeEEEECCCcCCCCCcCCHHHHHHHHH
Confidence              24555555432211123467777776655

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=84.47  E-value=1.5  Score=29.27  Aligned_cols=60  Identities=8%  Similarity=-0.001  Sum_probs=42.3

Q ss_pred             CCCEEEEecCC-CchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGAS-SGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~-~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .|.++|-.|++ |.++..+|+    .| .+|+.++.++...+.+...+....-..++.++..|..+
T Consensus       107 ~g~~VlD~~aG~G~~~l~~a~----~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~  168 (260)
T d2frna1         107 PDELVVDMFAGIGHLSLPIAV----YGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRD  168 (260)
T ss_dssp             TTCEEEETTCTTTTTHHHHHH----HTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTT
T ss_pred             CccEEEECcceEcHHHHHHHH----hCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHH
Confidence            57889888875 566655553    34 59999999988777776666554223468888888754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=84.41  E-value=2.1  Score=27.56  Aligned_cols=60  Identities=10%  Similarity=-0.060  Sum_probs=39.7

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSS   91 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~   91 (147)
                      .|.++|=.|++.|.   ++..|++.+.+|+.++.++.-++.+.+.+.... -.++.++..|+.+
T Consensus        16 ~~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~-~~~~~~~~~d~~~   75 (234)
T d1xxla_          16 AEHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKG-VENVRFQQGTAES   75 (234)
T ss_dssp             TTCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHT-CCSEEEEECBTTB
T ss_pred             CCCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhcccc-ccccccccccccc
Confidence            35678888887663   345666778899999998776666655554432 2346666666543

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=84.39  E-value=0.47  Score=29.58  Aligned_cols=84  Identities=11%  Similarity=0.087  Sum_probs=52.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEEE-EEccCcc-chHHHH--------------HHHhhCCCCeeEEEEecCCCHH
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVFM-AVRNMAA-GTDVKD--------------AIVKEIPTAKVDVLELDLSSLA   93 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~~-~~r~~~~-~~~~~~--------------~l~~~~~~~~~~~~~~D~~~~~   93 (147)
                      ++.|.|++|-+|+++++...+. +..++. +++.... ......              .+........   +..|++.++
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D---ViIDFs~p~   82 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD---VFIDFTRPE   82 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS---EEEECSCHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc---eEEEeccHH
Confidence            5889999999999999999886 556533 3432211 100000              0000000122   457999999


Q ss_pred             HHHHHHHHHHhcCCCccEEEEccccC
Q 044688           94 SVRKFASDFTTKGLPLNILINNAGIM  119 (147)
Q Consensus        94 ~~~~~~~~~~~~~~~id~lv~~ag~~  119 (147)
                      .....++...+.  ++.+|+=..|+.
T Consensus        83 ~~~~~~~~a~~~--~~~~ViGTTG~~  106 (162)
T d1diha1          83 GTLNHLAFCRQH--GKGMVIGTTGFD  106 (162)
T ss_dssp             HHHHHHHHHHHT--TCEEEECCCCCC
T ss_pred             HHHHHHHHHHhc--cceeEEecCCCc
Confidence            998888876665  688888777753

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=84.26  E-value=2.9  Score=26.13  Aligned_cols=63  Identities=13%  Similarity=0.222  Sum_probs=47.8

Q ss_pred             HCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccEEEEcccc
Q 044688           51 LRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNILINNAGI  118 (147)
Q Consensus        51 ~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~  118 (147)
                      ..|.++++.+.+....+.+...|.+.  +-++.++..++.+.+ -.++++.+..  |.+++||+...+
T Consensus        29 ~~g~r~lvfc~t~~~~~~l~~~L~~~--Gi~a~~~Hg~~~~~e-R~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          29 ARGERTLVTVLTVRMAEELTSFLVEH--GIRARYLHHELDAFK-RQALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HTTCEEEEECSSHHHHHHHHHHHHHT--TCCEEEECTTCCHHH-HHHHHHHHHT--TSCSEEEESCCC
T ss_pred             hcCCcEEEEEcchhHHHHHHHHHHhc--CCceEEEecccchHH-HHHHHHHHHC--CCeEEEEeeeee
Confidence            46889988888888888888888876  778889999987654 4445555543  689999987644

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=84.26  E-value=1.1  Score=29.19  Aligned_cols=38  Identities=24%  Similarity=0.336  Sum_probs=31.1

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHH--------------------CCC-EEEEEEccC
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLAL--------------------RGV-HVFMAVRNM   63 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~--------------------~g~-~v~~~~r~~   63 (147)
                      ..+.+|.++|.|+ |-.+..+|+.+++                    .|+ +|.+++|..
T Consensus        35 ~~~~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg   93 (225)
T d1cjca1          35 PDLSCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG   93 (225)
T ss_dssp             CCTTSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred             ccccCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcC
Confidence            4577999988887 6789999999887                    365 899999864

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.26  E-value=1.9  Score=26.80  Aligned_cols=39  Identities=18%  Similarity=0.291  Sum_probs=26.3

Q ss_pred             EEEEecCCCchhHHHHHHHHHC-CCEEE-EEEccCccchHHH
Q 044688           31 TAIVTGASSGIGAETTRVLALR-GVHVF-MAVRNMAAGTDVK   70 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~-g~~v~-~~~r~~~~~~~~~   70 (147)
                      ++.|.|+ |.+|...++.+... +++|+ ++++++++...+.
T Consensus         3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~   43 (184)
T d1ydwa1           3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFA   43 (184)
T ss_dssp             EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHH
T ss_pred             EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccch
Confidence            3667775 67999999888775 56765 4566655444443

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=84.17  E-value=3  Score=28.23  Aligned_cols=32  Identities=19%  Similarity=0.037  Sum_probs=22.8

Q ss_pred             CEEEEecCCCch---hHHHHHHHHHCCCEEEEEEc
Q 044688           30 LTAIVTGASSGI---GAETTRVLALRGVHVFMAVR   61 (147)
Q Consensus        30 ~~~litG~~~gi---G~~~a~~l~~~g~~v~~~~r   61 (147)
                      |+++.++||+|-   -.++|++|.++|++|+++..
T Consensus         2 ril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~   36 (391)
T d1pn3a_           2 RVLITGCGSRGDTEPLVALAARLRELGADARMCLP   36 (391)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             EEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            345556666433   25699999999999988764

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=84.15  E-value=0.9  Score=27.29  Aligned_cols=86  Identities=16%  Similarity=0.186  Sum_probs=50.9

Q ss_pred             CCCEEEEecCC---CchhHHHHHHHHHCCCEEEEEEccCc--cch--HHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHH
Q 044688           28 TGLTAIVTGAS---SGIGAETTRVLALRGVHVFMAVRNMA--AGT--DVKDAIVKEIPTAKVDVLELDLSSLASVRKFAS  100 (147)
Q Consensus        28 ~~~~~litG~~---~giG~~~a~~l~~~g~~v~~~~r~~~--~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~  100 (147)
                      +.|.+.|.|+|   +..|..+.+.|.+.|++++.+..++.  ...  .....+...  ...+..+.+ +..++.+..+++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i--~~~iD~v~v-~~p~~~v~~~v~   88 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDL--KEPVDILDV-FRPPSALMDHLP   88 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGC--CSCCSEEEE-CSCHHHHTTTHH
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhc--cCCCceEEE-eccHHHHHHHHH
Confidence            56899999998   57999999999999999988876542  111  011111111  111222111 134666777777


Q ss_pred             HHHhcCCCccEEEEcccc
Q 044688          101 DFTTKGLPLNILINNAGI  118 (147)
Q Consensus       101 ~~~~~~~~id~lv~~ag~  118 (147)
                      +..+.  ++..++-..|.
T Consensus        89 ~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          89 EVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHH--CCSCEEECTTC
T ss_pred             HHHhh--CCCeEEEecCc
Confidence            76654  34455555554

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.15  E-value=0.59  Score=29.78  Aligned_cols=30  Identities=17%  Similarity=0.175  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ++|.|+ |..|...|.++++.|.+|.++.++
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence            567777 789999999999999999999875

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=83.95  E-value=1.2  Score=27.20  Aligned_cols=33  Identities=6%  Similarity=0.010  Sum_probs=25.3

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC----CEEEEEEcc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG----VHVFMAVRN   62 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g----~~v~~~~r~   62 (147)
                      |++-|.||||-.|..+.+.|+++.    .++++...+
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss   38 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTS   38 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecc
Confidence            467899999999999999888753    356665544

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=83.93  E-value=0.58  Score=31.07  Aligned_cols=34  Identities=21%  Similarity=0.250  Sum_probs=27.0

Q ss_pred             CEEEEecCCCchhHH-----HHHHHHHCCCEEEEEEccCc
Q 044688           30 LTAIVTGASSGIGAE-----TTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        30 ~~~litG~~~giG~~-----~a~~l~~~g~~v~~~~r~~~   64 (147)
                      |++.|+| =||.|+.     +|..|++.|.+|.+++.++.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            5677887 7788864     56688999999999998753

>d2b4aa1 c.23.1.1 (A:2-119) Hypothetical protein BH3024 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Hypothetical protein BH3024
species: Bacillus halodurans [TaxId: 86665]

Probab=83.54  E-value=0.97  Score=26.28  Aligned_cols=81  Identities=11%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC--CHHHHHHHHHHHHhcC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS--SLASVRKFASDFTTKG  106 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~  106 (147)
                      ..++||.-....+...+...|.+.|++|..+....    +....+.+.   .....+-+|+.  +.+ -.++++++++..
T Consensus         2 p~rILvVdDd~~~~~~l~~~L~~~g~~v~~~~~~~----~al~~l~~~---~~~dliilD~~lp~~~-G~el~~~ir~~~   73 (118)
T d2b4aa1           2 PFRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGS----AFFQHRSQL---STCDLLIVSDQLVDLS-IFSLLDIVKEQT   73 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHH----HHHHTGGGG---GSCSEEEEETTCTTSC-HHHHHHHHTTSS
T ss_pred             CCEEEEEECCHHHHHHHHHHHHhcCCCeEEECCHH----HHHHHHHhc---CCCCEEEEeCCCCCCC-HHHHHHHHHhcC
Confidence            35689999999999999999999999988765432    222223222   22334455554  443 345678887776


Q ss_pred             CCccEEEEccc
Q 044688          107 LPLNILINNAG  117 (147)
Q Consensus       107 ~~id~lv~~ag  117 (147)
                      ..+-+++..+.
T Consensus        74 ~~~pii~lt~~   84 (118)
T d2b4aa1          74 KQPSVLILTTG   84 (118)
T ss_dssp             SCCEEEEEESC
T ss_pred             CCCcEEEEECC
Confidence            66777776653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.38  E-value=2.6  Score=26.48  Aligned_cols=76  Identities=16%  Similarity=0.157  Sum_probs=47.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCccE
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPLNI  111 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~  111 (147)
                      ++|=++-|+=| . .+.+++.+.+|++++++++.+.....    .. ..++.++..+.++.+..   +...  ..+.+|+
T Consensus        21 ~~vD~T~G~GG-h-s~~iL~~~~~viaiD~D~~ai~~a~~----~~-~~~~~~~~~~f~~~~~~---l~~~--~~~~vdg   88 (182)
T d1wg8a2          21 VYVDATLGGAG-H-ARGILERGGRVIGLDQDPEAVARAKG----LH-LPGLTVVQGNFRHLKRH---LAAL--GVERVDG   88 (182)
T ss_dssp             EEEETTCTTSH-H-HHHHHHTTCEEEEEESCHHHHHHHHH----TC-CTTEEEEESCGGGHHHH---HHHT--TCSCEEE
T ss_pred             EEEEeCCCCcH-H-HHHHhcccCcEEEEhhhhhHHHHHhh----cc-ccceeEeehHHHHHHHH---HHHc--CCCccCE
Confidence            34444333333 3 45556667799999999766544332    12 45788888888765443   3322  2457999


Q ss_pred             EEEccccC
Q 044688          112 LINNAGIM  119 (147)
Q Consensus       112 lv~~ag~~  119 (147)
                      ++..-|+.
T Consensus        89 Il~DLGvS   96 (182)
T d1wg8a2          89 ILADLGVS   96 (182)
T ss_dssp             EEEECSCC
T ss_pred             EEEEccCC
Confidence            99988875

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.30  E-value=1.1  Score=29.67  Aligned_cols=34  Identities=18%  Similarity=0.297  Sum_probs=28.7

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEE
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR-GVHVFMAV   60 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~   60 (147)
                      .++|+++.|-|- |.+|..+++.|.+. |++|+.+.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            489999999988 66999999999865 88887764

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=83.13  E-value=0.97  Score=29.43  Aligned_cols=33  Identities=18%  Similarity=0.216  Sum_probs=26.6

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCC-EEEEEEccCc
Q 044688           31 TAIVTGASSGIGAETTRVLALRGV-HVFMAVRNMA   64 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~-~v~~~~r~~~   64 (147)
                      .|+|+|| |--|..+|..|.+.|. +|.+..+.+.
T Consensus         3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            5788887 5668999999999995 8888888643

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=83.12  E-value=0.36  Score=30.31  Aligned_cols=34  Identities=9%  Similarity=0.051  Sum_probs=28.0

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++.++|.|+ |-.|..-|..+++.|.+|+++.+..
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            467888888 4588999999999999999987643

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=83.11  E-value=0.65  Score=29.53  Aligned_cols=31  Identities=13%  Similarity=0.057  Sum_probs=26.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++|.|+ |..|...|..+++.|.+|+++.+.+
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            677777 6789999999999999999998754

>d1kl7a_ c.79.1.1 (A:) Threonine synthase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.06  E-value=6.4  Score=28.92  Aligned_cols=74  Identities=16%  Similarity=0.210  Sum_probs=49.8

Q ss_pred             CCEEEEecC-CCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHh
Q 044688           29 GLTAIVTGA-SSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTT  104 (147)
Q Consensus        29 ~~~~litG~-~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  104 (147)
                      ++.+.|.|| ||.-|.|.+..+.. .+.+|++.+....-.+-...++... .+.+++.+.+| .+-++.+++++++..
T Consensus       150 ~~~~~il~aTSGDTG~Aa~~af~~~~~i~v~vlyP~~~vS~iQ~~Qmtt~-~~~Nv~~i~v~-G~fDDcq~~vk~~f~  225 (511)
T d1kl7a_         150 KKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTV-PDENVQTLSVT-GTFDNCQDIVKAIFG  225 (511)
T ss_dssp             CCCEEEEEECSSSHHHHHHHHHTTCTTEEEEEEEETTSSCHHHHHHHHHC-CCTTEEEEEES-SCHHHHHHHHHHHHH
T ss_pred             CceEEEEEecCCCccHHHHHHhcCCCCceeEEeccCCCCchHHHHHHhhc-CCceEEEEEec-cChHHHHHHHHHHHh
Confidence            455555555 57899999999884 4668988888644333333444443 24578888887 467788888888864

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=82.87  E-value=2.1  Score=25.09  Aligned_cols=39  Identities=15%  Similarity=0.081  Sum_probs=30.9

Q ss_pred             CCCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCc
Q 044688           25 IDATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMA   64 (147)
Q Consensus        25 ~~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~   64 (147)
                      ...++|.++|.|+ |--+..-|..|.+.+.+|+++.|..+
T Consensus        23 ~~~~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          23 FFYRNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             GGGTTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             HHhCCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            3468999999999 55666777888887889999998653

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.83  E-value=3.5  Score=27.87  Aligned_cols=37  Identities=11%  Similarity=0.109  Sum_probs=26.4

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHC--CCEEEEEEccCcc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALR--GVHVFMAVRNMAA   65 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~--g~~v~~~~r~~~~   65 (147)
                      ....|.+||.|+++|   .+++++++.  ..+|.++..+++-
T Consensus        76 ~~~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~V  114 (285)
T d2o07a1          76 HPNPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDV  114 (285)
T ss_dssp             SSSCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHH
T ss_pred             CcCcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHH
Confidence            457789999999876   456666665  3488888877543

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.82  E-value=1  Score=29.56  Aligned_cols=75  Identities=13%  Similarity=0.182  Sum_probs=46.6

Q ss_pred             CCCEEEEecCCCc-hhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-----------------CCeeEEEEecC
Q 044688           28 TGLTAIVTGASSG-IGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-----------------TAKVDVLELDL   89 (147)
Q Consensus        28 ~~~~~litG~~~g-iG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-----------------~~~~~~~~~D~   89 (147)
                      .|.++|=.|++.| .-..+++..-. +.+|+.++.++..++.+.........                 ...+.++.+|+
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~-~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~  151 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGW-EGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDV  151 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCC-CCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEc
Confidence            5789999998755 44555554433 44999999998776666554432100                 12455566777


Q ss_pred             CCHHHHHHHHHHHH
Q 044688           90 SSLASVRKFASDFT  103 (147)
Q Consensus        90 ~~~~~~~~~~~~~~  103 (147)
                      ..+++...++.++.
T Consensus       152 ~~~~~~~~~l~~~~  165 (227)
T d1g8aa_         152 AQPTQAKILIDNAE  165 (227)
T ss_dssp             CSTTHHHHHHHHHH
T ss_pred             cccchHHHHHHHHH
Confidence            76666666666554

>d1vb3a1 c.79.1.1 (A:1-428) Threonine synthase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine synthase
species: Escherichia coli [TaxId: 562]

Probab=82.77  E-value=4.6  Score=29.01  Aligned_cols=72  Identities=11%  Similarity=0.120  Sum_probs=46.9

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCC-CEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHH
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRG-VHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFT  103 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g-~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~  103 (147)
                      ++..+++..||.-|.+.+..+...+ .++++.+....-.+.....+...  +.++..+.+| .+-++++++++++.
T Consensus       125 ~~~~Il~ATSGDTG~Aa~~a~~~~~~i~~~vl~P~g~vS~~Q~~Qmtt~--g~nv~vi~V~-G~fDDcq~lvk~~f  197 (428)
T d1vb3a1         125 KPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRGKISPLQEKLFCTL--GGNIETVAID-GDFDACQALVKQAF  197 (428)
T ss_dssp             CCEEEEEECSSSHHHHHHHHTTTCTTEEEEEEEETTCSCHHHHHHHHSC--CTTEEEEEEE-SCHHHHHHHHHHGG
T ss_pred             ccceeeecCCCCcchhHHHHHhCccccceEEEecCCCCcHHHHHHHhhc--cCCceEEecC-CChhHHHHHHHHHh
Confidence            4455666777899999999998765 57888876543322223344433  5677776666 35667777777764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=82.68  E-value=0.11  Score=31.84  Aligned_cols=77  Identities=10%  Similarity=0.140  Sum_probs=41.6

Q ss_pred             CCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCC-------CCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           37 ASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIP-------TAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        37 ~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      |+|-+|+++++.|.+.+..+.+.+|+.++.+++.+.......       ..++.++.  +.| +.+..+.+++.   .+=
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~~~~DiVil~--v~d-~~i~~v~~~l~---~~~   79 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGKAATLEKHPELNGVVFVI--VPD-RYIKTVANHLN---LGD   79 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCCCCSSCCCCC---CEEEC--SCT-TTHHHHHTTTC---CSS
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcccccccchhhhhccCcEEEEe--ccc-hhhhHHHhhhc---ccc
Confidence            457799999998865443446788988887777766532211       12233322  222 34555555442   123


Q ss_pred             cEEEEccccC
Q 044688          110 NILINNAGIM  119 (147)
Q Consensus       110 d~lv~~ag~~  119 (147)
                      .++||+++..
T Consensus        80 ~ivi~~s~~~   89 (153)
T d2i76a2          80 AVLVHCSGFL   89 (153)
T ss_dssp             CCEEECCSSS
T ss_pred             eeeeecccch
Confidence            5778887753

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.65  E-value=2.5  Score=28.82  Aligned_cols=39  Identities=10%  Similarity=0.107  Sum_probs=28.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccCccch
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNMAAGT   67 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~~~~~   67 (147)
                      ....|.+||.|++.|   .+++++++..  .+|.++..+++-.+
T Consensus        87 ~~~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~  127 (295)
T d1inla_          87 HPNPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIE  127 (295)
T ss_dssp             SSSCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHH
T ss_pred             CCCCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHH
Confidence            356799999999876   4566777653  57999988865433

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.33  E-value=0.7  Score=31.52  Aligned_cols=34  Identities=21%  Similarity=0.089  Sum_probs=27.7

Q ss_pred             CCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           29 GLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        29 ~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      .--|+|+|| |--|.++|..|.+.|.+|++..+++
T Consensus         7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            345888887 5678899999999999999988764

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=82.32  E-value=0.55  Score=32.25  Aligned_cols=30  Identities=27%  Similarity=0.320  Sum_probs=24.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      ++|+|+ |--|..+|.+|++.|.+|+++.+-
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            667776 455999999999999999998753

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.28  E-value=0.56  Score=31.99  Aligned_cols=30  Identities=20%  Similarity=0.345  Sum_probs=25.6

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEcc
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRN   62 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~   62 (147)
                      |+|+|+ |..|...|..++++|.+|+++.+.
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~   51 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA   51 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence            667765 778999999999999999999764

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=82.00  E-value=5.5  Score=26.76  Aligned_cols=56  Identities=11%  Similarity=-0.034  Sum_probs=32.1

Q ss_pred             EEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecC
Q 044688           31 TAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDL   89 (147)
Q Consensus        31 ~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~   89 (147)
                      ..+++..+|..|.++|..-...|.+++++..... .....+.++..  +.++..+..+.
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~-~~~k~~~l~~~--Ga~vi~~~~~~  125 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDA-PEAKVAATKGY--GGQVIMYDRYK  125 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTC-CHHHHHHHHHT--TCEEEEECTTT
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeecccccc-cHHHHHHHHHc--CCcEEeccCCc
Confidence            3478888888888888877777776544433221 12223334433  55555544333

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.92  E-value=1.1  Score=26.74  Aligned_cols=35  Identities=17%  Similarity=0.180  Sum_probs=27.5

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHH----CCCEEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLAL----RGVHVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~----~g~~v~~~~r~~   63 (147)
                      ..++++|.|+ |.+|..+|..|++    .|.+|.++.++.
T Consensus        36 ~~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          36 EVKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             HCSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            3678888877 7888888888863    588999988764

>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: Hypothetical protein HI0047
species: Haemophilus influenzae [TaxId: 727]

Probab=81.88  E-value=4.8  Score=25.99  Aligned_cols=78  Identities=12%  Similarity=0.057  Sum_probs=58.4

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhcCCCc
Q 044688           30 LTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTKGLPL  109 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i  109 (147)
                      -..++.+.+..-...+++.|.+.|.+++=+..+.+...+..+.+++.+|  ++.+=..-+.+.++++++++.      +.
T Consensus        16 iipvlr~~~~~~~~~~~~al~~~Gi~~iEitl~~~~a~~~I~~l~~~~p--~~~vGaGTV~~~~~~~~a~~a------Ga   87 (212)
T d1vhca_          16 IVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRP--DFLIAAGTVLTAEQVVLAKSS------GA   87 (212)
T ss_dssp             EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCT--TCEEEEESCCSHHHHHHHHHH------TC
T ss_pred             EEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHhcCC--CceEeeeecccHHHHHHHHhh------CC
Confidence            3556777788888999999999999765554444555666777877764  466777889999999988774      67


Q ss_pred             cEEEEc
Q 044688          110 NILINN  115 (147)
Q Consensus       110 d~lv~~  115 (147)
                      +++|.-
T Consensus        88 ~FivSP   93 (212)
T d1vhca_          88 DFVVTP   93 (212)
T ss_dssp             SEEECS
T ss_pred             cEEECC
Confidence            777654

>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}

class: Alpha and beta proteins (a/b)
fold: PEP carboxykinase-like
superfamily: PEP carboxykinase-like
family: HPr kinase HprK C-terminal domain
domain: HPr kinase HprK C-terminal domain
species: Staphylococcus xylosus [TaxId: 1288]

Probab=81.83  E-value=0.91  Score=28.47  Aligned_cols=31  Identities=39%  Similarity=0.604  Sum_probs=24.6

Q ss_pred             CCCCCEEEEecCCCchhHH-HHHHHHHCCCEEE
Q 044688           26 DATGLTAIVTGASSGIGAE-TTRVLALRGVHVF   57 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~-~a~~l~~~g~~v~   57 (147)
                      ...|+-++|+|.+ |.|+. ++.+|+++|++++
T Consensus        12 ~~~g~gvli~G~s-g~GKS~la~~l~~~g~~li   43 (169)
T d1ko7a2          12 DVYGVGVLITGDS-GIGKSETALELIKRGHRLV   43 (169)
T ss_dssp             EETTEEEEEEEST-TSSHHHHHHHHHHTTCEEE
T ss_pred             EECCEEEEEEeCC-CCCHHHHHHHHHHcCCeEE
Confidence            3578889999985 57875 8999999998644

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=81.80  E-value=3.3  Score=29.22  Aligned_cols=104  Identities=13%  Similarity=0.089  Sum_probs=58.4

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-----CHHHHHHHHHHH
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-----SLASVRKFASDF  102 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~  102 (147)
                      ....++||.|+...=..++..++..|..|++....-....   ..+... .+.++..+.+|..     |.+.+...++..
T Consensus       107 ~~e~Ivit~G~~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~---~~~~~~-~g~~~v~v~~~~~~~~~~d~~~~~~~~~~~  182 (428)
T d1iaya_         107 DPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFN---RDLRWR-TGVQLIPIHCESSNNFKITSKAVKEAYENA  182 (428)
T ss_dssp             CTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHH---HHTTTT-TCCEEEEECCCTTTTTCCCHHHHHHHHHHH
T ss_pred             ChhhEEEcCCHHHHHHHHHHHhCCCCCEEEEccCCchHHH---HHHHHh-cCCeEEEeecccccccccccccccchhhhh
Confidence            3446777766655555566777888877766544322222   222211 1556777776543     466777777777


Q ss_pred             HhcCCCccEEEEccccCCCCCCCCHHHHHHhhh
Q 044688          103 TTKGLPLNILINNAGIMASPFMLSKDNIELQFA  135 (147)
Q Consensus       103 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~  135 (147)
                      .....++..++.+.--.......+.+++++.++
T Consensus       183 ~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~  215 (428)
T d1iaya_         183 QKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLS  215 (428)
T ss_dssp             HHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred             hccCCCceEEEEccCCCcccccccccccchhhe
Confidence            766667776664422111123456666666554

>d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: YjeF N-terminal domain-like
superfamily: YjeF N-terminal domain-like
family: YjeF N-terminal domain-like
domain: Hypothetical protein TM0922, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.75  E-value=1.4  Score=28.49  Aligned_cols=38  Identities=16%  Similarity=0.081  Sum_probs=28.2

Q ss_pred             CEEEEecCC--CchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           30 LTAIVTGAS--SGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        30 ~~~litG~~--~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      +.+++.|..  ||=|..+|+.|.+.|++|.++....+...
T Consensus        42 ~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~~~~~   81 (211)
T d2ax3a2          42 RFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTP   81 (211)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCH
T ss_pred             cEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCccCCc
Confidence            455566664  79999999999999999877665544333

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.69  E-value=4.1  Score=25.37  Aligned_cols=76  Identities=22%  Similarity=0.084  Sum_probs=49.6

Q ss_pred             CCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhC-CCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           27 ATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEI-PTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        27 ~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      ..++++|=.|++.|   .++..+++.+.+|++++.++...+.+.+.+.... ...++.++..|+.+.  +    .     
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~--~----~-----  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN--V----K-----  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT--C----T-----
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh--h----c-----
Confidence            46788998888765   3345566778899999998776666655554321 234678888887532  1    1     


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                      ...+|.++.|.
T Consensus       117 ~~~fD~Ii~~~  127 (194)
T d1dusa_         117 DRKYNKIITNP  127 (194)
T ss_dssp             TSCEEEEEECC
T ss_pred             cCCceEEEEcc
Confidence            13688888764

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=81.69  E-value=3.3  Score=30.11  Aligned_cols=81  Identities=11%  Similarity=0.032  Sum_probs=52.2

Q ss_pred             CCCCCEEEEecCCCchhHHHHHHHHHCCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCCCHHHHHHHHHHHHhc
Q 044688           26 DATGLTAIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLSSLASVRKFASDFTTK  105 (147)
Q Consensus        26 ~~~~~~~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  105 (147)
                      .+.||++.|.|+. .....+++.|.+.|..++.++-.....+ ..+...+..+...+   ..|=.|...+.+.+.+.   
T Consensus       342 ~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~-d~~~~~~~~~~~~~---i~~d~~~~el~~~i~~~---  413 (477)
T d1m1na_         342 RLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHND-DYDRTMKEMGDSTL---LYDDVTGYEFEEFVKRI---  413 (477)
T ss_dssp             HHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHH-HHHTTTTTSCTTCE---EEESCBHHHHHHHHHHH---
T ss_pred             hhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChH-HHHHHHHhcCCCcE---EecCCCHHHHHHHHHhc---
Confidence            3689999998764 5778889988888999888765444322 22223333222222   23334566777777776   


Q ss_pred             CCCccEEEEcc
Q 044688          106 GLPLNILINNA  116 (147)
Q Consensus       106 ~~~id~lv~~a  116 (147)
                        ++|+++-+.
T Consensus       414 --~pDL~ig~~  422 (477)
T d1m1na_         414 --KPDLIGSGI  422 (477)
T ss_dssp             --CCSEEEECH
T ss_pred             --CCCEEEECc
Confidence              799998663

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=81.23  E-value=3.8  Score=24.42  Aligned_cols=83  Identities=10%  Similarity=0.057  Sum_probs=54.7

Q ss_pred             CCCEEEEe---cCCCchhHHHHHHHHH-CCCEEEEEEccCccchHHHHHHHhhCCCCeeEEEEecCC-CHHHHHHHHHHH
Q 044688           28 TGLTAIVT---GASSGIGAETTRVLAL-RGVHVFMAVRNMAAGTDVKDAIVKEIPTAKVDVLELDLS-SLASVRKFASDF  102 (147)
Q Consensus        28 ~~~~~lit---G~~~giG~~~a~~l~~-~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~  102 (147)
                      +.++++++   |..-.+|..++..+++ .|++|+-.+.+.. .+++.+...+.  +.++..+..-.+ ....+.++++.+
T Consensus         2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~--~~d~v~lS~~~~~~~~~~~~~~~~l   78 (137)
T d1ccwa_           2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIET--KADAILVSSLYGQGEIDCKGLRQKC   78 (137)
T ss_dssp             CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHH--TCSEEEEEECSSTHHHHHTTHHHHH
T ss_pred             CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhc--CCCEEEEeeccccchHHHHHHHHHH
Confidence            45666653   3346899998888875 6999988876532 45666666665  567888877554 466677788887


Q ss_pred             HhcCC-CccEEE
Q 044688          103 TTKGL-PLNILI  113 (147)
Q Consensus       103 ~~~~~-~id~lv  113 (147)
                      +++.. .+-+++
T Consensus        79 ~~~~~~~i~iiv   90 (137)
T d1ccwa_          79 DEAGLEGILLYV   90 (137)
T ss_dssp             HHTTCTTCEEEE
T ss_pred             HHhccCCCEEEE
Confidence            76632 344443

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.16  E-value=0.6  Score=29.60  Aligned_cols=34  Identities=18%  Similarity=0.044  Sum_probs=26.4

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccCccch
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNMAAGT   67 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~~~~~   67 (147)
                      +.|.| .|-+|..+|..|+ .|++|+..+.+++..+
T Consensus         3 I~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~   36 (196)
T d1dlja2           3 IAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVD   36 (196)
T ss_dssp             EEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHH
T ss_pred             EEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHH
Confidence            45665 6899999997665 6999999998865443

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.73  E-value=1.1  Score=28.58  Aligned_cols=31  Identities=13%  Similarity=0.112  Sum_probs=26.2

Q ss_pred             EEEecCCCchhHHHHHHHHHCCCEEEEEEccC
Q 044688           32 AIVTGASSGIGAETTRVLALRGVHVFMAVRNM   63 (147)
Q Consensus        32 ~litG~~~giG~~~a~~l~~~g~~v~~~~r~~   63 (147)
                      ++|.|+ |..|...|..+++.|.+|+++....
T Consensus         8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            567777 6679999999999999999998654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=80.66  E-value=0.93  Score=30.16  Aligned_cols=35  Identities=17%  Similarity=0.280  Sum_probs=28.9

Q ss_pred             CCCEEEEecCCCchhHHHHHHHHHC-CCEEEEEEccC
Q 044688           28 TGLTAIVTGASSGIGAETTRVLALR-GVHVFMAVRNM   63 (147)
Q Consensus        28 ~~~~~litG~~~giG~~~a~~l~~~-g~~v~~~~r~~   63 (147)
                      ...-++|+|+ |--|...|.+|+++ |.+|.++.+.+
T Consensus        32 ~e~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          32 AETDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             TEEEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             cCCCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            4456888888 77889999999874 99999999864

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.55  E-value=1.4  Score=30.12  Aligned_cols=33  Identities=21%  Similarity=0.150  Sum_probs=25.5

Q ss_pred             CEEEEecCCCchhHHHHHHHHHCC--CEEEEEEccC
Q 044688           30 LTAIVTGASSGIGAETTRVLALRG--VHVFMAVRNM   63 (147)
Q Consensus        30 ~~~litG~~~giG~~~a~~l~~~g--~~v~~~~r~~   63 (147)
                      |+|+|+|| |--|..+|..|++.|  .+|++..++.
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            67888887 456678888888876  5899988874