BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044696
(220 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9C991|3HID2_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial
OS=Arabidopsis thaliana GN=At1g71170 PE=2 SV=1
Length = 299
Score = 263 bits (671), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 133/218 (61%), Positives = 160/218 (73%), Gaps = 8/218 (3%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L DG++S L PG V VD TSS P LAREI+ AR RDCWAVDAPVSGGD GAR+GKL I
Sbjct: 88 LGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTI 147
Query: 62 FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
FA GDS +V+WL P+ + +G FMGGAG GQSCKI NQI VG+N++GL+EG+VFA++AG
Sbjct: 148 FAGGDSEIVEWLAPVMKTMGIVRFMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAG 207
Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
LD KW +AVK GAAGS M L+GE M +D++ GFAEYMVKD+G E
Sbjct: 208 LDPVKWLEAVKDGAAGSAVMRLFGEMMAVRDYKATGFAEYMVKDLG--------MAAEAA 259
Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
+ +PG AL KQLF+ MVANGDGK G QG+V VI R+NG
Sbjct: 260 MAMPGTALNKQLFTVMVANGDGKLGFQGVVDVIRRLNG 297
>sp|Q949M8|3HID3_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial
OS=Arabidopsis thaliana GN=At1g71180 PE=2 SV=1
Length = 318
Score = 254 bits (648), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 129/218 (59%), Positives = 158/218 (72%), Gaps = 10/218 (4%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L DG++S L PG V VD TSS P LAREI AR R+CWAVDAPVSGGD GAR+G L I
Sbjct: 109 LGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGI 168
Query: 62 FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
FA GDS +V+WL+P+ + +G T+MG AG GQSCKI NQI +NL+GL+EG+VFA++AG
Sbjct: 169 FAGGDSEIVEWLSPVMKNIGTVTYMGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAG 228
Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
LD KW +AVK GAAGS M L+GE ++++D+R GFAEYMVKD+GM +
Sbjct: 229 LDTVKWLEAVKDGAAGSAVMRLFGEMIVKRDYRATGFAEYMVKDLGMAAEAAMPG----- 283
Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
AAL KQLF+ MVANGDGK G QG+VSVI R+NG
Sbjct: 284 -----AALSKQLFTGMVANGDGKLGIQGVVSVIRRLNG 316
>sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial
OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1
Length = 334
Score = 217 bits (553), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/219 (48%), Positives = 159/219 (72%), Gaps = 7/219 (3%)
Query: 2 LDP-DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
LDP G +S L G V VD T+S P+LA EI K A ++C+++DAPVSGGD+GA++GKL+
Sbjct: 112 LDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLS 171
Query: 61 IFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
IFA GD V+ L PLF ++GK FMG +G GQ K+ANQI + + +LGL EGL++A +A
Sbjct: 172 IFAGGDETTVKRLDPLFSLMGKVNFMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKA 231
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
GLDV+K+ +A+ GAAGS +++LYG+R++++DF PG + + VKD+G+ ++ E +R
Sbjct: 232 GLDVKKFLEAISTGAAGSKSIDLYGDRILKRDFDPGFYVNHFVKDLGICLN-----ECQR 286
Query: 181 V-VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
+ + LPG AL +QL+ ++ A+G+G GTQ L+ +ER+N
Sbjct: 287 MGLALPGLALAQQLYLSLKAHGEGDLGTQALLLALERLN 325
>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase YkwC OS=Bacillus subtilis (strain
168) GN=ykwC PE=3 SV=1
Length = 288
Score = 150 bits (378), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 128/210 (60%), Gaps = 5/210 (2%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ GA +D T+S P+LA++I + A+E+ +A+DAPVSGGDIGA++G LAI
Sbjct: 80 NGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVG 139
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G+ + P+F ++G+ + G AG GQ K+ NQI + A ++G++E + +A ++GL+
Sbjct: 140 GEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLE 199
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVV 183
++ GAAGS ++ RM++ +F PG + ++ +KDMG+ ++ E +E
Sbjct: 200 PENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEE---- 255
Query: 184 LPGAALGKQLFSAMVANGDGKFGTQGLVSV 213
+PG +L K L+ + A G+ GTQ + +
Sbjct: 256 MPGLSLAKSLYDKLAAQGEENSGTQSIYKL 285
>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=glxR PE=2 SV=1
Length = 292
Score = 147 bits (370), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 5/212 (2%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+G A G VD +S P + + E +DAPVSGG+IGAR+G L+I
Sbjct: 77 NGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVG 136
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
GD AV + + PLFE+LGK T +GG G GQ+CK+ANQI+V N+ +SE L+FA +AG D
Sbjct: 137 GDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGAD 196
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVV 183
+ R A+ GG A S +E++GERMI++ F PG KD+ + + +S +
Sbjct: 197 PVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLAL----QSAKALALN 252
Query: 184 LPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
LP A ++LF+ ANG + LV +E
Sbjct: 253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284
>sp|Q0QLF5|HMGD_EUBBA 2-(hydroxymethyl)glutarate dehydrogenase OS=Eubacterium barkeri
GN=Hgd PE=1 SV=1
Length = 301
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
P G++SA G V VD +S P+ ++ KVA E+ VDAPVSGG GA G L I
Sbjct: 81 PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMV 140
Query: 64 AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
AV + + P+ V+GK + +G G G + KI N +++G N+ L+E LV + GL
Sbjct: 141 GASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGL 200
Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA-EYMVKDMGMGVDVVEESEDERV 181
++ + + S AME E+ I GGFA + KD+G+ + E+ E
Sbjct: 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLAL----EAGKEGN 256
Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
V LP A+ Q+F A G G+ ++ V E++ G
Sbjct: 257 VPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294
>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2
Length = 291
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 5/216 (2%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L GIV ++ GA+ VD T++ +AREI + +DAPVSGG GA +G L +
Sbjct: 77 LGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAGAENGALTV 136
Query: 62 FAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
GD A + P+ + +G G GQ K+ NQI + + GL+EGL FA A
Sbjct: 137 MMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKSA 196
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
GLD K + + GAA S ME + M + + G ++M KD+G+ +D +
Sbjct: 197 GLDGLKVIEVISKGAAQSWQMENRYKTMWQGQYDFGFAIDWMRKDLGIALDEARRNGSH- 255
Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIER 216
LP AAL Q +S + A ++ T L++ +E+
Sbjct: 256 ---LPVAALVDQFYSEVQAMKGNRWDTSSLLARLEK 288
>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain
K12) GN=garR PE=1 SV=1
Length = 294
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
AL +GI+ PG V +D +S P +REI + + + +DAPVSGG+ A DG L+
Sbjct: 74 ALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLS 133
Query: 61 IFAAGDSAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
+ GD A+ L + + G G G G K+ANQ++V N+ +SE L A +
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193
Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
AG++ A++GG AGS ++ +++++F+PG + +KD+ +D +
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253
Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
LP A ++ A+ A+G G L E++
Sbjct: 254 ----LPLTAAVMEMMQALRADGLGTADHSALACYYEKL 287
>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1
Length = 294
Score = 103 bits (258), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 5/218 (2%)
Query: 1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
AL +GI+ PG V +D +S P +REI + + + +DAPVSGG+ A DG L+
Sbjct: 74 ALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLS 133
Query: 61 IFAAGDSAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
+ GD A+ L + + G G G G K+ANQ++V N+ +SE L A +
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193
Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
AG++ A++GG AGS ++ +++++F+PG + +KD+ +D +
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253
Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
LP A ++ A+ A+G G L E++
Sbjct: 254 ----LPLTAAVMEMMQALRADGLGTADHSALACYYEKL 287
>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=slr0229 PE=3 SV=1
Length = 290
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 7/207 (3%)
Query: 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
GI P A+ +D ++ A E+ + + +DAPV+GGD+GA +G L I G
Sbjct: 84 GIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGG 143
Query: 66 DSAVVQWLTPLFEVLG-KPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
D + + P+ + +G K G +G GQ+ K+ NQ++ G + + +E + +++ G+
Sbjct: 144 DISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAP 203
Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVL 184
D GAAGS A+ +M E DF PG ++++KD+ + V E +E+ L
Sbjct: 204 ELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLKDLRL---VREAAENGP---L 257
Query: 185 PGAALGKQLFSAMVANGDGKFGTQGLV 211
PG L + LF+++ G G+Q ++
Sbjct: 258 PGVTLAESLFTSVQLLGGEDQGSQAII 284
>sp|Q9LSV0|GLYR1_ARATH Glyoxylate/succinic semialdehyde reductase 1 OS=Arabidopsis
thaliana GN=GLYR1 PE=1 SV=1
Length = 289
Score = 80.9 bits (198), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
D G++ + G Y+D ++ + +I + + V+ PVSG A DG+L I
Sbjct: 75 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLII 134
Query: 62 FAAGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD A+ + P F+VLGK +F +G G G K+ +++G+ + SEGLV AD++
Sbjct: 135 LAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS 194
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
GL D + GA + + G M + + P ++ KDM + + + DE
Sbjct: 195 GLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALAL----GDEN 250
Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
V +P AA + F + G G ++ ++
Sbjct: 251 AVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVK 285
>sp|Q5RKN4|GLYR1_DANRE Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1
Length = 462
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 2/173 (1%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YV+ ++ P E+ +V R ++APVSG + DG L I
Sbjct: 250 LGPSGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVSGSQQLSNDGMLVI 309
Query: 62 FAAGDSAVVQWLTPLFEVLGKPTFM--GGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
AAGD +V + + F+ +GK +F G AG + +V G+ + ++EGL A
Sbjct: 310 VAAGDRSVYEDCSSCFQAMGKTSFFIAGEAGNAARMMLILNMVQGSFMATIAEGLTLAQA 369
Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDV 172
G + + D + G S ++ + +++ +F+P + +++ KD+ + + +
Sbjct: 370 TGQSQQTFLDILCQGQMASTFVDQKCQNILQGNFKPDYYLKHIQKDLRLAISM 422
>sp|Q562D5|GLYR1_XENTR Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2
SV=1
Length = 534
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ P E+ +V R ++APVSG + DG L I
Sbjct: 323 LGPSGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 382
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD V + + F +GK + F+G G + +V G+ + ++EG+ A
Sbjct: 383 LAAGDQGVYEDCSSCFLAMGKTSFFLGEVGNAARMMLILNMVQGSFMATIAEGMTLAQVT 442
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 443 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 492
>sp|Q5ZLS7|GLYR1_CHICK Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 77.4 bits (189), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 342 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 401
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 402 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 461
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 462 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 511
>sp|Q5RKH0|GLYR1_RAT Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2
SV=1
Length = 552
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 341 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 400
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 401 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 460
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 461 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 510
>sp|Q922P9|GLYR1_MOUSE Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1
Length = 546
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 335 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 394
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 395 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 454
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 455 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 504
>sp|A4FUF0|GLYR1_BOVIN Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1
Length = 553
Score = 77.0 bits (188), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 342 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 401
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 402 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 461
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 462 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 511
>sp|Q49A26|GLYR1_HUMAN Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3
Length = 553
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 85/170 (50%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + PG YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 342 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 401
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 402 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHVT 461
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 462 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 511
>sp|Q54CX6|3HIDH_DICDI Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Dictyostelium discoideum GN=hibA PE=3 SV=1
Length = 321
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 98/208 (47%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI + PG + +D+++ PA ARE+ +A++ +D PVSGG GA G L
Sbjct: 100 NGIFQTVRPGTLLLDSSTIDPATAREVASIAKKHQSTMLDCPVSGGTGGAEAGTLTFMVG 159
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G E +GK G G GQ K+ N +V+G +++ +SE + + G+D
Sbjct: 160 GSEQDFNTAKTYLECMGKNIVHCGDVGTGQVAKVCNNLVLGISMIAVSEAMNLGVKQGMD 219
Query: 124 VRKWRDAVKGGAAGSMAMELYG------ERMIEKDFRPGGF-AEYMVKDMGMGVDVVEES 176
+K +A ELY E GGF + M KD+G+ VD +
Sbjct: 220 PKKLAGIFNTSSARCWTSELYNPCPGVIETSPASRGYTGGFGSALMTKDLGLAVDSAKSI 279
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ ++L +A QL++ +VA GDG+
Sbjct: 280 GEP--LLLGNSA--HQLYTLLVAKGDGQ 303
>sp|Q5R7T2|GLYR1_PONAB Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2
Length = 553
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 1/170 (0%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L P G++ + P YVD ++ E+ +V R ++APVSG + DG L I
Sbjct: 342 LGPSGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 401
Query: 62 FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
AAGD + + + F+ +GK + F+G G + +V G+ + ++EGL A
Sbjct: 402 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 461
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV 170
G + D + G S+ ++ + +++ +F+P + +Y+ KD+ + +
Sbjct: 462 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAI 511
>sp|F4I907|GLYR2_ARATH Glyoxylate/succinic semialdehyde reductase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLYR2 PE=1 SV=1
Length = 358
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 7/192 (3%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+G + ++ G YVD ++ A + I K ++ ++APVSG A DG+L A
Sbjct: 144 NGAIFGISSGKGYVDVSTVDVASSILISKQIKDTGALFLEAPVSGSKKPAEDGQLIFLTA 203
Query: 65 GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
GD + + P +++GK F +G G G + K+ +++G+ + +EG++ + + GLD
Sbjct: 204 GDKPLYEKAAPFLDIMGKSKFYLGEVGNGAAMKLVVNMIMGSMMASFAEGILLSQKVGLD 263
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA-EYMVKDMGMGVDVVEESEDERVV 182
+ V GA + L G MI K P F ++ KDM + + + E
Sbjct: 264 PNVLVEVVSQGAINAPMYSLKGPSMI-KSVYPTAFPLKHQQKDMRLALGLAESVSQST-- 320
Query: 183 VLPGAALGKQLF 194
P AA +L+
Sbjct: 321 --PIAAAANELY 330
>sp|P63935|MMSB_MYCTU Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium
tuberculosis GN=mmsB PE=3 SV=1
Length = 294
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGD 66
+++A P +++D+++ ARE+ +A +DAPVSGG GA LA GD
Sbjct: 78 VLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGD 137
Query: 67 SAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR 125
+ ++ P+ E + GK G AG GQ+ K+ N +V+ + ++E V A++ GL +
Sbjct: 138 ESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQ 197
Query: 126 KWRDAVKGGAAGSMAMEL-------YGERMIEKDFRPGGFAEYMVKDMGMGVDVVEES 176
D + G A+ DF+PG M KD+G+ +D V +
Sbjct: 198 SLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAAT 255
>sp|P63936|MMSB_MYCBO Probable 3-hydroxyisobutyrate dehydrogenase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=mmsB PE=3 SV=1
Length = 294
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 8/178 (4%)
Query: 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGD 66
+++A P +++D+++ ARE+ +A +DAPVSGG GA LA GD
Sbjct: 78 VLAAARPATLFIDSSTISVTDAREVHALAESHGMLQLDAPVSGGVKGAAAATLAFMVGGD 137
Query: 67 SAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR 125
+ ++ P+ E + GK G AG GQ+ K+ N +V+ + ++E V A++ GL +
Sbjct: 138 ESTLRRARPVLEPMAGKIIHCGAAGAGQAAKVCNNMVLAVQQIAIAEAFVLAEKLGLSAQ 197
Query: 126 KWRDAVKGGAAGSMAMEL-------YGERMIEKDFRPGGFAEYMVKDMGMGVDVVEES 176
D + G A+ DF+PG M KD+G+ +D V +
Sbjct: 198 SLFDVITGATGNCWAVHTNCPVPGPVPTSPANNDFKPGFSTALMNKDLGLAMDAVAAT 255
>sp|Q9V8M5|3HIDH_DROME Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Drosophila melanogaster GN=CG15093 PE=2 SV=2
Length = 324
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 14/203 (6%)
Query: 11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVV 70
+N +++D+++ P L + + K + +DAPVSGG GA L G A
Sbjct: 110 VNKDTIFIDSSTISPDLVKSLQKKISAKGARFIDAPVSGGVPGAEQATLTFMVGGTEAEY 169
Query: 71 QWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRD 129
+ + E +GK T G G GQ+ K+ N +++ +++G+SE + A GLD + +
Sbjct: 170 NAVKAVLECMGKKITHCGVYGMGQAAKLCNNMMLAISMIGVSEAMNLAVRQGLDANVFAE 229
Query: 130 AVKGGAAGSMAMELYG-------ERMIEKDFRPGGFAEYMV-KDMGMGVDVVEESEDERV 181
+ A E+Y +D+ GGF+ ++ KD+G+ V S
Sbjct: 230 IINSSTGRCWASEIYNPVPGVCPSAPANRDY-AGGFSSALITKDLGLASGVANASNSP-- 286
Query: 182 VVLPGAALGKQLFSAMVANGDGK 204
+P +L +++ ++ G G
Sbjct: 287 --IPLGSLAHKVYQSLCDKGLGN 307
>sp|P28811|MMSB_PSEAE 3-hydroxyisobutyrate dehydrogenase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=mmsB PE=2 SV=1
Length = 298
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 12/202 (5%)
Query: 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
L DG+++ + + +D ++ P AR++ + A + +DAPVSGG GAR G L+
Sbjct: 76 LGDDGLLARVAGKPLLIDCSTIAPETARKVAEAAAAKGLTLLDAPVSGGVGGARAGTLSF 135
Query: 62 FAAGDSAVVQWLTPLFEVLGKPTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
G + P+ E +G+ F G G GQ KI N +++G + G +E L +
Sbjct: 136 IVGGPAEGFARARPVLENMGRNIFHAGDHGAGQVAKICNNMLLGILMAGTAEALALGVKN 195
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYG------ERMIEKDFRPGGF-AEYMVKDMGMGVDVV 173
GLD + +K + G+ A+ LY + + GGF M KD+G+ +
Sbjct: 196 GLDPAVLSEVMKQSSGGNWALNLYNPWPGVMPQAPASNGYAGGFQVRLMNKDLGLALANA 255
Query: 174 EESEDERVVVLPGAALGKQLFS 195
+ + P AL + LFS
Sbjct: 256 QAVQAST----PLGALARNLFS 273
>sp|Q46888|YGBJ_ECOLI Uncharacterized oxidoreductase YgbJ OS=Escherichia coli (strain
K12) GN=ygbJ PE=3 SV=1
Length = 302
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 6/215 (2%)
Query: 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
G+ L PG + +++ A A+EI D +DAPVSGG + A +G++ + A+G
Sbjct: 86 GVAQHLKPGTAVMVSSTIASADAQEIATALAGFDLEMLDAPVSGGAVKAANGEMTVMASG 145
Query: 66 DSAVVQWLTPLFEVLGKPTFMGGA--GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
+ L P+ E + + GA G G + KI +Q++ G ++ +E + A AG+
Sbjct: 146 SDIAFERLAPVLEAVAGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIP 205
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVV 183
+ D V A S E +++ D+ P + VKD+G+ V ++
Sbjct: 206 LDVMYDVVTNAAGNSWMFENRMRHVVDGDYTPHSAVDIFVKDLGL----VADTAKALHFP 261
Query: 184 LPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
LP A+ +F++ G GK ++ + I
Sbjct: 262 LPLASTALNMFTSASNAGYGKEDDSAVIKIFSGIT 296
>sp|Q99L13|3HIDH_MOUSE 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Mus musculus
GN=Hibadh PE=2 SV=1
Length = 335
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L
Sbjct: 116 NGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 175
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G L E +G + G G GQS KI N +++ +++G +E + +GLD
Sbjct: 176 GVEDEFAAAQELLECMGSNVVYCGAVGTGQSAKICNNMLLAISMIGTAEAMNLGIRSGLD 235
Query: 124 VRKWRDAVKGGAAGSMAMELYG------ERMIEKDFRPGGF-AEYMVKDMGMGVDVVEES 176
+ + + + + Y + + GGF M KD+G+ D +
Sbjct: 236 PKLLAKILNMSSGRCWSSDTYNPVPGVMHGVPSSNNYQGGFGTTLMAKDLGLAQD---SA 292
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ +L G +L Q++ M + G K
Sbjct: 293 TSTKTPILLG-SLAHQIYRMMCSKGYSK 319
>sp|Q175F8|GLYR1_AEDAE Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti
GN=AAEL006684 PE=3 SV=1
Length = 559
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 7/173 (4%)
Query: 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
G++SA G YV+ T P + +I + + ++A + G A +G L I AAG
Sbjct: 352 GVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAG 411
Query: 66 DSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
+ + + FE + + +F MG G + Q++ G L G++EGL AD AGL
Sbjct: 412 ERLLFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAGIAEGLALADRAGL-- 469
Query: 125 RKWRDAVKGGAAGSMAMELY---GERMIEKDFRPGGFAEYMVKDMGMGVDVVE 174
+ +D ++ SM+ EL G +I+ +F P ++M KD+ + +++ E
Sbjct: 470 -QQKDVLEVLELTSMSSELVMQKGNAIIKGEFPPQQALKHMQKDLKLALNMAE 521
>sp|Q5R5E7|3HIDH_PONAB 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Pongo abelii
GN=HIBADH PE=2 SV=1
Length = 336
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 92/208 (44%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ + G++ +D+++ PA+++E+ K + +DAPVSGG AR G L
Sbjct: 117 NGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 176
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G L +G + G G GQ+ KI N +++ +++G +E + GLD
Sbjct: 177 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLD 236
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRP------GGF-AEYMVKDMGMGVDVVEES 176
+ + + + + Y D P GGF A M KD+G+ D +
Sbjct: 237 PKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGATLMAKDLGLAQDSATST 296
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ ++ +L Q++ M A G K
Sbjct: 297 KSPILL----GSLAHQIYRMMCAKGYSK 320
>sp|P29266|3HIDH_RAT 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Rattus
norvegicus GN=Hibadh PE=1 SV=3
Length = 335
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ + G++ +D+++ P++++E+ K + +DAPVSGG AR G L
Sbjct: 116 NGILKKVKKGSLLIDSSTIDPSVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 175
Query: 65 GDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G L +G + G G GQS KI N +++ +++G +E + +GLD
Sbjct: 176 GVENEFAAAQELLGCMGSNVLYCGAVGSGQSAKICNNMLLAISMIGTAEAMNLGIRSGLD 235
Query: 124 VRKWRDAVKGGAAGSMAMELYG------ERMIEKDFRPGGF-AEYMVKDMGMGVDVVEES 176
+ + + + + Y + + + GGF M KD+G+ D +
Sbjct: 236 PKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSSNNYQGGFGTTLMAKDLGLAQD---SA 292
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ +L G ++ Q++ M + G K
Sbjct: 293 TSTKTPILLG-SVAHQIYRMMCSKGYSK 319
>sp|P31937|3HIDH_HUMAN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Homo sapiens
GN=HIBADH PE=1 SV=2
Length = 336
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 91/208 (43%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ + G++ +D+++ PA+++E+ K + +DAPVSGG AR G L
Sbjct: 117 NGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 176
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G L +G + G G GQ+ KI N +++ +++G +E + GLD
Sbjct: 177 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLD 236
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRP------GGF-AEYMVKDMGMGVDVVEES 176
+ + + + + Y D P GGF M KD+G+ D +
Sbjct: 237 PKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATST 296
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ ++ +L Q++ M A G K
Sbjct: 297 KSPILL----GSLAHQIYRMMCAKGYSK 320
>sp|Q9SUC0|3HIDH_ARATH Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Arabidopsis thaliana GN=At4g20930 PE=2 SV=3
Length = 347
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 18/179 (10%)
Query: 15 AVYVDTTSSHPALAREI------FKVARERDCWA----VDAPVSGGDIGARDGKLAIFAA 64
A+++D+++ P R+I + +RD W +DAPVSGG + A G L
Sbjct: 127 ALFIDSSTIDPQTTRKISLAVSNCNLKEKRDNWEKPVMLDAPVSGGVLAAEAGTLTFMVG 186
Query: 65 GDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G P+ + +G+ + + GG+G G + KI N + + ++LG SE L G+
Sbjct: 187 GPEDAYLAARPILQSMGRTSIYCGGSGNGSAAKICNNLAMAVSMLGTSEALALGQSLGIS 246
Query: 124 VRKWRDAVKGGAAGSMAMELYGE-------RMIEKDFRPGGFAEYMVKDMGMGVDVVEE 175
+ + + + + Y +D+ G ++ M KD+ + EE
Sbjct: 247 ASTLTEVLNTSSGRCWSSDAYNPVPGVMKGVPSSRDYNGGFASKLMAKDLNLAAASAEE 305
>sp|P44979|Y1010_HAEIN Uncharacterized oxidoreductase HI_1010 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1010
PE=3 SV=1
Length = 301
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 2/166 (1%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI L G + +++ A+ I + E +DAPVSGG A G++ + A+
Sbjct: 84 NGIAKKLKAGTAVMVSSTMAAQDAQIISQKLTELGLIMLDAPVSGGAAKALKGEMTVMAS 143
Query: 65 GDSAVVQWLTPLFEVLGKPTFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
G + L P+ + + G G G + KI +Q++ G ++ +E + A +AG+
Sbjct: 144 GSKQAFELLQPVLDATAAKVYNIGEEIGLGATVKIVHQLLAGVHIAAGAEAMALASKAGI 203
Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGM 168
+ D V A S E + ++E D+ P + VKD+G+
Sbjct: 204 PLDVMYDVVTNAAGNSWMFENRMKHVVEGDYTPLSMVDIFVKDLGL 249
>sp|Q8T079|GLYR1_DROME Putative oxidoreductase GLYR1 homolog OS=Drosophila melanogaster
GN=CG4747 PE=1 SV=1
Length = 602
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 17 YVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPL 76
YV+ ++ P + +I + ++ + ++A + G A +G L I A GD +V +
Sbjct: 406 YVEMSTIDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSC 465
Query: 77 FEVLGKPTFMGGAGCGQSCKIAN--QIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG 134
F+ + K TF G G +CK+ Q ++G +L+GL+E L AD + + D
Sbjct: 466 FKTIAKNTFFLG-NIGNACKVNLILQTILGVSLVGLAEALALADRFSISLNDIIDIFDLT 524
Query: 135 AAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLF 194
+ S + G+ M + DF P +M +D+ + +++ E + +P ++ ++F
Sbjct: 525 SMKSPMLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQS----MPVTSITNEVF 580
>sp|Q2HJD7|3HIDH_BOVIN 3-hydroxyisobutyrate dehydrogenase, mitochondrial OS=Bos taurus
GN=HIBADH PE=2 SV=1
Length = 336
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 12/208 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+GI+ + G++ +D+++ P +++E+ K + +DAPVSGG AR G L
Sbjct: 117 NGILKKVKKGSLLIDSSTIDPMVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 176
Query: 65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G L +G + G G GQ+ KI N +++ +++G +E + GLD
Sbjct: 177 GVEEEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNLLLAISMIGTAEAMNLGIRLGLD 236
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRP------GGF-AEYMVKDMGMGVDVVEES 176
+ + + + + Y D P GGF M KD+G+ D +
Sbjct: 237 PKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSATST 296
Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
+ +L G+ Q++ M A G K
Sbjct: 297 KSP---ILLGSQ-AHQIYRMMCAKGYSK 320
>sp|Q7Q161|GLYR1_ANOGA Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae
GN=AGAP009949 PE=3 SV=5
Length = 566
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
G++SA G YV+ T P + +I + + ++A + G A +G L I A+G
Sbjct: 359 GVMSANLAGKGYVEMTGVDPETSNDINEAIISKGGRYLEAQIQGSKNQAEEGTLIILASG 418
Query: 66 DSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
D + + FE + + +F +G G + Q++ G L G++E + AD AGL
Sbjct: 419 DRLLFEECQSCFEAISRNSFYLGDVGNATKMNLILQMISGITLAGVAEAMALADRAGLQQ 478
Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVL 184
+ + ++ S M G +I+ +F ++M KD+ + + + + E L
Sbjct: 479 KDVLEVLELTNMSSEMMLQKGNAIIKGEFPTHHALKHMQKDLKLALSLADGLEQS----L 534
Query: 185 PGAALGKQLF 194
P A +++
Sbjct: 535 PITAASNEVY 544
>sp|Q29NG1|GLYR1_DROPS Putative oxidoreductase GLYR1 homolog OS=Drosophila pseudoobscura
pseudoobscura GN=GA18401 PE=3 SV=2
Length = 612
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 83/180 (46%), Gaps = 7/180 (3%)
Query: 17 YVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPL 76
YV+ ++ P + +I + ++ + ++A + G A DG L I A GD V +
Sbjct: 416 YVEMSTVDPDTSLDIGEGIKQCNGRYLEAQIHGSRQEAADGMLIILAGGDRTVFEECHSC 475
Query: 77 FEVLGKPTFMGGAGCGQSCKIAN--QIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG 134
F+ + K TF G G +CK+ Q + +L+GL+E L AD + + D
Sbjct: 476 FKTIAKNTFFLG-NVGNACKVNLILQTIQAVSLVGLAEALALADRFSISLNDIIDIFDLT 534
Query: 135 AAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLF 194
+ S + G+ M + DF P +M +D+ + +++ E + +P ++ ++F
Sbjct: 535 SMKSPLLLAKGKEMAKGDFNPQQPLSHMQRDLRLVLNMAENLDQS----MPVTSITNEVF 590
>sp|O34969|YFJR_BACSU Uncharacterized oxidoreductase YfjR OS=Bacillus subtilis (strain
168) GN=yfjR PE=3 SV=2
Length = 286
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 18/219 (8%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
DG++ L +++ ++ + ++ E+ + + APV G A L I A
Sbjct: 78 DGLLEGLAENGIHISMSTISVEFSEKLAAAHAEKGQFFLAAPVLGRPDAAAKAALRIITA 137
Query: 65 GDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLL------GLSEGLVFAD 118
G + Q PL + L + F G+ K AN + N L LSE + +
Sbjct: 138 GPAEAKQAAKPLLDSLSQQIF----DVGEESKTANAAKISINFLLVSMLEALSESFLMME 193
Query: 119 EAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYM-VKDMGMGVDVVEESE 177
+ GL+ +++ + + GS + YG M E+ F P GF + +KD + +
Sbjct: 194 KYGLEQKQFLE-IASALFGSPVYQNYGTIMAEQKFEPAGFKMSLGLKDTNLALAAA---- 248
Query: 178 DERVVV-LPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
+RV LP A L K F + + G G L+ I+
Sbjct: 249 -KRVSANLPLAELAKSHFESGIEKGFGDLDWAALIKCIK 286
>sp|Q9XTI0|3HIDH_CAEEL Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial
OS=Caenorhabditis elegans GN=B0250.5 PE=3 SV=1
Length = 299
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 85/198 (42%), Gaps = 13/198 (6%)
Query: 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA-A 64
GI + PG + +D+++ ++ E+ + A +DAP+SGG GA+ L A
Sbjct: 80 GIFKTIQPGTLCMDSSTIDQIVSLEVAQAAALLKAEYIDAPISGGVTGAQQATLTFMVGA 139
Query: 65 GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
G+ A + + ++GK +G G G + KI N +++G ++ ++E + GLD
Sbjct: 140 GNDATFKRAEAVLSLMGKNIVNLGAVGNGTAAKICNNMLLGIQMVAVAETMNLGISMGLD 199
Query: 124 VRKWRDAVKGGAAGSMAMELYG------ERMIEKDFRPGGF-AEYMVKDMGMGVDVVEES 176
+ V + + + Y E + GGF M KD+ + + +
Sbjct: 200 AKALAGIVNTSSGRCWSSDTYNPVPGVIENIPSCRGYAGGFGTTLMAKDLSLAQNASTNT 259
Query: 177 EDERVVVLPGAALGKQLF 194
+ P +L Q++
Sbjct: 260 QAPT----PMGSLAHQIY 273
>sp|P0A9V9|YIHU_SHIFL Uncharacterized oxidoreductase YihU OS=Shigella flexneri GN=yihU
PE=3 SV=1
Length = 298
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+G+ L+ A+ +D ++ HP ++ + + +D PV A G L + A
Sbjct: 79 NGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAG 138
Query: 65 GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCK-IANQIVVGANLLGLSEGLVFADEAGL 122
G + V+ TP+ +G GG G G K I N + + N L +E V + L
Sbjct: 139 GTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNL 197
Query: 123 DVRKWRDAVKGGAAGSMAMEL-YGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
+ G AAG + +++ D P + KD+G+ +DV +
Sbjct: 198 PFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH---- 253
Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
V +P A ++++S A G G+ Q +++E++
Sbjct: 254 VPMPLGAASREVYSQARAAGRGR---QDWSAILEQV 286
>sp|P0A9V8|YIHU_ECOLI Uncharacterized oxidoreductase YihU OS=Escherichia coli (strain
K12) GN=yihU PE=3 SV=1
Length = 298
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 11/216 (5%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
+G+ L+ A+ +D ++ HP ++ + + +D PV A G L + A
Sbjct: 79 NGVCEGLSTDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSANAITGTLLLLAG 138
Query: 65 GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCK-IANQIVVGANLLGLSEGLVFADEAGL 122
G + V+ TP+ +G GG G G K I N + + N L +E V + L
Sbjct: 139 GTAEQVERATPILMAMGSELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALNL 197
Query: 123 DVRKWRDAVKGGAAGSMAMEL-YGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
+ G AAG + +++ D P + KD+G+ +DV +
Sbjct: 198 PFDVAVKVMSGTAAGKGHFTTSWPNKVLSGDLSPAFMIDLAHKDLGIALDVANQLH---- 253
Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
V +P A ++++S A G G+ Q +++E++
Sbjct: 254 VPMPLGAASREVYSQARAAGRGR---QDWSAILEQV 286
>sp|Q9L7S0|YIHU_SALTY Uncharacterized oxidoreductase YihU OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=yihU PE=3 SV=1
Length = 298
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 85/203 (41%), Gaps = 8/203 (3%)
Query: 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
G+ L+ A+ +D ++ HP + + + +D P+ A G L + A
Sbjct: 79 QGVCETLSREALVIDMSTIHPLQTDNLIADMQSKGFSMMDVPIGRTSDNAITGTLLLLAG 138
Query: 65 GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCK-IANQIVVGANLLGLSEGLVFADEAGL 122
G + V+ TP+ +G GG G G K I N + + N L +E V + GL
Sbjct: 139 GTAEQVERATPVLMAMGNELVNTGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGL 197
Query: 123 DVRKWRDAVKGGAAGS-MAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
+ G AAG + ++++ D P + KD+G+ +DV +
Sbjct: 198 SFDVALKVMSGTAAGKGHFTTTWPNKVMKGDLSPAFMIDLAHKDLGIALDVANQLH---- 253
Query: 182 VVLPGAALGKQLFSAMVANGDGK 204
V +P A +++++ A G G+
Sbjct: 254 VPMPLGAASREVYNLARAAGRGR 276
>sp|Q8CR47|XYLB_STAES D-xylulose kinase OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=xylB PE=3 SV=1
Length = 496
Score = 35.0 bits (79), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 93 QSCKIANQIVVGANLLGLSEGLVFADEAGLDVRK---WRDAVKGGAAGSMAMELYGERMI 149
QS +++++IV G + G GLV D+ G+ +RK W D + ++YGER+
Sbjct: 65 QSTEMSDKIVKGISFSGQMHGLVIVDDNGIPLRKAILWNDT-RNSIQCRQIEDIYGERL- 122
Query: 150 EKDFRP 155
++ P
Sbjct: 123 --NYNP 126
>sp|Q5HL88|XYLB_STAEQ D-xylulose kinase OS=Staphylococcus epidermidis (strain ATCC 35984
/ RP62A) GN=xylB PE=3 SV=1
Length = 496
Score = 34.7 bits (78), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 93 QSCKIANQIVVGANLLGLSEGLVFADEAGLDVRK---WRDAVKGGAAGSMAMELYGERMI 149
QS +++++IV G + G GLV D+ G+ +RK W D + ++YGER+
Sbjct: 65 QSTEMSDKIVKGISFSGQMHGLVIVDDNGIPLRKAILWNDT-RNSIQCRQIEDIYGERL- 122
Query: 150 EKDFRP 155
++ P
Sbjct: 123 --NYNP 126
>sp|P54448|YQEC_BACSU Putative 6-phosphogluconate dehydrogenase YqeC OS=Bacillus subtilis
(strain 168) GN=yqeC PE=3 SV=1
Length = 297
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 12/131 (9%)
Query: 4 PDGIVSA--------LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGAR 55
P GIV A L+ G + ++ +SH + + +E +DA SGG GAR
Sbjct: 68 PHGIVDAVLRDVSPLLSKGDMIIEAGNSHYKESIRRYNQMKEAGIHYLDAGTSGGMEGAR 127
Query: 56 DGKLAIFAAGDSAVVQWLTPLFE---VLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSE 112
G GD + + PLF V + G AG G K+ + + + + E
Sbjct: 128 HGA-CFMVGGDHEAWEIVEPLFRDTAVENGYLYAGEAGSGHFLKMIHNGIEYGMMAAIGE 186
Query: 113 GLVFADEAGLD 123
G + + D
Sbjct: 187 GFEVLENSQFD 197
>sp|P70718|6PGD_AGGAC 6-phosphogluconate dehydrogenase, decarboxylating
OS=Aggregatibacter actinomycetemcomitans GN=gnd PE=3
SV=1
Length = 484
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 5 DGIVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
D ++ L G + +D S++P R + + RE+ + VSGG+ GAR G +I
Sbjct: 87 DALLPHLEAGDIIIDGGNSNYPDTNRRVAAL-REKGIRFIGTGVSGGEEGARHGP-SIMP 144
Query: 64 AGDSAVVQWLTPLFEVLGKPTFMGGAGC 91
G+ Q++ P+ + + T G C
Sbjct: 145 GGNEEAWQFVKPVLQAISAKTEQGEPCC 172
>sp|P12013|6PGD_BACSU 6-phosphogluconate dehydrogenase, decarboxylating OS=Bacillus
subtilis (strain 168) GN=gntZ PE=3 SV=1
Length = 468
Score = 33.1 bits (74), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 24/171 (14%)
Query: 5 DGIVSALNP----GAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
D ++ +L P G V +D +SH + +E+ + +SGG++GA G +
Sbjct: 80 DSVIQSLKPLLEEGDVIMDGGNSHYEDTERRYDELKEKGIGYLGVGISGGEVGALTGP-S 138
Query: 61 IFAAGDSAVVQWLTPLFEVLGKP-------TFMGGAGCGQSCKIANQIVVGANLLGLSEG 113
I GD V + P+ + ++G G G K+ + + A++ ++E
Sbjct: 139 IMPGGDRDVYEKAAPILTKIAAQVGDDPCCVYIGPKGAGHFTKMVHNGIEYADMQLIAEA 198
Query: 114 LVF--------ADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPG 156
F DE W G S +E+ E + +KD + G
Sbjct: 199 YTFLRETLRLPLDEIASIFETWNQ----GELKSYLIEITAEILRKKDEKTG 245
>sp|O87386|SOXA_RHIME Sarcosine oxidase subunit alpha OS=Rhizobium meliloti (strain 1021)
GN=soxA PE=3 SV=2
Length = 987
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFK--VARERDCWAVDAPVSGGDIGARDGK 58
A +P+ +V+ G +T A +E+++ AR ++ W P DIGA +G
Sbjct: 64 AAEPNALVTVGRGGRAEPNTR----ATMQELYEGLEARSQNRW----PSLAFDIGALNGL 115
Query: 59 LAIF--AAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQ------------IVVG 104
L+ F A W PL+E L +P AG G++ A+ +V+G
Sbjct: 116 LSPFLGAGFYYKTFMWPAPLWEKLYEPVIRRAAGLGKASYEADPDAYEKSWAHCDLLVIG 175
Query: 105 ANLLGLSEGLV 115
A GL+ L
Sbjct: 176 AGPTGLAAALT 186
>sp|O07727|DAO_MYCTU Probable D-amino-acid oxidase OS=Mycobacterium tuberculosis GN=aao
PE=3 SV=1
Length = 320
Score = 31.2 bits (69), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 101 IVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE 160
IV+GA + GL+ + A EAG VR W A+ ++A ++G R E + G+ E
Sbjct: 9 IVIGAGVSGLTSAICLA-EAGWPVRVWAAALPQQTTSAVAGAVWGPRPKEPVAKVRGWIE 67
Query: 161 Y-------MVKDMGMGV 170
+ KD GV
Sbjct: 68 QSLHVFRDLAKDPATGV 84
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.138 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,931,160
Number of Sequences: 539616
Number of extensions: 4013393
Number of successful extensions: 10320
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 10226
Number of HSP's gapped (non-prelim): 62
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)