Query 044689
Match_columns 253
No_of_seqs 161 out of 1083
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 09:49:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044689.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044689hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2hcz_X Beta-expansin 1A; domai 100.0 1.5E-68 5E-73 472.3 24.4 227 20-251 14-244 (245)
2 1n10_A PHL P I, pollen allerge 100.0 1.1E-67 3.7E-72 465.6 25.3 223 21-248 15-241 (241)
3 3d30_A YOAJ, expansin like pro 100.0 3.4E-55 1.2E-59 378.9 23.7 198 21-252 2-207 (208)
4 3ft1_A PHL P 3 allergen; beta- 100.0 6.1E-30 2.1E-34 196.4 12.6 96 154-251 3-99 (100)
5 1wc2_A Endoglucanase; hydrolas 100.0 1E-29 3.5E-34 211.7 8.7 116 23-151 12-160 (181)
6 2jnz_A PHL P 3 allergen; timot 100.0 5E-28 1.7E-32 187.8 13.1 97 151-249 11-108 (108)
7 1bmw_A PHL P II, pollen allerg 99.9 3.4E-28 1.2E-32 185.6 -0.5 93 154-249 3-96 (96)
8 1bw3_A Barwin, basic barley SE 99.7 4.6E-17 1.6E-21 128.9 5.8 92 42-149 27-124 (125)
9 4avr_A PA4485; unknown functio 99.2 7.6E-11 2.6E-15 89.0 11.4 92 26-146 2-94 (95)
10 2kqa_A Cerato-platanin; elicit 98.1 7.7E-06 2.6E-10 64.6 8.1 85 43-147 26-120 (129)
11 3m3g_A EPL1 protein; fungal, p 98.1 8.3E-06 2.8E-10 63.8 7.7 75 55-148 40-115 (120)
12 3sul_A Cerato-platanin-like pr 98.1 1.3E-05 4.3E-10 63.0 8.0 71 61-148 46-117 (122)
13 3suk_A Cerato-platanin-like pr 98.0 1.5E-05 5.2E-10 62.8 7.0 75 59-148 45-120 (125)
14 3suj_A Cerato-platanin 1; doub 97.9 2.5E-05 8.7E-10 61.6 7.4 76 59-148 44-120 (127)
15 3sum_A Cerato-platanin-like pr 97.7 8.8E-05 3E-09 58.9 7.4 78 55-149 44-123 (136)
16 2eng_A Endoglucanase V; cellul 95.0 0.016 5.6E-07 49.0 3.6 53 61-118 72-124 (210)
17 3nrl_A Uncharacterized protein 59.4 7.2 0.00025 27.9 3.0 24 60-83 18-41 (81)
18 2jn4_A Hypothetical protein FI 32.0 35 0.0012 24.7 2.9 61 155-220 22-84 (87)
19 2kct_A Cytochrome C-type bioge 29.9 39 0.0013 24.7 3.0 30 215-245 30-63 (94)
20 2d7n_A Filamin-C; beta-sandwic 29.2 66 0.0023 23.1 4.2 23 140-163 10-32 (93)
21 1sr3_A APO-CCME; OB fold, beta 23.6 58 0.002 25.4 3.1 30 215-245 50-80 (136)
22 2a9d_A Sulfite oxidase; molybd 22.4 1E+02 0.0036 27.8 5.1 19 179-197 283-302 (372)
23 1j6q_A Cytochrome C maturation 20.7 83 0.0028 24.5 3.5 30 215-245 54-85 (136)
24 2c9r_A COPC, copper resistance 20.5 55 0.0019 23.9 2.3 26 134-160 74-102 (102)
25 1lyq_A PCOC copper resistance 20.4 54 0.0019 24.0 2.3 26 134-160 76-104 (104)
No 1
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=100.00 E-value=1.5e-68 Score=472.29 Aligned_cols=227 Identities=45% Similarity=0.949 Sum_probs=212.2
Q ss_pred cCCCCeeEEEEEEeCCCCCCCC--CcCccCCCCCCCCCCCCCeEEEeCccccCCCcCCCcEEEEEECCCCCCCCCcEEEE
Q 044689 20 AVGTHWSTAGATWYGSPDGAGS--DGGACGYGNAVSQSPFSSFVTAIGPSLYKSGKECGACYQVKCTRHPACSGRAVRVV 97 (253)
Q Consensus 20 ~~~~~~~~G~aT~Y~~~~~~~~--~~GaCGy~~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~ 97 (253)
+-+++|+.|+||||+.+++.++ ++|||||++ ++..|++.++||+++.+|++|+.||+||||+|.+++.|++++|+|+
T Consensus 14 ~~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~-~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~~~~C~~~sv~V~ 92 (245)
T 2hcz_X 14 NYNGKWLTARATWYGQPNGAGAPDNGGACGIKN-VNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKEKPECSGNPVTVY 92 (245)
T ss_dssp CCCCCCEEEEEEECSCTTSCSSTTSCCTTCCCC-TTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCSSSSBCSSCEEEE
T ss_pred ccCCceeeeEEEEeCCCCCCCcCCCCccCCCCC-CCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCCCCccCCCCEEEE
Confidence 3457899999999999988777 799999999 6778999999999999999999999999999998888999999999
Q ss_pred EeecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCCeEEEEEEEEecCCCC-cceEEEEccCCCCceeEEEEEEec
Q 044689 98 ITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAGVLEVRYARVACDYSG-RNIAFHVDQGSNPNYLAVVVEFED 176 (253)
Q Consensus 98 V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G~~~i~wr~V~C~~~g-~ni~~~v~~GSs~~w~av~v~n~~ 176 (253)
|||+|+ |.++..|||||+.||.+||++|++++|++.|+++|+||+|+|++++ .||+|++++||++||++|+|.|++
T Consensus 93 VtD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~ni~f~v~~Gs~~~~~avlv~n~~ 169 (245)
T 2hcz_X 93 ITDMNY---EPIAPYHFDLSGKAFGSLAKPGLNDKIRHCGIMDVEFRRVRCKYPAGQKIVFHIEKGCNPNYLAVLVKYVA 169 (245)
T ss_dssp EEEECC---CTTSSSEEEECHHHHHHTBCTTCHHHHTTTCCEEEEEEEECCCCSTTCCCEEEECCCCSSSCCCEEEECCC
T ss_pred EEeccC---CCCCCccEEcCHHHHHHHhccccccccccCCEEEEEEEEEecCCCCCCcEEEEEcCCCCcceEEEEEEecC
Confidence 999997 7556899999999999999999999999999999999999999983 589999999999999999999999
Q ss_pred CCCCeeEEEEEcc-CCceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEEEEcccccCCCCCCcEEecCccc
Q 044689 177 GDGDLAGVDVKEG-SGEWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTLVANNVIPQGWMPGATYRSLVNY 251 (253)
Q Consensus 177 g~g~I~sVev~~~-~~~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~iv~~~vip~~~~~G~~y~t~~qf 251 (253)
|.++|++|||+++ .+.|++|+|+|||+|+++++.+|.+||+||||+ .+|++|++.||||++|++|++|++++||
T Consensus 170 g~g~V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~~l~gpls~RvT~-~~G~~v~~~nViP~~w~~g~ty~~~~qf 244 (245)
T 2hcz_X 170 DDGDIVLMEIQDKLSAEWKPMKLSWGAIWRMDTAKALKGPFSIRLTS-ESGKKVIAKDVIPANWRPDAVYTSNVQF 244 (245)
T ss_dssp TTCCEEEEEBCCSSSCSCBCCEEEETTEEECSCCSSCCSSCCEEEEE-TTSCEEEESCSCCSSCCTTCEEECSCCC
T ss_pred CCCCEEEEEEEeCCCCceeECccCCCCEEEECCCCCCCCCEEEEEEE-eCCcEEEEeeeecCCCCCCCEEeCcccc
Confidence 8889999999998 459999999999999998864478999999999 9999999999999999999999999999
No 2
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=100.00 E-value=1.1e-67 Score=465.59 Aligned_cols=223 Identities=46% Similarity=0.941 Sum_probs=202.0
Q ss_pred CCCCeeEEEEEEeCCCCCCCC--CcCccCCCCCCCCCCCCCeEEEeCccccCCCcCCCcEEEEEECCCCCCCCCcEEEEE
Q 044689 21 VGTHWSTAGATWYGSPDGAGS--DGGACGYGNAVSQSPFSSFVTAIGPSLYKSGKECGACYQVKCTRHPACSGRAVRVVI 98 (253)
Q Consensus 21 ~~~~~~~G~aT~Y~~~~~~~~--~~GaCGy~~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V 98 (253)
.+++|+.|+||||+.+++.++ ++|||||++ ++..|++.++||+|+.+|++|+.||+||||+|.+++.|++++|+|+|
T Consensus 15 ~~~~w~~g~AT~Yg~~~~~gt~~~gGACGyg~-~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~~~~C~~~~v~V~V 93 (241)
T 1n10_A 15 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKD-VDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTKPEACSGEPVVVHI 93 (241)
T ss_dssp CCCSCEEEEEEEEC----------CCTTCCCC-TTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECSSTTBCSCCEEEEE
T ss_pred ccCCceeeEEEEeCCCCCCCcCCCCeeCCCCC-cCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCCCCccCCCCEEEEE
Confidence 567899999999999988777 799999999 67789999999999999999999999999999987789999999999
Q ss_pred eecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCCeEEEEEEEEecCCCC-cceEEEEccCCCCceeEEEEEEecC
Q 044689 99 TDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAGVLEVRYARVACDYSG-RNIAFHVDQGSNPNYLAVVVEFEDG 177 (253)
Q Consensus 99 ~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G~~~i~wr~V~C~~~g-~ni~~~v~~GSs~~w~av~v~n~~g 177 (253)
||+|+ |.++..|||||+.||.+||++|++++|++.|+++|+||+|+|+++| .||+|+|++||++||++|+|.|+++
T Consensus 94 tD~C~---C~~~~~hfDLS~~AF~~iA~~g~~~~L~~~Gii~V~yrrV~C~~~gg~~i~f~v~~Gs~~~~~~vlv~n~~g 170 (241)
T 1n10_A 94 TDDNE---EPIAPYHFDLSGHAFGAMAKKGDEQKLRSAGELELQFRRVKCKYPEGTKVTFHVEKGSNPNYLALLVKYVNG 170 (241)
T ss_dssp EEECS---SCSSSSEEEEEHHHHHTTBSTTCHHHHHTTCSEEEEEEECCCCCCTTCCCEEEECTTCBTTEEEEEEECCCC
T ss_pred eEecC---CCCCCcceecCHHHHHHhhccCcccccccCCEEEEEEEEEeCCCCCCCceEEEEcCCCCcceEEEEEEecCC
Confidence 99995 8766899999999999999999999999999999999999999984 5899999999999999999999988
Q ss_pred CCCeeEEEEEcc-CCceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEEEEcccccCCCCCCcEEecC
Q 044689 178 DGDLAGVDVKEG-SGEWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTLVANNVIPQGWMPGATYRSL 248 (253)
Q Consensus 178 ~g~I~sVev~~~-~~~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~iv~~~vip~~~~~G~~y~t~ 248 (253)
.++|++|||+++ ++.|++|+|+|||+|+++++.+|.+||+||||+ .+|++|++.||||++|++|++|+++
T Consensus 171 ~g~V~~V~ik~~~~~~W~~m~r~wG~~W~~~~~~~l~gpls~RvT~-~~G~~v~~~nViP~~w~~g~ty~~~ 241 (241)
T 1n10_A 171 DGDVVAVDIKEKGKDKWIELKESWGAIWRIDTPDKLTGPFTVRYTT-EGGTKTEAEDVIPEGWKADTSYESK 241 (241)
T ss_dssp SSCEEEEEEEETTCCCCEECBCCTTTCEEEECSSCCCSCEEEEEEE-SSSCEEEEEEEECSSCCSSEEEEC-
T ss_pred CCCEEEEEEEeCCCCCeEECccCcCcEEEeCCCCCCCCCEEEEEEE-eCCcEEEEccccCCCCCCCCEEeCC
Confidence 889999999998 469999999999999998864578999999999 9999999999999999999999974
No 3
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=100.00 E-value=3.4e-55 Score=378.93 Aligned_cols=198 Identities=21% Similarity=0.290 Sum_probs=179.7
Q ss_pred CCCCeeEEEEEEeCCCCCCCCCcCccCCCCCCCCCCCCCeEEEeCccccCCC----cCCCcEEEEEECCCCCCCCCcEEE
Q 044689 21 VGTHWSTAGATWYGSPDGAGSDGGACGYGNAVSQSPFSSFVTAIGPSLYKSG----KECGACYQVKCTRHPACSGRAVRV 96 (253)
Q Consensus 21 ~~~~~~~G~aT~Y~~~~~~~~~~GaCGy~~~~~~~p~~~~~aA~s~~~~~~g----~~CG~C~~V~c~~~~~C~~~~v~v 96 (253)
+.++.+.|+||||+... .+||||+.. .|++.++||+++.+|++| +.||+||||+|. +++|+|
T Consensus 2 ~~~~~~~G~aT~Y~~g~----~~GACG~~~----~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~~------~gsv~V 67 (208)
T 3d30_A 2 AYDDLHEGYATYTGSGY----SGGAFLLDP----IPSDMEITAINPADLNYGGVKAALAGSYLEVEGP------KGKTTV 67 (208)
T ss_dssp CTTCCEEEEEEECSTTS----SSCTTCCCC----CCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEET------TEEEEE
T ss_pred CCCCcEEEEEEEcCCCC----CCCcCCCCC----CCCCCEEEEeCHHHhCCCCcCccccCCEEEEEeC------CCcEEE
Confidence 45678999999999753 489999875 367889999999999988 899999999983 458999
Q ss_pred EEeecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCCeEEEEEEEEecCCCCcceEEEEccCCCCceeEEEEEEec
Q 044689 97 VITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAGVLEVRYARVACDYSGRNIAFHVDQGSNPNYLAVVVEFED 176 (253)
Q Consensus 97 ~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G~~~i~wr~V~C~~~g~ni~~~v~~GSs~~w~av~v~n~~ 176 (253)
+|+|+||+ |. ..|||||+.||.+|+. ++.|+++|+||+|+|+++| +|+|++++||++||++|||+|++
T Consensus 68 ~v~D~CP~--C~--~~~~DLS~~aF~~la~-------~~~G~i~v~~~~V~C~~~G-~i~f~v~~Gs~~~~~~v~v~n~~ 135 (208)
T 3d30_A 68 YVTDLYPE--GA--RGALDLSPNAFRKIGN-------MKDGKINIKWRVVKAPITG-NFTYRIKEGSSRWWAAIQVRNHK 135 (208)
T ss_dssp EEEEECTT--CC--TTCEEECHHHHHHHSC-------GGGSSEEEEEEEECCCCCS-CCEEEECTTCSSSEEEEEEESCS
T ss_pred EEEECCCC--CC--CCeEECCHHHHHHhcc-------cCCCEEEEEEEEeCCCCCC-ceeEEEcCCCCCceEEEEEEecC
Confidence 99999999 96 7999999999999998 6899999999999999998 99999999999999999999998
Q ss_pred CCCCeeEEEEEccCCceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEEEEcccccCCCCC----CcEEecCcccc
Q 044689 177 GDGDLAGVDVKEGSGEWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTLVANNVIPQGWMP----GATYRSLVNYN 252 (253)
Q Consensus 177 g~g~I~sVev~~~~~~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~iv~~~vip~~~~~----G~~y~t~~qf~ 252 (253)
+ +|++|||+++ +.|++|+|+|+|+|..+. ++.+||+||||+ .+|++| .++||++|++ +.+|++++||+
T Consensus 136 g--~v~~v~i~~~-~~W~~m~r~~~n~~~~~~--~~~~pls~rvT~-~~G~~v--~~vip~~w~~~~~~~~~~~~~~Qf~ 207 (208)
T 3d30_A 136 Y--PVMKMEYEKD-GKWINMEKMDYNHFVSTN--LGTGSLKVRMTD-IRGKVV--KDTIPKLPESGTSKAYTVPGHVQFP 207 (208)
T ss_dssp S--CEEEEEEEET-TEEEEEEECTTSCEEEEC--CCSSSEEEEEEE-TTCCEE--EEEECCCCSSCCSSCEEEECCCCCC
T ss_pred C--CEEEEEEecC-CcEEEccccccceeecCC--CCCCCEEEEEEE-CCCCEE--EEEECCCCccCcccceEEeCcCccC
Confidence 6 8999999986 689999999998886643 567899999999 999999 7899999997 89999999996
No 4
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=99.97 E-value=6.1e-30 Score=196.44 Aligned_cols=96 Identities=25% Similarity=0.539 Sum_probs=91.3
Q ss_pred ceEEEEccCCCCceeEEEEEEecCCCCeeEEEEEccCC-ceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEEEEc
Q 044689 154 NIAFHVDQGSNPNYLAVVVEFEDGDGDLAGVDVKEGSG-EWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTLVAN 232 (253)
Q Consensus 154 ni~~~v~~GSs~~w~av~v~n~~g~g~I~sVev~~~~~-~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~iv~~ 232 (253)
+|+|+|++||++||++|+|.|++|.|+|++||||++++ .|++|+| ||++|+++++.+|.+||+||||+ .+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W~~M~r-wGa~W~~~s~~~l~GplSfRvt~-~~G~~~v~~ 80 (100)
T 3ft1_A 3 QVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTK-KGNVWEVKSSKPLVGPFNFRFMS-KGGMRNVFD 80 (100)
T ss_dssp EEEEEECTTCBTTEEEEEEEEECTTCCEEEEEEECTTCCCCEECEE-ETTEEEEECSSCCCSSEEEEEEE-TTCCEEEEE
T ss_pred CEEEEEecCCCcceEEEEEEEcCCCccEEEEEEEeCCCCCeEEecc-cCCEeEeCCCCCCCCCEEEEEEE-cCCcEEEEC
Confidence 69999999999999999999999999999999999854 7999999 99999998755688999999999 999999999
Q ss_pred ccccCCCCCCcEEecCccc
Q 044689 233 NVIPQGWMPGATYRSLVNY 251 (253)
Q Consensus 233 ~vip~~~~~G~~y~t~~qf 251 (253)
||||++|++|++|++++||
T Consensus 81 nViPa~W~~G~ty~s~vq~ 99 (100)
T 3ft1_A 81 EVIPTAFSIGKTYKPEEQE 99 (100)
T ss_dssp EEECTTCCTTCEECCCCBC
T ss_pred eEeCCCCCCCcEEeccccc
Confidence 9999999999999999998
No 5
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.96 E-value=1e-29 Score=211.71 Aligned_cols=116 Identities=28% Similarity=0.444 Sum_probs=98.3
Q ss_pred CCeeEEEEEEeCCCCCCCCCcCccCCCCC----CCCCCCCCeEEEeCccccCCC------cCCCcEEEEEECCCC-----
Q 044689 23 THWSTAGATWYGSPDGAGSDGGACGYGNA----VSQSPFSSFVTAIGPSLYKSG------KECGACYQVKCTRHP----- 87 (253)
Q Consensus 23 ~~~~~G~aT~Y~~~~~~~~~~GaCGy~~~----~~~~p~~~~~aA~s~~~~~~g------~~CG~C~~V~c~~~~----- 87 (253)
..|..++||||++. ++|||||+++ +.+++++.++||||++||++| +.||+||||+|++.+
T Consensus 12 ~g~~~A~aT~Yg~~-----~gGACGyG~~~~~~l~~~gyg~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg 86 (181)
T 1wc2_A 12 NGKSCASTTNYHDS-----HKGACGCGPASGDAQFGWNAGSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQG 86 (181)
T ss_dssp TTEEEEEEEEECCC-----BCTTTTCSCSSSSBCCSSGGGSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSC
T ss_pred CCccccceeEecCC-----CCcccCcCcCCCCCccccCCcceeeecCHHHhCCCccccccccCCCcEEEEcCCCCccccc
Confidence 56999999999985 5999999931 456678999999999999997 899999999997642
Q ss_pred -CC-CCCcEEEEEeecCCC-----CCCCCC-----------CCcEEcChHHHhhccCCCcccccccCCeEEEEEEEEecC
Q 044689 88 -AC-SGRAVRVVITDFCPG-----GPCVSE-----------SAHFDLSGTAFGAMAIPGQEEKLRDAGVLEVRYARVACD 149 (253)
Q Consensus 88 -~C-~~~~v~v~V~D~Cp~-----~~C~~~-----------~~~~DLs~~AF~~ia~~~~~~~~~~~G~~~i~wr~V~C~ 149 (253)
.| .+++|+|||||+||. +||.++ +.||||+.+| .+|+. ...|+++|+||+|+|+
T Consensus 87 ~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~G~~~HFDLs~pa-~~Ia~-------~~~GivpV~yrrV~C~ 158 (181)
T 1wc2_A 87 GPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKYGYELHLDLENGR-SQVTG-------MGWNNPETTWEVVNCD 158 (181)
T ss_dssp CCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTTSCSEEEEEECTT-STTGG-------GTCSSEEEEEEEECHH
T ss_pred ccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCcccccCccccccccchH-HHhhh-------hcCCCceeEEEEEeCC
Confidence 12 366899999999993 399653 6899999999 88987 6789999999999998
Q ss_pred CC
Q 044689 150 YS 151 (253)
Q Consensus 150 ~~ 151 (253)
..
T Consensus 159 ~~ 160 (181)
T 1wc2_A 159 SE 160 (181)
T ss_dssp HH
T ss_pred CC
Confidence 63
No 6
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=99.95 E-value=5e-28 Score=187.81 Aligned_cols=97 Identities=28% Similarity=0.584 Sum_probs=90.7
Q ss_pred CCcceEEEEccCCCCceeEEEEEEecCCCCeeEEEEEc-cCCceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEE
Q 044689 151 SGRNIAFHVDQGSNPNYLAVVVEFEDGDGDLAGVDVKE-GSGEWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTL 229 (253)
Q Consensus 151 ~g~ni~~~v~~GSs~~w~av~v~n~~g~g~I~sVev~~-~~~~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~i 229 (253)
.|.||.|+|+++|++||++|+|.|++|.|+|++||||+ +.+.|++|+|+ |++|+++++.+|.+||+||||+ .+|+++
T Consensus 11 ~g~~v~f~V~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W~~M~rn-Ga~W~~~s~~~L~GplSfRvtt-s~G~~~ 88 (108)
T 2jnz_A 11 SAVQVTFTVQKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEWEPLTKK-GNVWEVKSSKPLVGPFNFRFMS-KGGMRN 88 (108)
T ss_dssp CCCEEEEEECTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCCEECEEE-TTEEEEECSSCCCSSEEEEEEE-TTTEEE
T ss_pred CCccEEEEEecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcEeEcccc-CCEeEeCCCCCCCCCEEEEEEE-cCCcEE
Confidence 35699999999999999999999999999999999997 47789999999 9999998755688999999999 999999
Q ss_pred EEcccccCCCCCCcEEecCc
Q 044689 230 VANNVIPQGWMPGATYRSLV 249 (253)
Q Consensus 230 v~~~vip~~~~~G~~y~t~~ 249 (253)
++.||||++|++|++|++.+
T Consensus 89 va~nViPa~W~~Gqty~s~v 108 (108)
T 2jnz_A 89 VFDEVIPTAFSIGKTYKPEE 108 (108)
T ss_dssp EEEEEECSSCCTTCEECCCC
T ss_pred EECeEECCCCCCCCEEeCCC
Confidence 99999999999999999874
No 7
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=99.93 E-value=3.4e-28 Score=185.59 Aligned_cols=93 Identities=33% Similarity=0.627 Sum_probs=86.2
Q ss_pred ceEEEEccCCCCceeEEEEEEecCCCCeeEEEEEcc-CCceEEccccCcceeEeCCCCCCCCCeEEEEEEeeCCeEEEEc
Q 044689 154 NIAFHVDQGSNPNYLAVVVEFEDGDGDLAGVDVKEG-SGEWRAMQQSWGATWKLDAGSELHPPLSLRLTSQYSSQTLVAN 232 (253)
Q Consensus 154 ni~~~v~~GSs~~w~av~v~n~~g~g~I~sVev~~~-~~~w~~m~r~~g~~W~~~~~~~~~~p~~~RvT~~~~G~~iv~~ 232 (253)
+|+|+|++||++||++|+|.|++ |+|++|||+++ .+.|++|+|+||++|+++++.+|.+||+||||+ .+|+++++.
T Consensus 3 ~i~F~V~~gs~~~~l~vlv~nv~--gdI~~V~ik~~~~~~W~~M~r~wGa~W~~~~~~~L~GplSfRvt~-~~G~~~v~~ 79 (96)
T 1bmw_A 3 KVTFTVEKGSNEKHLAVLVKYEG--DTMAEVELREHGSDEWVAMTKGEGGVWTFDSEEPLQGPFNFRFLT-EKGMKNVFD 79 (96)
T ss_dssp CCCCCCCTTCSSSBCCBCCCCSS--SCCCCCEECCSSSSSCEECBCCSSSSBBCBCCSSCCCCCCBCCEE-TTTEECCBS
T ss_pred CEEEEEecCCCCceEEEEEEEeC--CCEEEEEEEECCCCcEEECccCcCceeEeCCCCCCCCCEEEEEEE-cCCcEEEEe
Confidence 69999999999999999999998 69999999995 789999999999999998865688999999999 999999999
Q ss_pred ccccCCCCCCcEEecCc
Q 044689 233 NVIPQGWMPGATYRSLV 249 (253)
Q Consensus 233 ~vip~~~~~G~~y~t~~ 249 (253)
||||++|++|++|++++
T Consensus 80 nViP~~W~~G~ty~~~~ 96 (96)
T 1bmw_A 80 DVVPEKYTIGATYAPEE 96 (96)
T ss_dssp SCSCSSCCSSSCCCC--
T ss_pred eEeCCCCCCCCEEeCCC
Confidence 99999999999999863
No 8
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.67 E-value=4.6e-17 Score=128.90 Aligned_cols=92 Identities=25% Similarity=0.416 Sum_probs=67.6
Q ss_pred CcCccCCCCCCCCCCC----CCeEEEeCcccc-CCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEc
Q 044689 42 DGGACGYGNAVSQSPF----SSFVTAIGPSLY-KSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDL 116 (253)
Q Consensus 42 ~~GaCGy~~~~~~~p~----~~~~aA~s~~~~-~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DL 116 (253)
..++|+--+ ...|. .....|+..++. ++++.||+|++|++.. ++++|+|+|+|+||. | +|||
T Consensus 27 ~s~~C~t~d--a~~~~~~~~~y~wtA~~g~~gp~~g~~CG~cv~Vtn~~----nGksV~V~VvD~CP~--g-----gLDL 93 (125)
T 1bw3_A 27 VSAYCATWD--ASKPLSWRSKYGWTAFCGPAGPRGQAACGKCLRVTNPA----TGAQITARIVDQCAN--G-----GLDL 93 (125)
T ss_dssp TCCTTHHHH--TTSCHHHHHHSCCEESCSTTCCCSGGGTTCEEEEEETT----TTEEEEEEEEECCSS--S-----SCCS
T ss_pred eeEeeeccc--CCCceeEecCCCceEeccCCCCCCCcccCCEEEeEeCC----CCCEEEEEEEEeCCC--C-----CCCC
Confidence 568998532 11111 012244443444 7789999999999754 278999999999997 4 3999
Q ss_pred C-hHHHhhccCCCcccccccCCeEEEEEEEEecC
Q 044689 117 S-GTAFGAMAIPGQEEKLRDAGVLEVRYARVACD 149 (253)
Q Consensus 117 s-~~AF~~ia~~~~~~~~~~~G~~~i~wr~V~C~ 149 (253)
| ++||++|+.+++. ++.|+++|+|++|+|+
T Consensus 94 S~~~AF~~Ia~~g~G---~~~G~i~V~w~~V~C~ 124 (125)
T 1bw3_A 94 DWDTVFTKIDTNGIG---YQQGHLNVNYQFVDCR 124 (125)
T ss_dssp CSSSSHHHHCSSCHH---HHHSEEEEEEEEECCC
T ss_pred CCHHHHHHHhccCCc---ccCcEEEEEEEEEeCC
Confidence 9 9999999975321 4689999999999997
No 9
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.24 E-value=7.6e-11 Score=89.00 Aligned_cols=92 Identities=27% Similarity=0.269 Sum_probs=73.2
Q ss_pred eEEEEEEeCCC-CCCCCCcCccCCCCCCCCCCCCCeEEEeCccccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCC
Q 044689 26 STAGATWYGSP-DGAGSDGGACGYGNAVSQSPFSSFVTAIGPSLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPG 104 (253)
Q Consensus 26 ~~G~aT~Y~~~-~~~~~~~GaCGy~~~~~~~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~ 104 (253)
..|.|+||+.. .| ...|||=.- + ...++||-.+ ..||..++|+.... +++|+|+|.|+||-
T Consensus 2 ~~G~ASwYg~~f~G---~~TA~Ge~~--~---~~~~tAAH~t------lP~gt~vrVtNl~n----GksVvVrVnDRGP~ 63 (95)
T 4avr_A 2 DTGEASYYGSRHAG---LRTASGERY--N---PNAMTAAHRT------LPFGARVRVTNLDN----RRSVVVRINDRGPF 63 (95)
T ss_dssp EEEEEEECCGGGTT---SBCTTSCBC--C---TTSCEEECSS------SCTTCEEEEEETTT----CCEEEEEEEECCCC
T ss_pred CEEEEEEECCccCC---CCCCCccCc--C---CCCCEEEcCC------CCCCcEEEEEECCC----CcEEEEEEccCCCC
Confidence 47999999963 22 267887543 1 2457888763 47999999996543 89999999999998
Q ss_pred CCCCCCCCcEEcChHHHhhccCCCcccccccCCeEEEEEEEE
Q 044689 105 GPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAGVLEVRYARV 146 (253)
Q Consensus 105 ~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G~~~i~wr~V 146 (253)
|. ...+|||++||.+|+. .+.|+.+|+|+.+
T Consensus 64 --~~--griIDLS~aAa~~Lg~-------~~~G~~~V~ve~~ 94 (95)
T 4avr_A 64 --RR--GRIIDVSRKAAEGLGM-------IRSGVAPVRIESL 94 (95)
T ss_dssp --ST--TEEEEECHHHHHHHTC-------TTTSCEEEEEEEC
T ss_pred --CC--CCEEEeCHHHHHHhCC-------cCCCEEEEEEEEe
Confidence 76 5789999999999987 6899999999976
No 10
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.14 E-value=7.7e-06 Score=64.57 Aligned_cols=85 Identities=25% Similarity=0.444 Sum_probs=63.2
Q ss_pred cCccCCCC--C------CCCCCCCCeEEEeCc-cccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCc
Q 044689 43 GGACGYGN--A------VSQSPFSSFVTAIGP-SLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAH 113 (253)
Q Consensus 43 ~GaCGy~~--~------~~~~p~~~~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~ 113 (253)
.-+|+=+. + +.+.|.-.+|.+... .-|+ ...||.|+||+-. .+++|.|+.+|.-+ +.
T Consensus 26 ~vaCSdG~nGL~tky~t~g~lp~FP~IGga~~iagWN-S~~CGtC~~lty~-----ng~sI~vlaID~A~--------~g 91 (129)
T 2kqa_A 26 SVACSNGDHGLMAQYPTLGEVPGFPNVGGIPDIAGWD-SPSCGTCWKVTIP-----NGNSIFIRGVDSGR--------GG 91 (129)
T ss_dssp GSSCCSTTTCSTTTCSBSSSSSCSSSEEEETTCCSTT-CTTCSCEEEEEET-----TTEEEEEEEEEECS--------SS
T ss_pred eEEecCCCCCceecCcccccCCCCCeeccchhhccCC-CCCCCceEEEEEc-----CCCEEEEEEEccCC--------Cc
Confidence 46776543 0 223343345666544 4576 7999999999963 26899999999953 45
Q ss_pred EEcChHHHhhccCCCcccccccCCeE-EEEEEEEe
Q 044689 114 FDLSGTAFGAMAIPGQEEKLRDAGVL-EVRYARVA 147 (253)
Q Consensus 114 ~DLs~~AF~~ia~~~~~~~~~~~G~~-~i~wr~V~ 147 (253)
|+++.+||+.|.+. ...|++ +++|++|+
T Consensus 92 FnIs~~Amn~LT~G------~~lG~V~~a~~~qV~ 120 (129)
T 2kqa_A 92 FNVNPTAFTKLVGS------TEAGRVDNVNYVQVD 120 (129)
T ss_dssp EEECHHHHHHHHSS------SSSCCBCSCEEEECC
T ss_pred eeehHHHHHHhcCC------cccCcEeEEEEEEcC
Confidence 99999999999984 468999 99999986
No 11
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.11 E-value=8.3e-06 Score=63.83 Aligned_cols=75 Identities=20% Similarity=0.453 Sum_probs=56.4
Q ss_pred CCCCCeEEEeCc-cccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcChHHHhhccCCCccccc
Q 044689 55 SPFSSFVTAIGP-SLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKL 133 (253)
Q Consensus 55 ~p~~~~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~ 133 (253)
.|.-.+|.+... .-|++ ..||.|+|++-. +++|.|+.+|.-+ ..|+|+.+||+.|.+ |++
T Consensus 40 lp~FP~IGg~~~i~gwns-~~CGtC~~lty~------g~si~vlaID~a~--------~Gfnis~~A~n~LT~-G~a--- 100 (120)
T 3m3g_A 40 IPRFPYIGGAAAVAGWNS-ASCGTCWKLQYS------GHTIYVLAVDHAA--------SGFNIALDAMNALTG-GQA--- 100 (120)
T ss_dssp STTTTSEEEETTCCSTTC-TTTTCEEEEEET------TEEEEEEEEEECS--------SSEEECHHHHHHHHT-SCH---
T ss_pred CCCCCccccccccccCCC-CCCCceEEEEEC------CeEEEEEEEecCC--------CceeecHHHHHHhhC-Ccc---
Confidence 333345666543 45654 789999999962 6899999999953 459999999999996 332
Q ss_pred ccCCeEEEEEEEEec
Q 044689 134 RDAGVLEVRYARVAC 148 (253)
Q Consensus 134 ~~~G~~~i~wr~V~C 148 (253)
...|++++++++|+=
T Consensus 101 ~~lG~V~a~~~~V~~ 115 (120)
T 3m3g_A 101 VQLGRVSATATQVPV 115 (120)
T ss_dssp HHHCEEECEEEEECG
T ss_pred eeeeeEeEEEEEcCH
Confidence 345999999999973
No 12
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.07 E-value=1.3e-05 Score=62.99 Aligned_cols=71 Identities=25% Similarity=0.462 Sum_probs=55.4
Q ss_pred EEEeCc-cccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCCeE
Q 044689 61 VTAIGP-SLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAGVL 139 (253)
Q Consensus 61 ~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G~~ 139 (253)
|.+... +-|++ ..||.|+|++-.. .++++.|..+|.-+ ..|+|+.+||+.|.+. ++ ...|++
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~----~g~si~vlaID~a~--------~Gfnis~~Amn~LT~G-~a---~~lG~V 108 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSG----TGKTIHVVGVDVAG--------NGFNVGQRAMDDLTNG-QA---VALGNI 108 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETT----TTEEEEEEEEEECS--------SSEEECHHHHHHHHTS-CH---HHHSEE
T ss_pred cccccccccCCC-CCCCceEEEEEcC----CCcEEEEEEEecCC--------CceeehHHHHHHhcCC-cc---eecceE
Confidence 655543 45766 9999999999642 36899999999954 3499999999999963 32 346999
Q ss_pred EEEEEEEec
Q 044689 140 EVRYARVAC 148 (253)
Q Consensus 140 ~i~wr~V~C 148 (253)
++++++|+-
T Consensus 109 ~a~~~qV~~ 117 (122)
T 3sul_A 109 DVTATLVDK 117 (122)
T ss_dssp EEEEEEECG
T ss_pred eEEEEEcCH
Confidence 999999973
No 13
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.98 E-value=1.5e-05 Score=62.79 Aligned_cols=75 Identities=21% Similarity=0.398 Sum_probs=56.0
Q ss_pred CeEEEeCc-cccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCC
Q 044689 59 SFVTAIGP-SLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAG 137 (253)
Q Consensus 59 ~~~aA~s~-~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G 137 (253)
-+|.+... .-|++ ..||.|+|++-.++. ..+++.|..+|.-+ ..|+|+.+||+.|.+. ++ ...|
T Consensus 45 P~IGg~~~i~gwnS-~~CGtC~~lty~g~~--~~~si~vlaID~a~--------~Gfnis~~Amn~LT~G-~a---~~lG 109 (125)
T 3suk_A 45 PHIGASSDIGGFNS-PACGNCYTISFTFQG--VTRSINLVAIDHAG--------NGFNVAQAAMDELTNG-NA---VALG 109 (125)
T ss_dssp TSEEEETTCCSTTC-TTTTCEEEEEEEETT--EEEEEEEEEEEECS--------SSEEECHHHHHHHHTS-CH---HHHC
T ss_pred CeeccccccccCCC-CCCCeeEEEEEcCCC--cceEEEEEEEecCC--------CceeecHHHHHHhcCC-cc---cccc
Confidence 45666544 45654 789999999974331 23799999999954 3499999999999973 32 3459
Q ss_pred eEEEEEEEEec
Q 044689 138 VLEVRYARVAC 148 (253)
Q Consensus 138 ~~~i~wr~V~C 148 (253)
+++++|++|+-
T Consensus 110 ~V~~~~~~V~~ 120 (125)
T 3suk_A 110 TIDVQSQQVAR 120 (125)
T ss_dssp EEEEEEEEECG
T ss_pred eEeEEEEEcCH
Confidence 99999999973
No 14
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=97.92 E-value=2.5e-05 Score=61.64 Aligned_cols=76 Identities=20% Similarity=0.380 Sum_probs=55.8
Q ss_pred CeEEEeC-ccccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcChHHHhhccCCCcccccccCC
Q 044689 59 SFVTAIG-PSLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQEEKLRDAG 137 (253)
Q Consensus 59 ~~~aA~s-~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~~~~~~~~G 137 (253)
-+|.+.. -.-|++ ..||.|+|++-.++. -..++|.|+.+|.-+ ..|+|+.+||+.|.+. ++ ...|
T Consensus 44 P~IGg~~~i~gwns-~~CGtC~~lty~g~~-~~~~si~vlaID~a~--------~Gfnis~~Amn~LT~g-~a---~~lG 109 (127)
T 3suj_A 44 PCIGGSSDIAGYNS-PNCGSCYQLTYSSAH-TTPKSIYMVAIDRSA--------EGFTASKQAMDDLTNK-RA---EELG 109 (127)
T ss_dssp TSEEEETTCCSTTC-TTTTCEEEEEECCSS-SCCEEEEEEEEEECS--------SSEEECHHHHHHHHTS-CH---HHHS
T ss_pred CeeccccccccCCC-CCCCceEEEEECCCC-CcceEEEEEEEecCC--------CceeecHHHHHHhcCC-cc---ccce
Confidence 4466554 345654 789999999975311 123799999999954 3499999999999963 22 3558
Q ss_pred eEEEEEEEEec
Q 044689 138 VLEVRYARVAC 148 (253)
Q Consensus 138 ~~~i~wr~V~C 148 (253)
+++++|++|+-
T Consensus 110 ~V~~~~~~V~~ 120 (127)
T 3suj_A 110 TVNVDVRKVDF 120 (127)
T ss_dssp SEEEEEEEECG
T ss_pred eEEEEEEEeCH
Confidence 99999999974
No 15
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=97.72 E-value=8.8e-05 Score=58.93 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=56.1
Q ss_pred CCCCCeEEEeCccccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcChHHHhhccCCCc-cccc
Q 044689 55 SPFSSFVTAIGPSLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSGTAFGAMAIPGQ-EEKL 133 (253)
Q Consensus 55 ~p~~~~~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~~AF~~ia~~~~-~~~~ 133 (253)
.|.--.|.+.. | +...||.|+||+-. +++|.|..+|.-.+ ..-|||+.+||+.|.+. + +.+.
T Consensus 44 lp~FP~igg~~---w-ns~~CGtCwkLtY~------G~sI~vlaID~a~~------g~~FnIs~~Amn~LT~G-~~a~~a 106 (136)
T 3sum_A 44 VLNFPHFVAAP---E-AQTECGSCWKLRYK------GNHAFVTVVDRVEE------ANLFVGGTDLVKNLTTF-NGAPEG 106 (136)
T ss_dssp STTTTSEEECC---B-TTBCTTCEEEEEET------TEEEEEEEEECCCS------TTEEEECHHHHHHHTCB-TTBCHH
T ss_pred cCCCCcccccc---c-CCCCCCceEEEEEC------CeEEEEEEEecCCC------cceEeehHHHHHHHhCC-Cccccc
Confidence 33334566665 5 45899999999963 68999999999532 11399999999999863 2 0011
Q ss_pred ccCCeEEE-EEEEEecC
Q 044689 134 RDAGVLEV-RYARVACD 149 (253)
Q Consensus 134 ~~~G~~~i-~wr~V~C~ 149 (253)
...|++++ +|++|+-.
T Consensus 107 ~elG~Vda~~~~qVd~S 123 (136)
T 3sum_A 107 YDWGTAQLFSAYQVDGS 123 (136)
T ss_dssp HHHSEEECSEEEEECGG
T ss_pred eecceeeeeEEEEcCHH
Confidence 45699999 99999743
No 16
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=94.97 E-value=0.016 Score=48.99 Aligned_cols=53 Identities=26% Similarity=0.319 Sum_probs=34.8
Q ss_pred EEEeCccccCCCcCCCcEEEEEECCCCCCCCCcEEEEEeecCCCCCCCCCCCcEEcCh
Q 044689 61 VTAIGPSLYKSGKECGACYQVKCTRHPACSGRAVRVVITDFCPGGPCVSESAHFDLSG 118 (253)
Q Consensus 61 ~aA~s~~~~~~g~~CG~C~~V~c~~~~~C~~~~v~v~V~D~Cp~~~C~~~~~~~DLs~ 118 (253)
+||.+..--.....|++||+++=++. ...+|+.+|+||+...+ -..+||||..
T Consensus 72 FaA~~~~g~~e~~~Cc~C~~LtFt~~-~~~GKkmiVQ~TNtG~D----l~~n~FDl~i 124 (210)
T 2eng_A 72 FAATSIAGSNEAGWCCACYELTFTSG-PVAGKKMVVQSTSTGGD----LGSNHFDLNI 124 (210)
T ss_dssp EEEEECTTCCHHHHTTCEEEEEECSG-GGTTCEEEEEEEEC---------CCEEEEEC
T ss_pred eeeeeccCCccccccceeEEEEEcCC-CcCCCEEEEEEecccCC----CCCCceeEec
Confidence 56665331122367999999997653 24589999999999876 2369999964
No 17
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=59.38 E-value=7.2 Score=27.88 Aligned_cols=24 Identities=25% Similarity=0.672 Sum_probs=17.5
Q ss_pred eEEEeCccccCCCcCCCcEEEEEE
Q 044689 60 FVTAIGPSLYKSGKECGACYQVKC 83 (253)
Q Consensus 60 ~~aA~s~~~~~~g~~CG~C~~V~c 83 (253)
+-+-.+...|.+|..||.|+||.-
T Consensus 18 ydi~~~~~~~ygGlHCGE~feV~v 41 (81)
T 3nrl_A 18 YDIRFDLESFYGGLHCGECFDVKV 41 (81)
T ss_dssp EEEEEETTEECCCCCTTCEEEEEE
T ss_pred EEEEeccccccCCcccccEEEEEE
Confidence 333344556778999999999974
No 18
>2jn4_A Hypothetical protein FIXU, NIFT; structural genomics, PSI-2, protein structure initiative, northeast ST genomics consortium, NESG; NMR {Rhodopseudomonas palustris} SCOP: b.173.1.1
Probab=31.98 E-value=35 Score=24.67 Aligned_cols=61 Identities=11% Similarity=0.216 Sum_probs=31.3
Q ss_pred eEEEEccCCCCceeEEEEEEecCCCCeeEEEEEcc-CCceEEccccCcceeEeCCCC-CCCCCeEEEE
Q 044689 155 IAFHVDQGSNPNYLAVVVEFEDGDGDLAGVDVKEG-SGEWRAMQQSWGATWKLDAGS-ELHPPLSLRL 220 (253)
Q Consensus 155 i~~~v~~GSs~~w~av~v~n~~g~g~I~sVev~~~-~~~w~~m~r~~g~~W~~~~~~-~~~~p~~~Rv 220 (253)
+++.+...+.. +.+.|.--.-.-+|.+|| +.. .+.|..|.+.| .|.++.-. ++.-|++||.
T Consensus 22 MKVMIR~~~~G--Ls~YVpKKDLEE~VVs~E-~~~~WGG~vtLaNGw--~l~lp~l~~~~~LPiTveA 84 (87)
T 2jn4_A 22 MKVMIRKTATG--HSAYVAKKDLEELIVEME-NPALWGGKVTLANGW--QLELPAMAADTPLPITVEA 84 (87)
T ss_dssp CCEEEEECSSC--EEEEETTTTEEEEEEEES-SSSSCSSEEEETTSC--EEECCCCSSSCSSCEEECC
T ss_pred CeEEEEeCCCc--eEEEEeCCcchhheeeee-cccccCcEEEECCcc--EEEeCCCCCCCCCCEEEEE
Confidence 55556544443 555553222222444444 222 56678887765 55665421 2345888764
No 19
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=29.90 E-value=39 Score=24.67 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=21.4
Q ss_pred CeEEEEEEee--CCeE--EEEcccccCCCCCCcEE
Q 044689 215 PLSLRLTSQY--SSQT--LVANNVIPQGWMPGATY 245 (253)
Q Consensus 215 p~~~RvT~~~--~G~~--iv~~~vip~~~~~G~~y 245 (253)
.++|+||+ . .+++ |++..++|..|+.|+-.
T Consensus 30 ~v~F~vtD-~~~~~~~v~V~Y~GilPDlFrEGqgV 63 (94)
T 2kct_A 30 GVRFRLED-KDNTSKTVWVLYKGAVPDTFKPGVEV 63 (94)
T ss_dssp EEEEEEEC-SSCTTCEEEEEEESCCCTTCCTTCEE
T ss_pred EEEEEEEc-CCCCCcEEEEEECCCCCccccCCCeE
Confidence 57888888 4 1443 45578999999988643
No 20
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=29.16 E-value=66 Score=23.06 Aligned_cols=23 Identities=9% Similarity=-0.006 Sum_probs=14.6
Q ss_pred EEEEEEEecCCCCcceEEEEccCC
Q 044689 140 EVRYARVACDYSGRNIAFHVDQGS 163 (253)
Q Consensus 140 ~i~wr~V~C~~~g~ni~~~v~~GS 163 (253)
+.++ .++|...+.+|.+.+..-+
T Consensus 10 p~~f-~i~~~~g~~~l~v~V~~Ps 32 (93)
T 2d7n_A 10 PFNL-VIPFAVQKGELTGEVRMPS 32 (93)
T ss_dssp CEEE-EECCCCSSSCEEEEEECTT
T ss_pred CEEE-EEEcCCCCCCEEEEEECCC
Confidence 5555 5677765556777776544
No 21
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=23.63 E-value=58 Score=25.44 Aligned_cols=30 Identities=7% Similarity=0.224 Sum_probs=21.1
Q ss_pred CeEEEEEEeeCCe-EEEEcccccCCCCCCcEE
Q 044689 215 PLSLRLTSQYSSQ-TLVANNVIPQGWMPGATY 245 (253)
Q Consensus 215 p~~~RvT~~~~G~-~iv~~~vip~~~~~G~~y 245 (253)
.++|+||+ .... .|+...++|..|+.|+-.
T Consensus 50 ~v~F~vtD-~~~~v~V~Y~GilPDlFrEGqgV 80 (136)
T 1sr3_A 50 KVTFTIYD-AEGSVDVSYEGILPDLFREGQGV 80 (136)
T ss_dssp EEEEEEEC-SSCEEEEEEESCCCTTCCTTSEE
T ss_pred EEEEEEEe-CCcEEEEEECCCCCccccCCCeE
Confidence 58888888 4333 345578999999887643
No 22
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=22.40 E-value=1e+02 Score=27.82 Aligned_cols=19 Identities=21% Similarity=0.503 Sum_probs=15.3
Q ss_pred CCeeEEEEEcc-CCceEEcc
Q 044689 179 GDLAGVDVKEG-SGEWRAMQ 197 (253)
Q Consensus 179 g~I~sVev~~~-~~~w~~m~ 197 (253)
.+|++|||... +.+|+...
T Consensus 283 ~~I~rVEVS~DgG~tW~~A~ 302 (372)
T 2a9d_A 283 REVVRVDVSLDGGRTWKVAR 302 (372)
T ss_dssp CCEEEEEEESBSSSSCEECE
T ss_pred CCEEEEEEEcCCCCcceEeE
Confidence 35999999998 66998644
No 23
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=20.73 E-value=83 Score=24.48 Aligned_cols=30 Identities=7% Similarity=0.192 Sum_probs=21.9
Q ss_pred CeEEEEEEeeCCe--EEEEcccccCCCCCCcEE
Q 044689 215 PLSLRLTSQYSSQ--TLVANNVIPQGWMPGATY 245 (253)
Q Consensus 215 p~~~RvT~~~~G~--~iv~~~vip~~~~~G~~y 245 (253)
.++|+||+ ..++ .|+...++|..|+.|+-.
T Consensus 54 ~v~F~vtD-~~~~~v~V~Y~GilPDlFrEGqgV 85 (136)
T 1j6q_A 54 HVQFAVHD-SLGGEILVTYDDLLPDLFREGQGI 85 (136)
T ss_dssp CEEEEEEC-TTCCCEEEEECSCCTTSCCSSSEE
T ss_pred EEEEEEEc-CCCCEEEEEECCCCCccccCCCeE
Confidence 68888888 4454 455678999999887643
No 24
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=20.53 E-value=55 Score=23.88 Aligned_cols=26 Identities=31% Similarity=0.585 Sum_probs=19.9
Q ss_pred ccCCeEEEEEEEEecCC---CCcceEEEEc
Q 044689 134 RDAGVLEVRYARVACDY---SGRNIAFHVD 160 (253)
Q Consensus 134 ~~~G~~~i~wr~V~C~~---~g~ni~~~v~ 160 (253)
+..|.+.|+||.|+=+- .| .+.|.|+
T Consensus 74 L~~G~YtV~WrvvS~DGH~~~G-~~~FtV~ 102 (102)
T 2c9r_A 74 LTAGTYKVDWRAVSSDTFPITG-SVTFKVK 102 (102)
T ss_dssp CCSEEEEEEEEECCTTCCCEEE-EEEEEEC
T ss_pred CCCceEEEEEEEEecCCCccCC-EEEEEEC
Confidence 67899999999999763 23 6777664
No 25
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=20.42 E-value=54 Score=24.04 Aligned_cols=26 Identities=35% Similarity=0.543 Sum_probs=20.0
Q ss_pred ccCCeEEEEEEEEecCC---CCcceEEEEc
Q 044689 134 RDAGVLEVRYARVACDY---SGRNIAFHVD 160 (253)
Q Consensus 134 ~~~G~~~i~wr~V~C~~---~g~ni~~~v~ 160 (253)
+..|.+.|+||.|+=+- .| .+.|.|+
T Consensus 76 L~~G~YtV~WrvvS~DGH~~~G-~~~FtV~ 104 (104)
T 1lyq_A 76 LPAGTYRVDWRAVSSDTHPITG-NYTFTVK 104 (104)
T ss_dssp CCSEEEEEEEEECCTTSCCEEE-EEEEEEC
T ss_pred CCCceEEEEEEEEecCCCccCC-EEEEEEC
Confidence 67899999999999763 23 6777664
Done!