AmiGO: BLAST Results


BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 Ribosomal protein, putative	gene from Plasmodium falciparum	1.1e-12
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 60S ribosomal protein L35Ae, putative	protein from Plasmodium falciparum 3D7	1.1e-12
BLAST match view associations BLAST with rpl35a rpl35a rpl35a S60 ribosomal protein L35a	gene from Dictyostelium discoideum	1.6e-10
BLAST match view associations BLAST with rpl-33 rpl-33 rpl-33	gene from Caenorhabditis elegans	4.2e-10
BLAST match view associations BLAST with RPL33B RPL33B RPL33B Ribosomal 60S subunit protein L33B	gene from Saccharomyces cerevisiae	1.4e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Gallus gallus	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Bos taurus	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Sus scrofa	2.8e-09
BLAST match view associations BLAST with LOC100362049 LOC100362049 LOC100362049 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with LOC100359825 LOC100359825 LOC100359825 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with LOC100362957 LOC100362957 LOC100362957 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with Rpl35a Rpl35a Rpl35a ribosomal protein L35a	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with RPL33A RPL33A RPL33A Ribosomal 60S subunit protein L33A	gene from Saccharomyces cerevisiae	2.8e-09
BLAST match view associations BLAST with LOC100362338 LOC100362338 LOC100362338 ribosomal protein L35a-like	gene from Rattus norvegicus	9.2e-09
BLAST match view associations BLAST with MGG_09927 MGG_09927 MGG_09927 60S ribosomal protein L33-B	protein from Magnaporthe oryzae 70-15	1.9e-08
BLAST match view associations BLAST with AT1G74270 AT1G74270 AT1G74270	protein from Arabidopsis thaliana	2.0e-08
BLAST match view associations BLAST with AT1G07070 AT1G07070 AT1G07070	protein from Arabidopsis thaliana	2.0e-08
BLAST match view associations BLAST with LOC781576 LOC781576 LOC781576 Uncharacterized protein	protein from Bos taurus	3.8e-08
BLAST match view associations BLAST with RGD1560900 RGD1560900 RGD1560900 similar to ribosomal protein L35a	gene from Rattus norvegicus	4.8e-08
BLAST match view associations BLAST with F1M0T2 F1M0T2 F1M0T2 Uncharacterized protein	protein from Rattus norvegicus	4.8e-08
BLAST match view associations BLAST with AT1G41880 AT1G41880 AT1G41880	protein from Arabidopsis thaliana	6.8e-08
BLAST match view associations BLAST with AT3G55750 AT3G55750 AT3G55750	protein from Arabidopsis thaliana	6.8e-08
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	8.3e-07
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.7e-06
BLAST match view associations BLAST with rpl35a rpl35a rpl35a ribosomal protein L35a	gene_product from Danio rerio	7.0e-06
BLAST match view associations BLAST with E1BHM9 E1BHM9 E1BHM9 Uncharacterized protein	protein from Bos taurus	8.1e-05
BLAST match view associations BLAST with RpL35A RpL35A RpL35A Ribosomal protein L35A	protein from Drosophila melanogaster	0.00068

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  044692
        (61 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

GENEDB_PFALCIPARUM|PF11_0438 - symbol:PF11_0438 "Ribosoma...   124  1.1e-12   2
UNIPROTKB|Q8IHT9 - symbol:PF11_0438 "60S ribosomal protei...   124  1.1e-12   2
DICTYBASE|DDB_G0270424 - symbol:rpl35a "S60 ribosomal pro...    93  1.6e-10   2
ASPGD|ASPL0000041158 - symbol:AN2980 species:162425 "Emer...   106  2.6e-10   2
WB|WBGene00004447 - symbol:rpl-33 species:6239 "Caenorhab...   113  4.2e-10   2
POMBASE|SPCP31B10.08c - symbol:rpl35a "60S ribosomal prot...    98  8.6e-10   2
SGD|S000005760 - symbol:RPL33B "Ribosomal 60S subunit pro...    96  1.4e-09   2
UNIPROTKB|F1NQ35 - symbol:RPL35A "Uncharacterized protein...   102  2.8e-09   2
UNIPROTKB|Q56JY1 - symbol:RPL35A "60S ribosomal protein L...   102  2.8e-09   2
UNIPROTKB|E2QYD8 - symbol:RPL35A "Uncharacterized protein...   102  2.8e-09   2
UNIPROTKB|P18077 - symbol:RPL35A "60S ribosomal protein L...   102  2.8e-09   2
UNIPROTKB|F2Z5Q8 - symbol:RPL35A "Uncharacterized protein...   102  2.8e-09   2
RGD|2318932 - symbol:LOC100362049 "ribosomal protein L35a...   102  2.8e-09   2
RGD|2323316 - symbol:LOC100359825 "ribosomal protein L35a...   102  2.8e-09   2
RGD|2323736 - symbol:LOC100362957 "ribosomal protein L35a...   102  2.8e-09   2
RGD|628793 - symbol:Rpl35a "ribosomal protein L35a" speci...   102  2.8e-09   2
SGD|S000006064 - symbol:RPL33A "Ribosomal 60S subunit pro...    96  2.8e-09   2
RGD|1597244 - symbol:H60c "histocompatibility 60c" specie...    95  3.6e-09   2
RGD|2325092 - symbol:LOC100359636 "ribosomal protein L35a...    98  7.3e-09   2
RGD|2318348 - symbol:LOC100362338 "ribosomal protein L35a...    97  9.2e-09   2
UNIPROTKB|G4MRJ2 - symbol:MGG_09927 "60S ribosomal protei...    94  1.9e-08   2
TAIR|locus:2019627 - symbol:AT1G74270 species:3702 "Arabi...   128  2.0e-08   1
TAIR|locus:2007422 - symbol:AT1G07070 species:3702 "Arabi...   128  2.0e-08   1
UNIPROTKB|E1BMJ8 - symbol:LOC781576 "Uncharacterized prot...   102  3.8e-08   2
RGD|1560900 - symbol:RGD1560900 "similar to ribosomal pro...   103  4.8e-08   2
UNIPROTKB|F1M0T2 - symbol:F1M0T2 "Uncharacterized protein...    90  4.8e-08   2
TAIR|locus:2033548 - symbol:AT1G41880 species:3702 "Arabi...   123  6.8e-08   1
TAIR|locus:2078991 - symbol:AT3G55750 species:3702 "Arabi...   123  6.8e-08   1
UNIPROTKB|C9K025 - symbol:RPL35A "60S ribosomal protein L...    78  8.3e-07   2
POMBASE|SPBC1921.01c - symbol:rpl35b "60S ribosomal prote...   108  2.6e-06   1
UNIPROTKB|J9P9Q2 - symbol:J9P9Q2 "Uncharacterized protein...    87  2.7e-06   2
ZFIN|ZDB-GENE-040718-190 - symbol:rpl35a "ribosomal prote...   104  7.0e-06   1
RGD|6498396 - symbol:LOC100910496 "60S ribosomal protein ...   102  1.1e-05   1
UNIPROTKB|E1BHM9 - symbol:E1BHM9 "Uncharacterized protein...    94  8.1e-05   1
FB|FBgn0037328 - symbol:RpL35A "Ribosomal protein L35A" s...    86  0.00068   1


>GENEDB_PFALCIPARUM|PF11_0438 [details] [associations]
            symbol:PF11_0438 "Ribosomal protein, putative"
            species:5833 "Plasmodium falciparum" [GO:0015934 "large ribosomal
            subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
            RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
            MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
            GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
            OMA:YARDETD Uniprot:Q8IHT9
        Length = 140

 Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSGV+RAKFK+++PP  +    GDRVR++MYP NI
Sbjct:   108 HGNSGVIRAKFKTHIPPKAF----GDRVRILMYPSNI 140

 Score = 57 (25.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query:     1 SKSNQYPNTSLIHIEGVNTKE 21
             S+ NQ PN +LI I+ VNTK+
Sbjct:    52 SQRNQDPNFTLISIKNVNTKK 72


>UNIPROTKB|Q8IHT9 [details] [associations]
            symbol:PF11_0438 "60S ribosomal protein L35Ae, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0015934 "large
            ribosomal subunit" evidence=ISS] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 GO:GO:0006412 GO:GO:0003735 EMBL:AE014186
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0015934 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 ProtClustDB:PTZ00041
            RefSeq:XP_001348107.1 ProteinModelPortal:Q8IHT9 IntAct:Q8IHT9
            MINT:MINT-1637156 PRIDE:Q8IHT9 EnsemblProtists:PF11_0438:mRNA
            GeneID:810983 KEGG:pfa:PF11_0438 EuPathDB:PlasmoDB:PF3D7_1142600
            OMA:YARDETD Uniprot:Q8IHT9
        Length = 140

 Score = 124 (48.7 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 23/37 (62%), Positives = 30/37 (81%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSGV+RAKFK+++PP  +    GDRVR++MYP NI
Sbjct:   108 HGNSGVIRAKFKTHIPPKAF----GDRVRILMYPSNI 140

 Score = 57 (25.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 12/21 (57%), Positives = 16/21 (76%)

Query:     1 SKSNQYPNTSLIHIEGVNTKE 21
             S+ NQ PN +LI I+ VNTK+
Sbjct:    52 SQRNQDPNFTLISIKNVNTKK 72


>DICTYBASE|DDB_G0270424 [details] [associations]
            symbol:rpl35a "S60 ribosomal protein L35a"
            species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
            evidence=IEA;ISS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0003735 "structural constituent
            of ribosome" evidence=IEA;ISS] [GO:0030529 "ribonucleoprotein
            complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0000049 "tRNA binding" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR001780 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 dictyBase:DDB_G0270424
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 GO:GO:0000049 InterPro:IPR009000
            SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 PANTHER:PTHR10902
            OMA:FYVGKRC RefSeq:XP_646794.1 HSSP:Q8TZV6
            ProteinModelPortal:Q55BN7 STRING:Q55BN7 PRIDE:Q55BN7
            EnsemblProtists:DDB0231153 GeneID:8617767 KEGG:ddi:DDB_G0270424
            ProtClustDB:PTZ00041 Uniprot:Q55BN7
        Length = 105

 Score = 93 (37.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HG+SGVV+A+F  NLPP       G  VRV++YP NI
Sbjct:    73 HGSSGVVQARFARNLPPKAM----GAPVRVMLYPSNI 105

 Score = 67 (28.6 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 13/22 (59%), Positives = 18/22 (81%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEE 22
             S++ QYPN SLI IEGV ++E+
Sbjct:    16 SQATQYPNISLIKIEGVVSRED 37


>ASPGD|ASPL0000041158 [details] [associations]
            symbol:AN2980 species:162425 "Emericella nidulans"
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0002181 "cytoplasmic
            translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            EMBL:BN001306 GO:GO:0005840 EMBL:AACD01000051 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            OrthoDB:EOG4BP4NF RefSeq:XP_660584.1 ProteinModelPortal:Q5B900
            STRING:Q5B900 EnsemblFungi:CADANIAT00010100 GeneID:2874180
            KEGG:ani:AN2980.2 Uniprot:Q5B900
        Length = 109

 Score = 106 (42.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 22/38 (57%), Positives = 27/38 (71%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVRA+F+ NLP   +    G  VRV++YP NI
Sbjct:    76 PHGNSGVVRAQFRHNLPAKSF----GATVRVMLYPSNI 109

 Score = 52 (23.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query:     1 SKSNQYPNTSLIHIEGVNTKE 21
             SK    PNTSLI I+GV+  E
Sbjct:    21 SKRAVNPNTSLIKIDGVDNTE 41


>WB|WBGene00004447 [details] [associations]
            symbol:rpl-33 species:6239 "Caenorhabditis elegans"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0040010
            "positive regulation of growth rate" evidence=IMP] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0040017 "positive regulation of locomotion" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0002119 "nematode larval development"
            evidence=IMP] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 GO:GO:0009792 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0006412 GO:GO:0040017
            GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451 HOGENOM:HOG000195636
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972
            EMBL:FO081111 PIR:T34207 RefSeq:NP_495468.1
            ProteinModelPortal:P49180 SMR:P49180 STRING:P49180 PaxDb:P49180
            EnsemblMetazoa:F10E7.7.1 EnsemblMetazoa:F10E7.7.2 GeneID:174166
            KEGG:cel:CELE_F10E7.7 UCSC:F10E7.7.1 CTD:174166 WormBase:F10E7.7
            InParanoid:P49180 NextBio:882813 Uniprot:P49180
        Length = 124

 Score = 113 (44.8 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 22/38 (57%), Positives = 27/38 (71%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGN+G VRAKF  N+PPS      G R+RV++YP NI
Sbjct:    91 PHGNAGAVRAKFHHNIPPSAL----GKRIRVLLYPSNI 124

 Score = 43 (20.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
 Identities = 9/18 (50%), Positives = 13/18 (72%)

Query:     5 QYPNTSLIHIEGVNTKEE 22
             Q  +TSL+ +EGV  KE+
Sbjct:    34 QSEHTSLLKLEGVFNKED 51


>POMBASE|SPCP31B10.08c [details] [associations]
            symbol:rpl35a "60S ribosomal protein L35a"
            species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
            translation" evidence=NAS] [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0006412 "translation" evidence=ISO]
            [GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 PomBase:SPCP31B10.08c EMBL:CU329672
            GenomeReviews:CU329672_GR GO:GO:0003735 GO:GO:0002181
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:CAKFRSN
            OrthoDB:EOG4BP4NF EMBL:AB017603 PIR:T41698 RefSeq:NP_587864.1
            ProteinModelPortal:Q9USG6 STRING:Q9USG6 PRIDE:Q9USG6
            EnsemblFungi:SPCP31B10.08c.1 GeneID:2539518 KEGG:spo:SPCP31B10.08c
            NextBio:20800679 Uniprot:Q9USG6
        Length = 108

 Score = 98 (39.6 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
 Identities = 20/38 (52%), Positives = 25/38 (65%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSG VRA+F  NLP   +    G  +RV++YP NI
Sbjct:    75 PHGNSGAVRARFVHNLPAKTF----GSSLRVMLYPSNI 108

 Score = 55 (24.4 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
 Identities = 11/22 (50%), Positives = 16/22 (72%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEE 22
             SK   +P TS++ IEG ++KEE
Sbjct:    20 SKHVIHPGTSIVKIEGCDSKEE 41


>SGD|S000005760 [details] [associations]
            symbol:RPL33B "Ribosomal 60S subunit protein L33B"
            species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003735
            "structural constituent of ribosome" evidence=IEA;IDA] [GO:0002181
            "cytoplasmic translation" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            SGD:S000005760 EMBL:BK006948 GO:GO:0003735 GO:GO:0002181
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 RefSeq:NP_014877.3
            GeneID:854409 KEGG:sce:YOR234C KO:K02917 RefSeq:NP_014880.3
            GeneID:854412 KEGG:sce:YOR237W eggNOG:COG2451 HOGENOM:HOG000195636
            PANTHER:PTHR10902 OMA:FYVGKRC OrthoDB:EOG4BP4NF
            GeneTree:ENSGT00390000016972 EMBL:L23923 EMBL:Z75142 PIR:S44069
            ProteinModelPortal:P41056 SMR:P41056 IntAct:P41056 STRING:P41056
            PaxDb:P41056 PeptideAtlas:P41056 EnsemblFungi:YOR234C
            NextBio:976598 Genevestigator:P41056 GermOnline:YOR234C
            Uniprot:P41056
        Length = 107

 Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSGVVRA F++NLP   +    G  VR+ +YP NI
Sbjct:    75 HGNSGVVRATFRNNLPAKTF----GASVRIFLYPSNI 107

 Score = 55 (24.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
 Identities = 13/22 (59%), Positives = 14/22 (63%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEE 22
             SK    PN SLI IEGV T +E
Sbjct:    19 SKRVNNPNVSLIKIEGVATPQE 40


>UNIPROTKB|F1NQ35 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IEA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IEA] [GO:0042273 "ribosomal large
            subunit biogenesis" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 PANTHER:PTHR10902
            OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:AADN02020638
            IPI:IPI00576833 Ensembl:ENSGALT00000012307 Uniprot:F1NQ35
        Length = 113

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    81 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 113

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    23 NQREHTALLKIEGVYARQE 41


>UNIPROTKB|Q56JY1 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9913
            "Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0000049 "tRNA
            binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            [GO:0003735 "structural constituent of ribosome" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            GO:GO:0000049 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            GeneTree:ENSGT00390000016972 EMBL:AY911347 EMBL:BC111654
            IPI:IPI00697014 RefSeq:NP_001020492.1 UniGene:Bt.15384
            UniGene:Bt.65591 ProteinModelPortal:Q56JY1 STRING:Q56JY1
            PRIDE:Q56JY1 Ensembl:ENSBTAT00000018888 GeneID:506768
            KEGG:bta:506768 CTD:6165 HOVERGEN:HBG054581 InParanoid:Q56JY1
            OrthoDB:EOG4FR0T3 NextBio:20867746 ArrayExpress:Q56JY1
            Uniprot:Q56JY1
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>UNIPROTKB|E2QYD8 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            GO:GO:0006412 GO:GO:0003735 GO:GO:0042273 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
            EMBL:AAEX03017077 RefSeq:XP_535773.1 RefSeq:XP_858367.1
            ProteinModelPortal:E2QYD8 SMR:E2QYD8 PRIDE:E2QYD8
            Ensembl:ENSCAFT00000020171 GeneID:478597 KEGG:cfa:478597
            NextBio:20853914 Uniprot:E2QYD8
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>UNIPROTKB|P18077 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9606
            "Homo sapiens" [GO:0000049 "tRNA binding" evidence=IEA] [GO:0006364
            "rRNA processing" evidence=IMP] [GO:0042273 "ribosomal large
            subunit biogenesis" evidence=IMP] [GO:0006412 "translation"
            evidence=NAS;TAS] [GO:0003735 "structural constituent of ribosome"
            evidence=NAS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
            process, nonsense-mediated decay" evidence=TAS] [GO:0005829
            "cytosol" evidence=TAS] [GO:0006413 "translational initiation"
            evidence=TAS] [GO:0006414 "translational elongation" evidence=TAS]
            [GO:0006415 "translational termination" evidence=TAS] [GO:0006614
            "SRP-dependent cotranslational protein targeting to membrane"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
            metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
            process" evidence=TAS] [GO:0019058 "viral infectious cycle"
            evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
            [GO:0044267 "cellular protein metabolic process" evidence=TAS]
            Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413
            GO:GO:0003735 GO:GO:0042273 GO:GO:0000049 GO:GO:0006364
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0006415 GO:GO:0006414
            Reactome:REACT_1762 GO:GO:0006614 GO:GO:0022625 KO:K02917
            GO:GO:0019083 eggNOG:COG2451 HOGENOM:HOG000195636 PANTHER:PTHR10902
            OMA:FYVGKRC Orphanet:124 CTD:6165 HOVERGEN:HBG054581
            OrthoDB:EOG4FR0T3 EMBL:X52966 EMBL:AY871273 EMBL:CH471252
            EMBL:BC001037 EMBL:BC010949 EMBL:BC017093 EMBL:BC061890 EMBL:X94619
            IPI:IPI00029731 PIR:S12710 RefSeq:NP_000987.2 UniGene:Hs.529631
            ProteinModelPortal:P18077 SMR:P18077 IntAct:P18077
            MINT:MINT-1163509 STRING:P18077 PhosphoSite:P18077 DMDM:22002061
            SWISS-2DPAGE:P18077 PaxDb:P18077 PRIDE:P18077 DNASU:6165
            Ensembl:ENST00000448864 Ensembl:ENST00000464167 GeneID:6165
            KEGG:hsa:6165 UCSC:uc003fyr.3 GeneCards:GC03P197676
            H-InvDB:HIX0005661 H-InvDB:HIX0163429 H-InvDB:HIX0170318
            H-InvDB:HIX0170319 HGNC:HGNC:10345 MIM:180468 MIM:612528
            neXtProt:NX_P18077 PharmGKB:PA34728 InParanoid:P18077
            PhylomeDB:P18077 GenomeRNAi:6165 NextBio:23949 ArrayExpress:P18077
            Bgee:P18077 CleanEx:HS_RPL35A Genevestigator:P18077
            GermOnline:ENSG00000182899 Uniprot:P18077
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>UNIPROTKB|F2Z5Q8 [details] [associations]
            symbol:RPL35A "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0003735 GO:GO:0042273 GO:GO:0006364 InterPro:IPR009000
            SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 PANTHER:PTHR10902
            OMA:FYVGKRC GeneTree:ENSGT00390000016972 EMBL:CU694544
            EMBL:CU640404 RefSeq:XP_003357274.1 RefSeq:XP_003358821.1
            RefSeq:XP_003358822.1 SMR:F2Z5Q8 Ensembl:ENSSSCT00000012969
            Ensembl:ENSSSCT00000016266 GeneID:100514796 GeneID:100519675
            KEGG:ssc:100514796 KEGG:ssc:100519675 Uniprot:F2Z5Q8
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>RGD|2318932 [details] [associations]
            symbol:LOC100362049 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
            RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
            ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
            GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>RGD|2323316 [details] [associations]
            symbol:LOC100359825 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318932 RGD:2323316 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 OMA:ISYQRSK PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00476633
            RefSeq:XP_002726801.1 RefSeq:XP_002729684.1
            ProteinModelPortal:D4A771 PRIDE:D4A771 Ensembl:ENSRNOT00000043587
            GeneID:100362049 KEGG:rno:100362049 UCSC:RGD:2318932 Uniprot:D4A771
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>RGD|2323736 [details] [associations]
            symbol:LOC100362957 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2323736 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 OMA:GERCAYV
            IPI:IPI00207615 RefSeq:XP_002729247.1 RefSeq:XP_003753801.1
            ProteinModelPortal:D3ZYY1 PRIDE:D3ZYY1 Ensembl:ENSRNOT00000043508
            GeneID:100362957 KEGG:rno:100362957 UCSC:RGD:2323736 Uniprot:D3ZYY1
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTTLLKIEGVYARDE 38


>RGD|628793 [details] [associations]
            symbol:Rpl35a "ribosomal protein L35a" species:10116 "Rattus
            norvegicus" [GO:0000049 "tRNA binding" evidence=TAS] [GO:0003735
            "structural constituent of ribosome" evidence=TAS] [GO:0005739
            "mitochondrion" evidence=ISO] [GO:0005840 "ribosome" evidence=TAS]
            [GO:0006364 "rRNA processing" evidence=ISO] [GO:0006412
            "translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISO] [GO:0042273 "ribosomal large subunit
            biogenesis" evidence=ISO] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:628793
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 GO:GO:0000049
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 PANTHER:PTHR10902 OMA:FYVGKRC
            GeneTree:ENSGT00390000016972 CTD:6165 HOVERGEN:HBG054581
            OrthoDB:EOG4FR0T3 EMBL:X03475 EMBL:BC061557 IPI:IPI00197720
            PIR:A25404 RefSeq:NP_067087.1 RefSeq:XP_002725811.1
            RefSeq:XP_002726700.1 RefSeq:XP_002727940.1 RefSeq:XP_002727941.1
            RefSeq:XP_002727942.1 RefSeq:XP_002728899.1 RefSeq:XP_002729606.1
            RefSeq:XP_003751166.1 RefSeq:XP_003752544.1 RefSeq:XP_003752545.1
            RefSeq:XP_003752546.1 UniGene:Rn.156479 UniGene:Rn.2812
            ProteinModelPortal:P04646 SMR:P04646 STRING:P04646 PRIDE:P04646
            Ensembl:ENSRNOT00000040261 Ensembl:ENSRNOT00000042285
            Ensembl:ENSRNOT00000050438 Ensembl:ENSRNOT00000059047
            GeneID:100359498 GeneID:100359825 GeneID:100361473 GeneID:100910496
            GeneID:57809 KEGG:rno:100359498 KEGG:rno:100359825
            KEGG:rno:100361473 KEGG:rno:100910496 KEGG:rno:57809
            UCSC:RGD:628793 InParanoid:P04646 NextBio:611330
            Genevestigator:P04646 GermOnline:ENSRNOG00000029454
            GermOnline:ENSRNOG00000031641 GermOnline:ENSRNOG00000032303
            GermOnline:ENSRNOG00000038678 Uniprot:P04646
        Length = 110

 Score = 102 (41.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>SGD|S000006064 [details] [associations]
            symbol:RPL33A "Ribosomal 60S subunit protein L33A"
            species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0002181 "cytoplasmic translation"
            evidence=IDA] [GO:0003735 "structural constituent of ribosome"
            evidence=IEA;IDA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 SGD:S000006064 EMBL:BK006949 GO:GO:0003735
            GO:GO:0002181 PDB:4B6A PDBsum:4B6A InterPro:IPR009000
            SUPFAM:SSF50447 EMBL:U43703 GO:GO:0022625 KO:K02917
            HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902 PDB:3IZS
            PDB:3U5E PDB:3U5I PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I
            OrthoDB:EOG4BP4NF EMBL:X57969 EMBL:Z73499 PIR:S18431
            RefSeq:NP_015182.1 ProteinModelPortal:P05744 SMR:P05744
            IntAct:P05744 STRING:P05744 PeptideAtlas:P05744
            EnsemblFungi:YPL143W GeneID:855960 KEGG:sce:YPL143W
            GeneTree:ENSGT00390000016972 NextBio:980759 Genevestigator:P05744
            GermOnline:YPL143W Uniprot:P05744
        Length = 107

 Score = 96 (38.9 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSGVVRA F++NLP   +    G  VR+ +YP NI
Sbjct:    75 HGNSGVVRATFRNNLPAKTF----GASVRIFLYPSNI 107

 Score = 52 (23.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
 Identities = 12/22 (54%), Positives = 14/22 (63%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEE 22
             SK    PN SLI IEGV T ++
Sbjct:    19 SKRVNNPNVSLIKIEGVATPQD 40


>RGD|1597244 [details] [associations]
            symbol:H60c "histocompatibility 60c" species:10116 "Rattus
            norvegicus" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 RGD:1597244
            GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 PANTHER:PTHR10902 IPI:IPI00765073
            Ensembl:ENSRNOT00000036970 Uniprot:D3ZFY4
        Length = 114

 Score = 95 (38.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 20/37 (54%), Positives = 25/37 (67%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSGVVRAKF+S LP     + H  R+R ++YP  I
Sbjct:    82 HGNSGVVRAKFRSKLPAKA--IGH--RIRAMLYPSRI 114

 Score = 52 (23.4 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 10/19 (52%), Positives = 15/19 (78%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV T++E
Sbjct:    24 NQREHTALLEIEGVYTRDE 42


>RGD|2325092 [details] [associations]
            symbol:LOC100359636 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 RGD:2325092 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 OMA:HRIRVVI OrthoDB:EOG4FR0T3 IPI:IPI00392735
            RefSeq:XP_002728707.1 RefSeq:XP_003753232.1
            ProteinModelPortal:D3ZRV7 Ensembl:ENSRNOT00000045599
            GeneID:100359636 KEGG:rno:100359636 UCSC:RGD:2325092 Uniprot:D3ZRV7
        Length = 110

 Score = 98 (39.6 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
 Identities = 22/42 (52%), Positives = 27/42 (64%)

Query:    20 KEEVPHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             KE   HGNSG+VRAKF+SNLP        G R+ V++YP  I
Sbjct:    73 KETRAHGNSGMVRAKFQSNLPAKAT----GHRICVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>RGD|2318348 [details] [associations]
            symbol:LOC100362338 "ribosomal protein L35a-like" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            RGD:2318348 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902 OMA:CAKFRSN
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00400634
            RefSeq:XP_002728500.1 RefSeq:XP_003752996.1
            ProteinModelPortal:D3ZZN4 Ensembl:ENSRNOT00000043796
            GeneID:100362338 KEGG:rno:100362338 Uniprot:D3ZZN4
        Length = 110

 Score = 97 (39.2 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+ NLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRRNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 46 (21.3 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>UNIPROTKB|G4MRJ2 [details] [associations]
            symbol:MGG_09927 "60S ribosomal protein L33-B"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
            development" evidence=IEP] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 EMBL:CM001231 GO:GO:0043581
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 PANTHER:PTHR10902
            RefSeq:XP_003710027.1 ProteinModelPortal:G4MRJ2
            EnsemblFungi:MGG_09927T0 GeneID:2680897 KEGG:mgr:MGG_09927
            Uniprot:G4MRJ2
        Length = 109

 Score = 94 (38.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
 Identities = 20/38 (52%), Positives = 26/38 (68%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVRAKF + LP   +    G  VR+++YP +I
Sbjct:    76 PHGNSGVVRAKFTTPLPTRSF----GASVRIMLYPSSI 109

 Score = 46 (21.3 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query:     1 SKSNQYPNTSLIHIEGVN 18
             S+    P TSLI IEGV+
Sbjct:    21 SRHTNRPETSLIKIEGVD 38


>TAIR|locus:2019627 [details] [associations]
            symbol:AT1G74270 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 EnsemblPlants:AT1G74270.1 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC020579 GO:GO:0022625
            KO:K02917 HOGENOM:HOG000195636 ProtClustDB:CLSN2682223
            PANTHER:PTHR10902 EMBL:AF370320 EMBL:AY063108 EMBL:AY085956
            IPI:IPI00520606 PIR:B96771 RefSeq:NP_177567.1 UniGene:At.18151
            ProteinModelPortal:Q9C912 SMR:Q9C912 STRING:Q9C912 GeneID:843767
            KEGG:ath:AT1G74270 KEGG:dosa:Os05t0555800-00 GeneFarm:166
            TAIR:At1g74270 InParanoid:Q9C912 OMA:FYVGKRC PhylomeDB:Q9C912
            Genevestigator:Q9C912 GermOnline:AT1G74270 Uniprot:Q9C912
        Length = 112

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 27/38 (71%), Positives = 28/38 (73%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVRAKF SNLPP     + G RVRV MYP NI
Sbjct:    79 PHGNSGVVRAKFTSNLPPK----SMGSRVRVFMYPSNI 112

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEEVP--HGN--SGVVRAKFKSN 38
             SKSNQYPNTSL+ IEGVNT+EEV    G   + + +AK K N
Sbjct:    24 SKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKN 65


>TAIR|locus:2007422 [details] [associations]
            symbol:AT1G07070 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 EnsemblPlants:AT1G07070.1 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AC067971 GO:GO:0022625
            KO:K02917 EMBL:AK119060 EMBL:BT004714 EMBL:AY086795 IPI:IPI00526309
            PIR:E86205 RefSeq:NP_172188.1 UniGene:At.42314
            ProteinModelPortal:Q9LMK0 SMR:Q9LMK0 STRING:Q9LMK0 PaxDb:Q9LMK0
            PRIDE:Q9LMK0 GeneID:837218 KEGG:ath:AT1G07070 GeneFarm:219
            TAIR:At1g07070 eggNOG:COG2451 HOGENOM:HOG000195636
            InParanoid:Q9LMK0 OMA:ISYQRSK PhylomeDB:Q9LMK0
            ProtClustDB:CLSN2682223 Genevestigator:Q9LMK0 GermOnline:AT1G07070
            PANTHER:PTHR10902 Uniprot:Q9LMK0
        Length = 112

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 27/38 (71%), Positives = 28/38 (73%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVRAKF SNLPP     + G RVRV MYP NI
Sbjct:    79 PHGNSGVVRAKFTSNLPPK----SMGSRVRVFMYPSNI 112

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 24/42 (57%), Positives = 29/42 (69%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEEVP--HGN--SGVVRAKFKSN 38
             SKSNQYPNTSL+ +EGVNT EEV    G   + + +AK K N
Sbjct:    24 SKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKN 65


>UNIPROTKB|E1BMJ8 [details] [associations]
            symbol:LOC781576 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 GeneTree:ENSGT00390000016972 EMBL:DAAA02008240
            IPI:IPI00826854 RefSeq:XP_003582043.1 RefSeq:XP_003582044.1
            RefSeq:XP_003585932.1 RefSeq:XP_003585933.1
            ProteinModelPortal:E1BMJ8 Ensembl:ENSBTAT00000043998 GeneID:781576
            KEGG:bta:781576 OMA:GERCAYV Uniprot:E1BMJ8
        Length = 110

 Score = 102 (41.0 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGH--RIRVMLYPSRI 110

 Score = 35 (17.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:     4 NQYPNTSLIHIEGV 17
             NQ  +T+ + IEGV
Sbjct:    20 NQREHTAFLKIEGV 33


>RGD|1560900 [details] [associations]
            symbol:RGD1560900 "similar to ribosomal protein L35a"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 RGD:1560900 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 OrthoDB:EOG4FR0T3 IPI:IPI00190408
            RefSeq:XP_003750919.1 RefSeq:XP_003752397.1 PRIDE:D4A329
            Ensembl:ENSRNOT00000049614 GeneID:100911973 KEGG:rno:100911973
            OMA:STEAANF Uniprot:D4A329
        Length = 110

 Score = 103 (41.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + HG  +RV++YP  I
Sbjct:    78 HGNSGMVRAKFRSNLPAKA--IGHG--IRVMLYPSRI 110

 Score = 33 (16.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  + + + IEGV  ++E
Sbjct:    20 NQREHMAPLKIEGVYARDE 38


>UNIPROTKB|F1M0T2 [details] [associations]
            symbol:F1M0T2 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0006412 "translation" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 IPI:IPI00198382
            Ensembl:ENSRNOT00000041291 OMA:GHRILVM Uniprot:F1M0T2
        Length = 107

 Score = 90 (36.7 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
 Identities = 19/37 (51%), Positives = 26/37 (70%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+S+LP     + H  R+ V++YP  I
Sbjct:    75 HGNSGMVRAKFRSSLPAKA--IGH--RILVMLYPSRI 107

 Score = 46 (21.3 bits), Expect = 4.8e-08, Sum P(2) = 4.8e-08
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    17 NQREHTALLKIEGVYARDE 35


>TAIR|locus:2033548 [details] [associations]
            symbol:AT1G41880 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0022625
            "cytosolic large ribosomal subunit" evidence=IDA] [GO:0005829
            "cytosol" evidence=RCA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            EnsemblPlants:AT1G41880.1 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0016020 GO:GO:0006412 GO:GO:0003735 InterPro:IPR009000
            SUPFAM:SSF50447 GO:GO:0022625 KO:K02917 eggNOG:COG2451
            HOGENOM:HOG000195636 ProtClustDB:CLSN2682223 PANTHER:PTHR10902
            EMBL:AC008046 EMBL:AF370549 EMBL:BT006517 EMBL:AY084500
            IPI:IPI00523743 PIR:D96492 RefSeq:NP_174951.1 UniGene:At.24952
            UniGene:At.48273 ProteinModelPortal:Q9FZH0 SMR:Q9FZH0 STRING:Q9FZH0
            PaxDb:Q9FZH0 PRIDE:Q9FZH0 GeneID:840799 KEGG:ath:AT1G41880
            GeneFarm:159 TAIR:At1g41880 InParanoid:Q9FZH0 OMA:CAKFRSN
            PhylomeDB:Q9FZH0 Genevestigator:Q9FZH0 GermOnline:AT1G41880
            Uniprot:Q9FZH0
        Length = 111

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 26/38 (68%), Positives = 28/38 (73%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVR+KF SNLPP     + G RVRV MYP NI
Sbjct:    78 PHGNSGVVRSKFTSNLPPK----SMGARVRVFMYPSNI 111

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 26/42 (61%), Positives = 30/42 (71%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEEVP--HGN--SGVVRAKFKSN 38
             SKSNQYPNTSLI IEGVNT+EEV    G   + + +AK K N
Sbjct:    23 SKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKN 64


>TAIR|locus:2078991 [details] [associations]
            symbol:AT3G55750 species:3702 "Arabidopsis thaliana"
            [GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
            "translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
            evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
            [GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
            ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
            evidence=RCA] InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247
            ProDom:PD012670 PROSITE:PS01105 EnsemblPlants:AT3G55750.1
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 EMBL:AL161667
            GO:GO:0022625 KO:K02917 HOGENOM:HOG000195636
            ProtClustDB:CLSN2682223 PANTHER:PTHR10902 UniGene:At.24952
            UniGene:At.48273 EMBL:AF446895 EMBL:AY052680 EMBL:AY087646
            EMBL:Z18517 IPI:IPI00542655 PIR:T47714 RefSeq:NP_191134.1
            ProteinModelPortal:P51422 SMR:P51422 STRING:P51422 GeneID:824741
            KEGG:ath:AT3G55750 GeneFarm:162 TAIR:At3g55750 InParanoid:P51422
            OMA:HRIRVVI PhylomeDB:P51422 Genevestigator:P51422
            GermOnline:AT3G55750 Uniprot:P51422
        Length = 111

 Score = 123 (48.4 bits), Expect = 6.8e-08, P = 6.8e-08
 Identities = 26/38 (68%), Positives = 28/38 (73%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVR+KF SNLPP     + G RVRV MYP NI
Sbjct:    78 PHGNSGVVRSKFTSNLPPK----SMGARVRVFMYPSNI 111

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)

Query:     1 SKSNQYPNTSLIHIEGVNTKEEVP--HGN--SGVVRAKFKSN 38
             SKSNQYPNTSL+ IEGVNT+EEV    G   + + +AK K N
Sbjct:    23 SKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKN 64


>UNIPROTKB|C9K025 [details] [associations]
            symbol:RPL35A "60S ribosomal protein L35a" species:9606
            "Homo sapiens" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            EMBL:AC135893 PANTHER:PTHR10902 HGNC:HGNC:10345 IPI:IPI00793102
            ProteinModelPortal:C9K025 SMR:C9K025 STRING:C9K025 PRIDE:C9K025
            Ensembl:ENST00000442341 ArrayExpress:C9K025 Bgee:C9K025
            Uniprot:C9K025
        Length = 94

 Score = 78 (32.5 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
 Identities = 14/16 (87%), Positives = 16/16 (100%)

Query:    25 HGNSGVVRAKFKSNLP 40
             HGNSG+VRAKF+SNLP
Sbjct:    78 HGNSGMVRAKFRSNLP 93

 Score = 46 (21.3 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+L+ IEGV  ++E
Sbjct:    20 NQREHTALLKIEGVYARDE 38


>POMBASE|SPBC1921.01c [details] [associations]
            symbol:rpl35b "60S ribosomal protein L35a (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
            translation" evidence=NAS] [GO:0003735 "structural constituent of
            ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
            evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0019843 "rRNA binding" evidence=ISS] [GO:0022625 "cytosolic
            large ribosomal subunit" evidence=ISO] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            PomBase:SPBC1921.01c GO:GO:0005730 EMBL:CU329671 GO:GO:0008270
            GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0019843
            InterPro:IPR009000 SUPFAM:SSF50447 GO:GO:0022625 KO:K02917
            eggNOG:COG2451 HOGENOM:HOG000195636 OMA:ISYQRSK PANTHER:PTHR10902
            PIR:T39785 RefSeq:NP_001018813.2 ProteinModelPortal:Q9USX4
            STRING:Q9USX4 PRIDE:Q9USX4 EnsemblFungi:SPBC1921.01c.1
            GeneID:3361295 KEGG:spo:SPBC1921.01c OrthoDB:EOG4BP4NF
            NextBio:20811381 Uniprot:Q9USX4
        Length = 108

 Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 21/38 (55%), Positives = 27/38 (71%)

Query:    24 PHGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             PHGNSGVVRA+F  NLPP  +    G  +RV++YP N+
Sbjct:    75 PHGNSGVVRARFTHNLPPKTF----GASLRVMLYPSNV 108


>UNIPROTKB|J9P9Q2 [details] [associations]
            symbol:J9P9Q2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006412 "translation" evidence=IEA]
            [GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] InterPro:IPR001780
            Pfam:PF01247 ProDom:PD012670 GO:GO:0006412 GO:GO:0005840
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            GeneTree:ENSGT00390000016972 EMBL:AAEX03004458
            Ensembl:ENSCAFT00000015491 Uniprot:J9P9Q2
        Length = 110

 Score = 87 (35.7 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 18/37 (48%), Positives = 25/37 (67%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HG+SG+V  KF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGSSGMVHTKFRSNLPGKA--IGH--RIRVMLYPSRI 110

 Score = 32 (16.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
 Identities = 7/19 (36%), Positives = 12/19 (63%)

Query:     4 NQYPNTSLIHIEGVNTKEE 22
             NQ  +T+ + I+GV   +E
Sbjct:    20 NQREHTAPLKIKGVYAPDE 38


>ZFIN|ZDB-GENE-040718-190 [details] [associations]
            symbol:rpl35a "ribosomal protein L35a" species:7955
            "Danio rerio" [GO:0003735 "structural constituent of ribosome"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006412
            "translation" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
            [GO:0009790 "embryo development" evidence=IMP] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            ZFIN:ZDB-GENE-040718-190 GO:GO:0006412 GO:GO:0005840 GO:GO:0009790
            GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917
            HOGENOM:HOG000195636 PANTHER:PTHR10902 GeneTree:ENSGT00390000016972
            CTD:6165 HOVERGEN:HBG054581 EMBL:FP017147 EMBL:CU896647
            EMBL:BC076321 IPI:IPI00508277 RefSeq:NP_001002487.1 UniGene:Dr.1432
            Ensembl:ENSDART00000121770 Ensembl:ENSDART00000147185 GeneID:436760
            KEGG:dre:436760 InParanoid:Q6DGM0 NextBio:20831197 Uniprot:Q6DGM0
        Length = 110

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKFKSNLP     + H  R+RV++YP  +
Sbjct:    78 HGNSGMVRAKFKSNLPAKA--IGH--RIRVMLYPSRV 110


>RGD|6498396 [details] [associations]
            symbol:LOC100910496 "60S ribosomal protein L35a-like"
            species:10116 "Rattus norvegicus" [GO:0003735 "structural
            constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
            evidence=IEA] [GO:0006412 "translation" evidence=IEA]
            InterPro:IPR001780 InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670
            PROSITE:PS01105 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 PANTHER:PTHR10902
            IPI:IPI00559832 Ensembl:ENSRNOT00000050968 Uniprot:F1M2L1
        Length = 105

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 21/37 (56%), Positives = 27/37 (72%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+VRAKF+SNLP     + H  R+RV++YP  I
Sbjct:    73 HGNSGMVRAKFRSNLPEKA--IGH--RIRVMLYPSRI 105


>UNIPROTKB|E1BHM9 [details] [associations]
            symbol:E1BHM9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
            "ribosome" evidence=IEA] [GO:0003735 "structural constituent of
            ribosome" evidence=IEA] InterPro:IPR001780 InterPro:IPR018266
            Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105 GO:GO:0006412
            GO:GO:0005840 GO:GO:0003735 InterPro:IPR009000 SUPFAM:SSF50447
            PANTHER:PTHR10902 OMA:CAKFRSN GeneTree:ENSGT00390000016972
            EMBL:DAAA02036428 IPI:IPI00906373 Ensembl:ENSBTAT00000015544
            Uniprot:E1BHM9
        Length = 110

 Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
 Identities = 20/37 (54%), Positives = 26/37 (70%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGNSG+V AKF+SNLP     + H  R+RV++YP  I
Sbjct:    78 HGNSGMVCAKFRSNLPAKA--IGH--RIRVMLYPSRI 110


>FB|FBgn0037328 [details] [associations]
            symbol:RpL35A "Ribosomal protein L35A" species:7227
            "Drosophila melanogaster" [GO:0022625 "cytosolic large ribosomal
            subunit" evidence=ISS] [GO:0006412 "translation" evidence=ISS]
            [GO:0003735 "structural constituent of ribosome" evidence=ISS;IDA]
            [GO:0005840 "ribosome" evidence=IDA] InterPro:IPR001780
            InterPro:IPR018266 Pfam:PF01247 ProDom:PD012670 PROSITE:PS01105
            EMBL:AE014297 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
            InterPro:IPR009000 SUPFAM:SSF50447 KO:K02917 eggNOG:COG2451
            PANTHER:PTHR10902 OMA:FYVGKRC GeneTree:ENSGT00390000016972 CTD:6165
            EMBL:AY071136 EMBL:AY071732 RefSeq:NP_649539.1 UniGene:Dm.1069
            SMR:Q9VNB9 MINT:MINT-944394 STRING:Q9VNB9
            EnsemblMetazoa:FBtr0078769 GeneID:40654 KEGG:dme:Dmel_CG2099
            UCSC:CG2099-RA FlyBase:FBgn0037328 InParanoid:Q9VNB9
            OrthoDB:EOG42RBQR ChiTaRS:RPL35A GenomeRNAi:40654 NextBio:819867
            Uniprot:Q9VNB9
        Length = 157

 Score = 86 (35.3 bits), Expect = 0.00068, P = 0.00068
 Identities = 17/37 (45%), Positives = 23/37 (62%)

Query:    25 HGNSGVVRAKFKSNLPPSPWYLNHGDRVRVVMYPGNI 61
             HGN+G VRA+F  NLP        G R+R+++YP  I
Sbjct:   125 HGNTGAVRARFNRNLPGHAM----GHRIRIMLYPSRI 157


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.312   0.133   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       61        61   0.00091  102 3  11 23  0.47    28
                                                     29  0.39    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  35
  No. of states in DFA:  481 (51 KB)
  Total size of DFA:  89 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.39u 0.15s 7.54t   Elapsed:  00:00:00
  Total cpu time:  7.39u 0.15s 7.54t   Elapsed:  00:00:00
  Start:  Fri May 10 06:12:50 2013   End:  Fri May 10 06:12:50 2013

the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 Ribosomal protein, putative	gene from Plasmodium falciparum	1.1e-12
BLAST match view associations BLAST with PF11_0438 PF11_0438 PF11_0438 60S ribosomal protein L35Ae, putative	protein from Plasmodium falciparum 3D7	1.1e-12
BLAST match view associations BLAST with rpl35a rpl35a rpl35a S60 ribosomal protein L35a	gene from Dictyostelium discoideum	1.6e-10
BLAST match view associations BLAST with rpl-33 rpl-33 rpl-33	gene from Caenorhabditis elegans	4.2e-10
BLAST match view associations BLAST with RPL33B RPL33B RPL33B Ribosomal 60S subunit protein L33B	gene from Saccharomyces cerevisiae	1.4e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Gallus gallus	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Bos taurus	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	2.8e-09
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Sus scrofa	2.8e-09
BLAST match view associations BLAST with LOC100362049 LOC100362049 LOC100362049 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with LOC100359825 LOC100359825 LOC100359825 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with LOC100362957 LOC100362957 LOC100362957 ribosomal protein L35a-like	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with Rpl35a Rpl35a Rpl35a ribosomal protein L35a	gene from Rattus norvegicus	2.8e-09
BLAST match view associations BLAST with RPL33A RPL33A RPL33A Ribosomal 60S subunit protein L33A	gene from Saccharomyces cerevisiae	2.8e-09
BLAST match view associations BLAST with LOC100362338 LOC100362338 LOC100362338 ribosomal protein L35a-like	gene from Rattus norvegicus	9.2e-09
BLAST match view associations BLAST with MGG_09927 MGG_09927 MGG_09927 60S ribosomal protein L33-B	protein from Magnaporthe oryzae 70-15	1.9e-08
BLAST match view associations BLAST with AT1G74270 AT1G74270 AT1G74270	protein from Arabidopsis thaliana	2.0e-08
BLAST match view associations BLAST with AT1G07070 AT1G07070 AT1G07070	protein from Arabidopsis thaliana	2.0e-08
BLAST match view associations BLAST with LOC781576 LOC781576 LOC781576 Uncharacterized protein	protein from Bos taurus	3.8e-08
BLAST match view associations BLAST with RGD1560900 RGD1560900 RGD1560900 similar to ribosomal protein L35a	gene from Rattus norvegicus	4.8e-08
BLAST match view associations BLAST with F1M0T2 F1M0T2 F1M0T2 Uncharacterized protein	protein from Rattus norvegicus	4.8e-08
BLAST match view associations BLAST with AT1G41880 AT1G41880 AT1G41880	protein from Arabidopsis thaliana	6.8e-08
BLAST match view associations BLAST with AT3G55750 AT3G55750 AT3G55750	protein from Arabidopsis thaliana	6.8e-08
BLAST match view associations BLAST with RPL35A RPL35A RPL35A 60S ribosomal protein L35a	protein from Homo sapiens	8.3e-07
BLAST match view associations BLAST with RPL35A RPL35A RPL35A Uncharacterized protein	protein from Canis lupus familiaris	2.7e-06
BLAST match view associations BLAST with rpl35a rpl35a rpl35a ribosomal protein L35a	gene_product from Danio rerio	7.0e-06
BLAST match view associations BLAST with E1BHM9 E1BHM9 E1BHM9 Uncharacterized protein	protein from Bos taurus	8.1e-05
BLAST match view associations BLAST with RpL35A RpL35A RpL35A Ribosomal protein L35A	protein from Drosophila melanogaster	0.00068