Query 044696
Match_columns 220
No_of_seqs 219 out of 1227
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 09:57:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3obb_A Probable 3-hydroxyisobu 100.0 1.4E-54 4.6E-59 373.5 22.5 214 2-219 78-299 (300)
2 4gbj_A 6-phosphogluconate dehy 100.0 6.2E-51 2.1E-55 350.3 24.2 211 6-220 82-295 (297)
3 4dll_A 2-hydroxy-3-oxopropiona 100.0 7.3E-42 2.5E-46 296.3 24.2 211 3-219 107-318 (320)
4 3doj_A AT3G25530, dehydrogenas 100.0 1.2E-41 4.1E-46 293.6 24.7 212 2-217 96-308 (310)
5 3pdu_A 3-hydroxyisobutyrate de 100.0 5.5E-41 1.9E-45 286.1 22.8 210 2-215 76-286 (287)
6 3g0o_A 3-hydroxyisobutyrate de 100.0 8E-41 2.7E-45 287.4 23.1 213 2-218 83-297 (303)
7 3pef_A 6-phosphogluconate dehy 100.0 5.4E-41 1.9E-45 286.1 21.6 210 2-215 76-286 (287)
8 2h78_A Hibadh, 3-hydroxyisobut 100.0 5.7E-39 1.9E-43 275.2 24.1 213 3-219 79-299 (302)
9 3l6d_A Putative oxidoreductase 100.0 1E-38 3.5E-43 275.0 15.3 203 6-217 87-296 (306)
10 3qha_A Putative oxidoreductase 100.0 2.6E-36 8.9E-41 258.7 20.6 193 6-205 90-294 (296)
11 1vpd_A Tartronate semialdehyde 100.0 8.9E-34 3.1E-38 242.0 23.9 213 4-220 82-295 (299)
12 4ezb_A Uncharacterized conserv 100.0 1.3E-34 4.5E-39 250.6 17.0 199 6-217 106-312 (317)
13 3cky_A 2-hydroxymethyl glutara 100.0 8.1E-33 2.8E-37 236.3 24.3 211 5-219 82-294 (301)
14 1yb4_A Tartronic semialdehyde 100.0 1E-32 3.5E-37 234.9 23.8 211 5-219 80-291 (295)
15 3qsg_A NAD-binding phosphogluc 100.0 3E-33 1E-37 241.4 14.5 187 6-204 102-292 (312)
16 2gf2_A Hibadh, 3-hydroxyisobut 100.0 7.4E-32 2.5E-36 229.8 22.8 208 6-217 79-294 (296)
17 2cvz_A Dehydrogenase, 3-hydrox 100.0 3.7E-32 1.3E-36 230.6 19.7 208 7-219 76-285 (289)
18 2uyy_A N-PAC protein; long-cha 100.0 1.8E-31 6E-36 229.9 21.9 206 6-215 109-315 (316)
19 4e21_A 6-phosphogluconate dehy 100.0 8.1E-31 2.8E-35 230.3 18.1 202 6-219 100-352 (358)
20 4gwg_A 6-phosphogluconate dehy 100.0 8.4E-30 2.9E-34 231.3 18.2 187 6-197 88-293 (484)
21 2p4q_A 6-phosphogluconate dehy 99.9 2.1E-26 7.2E-31 210.0 19.2 180 6-190 94-290 (497)
22 2zyd_A 6-phosphogluconate dehy 99.9 1.1E-24 3.8E-29 198.0 17.8 180 6-190 98-295 (480)
23 2pgd_A 6-phosphogluconate dehy 99.9 2.4E-23 8.2E-28 189.3 18.8 185 6-195 86-289 (482)
24 1i36_A Conserved hypothetical 99.9 9.5E-24 3.2E-28 177.0 14.9 181 7-206 76-258 (264)
25 2iz1_A 6-phosphogluconate dehy 99.9 4.8E-23 1.6E-27 187.0 19.5 180 6-190 88-287 (474)
26 3g79_A NDP-N-acetyl-D-galactos 99.9 2.9E-23 1E-27 188.1 15.9 180 5-197 131-332 (478)
27 4a7p_A UDP-glucose dehydrogena 99.9 2.7E-23 9.2E-28 187.1 14.3 176 6-197 114-304 (446)
28 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.9 3.8E-22 1.3E-26 181.3 19.8 180 6-190 88-285 (478)
29 3gg2_A Sugar dehydrogenase, UD 99.9 1.4E-22 4.9E-27 182.8 12.7 177 6-197 107-300 (450)
30 3ojo_A CAP5O; rossmann fold, c 99.9 1.5E-21 5.2E-26 174.8 11.3 172 4-195 112-296 (431)
31 2q3e_A UDP-glucose 6-dehydroge 99.8 8.9E-21 3.1E-25 171.7 10.4 175 6-200 116-307 (467)
32 3pid_A UDP-glucose 6-dehydroge 99.8 1.5E-19 5E-24 161.9 16.5 170 6-196 139-318 (432)
33 2o3j_A UDP-glucose 6-dehydroge 99.8 5.3E-20 1.8E-24 167.3 12.9 175 6-195 120-315 (481)
34 2y0c_A BCEC, UDP-glucose dehyd 99.8 8.2E-19 2.8E-23 159.3 13.6 176 6-197 113-310 (478)
35 1mv8_A GMD, GDP-mannose 6-dehy 99.7 5.7E-18 2E-22 152.0 11.1 175 7-197 106-300 (436)
36 1dlj_A UDP-glucose dehydrogena 99.7 9.5E-17 3.2E-21 142.8 16.2 172 6-197 103-290 (402)
37 2ahr_A Putative pyrroline carb 99.5 1.7E-13 5.6E-18 114.2 14.0 174 7-199 76-258 (259)
38 1yqg_A Pyrroline-5-carboxylate 99.5 2.1E-13 7.2E-18 113.6 12.4 162 14-201 81-259 (263)
39 2ew2_A 2-dehydropantoate 2-red 99.5 3.4E-14 1.2E-18 120.8 6.4 187 6-200 93-312 (316)
40 1ks9_A KPA reductase;, 2-dehyd 99.4 3E-14 1E-18 119.9 3.9 178 6-198 82-289 (291)
41 3dtt_A NADP oxidoreductase; st 99.4 1.2E-14 4.2E-19 120.7 1.5 94 13-106 116-231 (245)
42 3vtf_A UDP-glucose 6-dehydroge 99.3 1.3E-11 4.4E-16 110.6 12.3 170 12-197 135-316 (444)
43 1z82_A Glycerol-3-phosphate de 99.3 8.6E-13 3E-17 114.1 4.2 187 13-214 103-323 (335)
44 1txg_A Glycerol-3-phosphate de 99.3 4.9E-12 1.7E-16 108.6 8.2 176 7-195 91-319 (335)
45 1evy_A Glycerol-3-phosphate de 99.3 1.4E-12 4.8E-17 113.9 4.5 185 5-195 107-330 (366)
46 2qyt_A 2-dehydropantoate 2-red 99.3 1.5E-12 5E-17 111.0 3.1 179 7-196 103-313 (317)
47 1zej_A HBD-9, 3-hydroxyacyl-CO 99.2 6.9E-12 2.3E-16 107.0 6.1 112 8-139 95-212 (293)
48 2izz_A Pyrroline-5-carboxylate 99.2 1.3E-10 4.5E-15 100.0 12.0 186 6-209 103-299 (322)
49 3k96_A Glycerol-3-phosphate de 99.2 6.6E-11 2.3E-15 103.5 9.4 194 6-214 118-348 (356)
50 3c24_A Putative oxidoreductase 99.1 9.6E-11 3.3E-15 98.9 8.4 125 6-134 86-231 (286)
51 2rcy_A Pyrroline carboxylate r 99.1 5.9E-10 2E-14 92.6 12.5 175 7-201 78-261 (262)
52 3d1l_A Putative NADP oxidoredu 99.1 2.1E-11 7.1E-16 101.8 2.4 122 7-135 88-214 (266)
53 1x0v_A GPD-C, GPDH-C, glycerol 99.1 1.3E-10 4.5E-15 100.6 6.4 180 7-195 110-335 (354)
54 1yj8_A Glycerol-3-phosphate de 99.0 1.2E-09 4.2E-14 95.6 10.2 177 10-195 130-353 (375)
55 1bg6_A N-(1-D-carboxylethyl)-L 98.9 1E-09 3.4E-14 94.9 6.4 187 6-200 94-332 (359)
56 2dpo_A L-gulonate 3-dehydrogen 98.8 2.1E-08 7.3E-13 86.3 10.2 115 7-138 109-231 (319)
57 1jay_A Coenzyme F420H2:NADP+ o 98.8 8.1E-09 2.8E-13 82.9 6.8 93 13-107 89-200 (212)
58 3mog_A Probable 3-hydroxybutyr 98.8 5.7E-09 2E-13 94.7 5.6 108 7-135 106-224 (483)
59 2i76_A Hypothetical protein; N 98.7 3.9E-08 1.3E-12 82.6 8.0 114 12-133 80-200 (276)
60 2f1k_A Prephenate dehydrogenas 98.5 7.6E-07 2.6E-11 74.3 11.6 118 7-132 77-209 (279)
61 2yjz_A Metalloreductase steap4 97.9 1.4E-08 4.7E-13 81.8 0.0 83 11-99 95-193 (201)
62 3k6j_A Protein F01G10.3, confi 98.5 2.1E-07 7.1E-12 83.8 7.4 107 7-133 152-268 (460)
63 3ggo_A Prephenate dehydrogenas 98.5 1.7E-06 5.9E-11 74.1 12.7 95 6-103 113-220 (314)
64 3gt0_A Pyrroline-5-carboxylate 98.5 1.6E-06 5.5E-11 71.4 11.6 129 6-141 82-214 (247)
65 2g5c_A Prephenate dehydrogenas 98.3 2.9E-06 1E-10 70.9 10.6 112 7-125 82-206 (281)
66 1f0y_A HCDH, L-3-hydroxyacyl-C 98.3 1.3E-06 4.4E-11 74.1 8.5 108 7-134 122-239 (302)
67 2pv7_A T-protein [includes: ch 98.3 5.8E-06 2E-10 70.0 12.1 118 7-131 85-205 (298)
68 1wdk_A Fatty oxidation complex 98.3 1.1E-06 3.7E-11 83.3 7.7 105 7-132 415-529 (715)
69 2wtb_A MFP2, fatty acid multif 98.3 9.4E-07 3.2E-11 83.8 6.5 105 7-132 413-527 (725)
70 3b1f_A Putative prephenate deh 98.2 4.2E-06 1.4E-10 70.2 7.8 82 7-88 86-181 (290)
71 1zcj_A Peroxisomal bifunctiona 98.2 4.7E-06 1.6E-10 75.1 8.4 106 7-132 136-250 (463)
72 4e12_A Diketoreductase; oxidor 98.2 1.5E-05 5.3E-10 66.9 11.1 113 7-135 107-226 (283)
73 2dc1_A L-aspartate dehydrogena 98.2 3.4E-08 1.1E-12 81.1 -5.4 97 8-108 68-170 (236)
74 2raf_A Putative dinucleotide-b 98.1 8.1E-07 2.8E-11 71.6 2.8 93 8-103 78-191 (209)
75 2p4q_A 6-phosphogluconate dehy 98.1 8.6E-05 2.9E-09 67.4 16.1 144 68-219 290-458 (497)
76 2zyd_A 6-phosphogluconate dehy 98.1 7.3E-05 2.5E-09 67.6 14.3 142 69-218 296-460 (480)
77 2iz1_A 6-phosphogluconate dehy 98.1 8.4E-05 2.9E-09 67.0 14.5 143 68-218 287-452 (474)
78 3tri_A Pyrroline-5-carboxylate 98.0 2.9E-05 1E-09 65.2 9.5 171 11-201 88-269 (280)
79 2pgd_A 6-phosphogluconate dehy 97.8 0.00026 8.8E-09 64.0 13.4 129 68-200 283-435 (482)
80 2vns_A Metalloreductase steap3 97.7 7.5E-06 2.6E-10 66.1 1.2 91 13-103 107-209 (215)
81 3ktd_A Prephenate dehydrogenas 97.7 6.5E-05 2.2E-09 65.1 6.6 90 12-103 92-202 (341)
82 2i99_A MU-crystallin homolog; 97.6 9.8E-08 3.4E-12 81.7 -12.2 75 9-84 214-297 (312)
83 3dfu_A Uncharacterized protein 97.4 0.0011 3.7E-08 54.3 9.7 73 6-89 60-134 (232)
84 4gwg_A 6-phosphogluconate dehy 96.9 0.017 5.8E-07 52.1 13.8 120 91-218 317-451 (484)
85 4huj_A Uncharacterized protein 96.8 0.0005 1.7E-08 55.4 2.3 82 12-95 104-205 (220)
86 3hn2_A 2-dehydropantoate 2-red 96.2 0.1 3.5E-06 43.8 13.1 180 7-202 89-307 (312)
87 3hwr_A 2-dehydropantoate 2-red 96.1 0.14 4.7E-06 43.2 13.6 174 7-197 106-311 (318)
88 3i83_A 2-dehydropantoate 2-red 96.1 0.15 5E-06 43.0 13.6 172 7-196 91-300 (320)
89 3ghy_A Ketopantoate reductase 95.5 0.091 3.1E-06 44.6 10.0 119 66-199 175-322 (335)
90 1np3_A Ketol-acid reductoisome 92.3 0.3 1E-05 41.6 6.8 117 6-127 92-223 (338)
91 3g17_A Similar to 2-dehydropan 91.0 2.9 9.9E-05 34.4 11.5 121 65-199 137-285 (294)
92 1pgj_A 6PGDH, 6-PGDH, 6-phosph 88.6 3.8 0.00013 36.5 10.9 105 92-200 323-441 (478)
93 2rir_A Dipicolinate synthase, 86.3 0.12 4.2E-06 43.2 -0.3 63 7-81 232-295 (300)
94 3gvx_A Glycerate dehydrogenase 84.1 0.71 2.4E-05 38.6 3.4 47 6-52 194-240 (290)
95 2egg_A AROE, shikimate 5-dehyd 77.0 1 3.5E-05 37.6 2.0 35 9-45 228-262 (297)
96 1y81_A Conserved hypothetical 72.5 2 6.9E-05 31.5 2.4 30 11-44 92-121 (138)
97 2d5c_A AROE, shikimate 5-dehyd 72.0 1.9 6.4E-05 35.0 2.3 36 8-45 193-228 (263)
98 3phh_A Shikimate dehydrogenase 69.0 1.2 3.9E-05 37.0 0.4 37 6-45 194-230 (269)
99 3hg7_A D-isomer specific 2-hyd 68.4 2.7 9.3E-05 35.6 2.6 40 6-45 215-256 (324)
100 2f46_A Hypothetical protein; s 67.1 28 0.00096 25.4 7.9 60 15-87 44-110 (156)
101 1x7d_A Ornithine cyclodeaminas 66.7 0.79 2.7E-05 39.3 -1.1 37 9-46 214-250 (350)
102 2oz8_A MLL7089 protein; struct 66.3 25 0.00085 30.1 8.4 72 15-87 192-273 (389)
103 4e5n_A Thermostable phosphite 65.3 5.2 0.00018 33.8 3.8 40 6-45 221-262 (330)
104 3evt_A Phosphoglycerate dehydr 63.0 4.3 0.00015 34.3 2.8 45 6-50 212-256 (324)
105 3don_A Shikimate dehydrogenase 62.3 3.3 0.00011 34.3 1.9 35 9-45 198-232 (277)
106 1qp8_A Formate dehydrogenase; 60.6 4.1 0.00014 34.0 2.2 37 6-42 195-231 (303)
107 2gcg_A Glyoxylate reductase/hy 60.6 12 0.00041 31.4 5.2 36 6-41 231-266 (330)
108 2pi1_A D-lactate dehydrogenase 60.4 3 0.0001 35.4 1.4 45 6-50 215-259 (334)
109 2ovl_A Putative racemase; stru 60.0 42 0.0014 28.4 8.6 68 14-81 192-265 (371)
110 1mx3_A CTBP1, C-terminal bindi 59.9 4.7 0.00016 34.4 2.5 37 6-42 244-280 (347)
111 3stp_A Galactonate dehydratase 59.5 52 0.0018 28.5 9.3 65 15-79 232-302 (412)
112 1sc6_A PGDH, D-3-phosphoglycer 59.4 4 0.00014 35.6 2.0 39 6-44 218-258 (404)
113 2duw_A Putative COA-binding pr 58.2 4.2 0.00014 30.0 1.7 28 12-43 94-121 (145)
114 1ygy_A PGDH, D-3-phosphoglycer 58.2 10 0.00036 34.1 4.6 77 6-82 217-306 (529)
115 3oet_A Erythronate-4-phosphate 57.4 5.8 0.0002 34.4 2.7 45 6-50 195-239 (381)
116 1rvk_A Isomerase/lactonizing e 57.0 48 0.0016 28.0 8.5 65 15-79 202-273 (382)
117 1mdl_A Mandelate racemase; iso 56.6 54 0.0019 27.4 8.7 67 15-81 191-263 (359)
118 3c7a_A Octopine dehydrogenase; 56.2 46 0.0016 28.2 8.3 32 167-202 335-366 (404)
119 2o4c_A Erythronate-4-phosphate 55.7 4.2 0.00014 35.3 1.5 40 6-45 192-233 (380)
120 2g76_A 3-PGDH, D-3-phosphoglyc 53.7 5.5 0.00019 33.8 1.9 39 6-44 240-280 (335)
121 1wwk_A Phosphoglycerate dehydr 52.8 12 0.00041 31.2 3.8 40 6-45 217-258 (307)
122 2ekl_A D-3-phosphoglycerate de 52.6 4.9 0.00017 33.7 1.4 40 6-45 217-258 (313)
123 2dbq_A Glyoxylate reductase; D 52.5 7.4 0.00025 32.8 2.5 37 6-42 225-261 (334)
124 1xdw_A NAD+-dependent (R)-2-hy 52.4 4.8 0.00017 34.0 1.4 40 6-45 219-260 (331)
125 1dxy_A D-2-hydroxyisocaproate 52.1 5 0.00017 33.9 1.4 40 6-45 218-259 (333)
126 3jtm_A Formate dehydrogenase, 52.1 5.2 0.00018 34.2 1.5 40 6-45 241-282 (351)
127 3ozy_A Putative mandelate race 51.8 70 0.0024 27.3 8.8 67 15-81 197-270 (389)
128 2og9_A Mandelate racemase/muco 51.6 48 0.0017 28.3 7.7 65 15-79 209-279 (393)
129 3ugv_A Enolase; enzyme functio 50.5 76 0.0026 27.1 8.8 65 15-79 221-291 (390)
130 2hk9_A Shikimate dehydrogenase 50.5 8.2 0.00028 31.4 2.4 33 9-45 209-241 (275)
131 3toy_A Mandelate racemase/muco 50.1 1.1E+02 0.0037 26.0 9.7 65 15-79 215-285 (383)
132 2qgy_A Enolase from the enviro 49.4 55 0.0019 27.9 7.7 67 14-80 195-267 (391)
133 2qde_A Mandelate racemase/muco 48.7 79 0.0027 26.9 8.6 66 14-79 190-261 (397)
134 2ox4_A Putative mandelate race 48.6 87 0.003 26.7 8.8 65 15-79 211-281 (403)
135 1omo_A Alanine dehydrogenase; 48.5 2.7 9.2E-05 35.4 -0.9 37 9-46 205-241 (322)
136 3gg9_A D-3-phosphoglycerate de 48.5 8.6 0.00029 32.9 2.3 40 6-45 236-277 (352)
137 2yq5_A D-isomer specific 2-hyd 48.0 12 0.00041 31.9 3.1 40 6-45 221-262 (343)
138 3pp8_A Glyoxylate/hydroxypyruv 47.3 7.3 0.00025 32.7 1.6 40 6-45 214-255 (315)
139 1tzz_A Hypothetical protein L1 47.1 87 0.003 26.6 8.6 65 15-79 212-282 (392)
140 3r4e_A Mandelate racemase/muco 47.0 72 0.0025 27.6 8.1 65 15-79 222-292 (418)
141 3i4k_A Muconate lactonizing en 46.6 1.1E+02 0.0038 25.9 9.2 66 15-80 196-267 (383)
142 3mkc_A Racemase; metabolic pro 45.8 79 0.0027 27.0 8.1 65 15-79 207-278 (394)
143 3sjn_A Mandelate racemase/muco 44.7 88 0.003 26.5 8.2 67 15-81 195-268 (374)
144 2rdx_A Mandelate racemase/muco 44.2 1.3E+02 0.0045 25.3 9.3 65 15-81 191-260 (379)
145 2o56_A Putative mandelate race 44.2 89 0.0031 26.6 8.2 65 15-79 217-287 (407)
146 2pp0_A L-talarate/galactarate 44.0 74 0.0025 27.2 7.7 66 14-79 221-292 (398)
147 2pgw_A Muconate cycloisomerase 43.9 1.1E+02 0.0036 25.9 8.6 65 15-79 192-262 (384)
148 4hy3_A Phosphoglycerate oxidor 43.6 10 0.00036 32.5 2.1 36 6-41 251-286 (365)
149 3k5p_A D-3-phosphoglycerate de 43.5 12 0.00042 32.8 2.5 39 6-44 229-269 (416)
150 3tcs_A Racemase, putative; PSI 43.3 1.1E+02 0.0037 26.2 8.6 65 15-79 201-271 (388)
151 2z2v_A Hypothetical protein PH 42.9 4.2 0.00014 34.9 -0.5 32 12-45 76-107 (365)
152 1gdh_A D-glycerate dehydrogena 42.2 8.9 0.0003 32.2 1.4 36 6-41 223-258 (320)
153 2cuk_A Glycerate dehydrogenase 42.2 13 0.00046 30.9 2.5 39 6-45 214-254 (311)
154 4dgs_A Dehydrogenase; structur 42.0 18 0.00063 30.6 3.4 40 6-45 243-284 (340)
155 2hzg_A Mandelate racemase/muco 41.9 84 0.0029 26.8 7.7 68 14-81 194-270 (401)
156 2gl5_A Putative dehydratase pr 41.8 81 0.0028 26.9 7.6 65 15-79 220-290 (410)
157 1j4a_A D-LDH, D-lactate dehydr 41.7 8.6 0.00029 32.4 1.2 40 6-45 220-261 (333)
158 4dxk_A Mandelate racemase / mu 41.7 1E+02 0.0036 26.3 8.3 65 15-79 212-282 (400)
159 2nql_A AGR_PAT_674P, isomerase 41.6 81 0.0028 26.7 7.5 95 15-123 210-311 (388)
160 3jva_A Dipeptide epimerase; en 41.4 50 0.0017 27.8 6.1 97 15-124 185-288 (354)
161 2w2k_A D-mandelate dehydrogena 40.7 15 0.00051 31.2 2.6 36 6-41 241-276 (348)
162 3ddm_A Putative mandelate race 40.4 1.7E+02 0.0058 24.9 10.1 67 15-81 201-274 (392)
163 3ba1_A HPPR, hydroxyphenylpyru 40.2 17 0.00058 30.7 2.9 40 6-45 236-277 (333)
164 3q45_A Mandelate racemase/muco 40.0 94 0.0032 26.2 7.6 67 15-81 186-258 (368)
165 3ego_A Probable 2-dehydropanto 39.8 65 0.0022 26.3 6.4 28 166-197 265-292 (307)
166 2j6i_A Formate dehydrogenase; 39.7 10 0.00035 32.5 1.4 40 6-45 242-283 (364)
167 2gdq_A YITF; mandelate racemas 38.3 90 0.0031 26.4 7.3 65 15-79 186-257 (382)
168 3rmj_A 2-isopropylmalate synth 38.1 62 0.0021 27.7 6.1 101 22-123 30-143 (370)
169 3r0u_A Enzyme of enolase super 37.0 1.2E+02 0.0043 25.6 7.9 65 15-79 188-260 (379)
170 2qq6_A Mandelate racemase/muco 36.7 2E+02 0.0067 24.5 10.4 65 15-79 212-282 (410)
171 1nu5_A Chloromuconate cycloiso 36.6 1.9E+02 0.0063 24.2 9.4 65 15-79 190-260 (370)
172 1npy_A Hypothetical shikimate 36.4 6.3 0.00022 32.3 -0.4 36 11-48 203-238 (271)
173 4dwd_A Mandelate racemase/muco 36.4 73 0.0025 27.3 6.4 66 15-80 193-264 (393)
174 2b0j_A 5,10-methenyltetrahydro 36.3 1.9E+02 0.0066 24.3 11.7 164 6-176 161-340 (358)
175 3v3w_A Starvation sensing prot 36.2 87 0.003 27.1 6.9 65 15-79 228-298 (424)
176 1eye_A DHPS 1, dihydropteroate 35.9 87 0.003 25.7 6.5 52 23-81 26-77 (280)
177 3qe9_Y Exonuclease 1; exonucle 35.7 52 0.0018 27.9 5.2 50 21-70 123-175 (352)
178 2ph5_A Homospermidine synthase 35.5 24 0.00082 31.5 3.1 37 9-47 79-115 (480)
179 2glx_A 1,5-anhydro-D-fructose 35.2 26 0.00089 28.8 3.2 54 29-82 76-142 (332)
180 3mqt_A Mandelate racemase/muco 35.2 71 0.0024 27.3 6.1 65 15-79 202-273 (394)
181 3tj4_A Mandelate racemase; eno 35.1 2E+02 0.0069 24.1 9.6 67 15-81 199-271 (372)
182 3rcy_A Mandelate racemase/muco 35.0 1E+02 0.0035 26.7 7.2 65 15-79 205-275 (433)
183 1chr_A Chloromuconate cycloiso 34.7 1.4E+02 0.0049 25.0 7.9 70 10-79 184-260 (370)
184 1p9l_A Dihydrodipicolinate red 33.9 1.4E+02 0.0049 23.7 7.4 85 13-99 45-149 (245)
185 3glc_A Aldolase LSRF; TIM barr 33.5 2E+02 0.0069 23.6 8.9 99 24-133 187-292 (295)
186 4dye_A Isomerase; enolase fami 33.4 1.4E+02 0.0048 25.5 7.7 65 14-79 213-282 (398)
187 3sbf_A Mandelate racemase / mu 33.4 81 0.0028 27.0 6.2 65 15-79 203-273 (401)
188 3ik4_A Mandelate racemase/muco 33.1 1.9E+02 0.0064 24.3 8.4 70 10-79 184-261 (365)
189 2nac_A NAD-dependent formate d 33.0 14 0.00048 32.0 1.2 36 6-41 268-303 (393)
190 4e4f_A Mannonate dehydratase; 32.9 1.4E+02 0.0049 25.7 7.8 65 15-79 230-300 (426)
191 1nvt_A Shikimate 5'-dehydrogen 32.7 18 0.0006 29.5 1.7 34 9-44 218-251 (287)
192 1uxc_A FRUR (1-57), fructose r 32.7 43 0.0015 20.9 3.2 21 115-135 5-25 (65)
193 3i6e_A Muconate cycloisomerase 32.6 1.6E+02 0.0053 25.0 7.9 65 15-79 194-264 (385)
194 3c1a_A Putative oxidoreductase 32.5 34 0.0012 28.0 3.5 66 15-82 71-147 (315)
195 3eez_A Putative mandelate race 32.5 2.2E+02 0.0074 24.0 8.7 64 15-80 191-259 (378)
196 3p04_A Uncharacterized BCR; SE 32.0 34 0.0012 23.1 2.8 31 6-36 20-51 (87)
197 1tkk_A Similar to chloromucona 31.9 2.2E+02 0.0076 23.6 9.7 66 15-80 187-260 (366)
198 3bjs_A Mandelate racemase/muco 31.8 1.3E+02 0.0043 26.0 7.2 65 15-79 231-302 (428)
199 4g2n_A D-isomer specific 2-hyd 31.3 25 0.00085 29.9 2.5 40 6-45 248-289 (345)
200 1lc0_A Biliverdin reductase A; 30.9 43 0.0015 27.2 3.8 16 159-174 246-261 (294)
201 2xvc_A ESCRT-III, SSO0910; cel 30.7 33 0.0011 21.3 2.3 21 113-133 28-48 (59)
202 3ewb_X 2-isopropylmalate synth 30.6 1.4E+02 0.0047 24.5 6.9 102 21-123 22-136 (293)
203 3m0m_A L-rhamnose isomerase; b 30.6 1.4E+02 0.0047 26.2 7.2 77 98-174 14-93 (438)
204 3v7e_A Ribosome-associated pro 30.3 61 0.0021 21.1 3.8 44 3-46 15-60 (82)
205 1tlt_A Putative oxidoreductase 30.0 49 0.0017 27.0 4.1 22 30-51 80-102 (319)
206 2d0i_A Dehydrogenase; structur 29.3 33 0.0011 28.7 2.9 36 6-42 221-256 (333)
207 1aj0_A DHPS, dihydropteroate s 29.2 81 0.0028 25.9 5.2 52 23-81 35-86 (282)
208 3v7q_A Probable ribosomal prot 28.8 57 0.0019 22.2 3.6 43 3-45 23-67 (101)
209 2ho3_A Oxidoreductase, GFO/IDH 28.5 66 0.0023 26.2 4.7 11 69-79 127-137 (325)
210 4e5t_A Mandelate racemase / mu 28.4 73 0.0025 27.4 5.0 65 15-79 210-280 (404)
211 3rr1_A GALD, putative D-galact 28.4 62 0.0021 27.9 4.6 66 15-80 180-251 (405)
212 3on1_A BH2414 protein; structu 28.3 51 0.0017 22.4 3.3 43 3-45 22-66 (101)
213 3my9_A Muconate cycloisomerase 28.3 1.9E+02 0.0064 24.4 7.6 65 15-79 193-263 (377)
214 2zad_A Muconate cycloisomerase 28.0 2.5E+02 0.0086 23.1 9.2 95 15-123 184-287 (345)
215 3t6c_A RSPA, putative MAND fam 27.9 96 0.0033 27.0 5.8 65 15-79 242-312 (440)
216 2hxt_A L-fuconate dehydratase; 27.9 1.4E+02 0.0049 25.7 6.9 67 15-81 244-317 (441)
217 3hdj_A Probable ornithine cycl 27.8 10 0.00035 31.7 -0.6 35 9-44 201-236 (313)
218 2y5s_A DHPS, dihydropteroate s 27.6 93 0.0032 25.7 5.3 52 23-81 43-94 (294)
219 2guk_A Hypothetical protein PG 27.6 97 0.0033 22.1 4.6 50 21-77 33-82 (120)
220 4e4u_A Mandalate racemase/muco 27.0 83 0.0029 27.1 5.2 65 15-79 203-273 (412)
221 3d4o_A Dipicolinate synthase s 26.7 25 0.00087 28.6 1.7 41 7-50 230-270 (293)
222 3tji_A Mandelate racemase/muco 26.5 77 0.0026 27.5 4.8 65 15-79 224-294 (422)
223 2qip_A Protein of unknown func 26.4 1.9E+02 0.0065 21.1 6.5 64 26-90 61-143 (165)
224 3vcn_A Mannonate dehydratase; 26.3 68 0.0023 27.8 4.4 65 15-79 229-299 (425)
225 2poz_A Putative dehydratase; o 26.0 1E+02 0.0035 26.1 5.5 65 15-79 201-271 (392)
226 2ftc_I Mitochondrial ribosomal 25.9 56 0.0019 23.3 3.2 34 4-37 77-111 (118)
227 3dgb_A Muconate cycloisomerase 25.8 1.8E+02 0.0063 24.5 7.1 65 15-79 196-266 (382)
228 3dip_A Enolase; structural gen 25.2 87 0.003 27.0 4.9 65 15-79 215-286 (410)
229 2ps2_A Putative mandelate race 25.1 2E+02 0.0069 23.9 7.2 64 15-80 192-261 (371)
230 1tx2_A DHPS, dihydropteroate s 24.8 80 0.0027 26.2 4.4 50 24-80 61-110 (297)
231 1ccw_A Protein (glutamate muta 24.8 1.2E+02 0.0043 21.5 5.1 33 58-90 85-123 (137)
232 3o8q_A Shikimate 5-dehydrogena 24.7 15 0.00051 30.2 -0.1 32 11-44 211-243 (281)
233 3bbo_O Ribosomal protein L16; 24.5 58 0.002 23.8 3.1 34 4-37 90-123 (135)
234 3r8s_M 50S ribosomal protein L 24.4 55 0.0019 23.9 3.0 34 5-38 90-123 (136)
235 3jx9_A Putative phosphoheptose 24.3 54 0.0018 24.9 3.0 35 10-44 74-109 (170)
236 2yci_X 5-methyltetrahydrofolat 23.9 1.1E+02 0.0038 24.8 5.1 25 24-48 32-56 (271)
237 1r0m_A N-acylamino acid racema 23.7 2.9E+02 0.0099 23.0 7.9 67 14-81 190-262 (375)
238 2zc8_A N-acylamino acid racema 23.6 1.8E+02 0.006 24.3 6.5 96 14-123 183-285 (369)
239 2l8n_A Transcriptional repress 23.5 63 0.0021 20.3 2.8 28 114-141 13-40 (67)
240 3dg3_A Muconate cycloisomerase 23.5 96 0.0033 26.1 4.8 65 15-79 187-257 (367)
241 1xea_A Oxidoreductase, GFO/IDH 22.9 79 0.0027 25.8 4.1 66 15-82 65-143 (323)
242 4hb7_A Dihydropteroate synthas 22.9 2.3E+02 0.0077 23.2 6.7 53 23-82 27-79 (270)
243 3hgj_A Chromate reductase; TIM 22.8 3.3E+02 0.011 22.6 8.3 38 10-47 215-260 (349)
244 4hpn_A Putative uncharacterize 22.8 3E+02 0.01 22.9 7.9 67 14-80 189-261 (378)
245 3abi_A Putative uncharacterize 22.6 60 0.002 27.2 3.3 39 6-46 70-108 (365)
246 3ic5_A Putative saccharopine d 22.5 90 0.0031 20.5 3.7 31 12-44 68-98 (118)
247 3pwz_A Shikimate dehydrogenase 22.5 32 0.0011 28.0 1.5 29 11-41 205-233 (272)
248 3s5s_A Mandelate racemase/muco 22.2 3.5E+02 0.012 22.8 8.2 40 10-49 185-227 (389)
249 1dih_A Dihydrodipicolinate red 22.1 1.2E+02 0.0042 24.4 5.0 31 12-44 71-101 (273)
250 1rxw_A Flap structure-specific 21.8 1E+02 0.0034 25.8 4.5 51 20-70 123-176 (336)
251 1nyt_A Shikimate 5-dehydrogena 21.7 43 0.0015 26.9 2.1 31 11-43 204-235 (271)
252 1p77_A Shikimate 5-dehydrogena 21.6 28 0.00097 28.1 1.0 10 13-22 206-215 (272)
253 3ado_A Lambda-crystallin; L-gu 21.6 2.8E+02 0.0095 23.0 7.2 69 58-135 154-228 (319)
254 1sjd_A N-acylamino acid racema 21.2 2.4E+02 0.0082 23.4 6.9 64 15-79 185-254 (368)
255 2p8b_A Mandelate racemase/muco 21.1 1.7E+02 0.0057 24.4 5.9 66 15-80 187-259 (369)
256 3e5d_A Putative glyoxalase I; 20.5 1.1E+02 0.0038 20.1 3.9 35 14-48 71-105 (127)
257 1z0s_A Probable inorganic poly 20.5 1.9E+02 0.0064 23.6 5.8 58 16-77 32-89 (278)
No 1
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=100.00 E-value=1.4e-54 Score=373.51 Aligned_cols=214 Identities=28% Similarity=0.526 Sum_probs=206.3
Q ss_pred CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
+|++|+++++++|++||||||++|+++++++++++++|++||||||+|||.+|++|+|++|+||++++|++++|+|++||
T Consensus 78 ~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g 157 (300)
T 3obb_A 78 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMG 157 (300)
T ss_dssp HSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHE
T ss_pred hchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-------hhccccC
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-------RMIEKDF 153 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~ 153 (220)
+ ++|+|++|+|+.+||+||++.++++++++|++.++++.|+|+++++++++.+++.|+.++.+.| .+..++|
T Consensus 158 ~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~ 237 (300)
T 3obb_A 158 RNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDY 237 (300)
T ss_dssp EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTT
T ss_pred CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccC
Confidence 9 9999999999999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 154 RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 154 ~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
+++|+++++.||++++++++++. |+|+|+.+.++++|+++.++|+|++|+++|+++|++.+|
T Consensus 238 ~~~f~~~l~~KDl~l~~~~A~~~----g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~~~G 299 (300)
T 3obb_A 238 SGGFMAQLMAKDLGLAQEAAQAS----ASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (300)
T ss_dssp CSSSBHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred CccchHHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHhcC
Confidence 99999999999999999999999 999999999999999999999999999999999999877
No 2
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=100.00 E-value=6.2e-51 Score=350.25 Aligned_cols=211 Identities=17% Similarity=0.239 Sum_probs=205.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
.+++.+.+|++|||+||++|++++++++++.++|++|+||||+|++..+++|++++|+||++++|++++|+|+++++ ++
T Consensus 82 ~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~ 161 (297)
T 4gbj_A 82 ELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVF 161 (297)
T ss_dssp HHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred HHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeE
Confidence 36778899999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCC-CchhhHH
Q 044696 85 FMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP-GGFAEYM 162 (220)
Q Consensus 85 ~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~f~~~~~ 162 (220)
|+|+ +|+|+.+||+||++.++++++++|++.+++++|||+++++++++.+++.||+++.+.|++.+++|.| +|+++++
T Consensus 162 ~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~ 241 (297)
T 4gbj_A 162 DFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLG 241 (297)
T ss_dssp ECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHH
T ss_pred EecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHH
Confidence 9995 8999999999999999999999999999999999999999999999999999999999999999987 8999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696 163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220 (220)
Q Consensus 163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~ 220 (220)
.||++++++++++. |+|+|+++.++++|+++.++|+|++||+++++.+++.+|+
T Consensus 242 ~KDl~l~~~~A~~~----g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~~aGl 295 (297)
T 4gbj_A 242 LKDINLTLQTASDV----NAPMPFADIIRNRFISGLAKGRENLDWGALALGASDDAGL 295 (297)
T ss_dssp HHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHHHTTC
T ss_pred HHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCC
Confidence 99999999999999 9999999999999999999999999999999999999985
No 3
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=100.00 E-value=7.3e-42 Score=296.28 Aligned_cols=211 Identities=34% Similarity=0.536 Sum_probs=203.9
Q ss_pred CccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696 3 DPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 3 g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~ 82 (220)
|+ ++++.+.+|++|||+||++|.+++++++.+.++|++|+|+||+|++..++.|++.+++||+++++++++|+|+.+ .
T Consensus 107 ~~-~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~ 184 (320)
T 4dll_A 107 AQ-GVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-G 184 (320)
T ss_dssp TT-CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-E
T ss_pred ch-hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-C
Confidence 44 788889999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhH
Q 044696 83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEY 161 (220)
Q Consensus 83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~ 161 (220)
++|+|++|.|+.+|+++|++...++.+++|++.++++.|+|+++++++++.+.+.||.++.+.|++.+++|.++|++++
T Consensus 185 ~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~ 264 (320)
T 4dll_A 185 RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSI 264 (320)
T ss_dssp EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHH
T ss_pred CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHH
Confidence 9999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 162 MVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 162 ~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
+.||++++++++++. |+++|+.+.+.++|+++.+.|+|++|++++++++++.+|
T Consensus 265 ~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 318 (320)
T 4dll_A 265 QLKDMRNALATAQEI----GFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG 318 (320)
T ss_dssp HHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhcC
Confidence 999999999999999 999999999999999999999999999999999998776
No 4
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-41 Score=293.64 Aligned_cols=212 Identities=27% Similarity=0.434 Sum_probs=206.4
Q ss_pred CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
||++++++.+++|++|||+||++|.+++++++.+.++|++|+|+||+|++..+..|++++++||+++++++++|+|+.++
T Consensus 96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g 175 (310)
T 3doj_A 96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLG 175 (310)
T ss_dssp HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHE
T ss_pred hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhC
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE 160 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~ 160 (220)
. ++++|++|.|+.+|+++|++...++.+++|++.++++.|+|++++.++++.+...|++++.+.|++.+++|.++|+++
T Consensus 176 ~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~ 255 (310)
T 3doj_A 176 KRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLK 255 (310)
T ss_dssp EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHH
T ss_pred CCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHH
Confidence 9 999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696 161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217 (220)
Q Consensus 161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~ 217 (220)
++.||++++++++++. |+++|+.+.+.++|+++.++|+|++|++++++++++.
T Consensus 256 ~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~ 308 (310)
T 3doj_A 256 HQQKDMRLALALGDEN----AVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFS 308 (310)
T ss_dssp HHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHCC
T ss_pred HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHhc
Confidence 9999999999999999 9999999999999999999999999999999999864
No 5
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=100.00 E-value=5.5e-41 Score=286.12 Aligned_cols=210 Identities=25% Similarity=0.395 Sum_probs=204.2
Q ss_pred CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
||++++.+.+++|++|||+||++|.+++++++.+.++|++|+|+||+|++..++.|++++++||+++++++++++|+.++
T Consensus 76 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g 155 (287)
T 3pdu_A 76 FGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALG 155 (287)
T ss_dssp HSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHE
T ss_pred cCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE 160 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~ 160 (220)
. ++|+|++|.|+.+|+++|.+...++.+++|++.++++.|+|++++.++++.+...||+++.+.|++.+++|.++|+++
T Consensus 156 ~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T 3pdu_A 156 KKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLK 235 (287)
T ss_dssp EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHH
T ss_pred CCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHH
Confidence 9 999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696 161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215 (220)
Q Consensus 161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~ 215 (220)
++.||++++++++++. |+++|+.+.+.++|+++.+.|+|++|+++++++++
T Consensus 236 ~~~kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pdu_A 236 HMQKDLRLAVELGDRL----GQPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286 (287)
T ss_dssp HHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence 9999999999999999 99999999999999999999999999999999875
No 6
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=8e-41 Score=287.42 Aligned_cols=213 Identities=24% Similarity=0.422 Sum_probs=202.4
Q ss_pred CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
||++++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|++..+..|++.+++||+++++++++++|+.++
T Consensus 83 ~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g 162 (303)
T 3g0o_A 83 FGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVA 162 (303)
T ss_dssp C--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHE
T ss_pred hChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHC
Confidence 57788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchh
Q 044696 82 K-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA 159 (220)
Q Consensus 82 ~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~ 159 (220)
. ++++|+ +|.|+.+|+++|++...++.+++|++.++++.|+|++++.++++.+.+.||.++++.|++.+++|+++|++
T Consensus 163 ~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 242 (303)
T 3g0o_A 163 SNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAV 242 (303)
T ss_dssp EEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBH
T ss_pred CCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCch
Confidence 9 999998 99999999999999999999999999999999999999999999988999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhc
Q 044696 160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218 (220)
Q Consensus 160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~ 218 (220)
+++.||++++++++++. |+++|+.+.+.++|+++.+.|+|++|+++++++++++.
T Consensus 243 ~~~~kD~~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~ 297 (303)
T 3g0o_A 243 DIFVKDLGLVADTAKAL----RFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGEG 297 (303)
T ss_dssp HHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC----
T ss_pred HHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhcc
Confidence 99999999999999999 99999999999999999999999999999999988753
No 7
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=100.00 E-value=5.4e-41 Score=286.15 Aligned_cols=210 Identities=28% Similarity=0.416 Sum_probs=204.0
Q ss_pred CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
||++++.+.+++|++|||+||++|.+++++.+.+.++|++|+|+||+|++..+..|++.+++||+++++++++++|+.++
T Consensus 76 ~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g 155 (287)
T 3pef_A 76 FGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMG 155 (287)
T ss_dssp HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHE
T ss_pred cCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE 160 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~ 160 (220)
. ++++|++|.++.+|+++|++...++.+++|++.++++.|+|++++.+++..+...||+++.+.+++.+++|.++|+++
T Consensus 156 ~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 235 (287)
T 3pef_A 156 KKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLK 235 (287)
T ss_dssp EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHH
T ss_pred CCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchH
Confidence 9 999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696 161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215 (220)
Q Consensus 161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~ 215 (220)
++.||++++++++++. |+++|+.+.+.++|+++.++|+|++|+++++++++
T Consensus 236 ~~~kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~ 286 (287)
T 3pef_A 236 HMQKDLRLAVALGDRV----GQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE 286 (287)
T ss_dssp HHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence 9999999999999999 99999999999999999999999999999998765
No 8
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=100.00 E-value=5.7e-39 Score=275.19 Aligned_cols=213 Identities=27% Similarity=0.522 Sum_probs=205.5
Q ss_pred CccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696 3 DPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 3 g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~ 82 (220)
+++++.+.++++++|||+||+.|.+++++++.+.++|++|+|+||++++..+..+++++++||+++++++++++|+.++.
T Consensus 79 ~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~g~l~~~~~g~~~~~~~~~~ll~~~g~ 158 (302)
T 2h78_A 79 DDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGR 158 (302)
T ss_dssp SSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEE
T ss_pred CchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEEEEccCChhhHhcCCceEEeCCCHHHHHHHHHHHHHhCC
Confidence 45688889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-------hhccccCC
Q 044696 83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-------RMIEKDFR 154 (220)
Q Consensus 83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~ 154 (220)
++++|+.|.++.+|+++|++...++..+.|++.++++.|+|++++.++++.+.+.++.++.+.| ++.+++|.
T Consensus 159 ~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~~ 238 (302)
T 2h78_A 159 NIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYS 238 (302)
T ss_dssp EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTTC
T ss_pred CeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhCCCcccccccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999899999999999 99999999
Q ss_pred CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 155 PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 155 ~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
++|+++++.||++++++++++. |+++|+.+.+.++|+++.+.|+|++||+++++++++.+|
T Consensus 239 ~g~~~~~~~kD~~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~ 299 (302)
T 2h78_A 239 GGFMAQLMAKDLGLAQEAAQAS----ASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG 299 (302)
T ss_dssp SSSBHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred CCCcHHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999 999999999999999999999999999999999998765
No 9
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=100.00 E-value=1e-38 Score=274.96 Aligned_cols=203 Identities=15% Similarity=0.078 Sum_probs=189.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
++ ..+.+|++|||+||++|..++++++.++++|++|+|+||+|+|+.+..+++++++||+++++++++|+|+.++. ++
T Consensus 87 ~l-~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~~~ 165 (306)
T 3l6d_A 87 GV-ARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGHTV 165 (306)
T ss_dssp TH-HHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred ch-hhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCCEE
Confidence 44 44579999999999999999999999999999999999999999999999999999999999999999999988 99
Q ss_pred ec--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC--CChHHHHhhhhhhccccCCCC-ch
Q 044696 85 FM--GG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA--AGSMAMELYGERMIEKDFRPG-GF 158 (220)
Q Consensus 85 ~~--G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~~-f~ 158 (220)
|+ |+ +|+|+.+| .+.++++++++|++.++++.|+|+++++++++.+. +.||+++.+.|++.+++|+|+ |+
T Consensus 166 ~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 241 (306)
T 3l6d_A 166 FLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQAR 241 (306)
T ss_dssp ECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSB
T ss_pred EecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCccc
Confidence 99 97 89999999 45568899999999999999999999999999875 689999999999999999985 79
Q ss_pred hhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696 159 AEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217 (220)
Q Consensus 159 ~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~ 217 (220)
++++.||++++++++++. |+++|++++++++|+++.+.|+|++|++++++++++.
T Consensus 242 ~~~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~ 296 (306)
T 3l6d_A 242 LDVHADAFAHIAQSLHAQ----GVWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFARE 296 (306)
T ss_dssp HHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC--
T ss_pred HHHHHHHHHHHHHHHHHc----CCCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhH
Confidence 999999999999999999 9999999999999999999999999999999988765
No 10
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=100.00 E-value=2.6e-36 Score=258.70 Aligned_cols=193 Identities=25% Similarity=0.325 Sum_probs=182.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|++..++.|++.+++||+++++++++|+|+.++. ++
T Consensus 90 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~ 169 (296)
T 3qha_A 90 ELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVVI 169 (296)
T ss_dssp HHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEEE
T ss_pred HHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCeE
Confidence 56778899999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHhccCCChHHHHhhhhhhccccCCCCch
Q 044696 85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKW------RDAVKGGAAGSMAMELYGERMIEKDFRPGGF 158 (220)
Q Consensus 85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~------~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~ 158 (220)
|+|++|.|+.+|+++|.+...++.+++|++.++++.|+|++++ ++++..+.+.|+..+ .+++.++ |.|+|+
T Consensus 170 ~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~-~~~~f~ 246 (296)
T 3qha_A 170 HAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD--NMKDLEP-DNFLYQ 246 (296)
T ss_dssp EEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS--SCSCCCT-TSTTHH
T ss_pred EcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh--chhhhhc-CCCCCc
Confidence 9999999999999999999999999999999999999999999 999998888785544 8888888 889999
Q ss_pred h-----hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCC
Q 044696 159 A-----EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKF 205 (220)
Q Consensus 159 ~-----~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~ 205 (220)
+ +++.||++++++++++. |+|+|+++.++++|+.+.+.||+++
T Consensus 247 ~~~~~~~~~~KD~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~ 294 (296)
T 3qha_A 247 PFLHTRGLGEKDLSLALALGEAV----SVDLPLARLAYEGLAAGLGVPHKEK 294 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTCCC---
T ss_pred hhhhhhHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCcccc
Confidence 9 99999999999999999 9999999999999999999999654
No 11
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=100.00 E-value=8.9e-34 Score=242.04 Aligned_cols=213 Identities=29% Similarity=0.491 Sum_probs=201.7
Q ss_pred ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696 4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK- 82 (220)
Q Consensus 4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~- 82 (220)
++++.+.+++|++||++||..|.+.+++.+.+.++|++|+++|++++++.+..+++.+++||+++.+++++++|+.++.
T Consensus 82 ~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~ 161 (299)
T 1vpd_A 82 ENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGS 161 (299)
T ss_dssp TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEE
T ss_pred cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 3567788899999999999999999999999998999999999999999999999999999999999999999999999
Q ss_pred ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHH
Q 044696 83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYM 162 (220)
Q Consensus 83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~ 162 (220)
++++++.|.+..+|+++|.+....+.++.|++.++++.|++++++.+++..+...++.+..+.|.+.+++|.++|+++.+
T Consensus 162 ~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~ 241 (299)
T 1vpd_A 162 VVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLH 241 (299)
T ss_dssp EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHH
T ss_pred eEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHH
Confidence 99999999999999999999999999999999999999999999999999887778888888899999999889999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696 163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220 (220)
Q Consensus 163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~ 220 (220)
.||++.+++.+++. |+++|+.+.+.++|+++.+.|+|++||+++++++++.+|.
T Consensus 242 ~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~ 295 (299)
T 1vpd_A 242 IKDLANALDTSHGV----GAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKV 295 (299)
T ss_dssp HHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCC
Confidence 99999999999999 9999999999999999999999999999999999987663
No 12
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-34 Score=250.61 Aligned_cols=199 Identities=21% Similarity=0.226 Sum_probs=181.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|+ ..+..+++++++||+++ ++++|+|+.++. ++
T Consensus 106 ~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ll~~~g~~v~ 182 (317)
T 4ezb_A 106 SAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA--VEVAERLNALGMNLE 182 (317)
T ss_dssp HHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC-STTTGGGSEEEEESTTH--HHHHHHHHTTTCEEE
T ss_pred HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC-chhhcCCEEEEEeCChH--HHHHHHHHHhCCCeE
Confidence 567788999999999999999999999999999999999999995 56778999999999998 999999999999 99
Q ss_pred ecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCchhhHH
Q 044696 85 FMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGGFAEYM 162 (220)
Q Consensus 85 ~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~ 162 (220)
|+|+ +|.|+.+|+++|.+..+++++++|++.++++.|+|++ +++.+..+. ..++ ..+.+++.+++|.++|+ +
T Consensus 183 ~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~g~~---~ 256 (317)
T 4ezb_A 183 AVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDW--RDVADYYLSRTFEHGAR---R 256 (317)
T ss_dssp EEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCH--HHHHHHHHHHHHHHHHH---H
T ss_pred EeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccH--HHhhhhhhcCCCCCCcc---h
Confidence 9998 9999999999999999999999999999999999995 677777654 3333 56789999999988887 4
Q ss_pred HHHHHHHHHHHhhcccCCCCCccHHHHHHHH----HHHHHHCCCC-CCChHHHHHHHHHh
Q 044696 163 VKDMGMGVDVVEESEDERVVVLPGAALGKQL----FSAMVANGDG-KFGTQGLVSVIERI 217 (220)
Q Consensus 163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~----~~~a~~~G~g-~~d~~av~~~~~~~ 217 (220)
.||++++++++++. |+++|+++.+.++ |+.+.+.|++ ++||+++++.+++.
T Consensus 257 ~KDl~~~~~~a~~~----g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~ 312 (317)
T 4ezb_A 257 VTEMTEAAETIESF----GLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVPVLARR 312 (317)
T ss_dssp HHHHHHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhh
Confidence 99999999999999 9999999999999 8888889997 99999999998765
No 13
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=100.00 E-value=8.1e-33 Score=236.31 Aligned_cols=211 Identities=33% Similarity=0.514 Sum_probs=200.3
Q ss_pred cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P 83 (220)
Q Consensus 5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~ 83 (220)
+++.+.+++|++||++||..|...+++.+.+.++|++|+++|+++++..+..|++.+++||+++.+++++++|+.++. +
T Consensus 82 ~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~ 161 (301)
T 3cky_A 82 GGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDI 161 (301)
T ss_dssp TCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred chHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCE
Confidence 467788899999999999999999999999998999999999999999999999999999999999999999999999 9
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchhhHH
Q 044696 84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFAEYM 162 (220)
Q Consensus 84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~ 162 (220)
+++|+.|.+..+|+++|.+....+..+.|++.++++.|++++++.+++..+...++.+..+.| .+.+++|+++|+++.+
T Consensus 162 ~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~ 241 (301)
T 3cky_A 162 YHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQ 241 (301)
T ss_dssp EEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHH
Confidence 999999999999999999999999999999999999999999999999988777888888888 8999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
.||++.+++.+++. |+++|+.+.+.++|+++.+.|+|++||+++++++++.+|
T Consensus 242 ~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~ 294 (301)
T 3cky_A 242 HKDLGLALEAGKEG----NVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294 (301)
T ss_dssp HHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcC
Confidence 99999999999999 999999999999999999999999999999999998765
No 14
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=100.00 E-value=1e-32 Score=234.91 Aligned_cols=211 Identities=37% Similarity=0.615 Sum_probs=199.6
Q ss_pred cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P 83 (220)
Q Consensus 5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~ 83 (220)
+++.+.+.+|++||++||..|...+++.+.+.++|++|+++|+++++..+..|.+.+++||+++.+++++++|+.++. +
T Consensus 80 ~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~ 159 (295)
T 1yb4_A 80 HGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNI 159 (295)
T ss_dssp TSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred hhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCE
Confidence 467778889999999999999999999999998999999999999999999999999999999999999999999999 9
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHH
Q 044696 84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMV 163 (220)
Q Consensus 84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~ 163 (220)
+++|+.|.+..+|+++|.+...++.++.|++.++++.|++++++.+++..+...++.+..+.+.+.+++|+++|++..+.
T Consensus 160 ~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~ 239 (295)
T 1yb4_A 160 TLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQ 239 (295)
T ss_dssp EEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHH
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHH
Confidence 99999999999999999999999999999999999999999999999998877788888778889999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 164 KDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 164 KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
||++++++.+++. |+++|+.+++.+.|+++.+.|+|++||+++++++++.++
T Consensus 240 kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~ 291 (295)
T 1yb4_A 240 KDLNLALQSAKAL----ALNLPNTATCQELFNTCAANGGSQLDHSAMVQALELMAN 291 (295)
T ss_dssp HHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcc
Confidence 9999999999999 999999999999999999999999999999999988765
No 15
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=100.00 E-value=3e-33 Score=241.45 Aligned_cols=187 Identities=17% Similarity=0.173 Sum_probs=174.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK- 82 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~- 82 (220)
++.+.+++|++|||+||+.|.+++++++.+.++ |++|+|+||+|++..+ .|++++++||+++ ++++++|+.++.
T Consensus 102 ~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~~~ll~~~g~~ 178 (312)
T 3qsg_A 102 QAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRFQAAFTLYGCR 178 (312)
T ss_dssp HHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHHHHHHHTTTCE
T ss_pred hhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCChH--HHHHHHHHHhCCC
Confidence 567788999999999999999999999999998 9999999999977654 7899999999998 999999999999
Q ss_pred ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhH
Q 044696 83 PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEY 161 (220)
Q Consensus 83 ~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~ 161 (220)
++|+|+ +|+|+.+|+++|++..+++.+++|++.++++.|+|+ ++++.++.+. .++.++.+.+++.+++|.++|++
T Consensus 179 ~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~~-- 254 (312)
T 3qsg_A 179 IEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEHHLRDLALYLVERNLEHADRR-- 254 (312)
T ss_dssp EEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGGTHHHHHHHHHHHHHHHHHHH--
T ss_pred eEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-CchhHHHhhhHhhcCCCCcccch--
Confidence 999998 899999999999999999999999999999999999 6889998765 46777888999999999988876
Q ss_pred HHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCC
Q 044696 162 MVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGK 204 (220)
Q Consensus 162 ~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~ 204 (220)
.||++++++++++. |+++|+++.+.++|+++.+.|+++
T Consensus 255 -~KDl~~~~~~a~~~----g~~~pl~~~~~~~~~~~~~~g~~~ 292 (312)
T 3qsg_A 255 -AHELGEVAATLCSV----GVEPLVAEAGYRRLTRVAQVRAAL 292 (312)
T ss_dssp -HHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHHHhcCCcc
Confidence 79999999999999 999999999999999999998876
No 16
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=100.00 E-value=7.4e-32 Score=229.83 Aligned_cols=208 Identities=23% Similarity=0.390 Sum_probs=191.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
++++.+++|++||++||++|++.+++.+.+.++|..|+++|+++++..++.+++.+++||+++.+++++++|+.++. ++
T Consensus 79 ~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~ 158 (296)
T 2gf2_A 79 GILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVV 158 (296)
T ss_dssp SGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEE
T ss_pred hHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeE
Confidence 45667789999999999999999999998888899999999999999999999999999999999999999999999 99
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhh--h-----hhccccCCCCc
Q 044696 85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYG--E-----RMIEKDFRPGG 157 (220)
Q Consensus 85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~--~-----~~~~~~~~~~f 157 (220)
++|..|.|..+|+++|.+...++..+.|++.++++.|++++++.+++..+.+.++++..+. | .+..++|.++|
T Consensus 159 ~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~ 238 (296)
T 2gf2_A 159 YCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGF 238 (296)
T ss_dssp EEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSS
T ss_pred EeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCC
Confidence 9999999999999999998999999999999999999999999999998777778776543 2 23457888899
Q ss_pred hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696 158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217 (220)
Q Consensus 158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~ 217 (220)
+++.+.||++++++.+++. |+++|+.+.+.++|+++.++|+|++||+++++++++.
T Consensus 239 ~~~~~~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~ 294 (296)
T 2gf2_A 239 GTTLMAKDLGLAQDSATST----KSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREE 294 (296)
T ss_dssp BHHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSCC
T ss_pred chHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhc
Confidence 9999999999999999999 9999999999999999999999999999999988754
No 17
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=100.00 E-value=3.7e-32 Score=230.63 Aligned_cols=208 Identities=25% Similarity=0.399 Sum_probs=196.4
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-cee
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTF 85 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~ 85 (220)
+.+.+++|++||++||..|...+++.+.+.++|++|+++|+++++..++.|++.+++||+++.+++++++| .++. +++
T Consensus 76 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~~ 154 (289)
T 2cvz_A 76 LYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVH 154 (289)
T ss_dssp HTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEE
T ss_pred HHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeEE
Confidence 45667889999999999999999999999988999999999999999999999999999999999999999 9998 999
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchhhHHHH
Q 044696 86 MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFAEYMVK 164 (220)
Q Consensus 86 ~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~~K 164 (220)
+++.+.+..+|+++|.+...++.++.|++.++++.|++++++.+++..+...++++..+.| .+.+++|+++|+++.+.|
T Consensus 155 ~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~k 234 (289)
T 2cvz_A 155 VGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVK 234 (289)
T ss_dssp EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHH
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHH
Confidence 9999999999999999999999999999999999999999999999988777788887888 899999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696 165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219 (220)
Q Consensus 165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~ 219 (220)
|++.+++.+++. |+++|+.+++.+.|+++.+.|+|++||+++++++++.+|
T Consensus 235 d~~~~~~~a~~~----gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~~~~ 285 (289)
T 2cvz_A 235 DLGIAMGVLDGE----KAPSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGG 285 (289)
T ss_dssp HHHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcC
Confidence 999999999999 999999999999999999999999999999999998766
No 18
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=100.00 E-value=1.8e-31 Score=229.93 Aligned_cols=206 Identities=23% Similarity=0.402 Sum_probs=194.6
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
++++.+.+|++|||+||++|...+++++.+.++|+.|+++|++|++..+..|++.++++|+++.+++++++|+.++. ++
T Consensus 109 ~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~ 188 (316)
T 2uyy_A 109 GVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSF 188 (316)
T ss_dssp CGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEE
T ss_pred hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCCEE
Confidence 46678889999999999999999999999988899999999999999999999999999999999999999999999 99
Q ss_pred ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHH
Q 044696 85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVK 164 (220)
Q Consensus 85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~K 164 (220)
++|++|.+...|+++|.+....+..+.|++.++++.|++++++.+++..+...++.+..+.|.+.+++|+++|+++.+.|
T Consensus 189 ~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~k 268 (316)
T 2uyy_A 189 FLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQK 268 (316)
T ss_dssp ECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHH
T ss_pred EeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999988777888887888898999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696 165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215 (220)
Q Consensus 165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~ 215 (220)
|++++++.+++. |+++|+.+++.++|+++.+.|+|++||++++++++
T Consensus 269 d~~~~~~~a~~~----gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~~ 315 (316)
T 2uyy_A 269 DLRLAIALGDAV----NHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYI 315 (316)
T ss_dssp HHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGTC
T ss_pred HHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHh
Confidence 999999999999 99999999999999999999999999999988653
No 19
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.97 E-value=8.1e-31 Score=230.34 Aligned_cols=202 Identities=20% Similarity=0.251 Sum_probs=172.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc----
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG---- 81 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~---- 81 (220)
++.+.+.+|++|||+||+.|.+++++++.+.++|++|+|+||+|++..++.|+ .+|+||+++++++++|+|+.++
T Consensus 100 ~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~lg~~~~ 178 (358)
T 4e21_A 100 RMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPGIG 178 (358)
T ss_dssp HHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHHSCCGG
T ss_pred HHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHhccccc
Confidence 56778899999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred ----------------c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------------
Q 044696 82 ----------------K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA------------------------ 120 (220)
Q Consensus 82 ----------------~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------------------------ 120 (220)
+ ++|+|+.|+|+.+|+++|.+.++.+++++|++.++++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~ 258 (358)
T 4e21_A 179 AAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRY 258 (358)
T ss_dssp GSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCC
T ss_pred cCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhccc
Confidence 7 99999999999999999999999999999999999998
Q ss_pred CCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCc-hhhHHHHHH---HHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696 121 GLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGG-FAEYMVKDM---GMGVDVVEESEDERVVVLPGAALGKQLFS 195 (220)
Q Consensus 121 Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f-~~~~~~KD~---~~~~~~a~~~~~~~g~~~p~~~~~~~~~~ 195 (220)
|+|++++.++++.++ ..||+++...+.+.. + |.+ .+....||. +++++++.+. |+|+|++..+ +|.
T Consensus 259 ~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~-~--p~~~~~~~~~~d~g~~r~~~~~A~~~----gvp~p~~~~a--l~~ 329 (358)
T 4e21_A 259 DLDLADITEVWRRGSVISSWLLDLSATALLD-S--PDLQEFQGRVSDSGEGRWTVAAAIDE----GVPAHVLSSA--LYE 329 (358)
T ss_dssp CCCHHHHHHHHTTTSTTCBHHHHHHHHHHHH-C--TTCTTC--CCCCCSHHHHHHHHHHHH----TCCCHHHHHH--HHH
T ss_pred CCCHHHHHHHHhCccHHHHHHHHHHHHHHhh-C--CChHHHHHHHHhcCcHHHHHHHHHHc----CCChHHHHHH--HHH
Confidence 999999999999887 789999887765543 3 322 234445555 7899999999 9999999875 555
Q ss_pred HHHHCCCCCCChHH-HHHHHHHhcC
Q 044696 196 AMVANGDGKFGTQG-LVSVIERING 219 (220)
Q Consensus 196 ~a~~~G~g~~d~~a-v~~~~~~~~~ 219 (220)
+...+ ++.+++. ++...|+..|
T Consensus 330 ~~~s~--~~~~~~~~l~~a~r~~fG 352 (358)
T 4e21_A 330 RFSSR--GEDDFANRLLSAMRYEFG 352 (358)
T ss_dssp HHHHT--TTTHHHHHHHHHHC----
T ss_pred HHHHC--CCcccHHHHHHHHHHhcC
Confidence 55553 5667654 8888777655
No 20
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.97 E-value=8.4e-30 Score=231.31 Aligned_cols=187 Identities=15% Similarity=0.179 Sum_probs=167.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P- 83 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~- 83 (220)
++.+.+.+|++|||+||+.|.+++++++.+.++|++|+|+||+|++..+++|. .+|+||+++++++++|+|+.++. +
T Consensus 88 ~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~pll~~ig~~v~ 166 (484)
T 4gwg_A 88 KLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKTIFQGIAAKVG 166 (484)
T ss_dssp HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCBCT
T ss_pred HHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHHHHHHhcCccc
Confidence 56788899999999999999999999999999999999999999999999999 99999999999999999999998 8
Q ss_pred ------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---hccCCChHHHHhhhhhhccccC
Q 044696 84 ------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAV---KGGAAGSMAMELYGERMIEKDF 153 (220)
Q Consensus 84 ------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~ 153 (220)
+|+|+.|+|+.+||++|.+.++++++++|++.++++ .|+|++++.+++ +.+...||+++.+.+.+..+|+
T Consensus 167 ~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~ 246 (484)
T 4gwg_A 167 TGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDT 246 (484)
T ss_dssp TSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT
T ss_pred CCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999999 999999999886 5777899999999999998888
Q ss_pred CCCchhhHHHHH-----H-HHHHHHHhhcccCCCCCccH-HHHHHHHHHHH
Q 044696 154 RPGGFAEYMVKD-----M-GMGVDVVEESEDERVVVLPG-AALGKQLFSAM 197 (220)
Q Consensus 154 ~~~f~~~~~~KD-----~-~~~~~~a~~~~~~~g~~~p~-~~~~~~~~~~a 197 (220)
++++.++...+. . +...+.+.+. |+|+|+ .+++..+|...
T Consensus 247 ~g~~~ld~i~d~~~~kgtG~wt~~~A~~~----gvp~p~i~~av~~R~~S~ 293 (484)
T 4gwg_A 247 DGKHLLPKIRDSAGQKGTGKWTAISALEY----GVPVTLIGEAVFARCLSS 293 (484)
T ss_dssp TSSBSGGGSCCCCCSSCTTHHHHHHHHHH----TCCCHHHHHHHHHHHHHH
T ss_pred cCCccHHHHhccccCcchHHHHHHHHHHc----CCCchHHHHHHHHHHHhh
Confidence 766777776433 3 5677889999 999994 44455665443
No 21
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.1e-26 Score=210.02 Aligned_cols=180 Identities=18% Similarity=0.270 Sum_probs=166.6
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--- 82 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--- 82 (220)
++.+.+.+|++|||+||+.|..++++.+.+.++|++|+|+||+|+|..++.|+ .+|+||+++++++++|+|+.++.
T Consensus 94 ~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll~~~g~~~d 172 (497)
T 2p4q_A 94 QIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIFQSISAKSD 172 (497)
T ss_dssp HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCEET
T ss_pred HHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHHHHhcCccC
Confidence 46778889999999999999999999999999999999999999999999999 89999999999999999999986
Q ss_pred ----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccCC
Q 044696 83 ----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDFR 154 (220)
Q Consensus 83 ----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~ 154 (220)
++|+|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++. .+...|++++.+.+.+.++||+
T Consensus 173 Ge~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~ 252 (497)
T 2p4q_A 173 GEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVD 252 (497)
T ss_dssp TEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTT
T ss_pred CCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCC
Confidence 4889999999999999999999999999999999999 6999999999984 5668899999999989999996
Q ss_pred CCchhhHHH-----HHHH-HHHHHHhhcccCCCCCccHHHHH
Q 044696 155 PGGFAEYMV-----KDMG-MGVDVVEESEDERVVVLPGAALG 190 (220)
Q Consensus 155 ~~f~~~~~~-----KD~~-~~~~~a~~~~~~~g~~~p~~~~~ 190 (220)
+.|.++.+. ||.. ++.+.+++. |+|+|+...+
T Consensus 253 ~~~~vd~i~D~~~~KgtG~~~~~~A~~~----Gv~~P~~~~a 290 (497)
T 2p4q_A 253 GKPLVEKIMDTAGQKGTGKWTAINALDL----GMPVTLIGEA 290 (497)
T ss_dssp SSBGGGGSCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred CccHHHHHHHhhccchHHHHHHHHHHHc----CCCCchHHHH
Confidence 679999888 8875 789999999 9999999885
No 22
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.92 E-value=1.1e-24 Score=198.01 Aligned_cols=180 Identities=14% Similarity=0.209 Sum_probs=163.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--- 82 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--- 82 (220)
++.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. ++|+||+++++++++|+|+.++.
T Consensus 98 ~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~ 176 (480)
T 2zyd_A 98 SLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILTKIAAVAE 176 (480)
T ss_dssp HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHHHHHSCBCT
T ss_pred HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHHHHHhcccc
Confidence 46678889999999999999999999999999999999999999999999999 89999999999999999999987
Q ss_pred -----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccC
Q 044696 83 -----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDF 153 (220)
Q Consensus 83 -----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~ 153 (220)
+.++|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++. .+...|++++.+.+.+.++||
T Consensus 177 dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~ 256 (480)
T 2zyd_A 177 DGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDE 256 (480)
T ss_dssp TSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCT
T ss_pred CCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCC
Confidence 3789999999999999999999999999999999999 6999999999884 466788999988888888999
Q ss_pred CCCchhhHHH-----HHH-HHHHHHHhhcccCCCCCccHHHHH
Q 044696 154 RPGGFAEYMV-----KDM-GMGVDVVEESEDERVVVLPGAALG 190 (220)
Q Consensus 154 ~~~f~~~~~~-----KD~-~~~~~~a~~~~~~~g~~~p~~~~~ 190 (220)
+++|.++.+. ||. +.+.+.+++. |+|+|+.+.+
T Consensus 257 ~~~~~v~~i~D~~~~k~tG~~~~~~A~~~----gv~~Pi~~~a 295 (480)
T 2zyd_A 257 DGNYLVDVILDEAANKGTGKWTSQSALDL----GEPLSLITES 295 (480)
T ss_dssp TSSBGGGGBCCCCCCCSCTTHHHHHHHHH----TCCCHHHHHH
T ss_pred CCcchHHHHHHHhcCchHHHHHHHHHHHc----CCCCchHHHH
Confidence 6678888766 444 4788999999 9999999886
No 23
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.91 E-value=2.4e-23 Score=189.31 Aligned_cols=185 Identities=16% Similarity=0.175 Sum_probs=165.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P- 83 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~- 83 (220)
.+.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|+ .+|+||+++++++++++|+.++. +
T Consensus 86 ~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll~~~g~~v~ 164 (482)
T 2pgd_A 86 KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKVG 164 (482)
T ss_dssp HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBCT
T ss_pred HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC-eEEeCCCHHHHHHHHHHHHHhhhhcc
Confidence 35667889999999999999999999999988999999999999999999999 78999999999999999999998 7
Q ss_pred ------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHh---ccCCChHHHHhhhhhhccccC
Q 044696 84 ------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA-GLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDF 153 (220)
Q Consensus 84 ------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~-Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~ 153 (220)
+++|+.|.|..+|+++|.+.+..+.+++|++.++++. |++++++.+++. .+...|++.+.+.+.+..++|
T Consensus 165 d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~ 244 (482)
T 2pgd_A 165 TGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDA 244 (482)
T ss_dssp TSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT
T ss_pred CCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCC
Confidence 7899999999999999999999999999999999999 999999999985 455778888888888888898
Q ss_pred CCCchhhHH------HHHHHHHHHHHhhcccCCCCCccHHH-HHHHHHH
Q 044696 154 RPGGFAEYM------VKDMGMGVDVVEESEDERVVVLPGAA-LGKQLFS 195 (220)
Q Consensus 154 ~~~f~~~~~------~KD~~~~~~~a~~~~~~~g~~~p~~~-~~~~~~~ 195 (220)
+++|.++.+ .|+.+.+.+.+++. |+|+|+.. .+.+++.
T Consensus 245 ~~~~~ld~i~d~~~~k~t~~~~~~~A~~~----Gv~~P~i~~av~~~~~ 289 (482)
T 2pgd_A 245 DGKHLLPKIRDSAGQKGTGKWTAISALEY----GVPVTLIGEAVFARCL 289 (482)
T ss_dssp TSSBSGGGSCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHHHHHHHH
T ss_pred CCCeeecccccccccccHHHHHHHHHHHc----CCCcchHHHHHHHHhh
Confidence 878888876 47778899999999 99999995 4555553
No 24
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.91 E-value=9.5e-24 Score=176.97 Aligned_cols=181 Identities=15% Similarity=0.080 Sum_probs=153.3
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-cee
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTF 85 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~ 85 (220)
+.+.+++ +|||+||++|.+.+++++.+.++| |+|+||+++|..++.|.+ ++++|+++ +++++ |+.+|. +++
T Consensus 76 ~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~~~~ 147 (264)
T 1i36_A 76 AGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLNIEV 147 (264)
T ss_dssp HHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCEEEE
T ss_pred HHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCeeEE
Confidence 4455544 999999999999999999998877 999999999999999998 89999887 88999 999999 999
Q ss_pred cCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHH
Q 044696 86 MGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVK 164 (220)
Q Consensus 86 ~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~K 164 (220)
+++ +|.+..+|+++|.+...++.++.|++.++++.|++++ .++.+..+.+.++. .+.+.+.+++|.++|+ ..|
T Consensus 148 ~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~---~~~ 221 (264)
T 1i36_A 148 RGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFR--ESAISRLKSSCIHARR---RYE 221 (264)
T ss_dssp CSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTH--HHHHHHHHHHHHTHHH---HHH
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHH--HHHHHHhcCCCCcchh---hHH
Confidence 998 8999999999999999999999999999999999987 77998876544443 2467788888888776 689
Q ss_pred HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCC
Q 044696 165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFG 206 (220)
Q Consensus 165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d 206 (220)
|++.+++.+++ . +++|+.+++.++|+++.+.|++.+|
T Consensus 222 ~~~~~~~~a~~----~-v~~p~~~~v~~~~~~~~~~~~~~~~ 258 (264)
T 1i36_A 222 EMKEVQDMLAE----V-IDPVMPTCIIRIFDKLKDVKVSADA 258 (264)
T ss_dssp HHHHHHHHHHT----T-SCCSHHHHHHHHHHHHCC------G
T ss_pred HHHHHHHHHHH----h-cCchHHHHHHHHHHHHHHcCCChhh
Confidence 99999998853 3 7999999999999999998887665
No 25
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.91 E-value=4.8e-23 Score=186.98 Aligned_cols=180 Identities=19% Similarity=0.276 Sum_probs=162.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P- 83 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~- 83 (220)
++.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. .+|+||+++.+++++++|+.++. +
T Consensus 88 ~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~ 166 (474)
T 2iz1_A 88 SLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAP 166 (474)
T ss_dssp HHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHHHHHSCBCT
T ss_pred HHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHHHHHhcccc
Confidence 45677889999999999999999999999988899999999999999999999 78999999999999999999987 4
Q ss_pred -------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhcccc
Q 044696 84 -------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKD 152 (220)
Q Consensus 84 -------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~ 152 (220)
.++|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++. .+...|++++.+.+.+.++|
T Consensus 167 ~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d 246 (474)
T 2iz1_A 167 QDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKD 246 (474)
T ss_dssp TTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBC
T ss_pred cCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCC
Confidence 788999999999999999999999999999999999 7999999999984 45577888888888888889
Q ss_pred CCCC-chhhHHH-----HHHH-HHHHHHhhcccCCCCCccHHHHH
Q 044696 153 FRPG-GFAEYMV-----KDMG-MGVDVVEESEDERVVVLPGAALG 190 (220)
Q Consensus 153 ~~~~-f~~~~~~-----KD~~-~~~~~a~~~~~~~g~~~p~~~~~ 190 (220)
|.++ |.++.+. ||.. .+.+.+++. |+|+|+.+.+
T Consensus 247 ~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~----gv~~P~~~~a 287 (474)
T 2iz1_A 247 DEGEGYIVDKILDKAGNKGTGKWTSESALDL----GVPLPLITES 287 (474)
T ss_dssp SSSSSBGGGGBCSCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred CCCChhHHHHHHHhhcccchHHHHHHHHHHc----CCCCchHHHH
Confidence 9876 8888766 6665 788999999 9999999886
No 26
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.90 E-value=2.9e-23 Score=188.13 Aligned_cols=180 Identities=15% Similarity=0.082 Sum_probs=156.0
Q ss_pred cchhhcCCCCCEEEecCCCCHHHHHHHHHHHH--hcC------CcEEEecCCCChHHhhccce---eEEecCCHHhHHHH
Q 044696 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVAR--ERD------CWAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWL 73 (220)
Q Consensus 5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~--~~G------~~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~ 73 (220)
+++.+++++|++||++||+.|.+++++++.+. +.| ..++++|+...+..+..+.+ .+++|++++.++++
T Consensus 131 ~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~ 210 (478)
T 3g79_A 131 RNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRA 210 (478)
T ss_dssp HHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHH
T ss_pred HHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHH
Confidence 57888999999999999999999999997543 345 46899999888777766655 68899999999999
Q ss_pred HHHHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccc
Q 044696 74 TPLFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEK 151 (220)
Q Consensus 74 ~~~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~ 151 (220)
+|+|+.+ +. ++++|++++|+.+|+++|++.+.+++.++|++.+|++.|+|+++++++++..+. + +|..+
T Consensus 211 ~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~~----~-----ri~~~ 281 (478)
T 3g79_A 211 VELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLKG----E-----GITRA 281 (478)
T ss_dssp HHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSCC----S-----SSCCC
T ss_pred HHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCch----h-----hhccc
Confidence 9999999 78 999999999999999999999999999999999999999999999999986421 1 55566
Q ss_pred cCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCC-------ccHHHHHHHHHHHH
Q 044696 152 DFRPGG--FAEYMVKDMGMGVDVVEESEDERVVV-------LPGAALGKQLFSAM 197 (220)
Q Consensus 152 ~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~-------~p~~~~~~~~~~~a 197 (220)
.|.|+| ...++.||+.++++.+++. |++ +++..++++..+.-
T Consensus 282 ~~~PG~G~GG~c~~KD~~~l~~~a~~~----g~~~~~~~~~~~li~~~~~iN~~~ 332 (478)
T 3g79_A 282 VLWPGAGVGGHCLTKDTYHLERGVKIG----RGELDYPEGADSIYVLARKVNDFM 332 (478)
T ss_dssp CCCCCSCCCSSHHHHHHHHHHHHHTTS----SCCCCCCSSCCCHHHHHHHHHHHH
T ss_pred cCCCCCCcchhhHHHHHHHHHHHHHHc----CCCcccccchhHHHHHHHHHHHHH
Confidence 777765 6779999999999999999 987 89999998765543
No 27
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.90 E-value=2.7e-23 Score=187.11 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=154.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecCC-HHhHHHHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQWLTPL 76 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~~~~~~ 76 (220)
++.+++++|++||++||+.|.+++++.+.+.+++.. .|.+|.++|..++.|++ .+++||+ ++++++++++
T Consensus 114 ~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~l 192 (446)
T 4a7p_A 114 EIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREI 192 (446)
T ss_dssp HHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHH
Confidence 577889999999999999999999999999988766 78999999999999986 7899996 7899999999
Q ss_pred HHHhcc-c---eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcccc
Q 044696 77 FEVLGK-P---TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKD 152 (220)
Q Consensus 77 l~~~~~-~---~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~ 152 (220)
|+.+.+ . +++++++.|+.+|+++|.+.+.+++.++|+..+|++.|+|+++++++++..+. +-...
T Consensus 193 y~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~r-----------ig~~~ 261 (446)
T 4a7p_A 193 YRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCEQVGADVQEVSRGIGMDNR-----------IGGKF 261 (446)
T ss_dssp HCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT-----------C---C
T ss_pred HHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCC-----------CCCcc
Confidence 999986 3 88899999999999999999999999999999999999999999999987531 11112
Q ss_pred CC--CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 153 FR--PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 153 ~~--~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
+. ++|...++.||+.++++.+++. |+++|+++++++.++..
T Consensus 262 l~pg~G~gg~c~~KD~~~l~~~A~~~----g~~~~l~~~~~~iN~~~ 304 (446)
T 4a7p_A 262 LHAGPGYGGSCFPKDTLALMKTAADN----ETPLRIVEATVQVNDAR 304 (446)
T ss_dssp CCCCSCCCTTTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHH
Confidence 23 4689999999999999999999 99999999998887654
No 28
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.89 E-value=3.8e-22 Score=181.27 Aligned_cols=180 Identities=20% Similarity=0.194 Sum_probs=160.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--- 82 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--- 82 (220)
.+.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. .+|+||+++++++++++|+.++.
T Consensus 88 ~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~ 166 (478)
T 1pgj_A 88 QLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKAD 166 (478)
T ss_dssp HHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCT
T ss_pred HHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC-eEeccCCHHHHHHHHHHHHHhccccc
Confidence 35567889999999999999999999999988899999999999999999999 78999999999999999999986
Q ss_pred -----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh----ccCCChHHHHhhhhhhccccC
Q 044696 83 -----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK----GGAAGSMAMELYGERMIEKDF 153 (220)
Q Consensus 83 -----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~----~~~~~s~~~~~~~~~~~~~~~ 153 (220)
++++|+.|.|..+|+++|.+.+..+.+++|++.++++.|++++++.+++. .+...|+..+.+.+.+.++||
T Consensus 167 dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~ 246 (478)
T 1pgj_A 167 DGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDK 246 (478)
T ss_dssp TSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCT
T ss_pred CCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCC
Confidence 37889999999999999999999999999999999999999999999986 566778888888887877888
Q ss_pred CCCchhhHHH-----HHH-HHHHHHHhhcccCCCCCccHHHHH
Q 044696 154 RPGGFAEYMV-----KDM-GMGVDVVEESEDERVVVLPGAALG 190 (220)
Q Consensus 154 ~~~f~~~~~~-----KD~-~~~~~~a~~~~~~~g~~~p~~~~~ 190 (220)
...|.++.+. ||. +.+.+.+++. |+|+|+.+.+
T Consensus 247 ~G~~~ld~i~D~~~~kgtg~~~~~~A~~~----Gv~~Pi~~~a 285 (478)
T 1pgj_A 247 DGSYLTEHVMDRIGSKGTGLWSAQEALEI----GVPAPSLNMA 285 (478)
T ss_dssp TSSBGGGGBCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred CChhHHHHHHHHhcCccHHHHHHHHHHHh----CCCChHHHHH
Confidence 3238888776 554 7999999999 9999999983
No 29
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.88 E-value=1.4e-22 Score=182.75 Aligned_cols=177 Identities=14% Similarity=0.109 Sum_probs=156.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc---EEEecCCCChHHhhccce--------eEEecCC-HHhHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW---AVDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQWL 73 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~---~ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~~~ 73 (220)
++.+.+++|++||++||+.|.+++++.+.+.+++.. .+|.+|..+|..++.|++ .+++||+ +++++++
T Consensus 107 ~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~ 186 (450)
T 3gg2_A 107 SIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELI 186 (450)
T ss_dssp HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHH
T ss_pred HHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHH
Confidence 466788999999999999999999999999886543 378999999998999887 6888985 7899999
Q ss_pred HHHHHHhcc---ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc
Q 044696 74 TPLFEVLGK---PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE 150 (220)
Q Consensus 74 ~~~l~~~~~---~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~ 150 (220)
+++++.+++ ++++++++.|+.+|+++|.+.+.++..++|+..+|++.|+|++++++++...+ ++..
T Consensus 187 ~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------rig~ 255 (450)
T 3gg2_A 187 TSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCERVGADVSMVRLGIGSDS-----------RIGS 255 (450)
T ss_dssp HHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTST-----------TTCS
T ss_pred HHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHcCCC-----------CCCc
Confidence 999999975 68889999999999999999999999999999999999999999999998752 3434
Q ss_pred ccCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 151 KDFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 151 ~~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
..|.| +|...++.||++++++.+++. |+++|+++++++.++..
T Consensus 256 ~~~~pg~G~gg~c~~KD~~~l~~~a~~~----g~~~~l~~~~~~iN~~~ 300 (450)
T 3gg2_A 256 KFLYPGCGYGGSCFPKDVKALIRTAEDN----GYRMEVLEAVERVNEKQ 300 (450)
T ss_dssp SSCCCSSCCCSSHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred ccCCCCCCCCcccHHhhHHHHHHHHHHc----CCCcHHHHHHHHHHHHH
Confidence 45555 488999999999999999999 99999999999887654
No 30
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.86 E-value=1.5e-21 Score=174.80 Aligned_cols=172 Identities=12% Similarity=0.089 Sum_probs=138.4
Q ss_pred ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHh-cCC------cEEEecCCCChHHhhccce---eEEecCCHHhHHHH
Q 044696 4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARE-RDC------WAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWL 73 (220)
Q Consensus 4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~-~G~------~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~ 73 (220)
.+++.+++++|++||++||+.|.+++++.+.+.+ +|. .++++|....+..+..+.+ .+++|+++++++++
T Consensus 112 ~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~ 191 (431)
T 3ojo_A 112 LDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAG 191 (431)
T ss_dssp HHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHH
T ss_pred HHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHH
Confidence 3578899999999999999999999999987654 564 6899998877766666665 78999999999999
Q ss_pred HHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcccc
Q 044696 74 TPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKD 152 (220)
Q Consensus 74 ~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~ 152 (220)
+++++.+++ ++|+|++++|+.+|+++|++.+.+++.+.|+..+|++.|+|+++++++++..+. + +-
T Consensus 192 ~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~r-----------i--~~ 258 (431)
T 3ojo_A 192 KRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPR-----------V--NI 258 (431)
T ss_dssp HHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT-----------C--CC
T ss_pred HHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCC-----------c--cc
Confidence 999999999 999999999999999999999999999999999999999999999999986531 1 12
Q ss_pred CCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696 153 FRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFS 195 (220)
Q Consensus 153 ~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~ 195 (220)
|.| +|.-.++.||.......+++. | ++..++++..+
T Consensus 259 l~pG~G~GG~C~pkD~~~L~~~a~~~----~---~li~~~~~iN~ 296 (431)
T 3ojo_A 259 HQPGPGVGGHCLAVDPYFIIAKDPEN----A---KLIQTGREINN 296 (431)
T ss_dssp CCCCSCCCCCCBCSCC---------C----C---HHHHHHHHHHH
T ss_pred CCCCCCccccchhhhHHHHHHHHHHH----h---HHHHHHHHHHH
Confidence 334 467777889999999988888 7 77777766544
No 31
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.83 E-value=8.9e-21 Score=171.72 Aligned_cols=175 Identities=13% Similarity=0.081 Sum_probs=149.6
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhcccee--------EEecC-----CHHhHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA--------IFAAG-----DSAVVQW 72 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~--------i~~gG-----~~~~~~~ 72 (220)
++.+.+++|++||++||+.|.+++++.+.+.+.+..++|+||+++|..+..|++. +++|| +++++++
T Consensus 116 ~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~ 195 (467)
T 2q3e_A 116 RIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQA 195 (467)
T ss_dssp HHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHH
T ss_pred HHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHH
Confidence 4667788999999999999999999999998888778999999999999999986 88999 7788999
Q ss_pred HHHHHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc
Q 044696 73 LTPLFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE 150 (220)
Q Consensus 73 ~~~~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~ 150 (220)
++++++.+ +. ++++++++.|..+|+++|.+...+++.+.|++.++++.|+|++++.+++...+.. ..
T Consensus 196 ~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~-----------~~ 264 (467)
T 2q3e_A 196 LCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRI-----------GN 264 (467)
T ss_dssp HHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT-----------CS
T ss_pred HHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCC-----------Cc
Confidence 99999999 77 9999999999999999999999999999999999999999999999999875421 11
Q ss_pred ccCCCC--chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696 151 KDFRPG--GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN 200 (220)
Q Consensus 151 ~~~~~~--f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~ 200 (220)
..|.|+ |...++.||++++++.+++. |++ .+.++|+.+.+.
T Consensus 265 ~~~~pg~g~gg~c~~kD~~~l~~~a~~~----g~~-----~~~~~~~~~~~~ 307 (467)
T 2q3e_A 265 KFLKASVGFGGSCFQKDVLNLVYLCEAL----NLP-----EVARYWQQVIDM 307 (467)
T ss_dssp SSCCCCSCCCSSSHHHHHHHHHHHHHHT----TCH-----HHHHHHHHHHHH
T ss_pred cccCCCCCCCCccHHHHHHHHHHHHHHc----CCc-----hHHHHHHHHHHH
Confidence 223443 67778999999999999999 987 334444444443
No 32
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.83 E-value=1.5e-19 Score=161.89 Aligned_cols=170 Identities=16% Similarity=0.138 Sum_probs=145.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce---eEEecCCHHhHHHHHHHHHH--h
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWLTPLFEV--L 80 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~~~~l~~--~ 80 (220)
++.+ +++|++||++||+.|.+++++.+.+.+.++ +.+|+++++..+..+.+ .+++||+++.++++.++|.. +
T Consensus 139 ~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v--~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~ 215 (432)
T 3pid_A 139 DVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV--IFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAI 215 (432)
T ss_dssp HHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE--EECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCS
T ss_pred HHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE--eecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhc
Confidence 5677 889999999999999999999999987754 55999999999999998 89999999999999999987 5
Q ss_pred cc--ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccC-CC--
Q 044696 81 GK--PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDF-RP-- 155 (220)
Q Consensus 81 ~~--~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~-- 155 (220)
.. .+++++++.|+.+||++|.+.+.+++.++|+..+|++.|+|+++++++++..+ ++-. .| .|
T Consensus 216 ~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~GiD~~~v~~~~~~dp-----------rig~-~~~~pg~ 283 (432)
T 3pid_A 216 KQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQIIEGVCLDP-----------RIGN-HYNNPSF 283 (432)
T ss_dssp SSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TTCS-SSCCCCS
T ss_pred cCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCC-----------CCCc-ccCCCCC
Confidence 54 57789999999999999999999999999999999999999999999998643 2211 12 24
Q ss_pred CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696 156 GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA 196 (220)
Q Consensus 156 ~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~ 196 (220)
+|.-.++-||....+ ++.. |++.++..++++..+.
T Consensus 284 G~GG~C~pkD~~~L~--~~~~----~~~~~li~~~~~~N~~ 318 (432)
T 3pid_A 284 GYGGYCLPKDTKQLL--ANYE----SVPNNIIAAIVDANRT 318 (432)
T ss_dssp CCCTTTHHHHHHHHH--HHTT----TSCCSHHHHHHHHHHH
T ss_pred CCcccchhhhHHHHH--HHhc----CCchhHHHHHHHHHHh
Confidence 567788999998776 3446 8899999999876544
No 33
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.82 E-value=5.3e-20 Score=167.26 Aligned_cols=175 Identities=13% Similarity=0.060 Sum_probs=144.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHh-cCCc-EEEecCCCChHHhhccc-----e---eEEecCCH-----HhH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARE-RDCW-AVDAPVSGGDIGARDGK-----L---AIFAAGDS-----AVV 70 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~-~G~~-~ldapV~g~~~~a~~g~-----l---~i~~gG~~-----~~~ 70 (220)
++.+++++|++||++||+.|.+++++.+.+.+ .++. ++|.+|..+|..++.|. + .+++||+. +++
T Consensus 120 ~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~ 199 (481)
T 2o3j_A 120 TIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAV 199 (481)
T ss_dssp HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHH
T ss_pred HHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHH
Confidence 46678899999999999999999999999988 6632 45555555555555554 3 58889976 578
Q ss_pred HHHHHHHHHhc-c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhh
Q 044696 71 QWLTPLFEVLG-K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERM 148 (220)
Q Consensus 71 ~~~~~~l~~~~-~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~ 148 (220)
++++++++.++ . ++++++++.+...|+++|.+...+++.+.|+..+|++.|+|+++++++++.++ ++
T Consensus 200 ~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~-----------ri 268 (481)
T 2o3j_A 200 AELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDT-----------RI 268 (481)
T ss_dssp HHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTST-----------TT
T ss_pred HHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCC-----------CC
Confidence 89999999998 3 88899999999999999999999999999999999999999999999998753 33
Q ss_pred ccccCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCC--ccHHHHHHHHHH
Q 044696 149 IEKDFRPGG--FAEYMVKDMGMGVDVVEESEDERVVV--LPGAALGKQLFS 195 (220)
Q Consensus 149 ~~~~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~--~p~~~~~~~~~~ 195 (220)
....|.|+| ...++.||++++++.+++. |++ +|+.+++.+.-+
T Consensus 269 ~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~----g~~~~~~l~~~~~~~N~ 315 (481)
T 2o3j_A 269 GSKFLQASVGFGGSCFQKDVLSLVYLCESL----NLPQVADYWQGVININN 315 (481)
T ss_dssp CSSSCCCCSCCCSSSHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCccCCccHHHHHHHHHHHHHHc----CCCccchHHHHHHHHHH
Confidence 334566754 7888999999999999999 999 999988866544
No 34
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.79 E-value=8.2e-19 Score=159.30 Aligned_cols=176 Identities=15% Similarity=0.086 Sum_probs=151.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc---CCcE-EEecCCCChHHhhccce--------eEEecCC-H----H
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER---DCWA-VDAPVSGGDIGARDGKL--------AIFAAGD-S----A 68 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~---G~~~-ldapV~g~~~~a~~g~l--------~i~~gG~-~----~ 68 (220)
.+.+.+++|++||++||+.|.+++++.+.+.+. | .| +|.+|..+|..++.|.. .+++|++ + +
T Consensus 113 ~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~ 191 (478)
T 2y0c_A 113 NIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGER 191 (478)
T ss_dssp HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHH
T ss_pred HHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHH
Confidence 466778899999999999999999999888764 4 45 88899999999999987 6888887 5 6
Q ss_pred hHHHHHHHHHHhc--c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhh
Q 044696 69 VVQWLTPLFEVLG--K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYG 145 (220)
Q Consensus 69 ~~~~~~~~l~~~~--~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~ 145 (220)
++++++++|+.+. . ++++++++.+...|+++|.+...++..+.|+..++++.|+|++++.+.+.. .
T Consensus 192 ~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~-----------~ 260 (478)
T 2y0c_A 192 ARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGS-----------D 260 (478)
T ss_dssp HHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT-----------S
T ss_pred HHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhc-----------C
Confidence 8899999999887 3 788899999999999999999999999999999999999999999988863 2
Q ss_pred hhhccccCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 146 ERMIEKDFRPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 146 ~~~~~~~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
+++....|.|++ ...++.||...+.+.+++. |+++|+.+++.++++..
T Consensus 261 ~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~----gv~~pl~~~v~~in~~~ 310 (478)
T 2y0c_A 261 PRIGYHFLYAGCGYGGSCFPKDVEALIRTADEH----GQSLQILKAVSSVNATQ 310 (478)
T ss_dssp TTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred CccCcccCCCCcccccCcCHHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHh
Confidence 344445566655 4456799999999999999 99999999999888754
No 35
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.74 E-value=5.7e-18 Score=152.01 Aligned_cols=175 Identities=15% Similarity=0.019 Sum_probs=150.6
Q ss_pred hhhcCCC---CCEEEecCCCCHHH-HHHHHHHHHhc-CCcE-EEecCCCChHHhhccce--------eEEecCC-HHhHH
Q 044696 7 IVSALNP---GAVYVDTTSSHPAL-AREIFKVARER-DCWA-VDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQ 71 (220)
Q Consensus 7 i~~~~~~---g~~ivd~ST~~p~~-~~~la~~~~~~-G~~~-ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~ 71 (220)
+.+.+++ +++||++||+.|.+ .+.+.+.+.+. |.++ +|.+|..+|..+..|.. .+++|++ +++.+
T Consensus 106 i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~ 185 (436)
T 1mv8_A 106 IGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGD 185 (436)
T ss_dssp HHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHH
T ss_pred HHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHH
Confidence 4556777 99999999999999 78888888775 7777 78899999998888887 7888887 88889
Q ss_pred HHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhc-
Q 044696 72 WLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMI- 149 (220)
Q Consensus 72 ~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~- 149 (220)
+++++++.++. +++ ++++.+...|++.|.+....+..+.|+..++++.|+|++++.+.+... +++.
T Consensus 186 ~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~-----------~r~~~ 253 (436)
T 1mv8_A 186 LLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVICQD-----------HKLNL 253 (436)
T ss_dssp HHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTC-----------TTTTT
T ss_pred HHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-----------CCCCC
Confidence 99999999988 555 889999999999999999999999999999999999999999988752 2333
Q ss_pred -cccCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 150 -EKDFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 150 -~~~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
.+.|.| +|...++.||...+.+.+++. |+++|+.+++++..+..
T Consensus 254 ~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~----g~~~pl~~~v~~in~~~ 300 (436)
T 1mv8_A 254 SRYYMRPGFAFGGSCLPKDVRALTYRASQL----DVEHPMLGSLMRSNSNQ 300 (436)
T ss_dssp SSTTCSCCSCCCSSSHHHHHHHHHHHHHHT----TCCCTTGGGHHHHHHHH
T ss_pred cccCCCCcccccCcCcHhhHHHHHHHHHHc----CCCcHHHHHHHHHHhHh
Confidence 445566 578889999999999999999 99999999998876643
No 36
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.72 E-value=9.5e-17 Score=142.76 Aligned_cols=172 Identities=13% Similarity=0.043 Sum_probs=139.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhcccee---EEecCCH-------HhHHHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA---IFAAGDS-------AVVQWLTP 75 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~---i~~gG~~-------~~~~~~~~ 75 (220)
.+.+ +.+|++||++||+.|.+++++.+.+.+. .++.+|....+..+..+.+. +++||++ +..+++.+
T Consensus 103 ~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~ 179 (402)
T 1dlj_A 103 EVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFAL 179 (402)
T ss_dssp HHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHH
T ss_pred HHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHH
Confidence 3556 7889999999999999999999887654 78899988777665544444 8899987 55666777
Q ss_pred HHHH-hc--c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccc
Q 044696 76 LFEV-LG--K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEK 151 (220)
Q Consensus 76 ~l~~-~~--~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~ 151 (220)
+|.. +. . ++++++++.+...|+++|.+...+++.+.|+..+|++.|+|+++++++++..+ ++...
T Consensus 180 ~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------ri~~~ 248 (402)
T 1dlj_A 180 LLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDD-----------RIGMH 248 (402)
T ss_dssp HHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TTCSS
T ss_pred HHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCC-----------CCCcC
Confidence 7764 43 2 57889999999999999999999999999999999999999999999998654 22222
Q ss_pred cCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 152 DFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 152 ~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
.+.| +|...++.||+.++++.+ . |+++|+++++++..+..
T Consensus 249 ~~~pg~g~gg~c~~kD~~~l~~~a--~----~~~~~l~~~~~~~N~~~ 290 (402)
T 1dlj_A 249 YNNPSFGYGGYSLPKDTKQLLANY--N----NIPQTLIEAIVSSNNVR 290 (402)
T ss_dssp SCCCCSSCCSSHHHHHHHHHHHHH--T----TSSCSHHHHHHHHHHHH
T ss_pred CCCCCCccCCccHHhhHHHHHHHh--c----CCChHHHHHHHHHHHHh
Confidence 3446 578889999999999887 4 77999999998776644
No 37
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.52 E-value=1.7e-13 Score=114.20 Aligned_cols=174 Identities=8% Similarity=0.023 Sum_probs=135.6
Q ss_pred hhhcCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccc
Q 044696 7 IVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKP 83 (220)
Q Consensus 7 i~~~~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~ 83 (220)
++..+.+|+++|++ ++++++. +.+.+. ++.++++ ++.+.|.....|.+.++.|+ +++.+++++++|+.+|.+
T Consensus 76 v~~~l~~~~~vv~~~~~~~~~~---l~~~~~-~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G~~ 150 (259)
T 2ahr_A 76 VLKPLHFKQPIISMAAGISLQR---LATFVG-QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGST 150 (259)
T ss_dssp HHTTSCCCSCEEECCTTCCHHH---HHHHHC-TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEE
T ss_pred HHHHhccCCEEEEeCCCCCHHH---HHHhcC-CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCE
Confidence 34455689999999 5788765 334443 5678998 88888988888887788877 889999999999999988
Q ss_pred eecCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHhhh--hhhccc-cCCCCc
Q 044696 84 TFMGGAGCGQSCKIA--NQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMELYG--ERMIEK-DFRPGG 157 (220)
Q Consensus 84 ~~~G~~G~a~~~Kl~--~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~~~--~~~~~~-~~~~~f 157 (220)
+++++......+|+. .|.+....+.+++|+ +++.|+|++.+++++..+...++ ++..+. |.++.+ .++|+|
T Consensus 151 ~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~ 227 (259)
T 2ahr_A 151 FDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGG 227 (259)
T ss_dssp EECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTS
T ss_pred EEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCCh
Confidence 889987888888885 344555566666666 78899999999999988766666 555454 776644 467899
Q ss_pred hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHH
Q 044696 158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVA 199 (220)
Q Consensus 158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~ 199 (220)
++....||++ +. |++..+.+++.+.++++.+
T Consensus 228 ~~~~~~~~l~-------~~----g~~~~~~~a~~~~~~r~~~ 258 (259)
T 2ahr_A 228 TTIAGLMELE-------RL----GLTATVSSAIDKTIDKAKS 258 (259)
T ss_dssp HHHHHHHHHH-------HH----THHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-------HC----ChHHHHHHHHHHHHHHHhc
Confidence 9999999985 56 8888899999998888764
No 38
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.49 E-value=2.1e-13 Score=113.60 Aligned_cols=162 Identities=14% Similarity=0.083 Sum_probs=127.6
Q ss_pred CCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecC-C-
Q 044696 14 GAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMG-G- 88 (220)
Q Consensus 14 g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G-~- 88 (220)
+++||++ |++++ +++.+.+. .+.+|+++ +.+.|..+..|.+.++.++ +++.+++++++|+.+|..++++ +
T Consensus 81 ~~ivv~~~~g~~~---~~l~~~~~-~~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 155 (263)
T 1yqg_A 81 GALVLSVAAGLSV---GTLSRYLG-GTRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLDDEE 155 (263)
T ss_dssp TCEEEECCTTCCH---HHHHHHTT-SCCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEEECSSTT
T ss_pred CCEEEEecCCCCH---HHHHHHcC-CCCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh
Confidence 8999999 88887 44555554 36789999 8888988888988888888 8899999999999999833888 6
Q ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHhhh--h-hhccccCCCC
Q 044696 89 --------AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMELYG--E-RMIEKDFRPG 156 (220)
Q Consensus 89 --------~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~~~--~-~~~~~~~~~~ 156 (220)
.|++. .+....+.++.|+ +++.|++++++.+++..+...++ ++.... | .+.++.++|+
T Consensus 156 ~~~~~~al~g~~~-------~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
T 1yqg_A 156 KMHGITGISGSGP-------AYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKG 225 (263)
T ss_dssp HHHHHHHHTTSHH-------HHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTT
T ss_pred hccHHHHHHccHH-------HHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCC
Confidence 33332 2234555566666 88999999999999877655555 555554 5 6777888899
Q ss_pred chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696 157 GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG 201 (220)
Q Consensus 157 f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G 201 (220)
|++..+.||+ ++. |++.|+.+++.+.|+++.+.|
T Consensus 226 ~~~~~~l~~l-------~~~----~~~~~~~~a~~~~~~~~~~~~ 259 (263)
T 1yqg_A 226 GTTHEAVEAF-------RRH----RVAEAISEGVCACVRRSQEME 259 (263)
T ss_dssp SHHHHHHHHH-------HHT----THHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHH-------HHC----CHHHHHHHHHHHHHHHHHHHH
Confidence 9998888887 557 999999999999999998765
No 39
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.48 E-value=3.4e-14 Score=120.76 Aligned_cols=187 Identities=12% Similarity=0.010 Sum_probs=135.2
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc----CCcEEEecCCCC--hHHhhccceeEEe--cCCHHhHHHHHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER----DCWAVDAPVSGG--DIGARDGKLAIFA--AGDSAVVQWLTPLF 77 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~----G~~~ldapV~g~--~~~a~~g~l~i~~--gG~~~~~~~~~~~l 77 (220)
.+.+.+.++++||++++.-+ ..+.+++.+.+. |..+.++++++. +.....|.+.+.. +++++.+++++++|
T Consensus 93 ~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll 171 (316)
T 2ew2_A 93 AIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVF 171 (316)
T ss_dssp HHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHH
T ss_pred HHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHH
Confidence 35566788999999987433 445666666544 445566777763 3345567777653 66788899999999
Q ss_pred HHhcc-ceecCCCCHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHcCCCH--HHHHHHHhc
Q 044696 78 EVLGK-PTFMGGAGCGQSCKIANQIVV---------------------GANLLGLSEGLVFADEAGLDV--RKWRDAVKG 133 (220)
Q Consensus 78 ~~~~~-~~~~G~~G~a~~~Kl~~n~~~---------------------~~~~~~~aEa~~la~~~Gl~~--~~~~~~l~~ 133 (220)
+.++. +++.++.+.+...|++.|.++ ..+..++.|++.++++.|+++ +.+.+.+..
T Consensus 172 ~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~ 251 (316)
T 2ew2_A 172 QKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQ 251 (316)
T ss_dssp HHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred HhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHH
Confidence 99998 888888999999999999642 456788999999999999997 467777764
Q ss_pred cCCChHHHHhhhhhhccccC-CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696 134 GAAGSMAMELYGERMIEKDF-RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN 200 (220)
Q Consensus 134 ~~~~s~~~~~~~~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~ 200 (220)
........+++ +.|. .|+ ..++..+ ..||+..+++.+++. |+++|+.+.+.++++.....
T Consensus 252 ~~~~~~~~~~~-~sm~-~d~~~~g~~~E-~~~~~~~~~~~a~~~----gv~~P~~~~~~~~~~~~~~~ 312 (316)
T 2ew2_A 252 TYDPNGIGLHY-PSMY-QDLIKNHRLTE-IDYINGAVWRKGQKY----NVATPFCAMLTQLVHGKEEL 312 (316)
T ss_dssp TTCTTTTTTSC-CHHH-HHHTTTCCCCS-GGGTHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHH
T ss_pred HhccccCCCCC-cHHH-HHHHHcCCcch-HHHHhhHHHHHHHHh----CCCCCHHHHHHHHHHHHHhh
Confidence 22111001111 2222 344 4555555 689999999999999 99999999999999876543
No 40
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.45 E-value=3e-14 Score=119.91 Aligned_cols=178 Identities=11% Similarity=0.031 Sum_probs=126.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCcEEEecCCCC-hHHhhccceeEEe-cCCHHhHHHHHHHHHHhc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARE--RDCWAVDAPVSGG-DIGARDGKLAIFA-AGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~--~G~~~ldapV~g~-~~~a~~g~l~i~~-gG~~~~~~~~~~~l~~~~ 81 (220)
.+.+.+.++++||++++ .+...+.+.+.+.+ .|..|..+.+.++ +..+..|.+.+.. +++++.+++++++|+.++
T Consensus 82 ~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g 160 (291)
T 1ks9_A 82 SLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL 160 (291)
T ss_dssp HHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHHHHHHTTS
T ss_pred HHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHHHHHHhcC
Confidence 35566788999999865 44444555555543 3444323333333 5566778877765 566778899999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCH--HHH----HHHHhccC-
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVV------------------GANLLGLSEGLVFADEAGLDV--RKW----RDAVKGGA- 135 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~------------------~~~~~~~aEa~~la~~~Gl~~--~~~----~~~l~~~~- 135 (220)
. +++.++.+.+...|+++|..+ .....++.|++.++++.|+++ +.+ .+++..+.
T Consensus 161 ~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~ 240 (291)
T 1ks9_A 161 PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE 240 (291)
T ss_dssp SCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTT
T ss_pred CCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCC
Confidence 9 889999999999999999888 678899999999999999987 454 44444322
Q ss_pred CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696 136 AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV 198 (220)
Q Consensus 136 ~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~ 198 (220)
..|.+++. +..++..+.. ++..++++.+++. |+|+|+.+.+.++++...
T Consensus 241 ~~ssm~~d---------~~~g~~~e~~-~~~g~~~~~a~~~----gv~~P~~~~~~~~~~~~e 289 (291)
T 1ks9_A 241 NISSMLQD---------IRALRHTEID-YINGFLLRRARAH----GIAVPENTRLFEMVKRKE 289 (291)
T ss_dssp CCCHHHHH---------HHTTCCCSGG-GTHHHHHHHHHHH----TCCCHHHHHHHHHHHHHH
T ss_pred CCChHHHH---------HHcCCccHHH-HHHHHHHHHHHHh----CCCCCHHHHHHHHHHHHh
Confidence 33333322 2222222222 5688999999999 999999999999988653
No 41
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.45 E-value=1.2e-14 Score=120.67 Aligned_cols=94 Identities=15% Similarity=0.227 Sum_probs=85.0
Q ss_pred CCCEEEecC-----------CCCHHHHHHHHHHHHh--------cCCcEEEecCCCChHHhhccceeEEecCC-HHhHHH
Q 044696 13 PGAVYVDTT-----------SSHPALAREIFKVARE--------RDCWAVDAPVSGGDIGARDGKLAIFAAGD-SAVVQW 72 (220)
Q Consensus 13 ~g~~ivd~S-----------T~~p~~~~~la~~~~~--------~G~~~ldapV~g~~~~a~~g~l~i~~gG~-~~~~~~ 72 (220)
+|++|||+| |++|++.+.+++.+++ +|..|+|+||++++..++.+++.++++|+ ++++++
T Consensus 116 ~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~ 195 (245)
T 3dtt_A 116 AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAE 195 (245)
T ss_dssp TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHH
T ss_pred CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHH
Confidence 899999999 8899888888887777 38999999999999999999999998775 889999
Q ss_pred HHHHHHHhcc--ceecCCCCHHHHHHHHHHHHHHHH
Q 044696 73 LTPLFEVLGK--PTFMGGAGCGQSCKIANQIVVGAN 106 (220)
Q Consensus 73 ~~~~l~~~~~--~~~~G~~G~a~~~Kl~~n~~~~~~ 106 (220)
++++|+.++. ++|+|+.|+|+.+|+++|++...+
T Consensus 196 v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~ 231 (245)
T 3dtt_A 196 VATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLW 231 (245)
T ss_dssp HHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHH
T ss_pred HHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHH
Confidence 9999999995 699999999999999999998655
No 42
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.31 E-value=1.3e-11 Score=110.62 Aligned_cols=170 Identities=15% Similarity=0.088 Sum_probs=128.3
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecC-CHHhHHHHHHHHHHhcc
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAG-DSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG-~~~~~~~~~~~l~~~~~ 82 (220)
.+|++||..||+.|.+++++...+-++...-+|-.|.-+|.-...|+. -+++|+ ++.+.+.++.+++.+..
T Consensus 135 ~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~ 214 (444)
T 3vtf_A 135 GRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDA 214 (444)
T ss_dssp CSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCS
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCC
Confidence 368999999999999999876554333222334445445544444432 245565 56677888999988877
Q ss_pred -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCC--Cchh
Q 044696 83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP--GGFA 159 (220)
Q Consensus 83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~ 159 (220)
++ +..+..|...|++.|.+...+++.+.|...+|++.|+|..++++.+.... ++-..-+.| +|.-
T Consensus 215 ~~~-~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~GiDv~eV~~a~~~d~-----------rig~~~l~PG~G~GG 282 (444)
T 3vtf_A 215 PKL-VMKPREAELVKYASNVFLALKISFANEVGLLAKRLGVDTYRVFEAVGLDK-----------RIGRHYFGAGLGFGG 282 (444)
T ss_dssp CEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TSCSTTCCCSSCCCT
T ss_pred CEE-EechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCC-----------CCCCCCCCCCCCCCC
Confidence 54 45667899999999999999999999999999999999999999987532 111111233 5677
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
.++-||.......+++. |++.++..++++.-+..
T Consensus 283 ~CipkD~~~L~~~a~~~----g~~~~li~a~~~iN~~~ 316 (444)
T 3vtf_A 283 SCFPKDTLAFIRFGESL----GLEMAISKAVLRVNEYM 316 (444)
T ss_dssp TTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHhc----CCCHHHHHhhHHHHHHH
Confidence 88999999999999999 99999999988776543
No 43
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.31 E-value=8.6e-13 Score=114.09 Aligned_cols=187 Identities=10% Similarity=-0.007 Sum_probs=124.8
Q ss_pred CCCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhh---ccceeEEecCCHHhHHHHHHHHHHhcc-ceecC
Q 044696 13 PGAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDIGAR---DGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMG 87 (220)
Q Consensus 13 ~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~---~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G 87 (220)
+++++|+++ +++|++.+.+++.+.+... .++++.++|..+. .|.+..++.|..+ +++++++|+..+. +++.+
T Consensus 103 ~~~~vv~~~nGi~~~~~~~l~~~~~~~~~--~~~~~~~~P~~~~~~~~g~~~~~~~g~~~-~~~~~~ll~~~g~~~~~~~ 179 (335)
T 1z82_A 103 KPSMVLNLSKGIEIKTGKRVSEIVEEILG--CPYAVLSGPSHAEEVAKKLPTAVTLAGEN-SKELQKRISTEYFRVYTCE 179 (335)
T ss_dssp CCSEEEECCCCCCTTTCCCHHHHHHHHTC--CCEEEEESSCCHHHHHTTCCEEEEEEETT-HHHHHHHHCCSSEEEEEES
T ss_pred CCCEEEEEeCCCCCCccCcHHHHHHHHcC--CceEEEECCccHHHHhCCCceEEEEEehh-HHHHHHHhCCCCEEEEecC
Confidence 789999999 6788777778877766432 4566666665443 6765444433333 7899999998887 76666
Q ss_pred CC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC----CChHHHHh--h
Q 044696 88 GA-----------------GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA----AGSMAMEL--Y 144 (220)
Q Consensus 88 ~~-----------------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~----~~s~~~~~--~ 144 (220)
+. |..+.+|+.+|.+......++.|++.++++.|++++++.++...+. ..++..++ .
T Consensus 180 di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~ 259 (335)
T 1z82_A 180 DVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRF 259 (335)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHH
T ss_pred chHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHH
Confidence 52 2223445667888888899999999999999999988765321000 00111111 1
Q ss_pred hhhhccccCCC------CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHH
Q 044696 145 GERMIEKDFRP------GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVI 214 (220)
Q Consensus 145 ~~~~~~~~~~~------~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~ 214 (220)
.+.+.++ +++ .++.....||++.+++.+++. |+++|+.+.+.++++ .+.+...+++.+
T Consensus 260 ~~~~~~g-~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~----gv~~P~~~~v~~~~~-------~~~~~~~~~~~l 323 (335)
T 1z82_A 260 GELIARG-FNPLKLLESSNQVVEGAFTVKAVMKIAKEN----KIDMPISEEVYRVVY-------EGKPPLQSMRDL 323 (335)
T ss_dssp HHHHHHT-CCHHHHHHTCSSCCTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHH-------SCCCHHHHHHHH
T ss_pred HHHHhCC-CCHHHHHHhcCCeeeHHHHHHHHHHHHHHh----CCCCcHHHHHHHHHh-------CCCCHHHHHHHH
Confidence 2333332 211 133345679999999999999 999999999998874 345666666554
No 44
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.29 E-value=4.9e-12 Score=108.64 Aligned_cols=176 Identities=10% Similarity=-0.095 Sum_probs=121.4
Q ss_pred hhhcCCCCCEEEecC-CC---CHHHHHHHHHHHHhc-CCcEEEecCCCChHHhh---ccc--eeEEecCCHHhHHHHHHH
Q 044696 7 IVSALNPGAVYVDTT-SS---HPALAREIFKVARER-DCWAVDAPVSGGDIGAR---DGK--LAIFAAGDSAVVQWLTPL 76 (220)
Q Consensus 7 i~~~~~~g~~ivd~S-T~---~p~~~~~la~~~~~~-G~~~ldapV~g~~~~a~---~g~--l~i~~gG~~~~~~~~~~~ 76 (220)
+.+ +.++++||+++ ++ .|...+.+++.+.+. |..+ +.++..+|..+. .|. ..++.+++++.+++++++
T Consensus 91 i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 168 (335)
T 1txg_A 91 ILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRE-RTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEI 168 (335)
T ss_dssp HTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGG-GEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHH
T ss_pred Hhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCC-cEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHH
Confidence 455 77899999998 55 566667777777663 5423 444444443332 233 344455578889999999
Q ss_pred HHHhcc-ceecCCC-----------------CHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-----
Q 044696 77 FEVLGK-PTFMGGA-----------------GCGQSCKIA-----NQIVVGANLLGLSEGLVFADEAGLDVRKWR----- 128 (220)
Q Consensus 77 l~~~~~-~~~~G~~-----------------G~a~~~Kl~-----~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~----- 128 (220)
|+..+. +++.++. |....+|+. +|.+...+..++.|++.++++.|+++++++
T Consensus 169 l~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~ 248 (335)
T 1txg_A 169 FETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGF 248 (335)
T ss_dssp HCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTH
T ss_pred hCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccch
Confidence 999888 7777775 334446877 888888889999999999999999998765
Q ss_pred -HHHhccCCChHHHHhhhhhhccccCCCCchh--------------hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHH
Q 044696 129 -DAVKGGAAGSMAMELYGERMIEKDFRPGGFA--------------EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQL 193 (220)
Q Consensus 129 -~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~--------------~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~ 193 (220)
+.+..+.. +... +... +|.++|++ ....||+.++++.+++. |+|+|+.+.+.++
T Consensus 249 ~~~~~~~~~-~~~~--~~~~----~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~----gv~~P~~~~~~~~ 317 (335)
T 1txg_A 249 GDLIATFRG-GRNG--MLGE----LLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKI----NADTKLLDSIYRV 317 (335)
T ss_dssp HHHHHTTTC-HHHH--HHHH----HHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHT----TCCCHHHHHHHHH
T ss_pred hheeecccc-CccH--HHHH----HHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHc----CCCCcHHHHHHHH
Confidence 55554332 2111 0111 12222322 23359999999999999 9999999999888
Q ss_pred HH
Q 044696 194 FS 195 (220)
Q Consensus 194 ~~ 195 (220)
++
T Consensus 318 ~~ 319 (335)
T 1txg_A 318 LY 319 (335)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 45
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.29 E-value=1.4e-12 Score=113.92 Aligned_cols=185 Identities=11% Similarity=-0.026 Sum_probs=122.2
Q ss_pred cchhhcCCC-CCEEEecC-CCCHHHHHHHHHHHHhc-CCcEEEecCCCChHHh---hcc--ceeEEecCCHHhHHHHHHH
Q 044696 5 DGIVSALNP-GAVYVDTT-SSHPALAREIFKVARER-DCWAVDAPVSGGDIGA---RDG--KLAIFAAGDSAVVQWLTPL 76 (220)
Q Consensus 5 ~gi~~~~~~-g~~ivd~S-T~~p~~~~~la~~~~~~-G~~~ldapV~g~~~~a---~~g--~l~i~~gG~~~~~~~~~~~ 76 (220)
+|+.+.+.+ +++||+++ +++|++.+.+++.+.+. |.+ +.++..+|..+ ..+ .+.++.+++++.+++++++
T Consensus 107 ~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~--~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~l 184 (366)
T 1evy_A 107 GNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSP--LLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRI 184 (366)
T ss_dssp HHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGG--GEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHH
T ss_pred HHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCC--cEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHH
Confidence 467777777 99999998 78887777777777654 432 23333333322 233 4556667788899999999
Q ss_pred HHHh--cc-ceecCCC---CHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC-
Q 044696 77 FEVL--GK-PTFMGGA---GCGQS--------------CKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA- 135 (220)
Q Consensus 77 l~~~--~~-~~~~G~~---G~a~~--------------~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~- 135 (220)
|+.+ +. +++.++. .-+.. +|+.+|.+......++.|++.++++.|++++++.++...+.
T Consensus 185 l~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~ 264 (366)
T 1evy_A 185 MSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDL 264 (366)
T ss_dssp HSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHH
T ss_pred hcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhh
Confidence 9998 66 6666663 23333 34557888888999999999999999999877654311000
Q ss_pred ---CChHHHHhh--hhhhcccc-CC----CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696 136 ---AGSMAMELY--GERMIEKD-FR----PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFS 195 (220)
Q Consensus 136 ---~~s~~~~~~--~~~~~~~~-~~----~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~ 195 (220)
..++..+++ .+.+.++. +. ..++.....||++.+++.+++. |+++|+.+.+.++++
T Consensus 265 ~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~----gv~~P~~~~v~~~~~ 330 (366)
T 1evy_A 265 QLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQL----KVKMPLCHQIYEIVY 330 (366)
T ss_dssp HHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHH
T ss_pred eeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHHHHHHh----CCCCcHHHHHHHHHH
Confidence 001111211 22333321 11 0123345679999999999999 999999999988876
No 46
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.26 E-value=1.5e-12 Score=111.02 Aligned_cols=179 Identities=17% Similarity=0.034 Sum_probs=117.9
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCC--hHHhhccceeEE----ecCCHHhHHHHHHH
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARE----RDCWAVDAPVSGG--DIGARDGKLAIF----AAGDSAVVQWLTPL 76 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~--~~~a~~g~l~i~----~gG~~~~~~~~~~~ 76 (220)
+.+.+.++++||++++. +...+.+.+.+.+ +|..++++++++. ...+..|++.++ -+++.+.+ ++.++
T Consensus 103 i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~l 180 (317)
T 2qyt_A 103 IRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELFYFGSGLPEQTDDEV-RLAEL 180 (317)
T ss_dssp HGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEEEEECCSSSCCHHHH-HHHHH
T ss_pred HHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceEEEcCCCCCCcCHHH-HHHHH
Confidence 44556678899998664 5555666666654 5677899999852 334455554433 22346777 89999
Q ss_pred HHHhcc-ceecCCCCHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHcCCCHH--HHHHHHhcc
Q 044696 77 FEVLGK-PTFMGGAGCGQSCKIANQIVVG-------------------ANLLGLSEGLVFADEAGLDVR--KWRDAVKGG 134 (220)
Q Consensus 77 l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~-------------------~~~~~~aEa~~la~~~Gl~~~--~~~~~l~~~ 134 (220)
|+..+. +++.++++.+...|++.|.++. .+..++.|++.++++.|++++ .+.+.+...
T Consensus 181 l~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~ 260 (317)
T 2qyt_A 181 LTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQ 260 (317)
T ss_dssp HHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHH
T ss_pred HHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH
Confidence 999998 8888999999999999998764 345899999999999999974 667776542
Q ss_pred CCChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696 135 AAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA 196 (220)
Q Consensus 135 ~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~ 196 (220)
. .......+.|. .|+..++..+.. ..+..+++.+++. |+++|+.+.+.++++.
T Consensus 261 ~---~~~~~~~~sm~-~d~~~g~~~E~~-~~~g~~~~~a~~~----gv~~P~~~~~~~~~~~ 313 (317)
T 2qyt_A 261 R---KMPPESTSSMH-SDFLQGGSTEVE-TLTGYVVREAEAL----RVDLPMYKRMYRELVS 313 (317)
T ss_dssp H---HC---------------------C-TTTHHHHHHHHHT----TCCCHHHHHHHHTTCC
T ss_pred h---ccCCCCCChHH-HHHHcCCccCHH-HHhhHHHHHHHHc----CCCCCHHHHHHHHHHH
Confidence 1 11122233344 255544432211 1278999999999 9999999999887653
No 47
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.24 E-value=6.9e-12 Score=107.00 Aligned_cols=112 Identities=20% Similarity=0.150 Sum_probs=88.3
Q ss_pred hhcCCCCCEEE-ecCCCCHHHHHHHH-HHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc
Q 044696 8 VSALNPGAVYV-DTTSSHPALAREIF-KVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 8 ~~~~~~g~~iv-d~ST~~p~~~~~la-~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~ 82 (220)
+..+ ++++++ |+||++|+...+.. ...+..|.+|+| |+.++ .+..++.| +++++++++++++.+|+
T Consensus 95 l~~~-~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~~-------~lveiv~g~~t~~~~~~~~~~l~~~lGk 165 (293)
T 1zej_A 95 VERL-TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHVM-------PLVEIVISRFTDSKTVAFVEGFLRELGK 165 (293)
T ss_dssp HHTT-CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTTC-------CEEEEEECTTCCHHHHHHHHHHHHHTTC
T ss_pred HhcC-CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-ccccC-------CEEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 3445 898884 89999998665432 233356999999 77553 46656655 89999999999999999
Q ss_pred -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH
Q 044696 83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM 139 (220)
Q Consensus 83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~ 139 (220)
++++|+. |++||++. ..+.|++.++++ |+|++++.++++.+.+.++
T Consensus 166 ~~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~ 212 (293)
T 1zej_A 166 EVVVCKGQ------SLVNRFNA----AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLY 212 (293)
T ss_dssp EEEEEESS------CHHHHHHH----HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHH
T ss_pred eEEEeccc------ccHHHHHH----HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCC
Confidence 9999975 88998876 479999999999 9999999999987654443
No 48
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.19 E-value=1.3e-10 Score=99.99 Aligned_cols=186 Identities=13% Similarity=0.052 Sum_probs=120.6
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEEecCCCChHHhhccceeEEecCC---HHhHHHHHHHHHHh
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCWAVDAPVSGGDIGARDGKLAIFAAGD---SAVVQWLTPLFEVL 80 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~---~~~~~~~~~~l~~~ 80 (220)
++.+.+.++++||++++..+. .++++++.+. +.+++-+ +...|.....|. .++++|+ ++.+++++++|+.+
T Consensus 103 ~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~vv~~-~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~~ll~~~ 178 (322)
T 2izz_A 103 EIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPRVIRC-MTNTPVVVREGA-TVYATGTHAQVEDGRLMEQLLSSV 178 (322)
T ss_dssp HHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCEEEEE-ECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTT
T ss_pred HHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCeEEEE-eCCcHHHHcCCe-EEEEeCCCCCHHHHHHHHHHHHhC
Confidence 355567789999999765442 2466666653 3444444 445555566665 7888888 78899999999999
Q ss_pred ccceecCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHh--hhhhhccccC-C
Q 044696 81 GKPTFMGGAGCGQSCKIA--NQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMEL--YGERMIEKDF-R 154 (220)
Q Consensus 81 ~~~~~~G~~G~a~~~Kl~--~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~--~~~~~~~~~~-~ 154 (220)
|..+++.+........+. .|.+++..+.+++|+ +++.|+|++.+++++..+...++ ++.. ..|.++.+.+ +
T Consensus 179 G~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~~l~~~v~s 255 (322)
T 2izz_A 179 GFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSS 255 (322)
T ss_dssp EEEEECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCC
T ss_pred CCEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCC
Confidence 983345553334444443 344444445555554 58899999999999987665554 3332 2455554443 6
Q ss_pred CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHH
Q 044696 155 PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQG 209 (220)
Q Consensus 155 ~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~a 209 (220)
|++++.. .++.+++. |++.++.+++.+.|+++.+.|.+++..+.
T Consensus 256 p~g~t~~-------~l~~l~~~----g~~~~~~~av~~~~~ra~e~~~~~~~~~~ 299 (322)
T 2izz_A 256 PGGATIH-------ALHVLESG----GFRSLLINAVEASCIRTRELQSMADQEQV 299 (322)
T ss_dssp TTSHHHH-------HHHHHHHT----THHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CCcHHHH-------HHHHHHHC----CHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 6665443 33456778 99999999999999999998876544433
No 49
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.18 E-value=6.6e-11 Score=103.49 Aligned_cols=194 Identities=11% Similarity=0.010 Sum_probs=137.0
Q ss_pred chhhcCCCCCEEEecCC-CCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 6 GIVSALNPGAVYVDTTS-SHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST-~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.+.++++++||++++ +.|++ +.+.+.+++ ..+.++.+|........+..+..++.+.+++..++++++|+..
T Consensus 118 ~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~ 196 (356)
T 3k96_A 118 RMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQ 196 (356)
T ss_dssp HHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCS
T ss_pred HHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCC
Confidence 35567788999999877 66665 544444443 4567889998877666666677778888999999999999987
Q ss_pred cc-ceecCCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH------HhccCC
Q 044696 81 GK-PTFMGGA-----------------GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDA------VKGGAA 136 (220)
Q Consensus 81 ~~-~~~~G~~-----------------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~------l~~~~~ 136 (220)
+- +++..++ |.+..+|+.+|...+....++.|+..++++.|.+++++++. +....
T Consensus 197 ~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~- 275 (356)
T 3k96_A 197 RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCT- 275 (356)
T ss_dssp SEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHH-
T ss_pred CeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhcc-
Confidence 76 6555552 45556788899999999999999999999999999998743 22211
Q ss_pred ChHHHHhh--hhhhccccCCCC------chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChH
Q 044696 137 GSMAMELY--GERMIEKDFRPG------GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQ 208 (220)
Q Consensus 137 ~s~~~~~~--~~~~~~~~~~~~------f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~ 208 (220)
|+..+++ +..+.+| ++.. ..+....++.+.+.+.+++. |+++|+.+.+.+++. ++.+..
T Consensus 276 -s~~sRN~~~G~~l~~g-~~~~~~~~~~~~~~eG~~t~~~~~~la~~~----~v~~Pi~~~v~~il~-------~~~~~~ 342 (356)
T 3k96_A 276 -DNQSRNRRFGLALGEG-VDKKEAQQAIGQAIEGLYNTDQVHALAQKH----AIEMPLTFQVHRILH-------EDLDPQ 342 (356)
T ss_dssp -CTTCHHHHHHHHHHHT-CCHHHHHHHHCSCCSHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHH-------SCCCHH
T ss_pred -CCCCccHHHHHHHHCC-CCHHHHHHHcCCccchHHHHHHHHHHHHHc----CCCCcHHHHHHHHHh-------CCCCHH
Confidence 1222222 2233333 1110 23445678999999999999 999999999988874 455555
Q ss_pred HHHHHH
Q 044696 209 GLVSVI 214 (220)
Q Consensus 209 av~~~~ 214 (220)
..++.+
T Consensus 343 ~~~~~l 348 (356)
T 3k96_A 343 QAVQEL 348 (356)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 544443
No 50
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.14 E-value=9.6e-11 Score=98.94 Aligned_cols=125 Identities=13% Similarity=0.062 Sum_probs=101.2
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE-EecCCCCh------HHhhccce-------e--EEecCCHHh
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAV-DAPVSGGD------IGARDGKL-------A--IFAAGDSAV 69 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l-dapV~g~~------~~a~~g~l-------~--i~~gG~~~~ 69 (220)
.+.+.++++++|||+||..|.... .+ + ..|.+|+ +.|++|++ ..+..|.+ . +..+++++.
T Consensus 86 ~l~~~l~~~~ivv~~s~~~~~~~l--~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~ 161 (286)
T 3c24_A 86 DIVPRVRPGTIVLILDAAAPYAGV--MP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEH 161 (286)
T ss_dssp HHGGGSCTTCEEEESCSHHHHHTC--SC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHH
T ss_pred HHHHhCCCCCEEEECCCCchhHHH--Hh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHH
Confidence 355667889999999998865443 23 2 3478899 99999988 66777742 2 346789999
Q ss_pred HHHHHHHHHHhcc----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHhcc
Q 044696 70 VQWLTPLFEVLGK----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA-GLDVRKWRDAVKGG 134 (220)
Q Consensus 70 ~~~~~~~l~~~~~----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~-Gl~~~~~~~~l~~~ 134 (220)
+++++++|+.+|. ++++++.+.+...|.++|.....++..++|++..+.+. |+|++++++++..+
T Consensus 162 ~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~ 231 (286)
T 3c24_A 162 YAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGH 231 (286)
T ss_dssp HHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 9999999999996 78899888888889999988889999999999877665 99999999998764
No 51
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.13 E-value=5.9e-10 Score=92.56 Aligned_cols=175 Identities=13% Similarity=0.091 Sum_probs=118.2
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhccc
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGKP 83 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~~ 83 (220)
+.+.++++.++.++++++++..+ +.+.+ +.+++- -+.+.|.....| ++++++| +++.+++++++|+.+|.+
T Consensus 78 l~~~l~~~~vv~~~~gi~~~~l~---~~~~~-~~~~v~-~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~ 151 (262)
T 2rcy_A 78 IKPYLSSKLLISICGGLNIGKLE---EMVGS-ENKIVW-VMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGII 151 (262)
T ss_dssp SGGGCTTCEEEECCSSCCHHHHH---HHHCT-TSEEEE-EECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEE
T ss_pred HHHhcCCCEEEEECCCCCHHHHH---HHhCC-CCcEEE-ECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCE
Confidence 44555455678889999997443 34433 323321 112334444467 7778777 688899999999999887
Q ss_pred eecCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHH---hhhhhhccccC-CCCc
Q 044696 84 TFMGGAGCGQSCKI--ANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAME---LYGERMIEKDF-RPGG 157 (220)
Q Consensus 84 ~~~G~~G~a~~~Kl--~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~---~~~~~~~~~~~-~~~f 157 (220)
+++++......+++ +.|.+++..+.+++|+ +++.|++++.+++++..+...+..+. ...|.+..+.+ .+++
T Consensus 152 ~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~ 228 (262)
T 2rcy_A 152 HEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGG 228 (262)
T ss_dssp EECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTS
T ss_pred EEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCCh
Confidence 88887655555555 4466666666666655 68999999999999887544443222 34567777666 4667
Q ss_pred hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696 158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG 201 (220)
Q Consensus 158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G 201 (220)
+.....+++ ++. |++.++.+++.+.|+++.+.+
T Consensus 229 t~~~~l~~l-------~~~----~~~~~~~~a~~~~~~r~~~~~ 261 (262)
T 2rcy_A 229 ITAVGLYSL-------EKN----SFKYTVMNAVEAACEKSKAMG 261 (262)
T ss_dssp HHHHHHHHH-------HHT----THHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHH-------HHC----ChHHHHHHHHHHHHHHHHHhc
Confidence 655554444 666 888899999999999988754
No 52
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.10 E-value=2.1e-11 Score=101.79 Aligned_cols=122 Identities=12% Similarity=0.052 Sum_probs=93.3
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEe-cCCHHhHHHHHHHHHHhcc-ce
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA-AGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~-gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
+.+.++++++||++||..|.+. +++.+.+.+..|.++|++|++.. ..+.+.+++ +++++.+++++++|+.+|. ++
T Consensus 88 l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~~ 164 (266)
T 3d1l_A 88 IVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREV-DFKEIPFFIEASSTEDAAFLKAIASTLSNRVY 164 (266)
T ss_dssp HHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCC-CCTTCCEEEEESSHHHHHHHHHHHHTTCSCEE
T ss_pred HHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchh-hcCCCeEEEecCCHHHHHHHHHHHHhcCCcEE
Confidence 4456678999999999988543 55555545777899999986543 345556666 8899999999999999998 99
Q ss_pred ecCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696 85 FMGGAG---CGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA 135 (220)
Q Consensus 85 ~~G~~G---~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~ 135 (220)
++++.+ ....+|+++|+. .++..++|+ ++++.|+|++.+.+++..+.
T Consensus 165 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~ 214 (266)
T 3d1l_A 165 DADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLKKYNLPFDVMLPLIDETA 214 (266)
T ss_dssp ECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHTTCCGGGGHHHHHHHH
T ss_pred EeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHcCCCHHHHHHHHHHHH
Confidence 999754 568899999973 456777786 66899999999999998754
No 53
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.07 E-value=1.3e-10 Score=100.65 Aligned_cols=180 Identities=14% Similarity=0.038 Sum_probs=118.2
Q ss_pred hhhcCCCCCEEEecCC-CC--HHHHHHHHHHHHhc-CCcEEEecCCCChHHhh---cc--ceeEEecCCHHhHHHHHHHH
Q 044696 7 IVSALNPGAVYVDTTS-SH--PALAREIFKVARER-DCWAVDAPVSGGDIGAR---DG--KLAIFAAGDSAVVQWLTPLF 77 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST-~~--p~~~~~la~~~~~~-G~~~ldapV~g~~~~a~---~g--~l~i~~gG~~~~~~~~~~~l 77 (220)
+.+.+.++++||++++ ++ |++.+.+++.+.+. | .++++..+|..+. .| ...++.+++++.+++++++|
T Consensus 110 i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll 186 (354)
T 1x0v_A 110 LKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELM 186 (354)
T ss_dssp HTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHh
Confidence 4556778999999987 44 34334444444432 3 2455655554332 34 34556677888899999999
Q ss_pred HHhcc-ceecCCCC---HHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHH------H
Q 044696 78 EVLGK-PTFMGGAG---CGQSC--------------KIANQIVVGANLLGLSEGLVFADEAGL---DVRKWRD------A 130 (220)
Q Consensus 78 ~~~~~-~~~~G~~G---~a~~~--------------Kl~~n~~~~~~~~~~aEa~~la~~~Gl---~~~~~~~------~ 130 (220)
+..+. +++.++.- -+..+ |+.+|........++.|++.++++.|+ +++++.+ .
T Consensus 187 ~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~ 266 (354)
T 1x0v_A 187 QTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADL 266 (354)
T ss_dssp CBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHH
T ss_pred CCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHH
Confidence 99887 77777642 33333 333787878889999999999999999 8877643 2
Q ss_pred HhccCCChHHHHhhhhhhccccCCC--------CchhhHHHHHHHHHHHHHhhcccCCCC--CccHHHHHHHHHH
Q 044696 131 VKGGAAGSMAMELYGERMIEKDFRP--------GGFAEYMVKDMGMGVDVVEESEDERVV--VLPGAALGKQLFS 195 (220)
Q Consensus 131 l~~~~~~s~~~~~~~~~~~~~~~~~--------~f~~~~~~KD~~~~~~~a~~~~~~~g~--~~p~~~~~~~~~~ 195 (220)
+..... +... ...+.+.++.++. .+......||+..+++.+++. |+ ++|+.+.+.+++.
T Consensus 267 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~----gv~~~~P~~~~v~~~~~ 335 (354)
T 1x0v_A 267 ITTCYG-GRNR-KVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHK----GLVDKFPLFMAVYKVCY 335 (354)
T ss_dssp HHHHHH-CHHH-HHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHH----TCGGGSHHHHHHHHHHH
T ss_pred HHhhcc-cccH-HHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHh----CCCCCCCHHHHHHHHHh
Confidence 222111 1111 1233443311211 144556789999999999999 99 9999999988875
No 54
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.01 E-value=1.2e-09 Score=95.63 Aligned_cols=177 Identities=8% Similarity=-0.026 Sum_probs=117.8
Q ss_pred cCCCCCEEEecCC-CCH--HHHHHHHHHHHhcCCcEEEecCCCChHHhh-----ccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 10 ALNPGAVYVDTTS-SHP--ALAREIFKVARERDCWAVDAPVSGGDIGAR-----DGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 10 ~~~~g~~ivd~ST-~~p--~~~~~la~~~~~~G~~~ldapV~g~~~~a~-----~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.+++++|++++ ++| ++.+.+++.+.+... .++++..+|..+. ...+.++.+++++.+++++++|+..+
T Consensus 130 ~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~--~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g 207 (375)
T 1yj8_A 130 KIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN--IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPY 207 (375)
T ss_dssp CCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS--SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTT
T ss_pred cCCCCCEEEEeCCccccCCccccCHHHHHHHHcC--CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCC
Confidence 5678999999984 566 233444444443211 2455555554332 34456667788889999999999988
Q ss_pred c-ceecCCC---CHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHc--CCCHHHHHH------HHhccC
Q 044696 82 K-PTFMGGA---GCGQSC--------------KIANQIVVGANLLGLSEGLVFADEA--GLDVRKWRD------AVKGGA 135 (220)
Q Consensus 82 ~-~~~~G~~---G~a~~~--------------Kl~~n~~~~~~~~~~aEa~~la~~~--Gl~~~~~~~------~l~~~~ 135 (220)
. +++.+++ .-+..+ |+.+|........++.|++.++++. |++++++.+ ++....
T Consensus 208 ~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~ 287 (375)
T 1yj8_A 208 FKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFL 287 (375)
T ss_dssp EEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHS
T ss_pred eEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeee
Confidence 7 7777774 233333 4447888888999999999999999 699877743 233222
Q ss_pred C-ChHHHHhhhhhhcc-cc-CCCC--------chhhHHHHHHHHHHHHHhhcccCCCC--CccHHHHHHHHHH
Q 044696 136 A-GSMAMELYGERMIE-KD-FRPG--------GFAEYMVKDMGMGVDVVEESEDERVV--VLPGAALGKQLFS 195 (220)
Q Consensus 136 ~-~s~~~~~~~~~~~~-~~-~~~~--------f~~~~~~KD~~~~~~~a~~~~~~~g~--~~p~~~~~~~~~~ 195 (220)
. .++. ..+.+.+ ++ ++.+ ++.....||+..+.+.+++. |+ ++|+.+.+.+++.
T Consensus 288 ~~~~~~---~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~~----gv~~~~P~~~~v~~~~~ 353 (375)
T 1yj8_A 288 AGRNAK---CSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKEK----NMTNEFPLFTVLHKISF 353 (375)
T ss_dssp SSSHHH---HHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT----TCGGGCHHHHHHHHHHH
T ss_pred CCccHH---HHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHHh----CCCCCCCHHHHHHHHHh
Confidence 1 1111 1333333 21 2111 45567789999999999999 99 9999999988865
No 55
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.93 E-value=1e-09 Score=94.91 Aligned_cols=187 Identities=14% Similarity=0.058 Sum_probs=114.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcC---CcEEE---ecCCCChHHhhccceeEEe------------cCCH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERD---CWAVD---APVSGGDIGARDGKLAIFA------------AGDS 67 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G---~~~ld---apV~g~~~~a~~g~l~i~~------------gG~~ 67 (220)
.+.+.+.++++||++.++.+.. .++.+.+.+.| +.|+| +|+.+...+ .+.+.++. ++++
T Consensus 94 ~l~~~l~~~~~vv~~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~g--pg~v~~~~~~~~~~~g~~~~~~~~ 170 (359)
T 1bg6_A 94 NIASYISEGQLIILNPGATGGA-LEFRKILRENGAPEVTIGETSSMLFTCRSER--PGQVTVNAIKGAMDFACLPAAKAG 170 (359)
T ss_dssp HHGGGCCTTCEEEESSCCSSHH-HHHHHHHHHTTCCCCEEEEESSCSEEEECSS--TTEEEEEEECSCEEEEEESGGGHH
T ss_pred HHHHhCCCCCEEEEcCCCchHH-HHHHHHHHhcCCCCeEEEEecCCcEEEEeCC--CCEEEEEEeecceEEEeccccccH
Confidence 3556788899999996656543 34566666665 56787 676654222 23333322 3455
Q ss_pred HhHHHHHHHHHHhc--c-c-----------eecCC--CCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHcC
Q 044696 68 AVVQWLTPLFEVLG--K-P-----------TFMGG--AGCGQSCKIANQI----------VVGANLLGLSEGLVFADEAG 121 (220)
Q Consensus 68 ~~~~~~~~~l~~~~--~-~-----------~~~G~--~G~a~~~Kl~~n~----------~~~~~~~~~aEa~~la~~~G 121 (220)
+.+++++++|..+. . + ++.+. .+.+...| ++|+ .......++.|++.++++.|
T Consensus 171 ~~~~~l~~~~~~~~~~~di~~k~~~nvn~~~n~~~al~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G 249 (359)
T 1bg6_A 171 WALEQIGSVLPQYVAVENVLHTSLTNVNAVMHPLPTLLNAARCES-GTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFD 249 (359)
T ss_dssp HHHHHHTTTCTTEEECSCHHHHHHCCHHHHHTHHHHHTTHHHHHT-TCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHhhhcEEcCChHhhhccCCCccccHHHHHhhhchhhc-CCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 56777788776553 1 1 11111 13444333 2222 34567888999999999999
Q ss_pred CCHHHHHHHHhccCCChHH--HHh-hhhhhccccCCC-CchhhHHHHHH----HHHHHHHhhcccCCCCCccHHHHHHHH
Q 044696 122 LDVRKWRDAVKGGAAGSMA--MEL-YGERMIEKDFRP-GGFAEYMVKDM----GMGVDVVEESEDERVVVLPGAALGKQL 193 (220)
Q Consensus 122 l~~~~~~~~l~~~~~~s~~--~~~-~~~~~~~~~~~~-~f~~~~~~KD~----~~~~~~a~~~~~~~g~~~p~~~~~~~~ 193 (220)
++++.+.+.+......++. .+. ..+.|..+...| .+....+.||+ ..+++.+++. |+|+|+.+.+.++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D~~~~~g~~~~~a~~~----gv~~P~~~~l~~~ 325 (359)
T 1bg6_A 250 LNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFEDVSTGLVPLSELGRAV----NVPTPLIDAVLDL 325 (359)
T ss_dssp CCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHHHHTTHHHHHHHHHHT----TCCCHHHHHHHHH
T ss_pred CCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecCcCccHHHHHHHHHHc----CCCchHHHHHHHH
Confidence 9998888887654332221 111 123344433323 23444889998 7899999999 9999999999999
Q ss_pred HHHHHHC
Q 044696 194 FSAMVAN 200 (220)
Q Consensus 194 ~~~a~~~ 200 (220)
++.....
T Consensus 326 ~~~~~~~ 332 (359)
T 1bg6_A 326 ISSLIDT 332 (359)
T ss_dssp HHHHTTC
T ss_pred HHHHHCC
Confidence 9876655
No 56
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.80 E-value=2.1e-08 Score=86.30 Aligned_cols=115 Identities=15% Similarity=0.131 Sum_probs=84.3
Q ss_pred hhhcCCCCCEEEe-cCCCCHHHHHHHHHHHH----hcCCcEEEecCCCChHHhhccceeEEec--CCHHhHHHHHHHHHH
Q 044696 7 IVSALNPGAVYVD-TTSSHPALAREIFKVAR----ERDCWAVDAPVSGGDIGARDGKLAIFAA--GDSAVVQWLTPLFEV 79 (220)
Q Consensus 7 i~~~~~~g~~ivd-~ST~~p~~~~~la~~~~----~~G~~~ldapV~g~~~~a~~g~l~i~~g--G~~~~~~~~~~~l~~ 79 (220)
+.+.++++++|++ +||++++ ++++.+. -.|.||++.| .. .+.+.++.| ++++++++++++++.
T Consensus 109 l~~~~~~~~Ii~s~tS~i~~~---~la~~~~~~~r~ig~Hp~~P~-~~------~~lveiv~g~~t~~e~~~~~~~l~~~ 178 (319)
T 2dpo_A 109 LDSIVDDRVVLSSSSSCLLPS---KLFTGLAHVKQCIVAHPVNPP-YY------IPLVELVPHPETSPATVDRTHALMRK 178 (319)
T ss_dssp HHTTCCSSSEEEECCSSCCHH---HHHTTCTTGGGEEEEEECSST-TT------CCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHhhCCCCeEEEEeCCChHHH---HHHHhcCCCCCeEEeecCCch-hh------cceEEEeCCCCCCHHHHHHHHHHHHH
Confidence 5567789999874 4666664 4444442 2477888744 21 123445555 688999999999999
Q ss_pred hcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCCh
Q 044696 80 LGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGS 138 (220)
Q Consensus 80 ~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s 138 (220)
+|+ ++++|+.+.|. ++||++. ..+.|++.++++.++|++++.++++.+.+.+
T Consensus 179 lGk~~v~v~~~~~Gf---i~Nrll~----a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~ 231 (319)
T 2dpo_A 179 IGQSPVRVLKEIDGF---VLNRLQY----AIISEAWRLVEEGIVSPSDLDLVMSDGLGMR 231 (319)
T ss_dssp TTCEEEECSSCCTTT---THHHHHH----HHHHHHHHHHHTTSSCHHHHHHHHHTTHHHH
T ss_pred cCCEEEEECCCcCCc---hHHHHHH----HHHHHHHHHHHhCCCCHHHHHHHHHhCCCCC
Confidence 999 99998655554 5777765 3689999999999999999999999765544
No 57
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.79 E-value=8.1e-09 Score=82.95 Aligned_cols=93 Identities=12% Similarity=0.110 Sum_probs=77.8
Q ss_pred CCCEEEecCC-CC-----------HHHHHHHHHHHHhcCCcEEEe--cCCCChHHh--hccceeEEecCC-HHhHHHHHH
Q 044696 13 PGAVYVDTTS-SH-----------PALAREIFKVARERDCWAVDA--PVSGGDIGA--RDGKLAIFAAGD-SAVVQWLTP 75 (220)
Q Consensus 13 ~g~~ivd~ST-~~-----------p~~~~~la~~~~~~G~~~lda--pV~g~~~~a--~~g~l~i~~gG~-~~~~~~~~~ 75 (220)
+++++||+++ ++ |...+++++.+. +.+|+++ |+.+..... ..+.++++++|+ ++.++++++
T Consensus 89 ~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~ 166 (212)
T 1jay_A 89 REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMS 166 (212)
T ss_dssp TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHH
Confidence 5899999998 33 345778887775 5789999 877766655 778899999997 889999999
Q ss_pred HHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHH
Q 044696 76 LFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANL 107 (220)
Q Consensus 76 ~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~ 107 (220)
+|+.+ |. ++++|+.+.++.+|+++|++...+.
T Consensus 167 l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~ 200 (212)
T 1jay_A 167 LISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR 200 (212)
T ss_dssp HHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred HHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence 99999 99 9999999999999999998886543
No 58
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.77 E-value=5.7e-09 Score=94.67 Aligned_cols=108 Identities=25% Similarity=0.236 Sum_probs=88.0
Q ss_pred hhhcCCCCCEE-EecCCCCHHHHHHHHHHH----HhcCCcEEE-ecCCCChHHhhccceeEEecC---CHHhHHHHHHHH
Q 044696 7 IVSALNPGAVY-VDTTSSHPALAREIFKVA----RERDCWAVD-APVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLF 77 (220)
Q Consensus 7 i~~~~~~g~~i-vd~ST~~p~~~~~la~~~----~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l 77 (220)
+.+.+++++++ .|+||++++. +++.+ +-.|.+|.+ +|++ +++.+++| ++++++++++++
T Consensus 106 l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf~~Pa~v~---------~Lvevv~g~~Ts~e~~~~~~~l~ 173 (483)
T 3mog_A 106 LAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHFFNPAPVM---------KLVEVVSGLATAAEVVEQLCELT 173 (483)
T ss_dssp HHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEECSSTTTC---------CEEEEEECSSCCHHHHHHHHHHH
T ss_pred HHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeeecChhhhC---------CeEEEecCCCCCHHHHHHHHHHH
Confidence 45567889988 5899999973 33333 224777877 5665 78899999 789999999999
Q ss_pred HHhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696 78 EVLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA 135 (220)
Q Consensus 78 ~~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~ 135 (220)
+.+|+ ++++|+ +| |++||++.. .+.|++.++++.+.|++++-+++..+.
T Consensus 174 ~~lGk~~v~v~d~~G-----fi~Nr~l~~----~~~Ea~~l~~~g~~~~~~id~a~~~~~ 224 (483)
T 3mog_A 174 LSWGKQPVRCHSTPG-----FIVNRVARP----YYSEAWRALEEQVAAPEVIDAALRDGA 224 (483)
T ss_dssp HHTTCEEEEEESCTT-----TTHHHHTHH----HHHHHHHHHHTTCSCHHHHHHHHHHTT
T ss_pred HHhCCEEEEEeccCc-----chHHHHHHH----HHHHHHHHHHhCCCCHHHHHHHHHhcC
Confidence 99999 999997 55 889997776 689999999999999999999998543
No 59
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=98.69 E-value=3.9e-08 Score=82.58 Aligned_cols=114 Identities=15% Similarity=0.030 Sum_probs=82.8
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhh-ccceeEEecCCHHhHHHHHHHHHHhcc-ceecCCC
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGAR-DGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMGGA 89 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~-~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G~~ 89 (220)
.++++||++|+..|.+..+ +. ..+..+.++|++|+|..++ ...++++++|+++.++.++++|+.+|. ++++++.
T Consensus 80 ~~~~ivi~~s~~~~~~~l~--~~--~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~~~ 155 (276)
T 2i76_A 80 LGDAVLVHCSGFLSSEIFK--KS--GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSE 155 (276)
T ss_dssp CSSCCEEECCSSSCGGGGC--SS--SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCGG
T ss_pred cCCCEEEECCCCCcHHHHH--Hh--hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEECHH
Confidence 5789999999887764321 11 2234456778888776665 577788999999999999999999998 9999975
Q ss_pred CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHhc
Q 044696 90 GC---GQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR--KWRDAVKG 133 (220)
Q Consensus 90 G~---a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~--~~~~~l~~ 133 (220)
+. -...++++|++. ..+.|+..++++.|++.+ .+.+++..
T Consensus 156 ~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~Gl~~~~a~~~~l~~~ 200 (276)
T 2i76_A 156 KKKAYHLAAVIASNFPV----ALAYLSKRIYTLLGLDEPELLIHTLMKG 200 (276)
T ss_dssp GHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 43 355688888554 356778889999999988 55555553
No 60
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.53 E-value=7.6e-07 Score=74.32 Aligned_cols=118 Identities=17% Similarity=0.186 Sum_probs=84.3
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCC----hHHhh----ccceeEEec---CCHHhHHHHH
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGG----DIGAR----DGKLAIFAA---GDSAVVQWLT 74 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~----~~~a~----~g~l~i~~g---G~~~~~~~~~ 74 (220)
+.+.++++++||+++++.+...+++.+.+ .+|+.+ |+.|+ |..+. .+..++++. ++++.+++++
T Consensus 77 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~ 152 (279)
T 2f1k_A 77 LIPHLSPTAIVTDVASVKTAIAEPASQLW----SGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLR 152 (279)
T ss_dssp HGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHH
T ss_pred HHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHH
Confidence 45667889999999999998777666543 278888 88753 43332 455666663 5788999999
Q ss_pred HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHh
Q 044696 75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD--VRKWRDAVK 132 (220)
Q Consensus 75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~--~~~~~~~l~ 132 (220)
++|+.++. ++++++......+|+++|...+... ++.+++ .+.|++ .+....++.
T Consensus 153 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~~---~~~~~~~~~~~~~~l~~ 209 (279)
T 2f1k_A 153 SVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA-ALIQAC---AGEKDGDILKLAQNLAS 209 (279)
T ss_dssp HHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHHH---HTCSCHHHHHHHHHHCC
T ss_pred HHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH-HHHHHH---HhcccccchhHHHhhcC
Confidence 99999998 9999988889999999997444333 555543 356665 455555443
No 61
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=97.89 E-value=1.4e-08 Score=81.81 Aligned_cols=83 Identities=17% Similarity=0.204 Sum_probs=67.6
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChH----------Hhhccce-----eEEecCCHHhHHHHHH
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDI----------GARDGKL-----AIFAAGDSAVVQWLTP 75 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~----------~a~~g~l-----~i~~gG~~~~~~~~~~ 75 (220)
+.++++|||+++..|... +.+.+..++++|+.+.+. ..+.|.+ .+++|++++.++++++
T Consensus 95 ~~~~~ivI~~~~G~~~~~------~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~ 168 (201)
T 2yjz_A 95 SLKGRVLIDVSNNQKMNQ------YPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMD 168 (201)
Confidence 457899999999998654 345567888888877644 4445664 7888999999999999
Q ss_pred HHHHhcc-ceecCCCCHHHHHHHHH
Q 044696 76 LFEVLGK-PTFMGGAGCGQSCKIAN 99 (220)
Q Consensus 76 ~l~~~~~-~~~~G~~G~a~~~Kl~~ 99 (220)
+|+.+|. ++|+|+.|+|+.+|.+-
T Consensus 169 ll~~~G~~~~~~G~l~~a~~~e~~~ 193 (201)
T 2yjz_A 169 IARTLGLTPLDQGSLVAAKEIENYP 193 (201)
Confidence 9999999 99999999999999763
No 62
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.49 E-value=2.1e-07 Score=83.81 Aligned_cols=107 Identities=15% Similarity=0.137 Sum_probs=81.4
Q ss_pred hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHH----hcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696 7 IVSALNPGAVYV-DTTSSHPALAREIFKVAR----ERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE 78 (220)
Q Consensus 7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~----~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~ 78 (220)
+.+.++++++++ ++||+++.. +++.+. -.|.+|++ |+. ...|+-++.| +++++++++++++
T Consensus 152 l~~~~~~~aIlasnTSsl~i~~---ia~~~~~p~r~iG~Hffn-Pv~-------~m~LvEIv~g~~Ts~e~~~~~~~l~~ 220 (460)
T 3k6j_A 152 LENICKSTCIFGTNTSSLDLNE---ISSVLRDPSNLVGIHFFN-PAN-------VIRLVEIIYGSHTSSQAIATAFQACE 220 (460)
T ss_dssp HHTTSCTTCEEEECCSSSCHHH---HHTTSSSGGGEEEEECCS-STT-------TCCEEEEECCSSCCHHHHHHHHHHHH
T ss_pred HHhhCCCCCEEEecCCChhHHH---HHHhccCCcceEEEEecc-hhh-------hCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 556788999986 577777754 444332 24778877 654 3456666665 7899999999999
Q ss_pred Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Q 044696 79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG 133 (220)
Q Consensus 79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~ 133 (220)
.+|+ ++++++ +| .++|+++.. .+.|++.++++.|+|++++-+++..
T Consensus 221 ~lGk~~v~v~d~pG-----fi~Nril~~----~~~EA~~l~~~~Ga~~e~ID~a~~~ 268 (460)
T 3k6j_A 221 SIKKLPVLVGNCKS-----FVFNRLLHV----YFDQSQKLMYEYGYLPHQIDKIITN 268 (460)
T ss_dssp HTTCEEEEESSCCH-----HHHHHHHHH----HHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HhCCEEEEEecccH-----HHHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 9999 999997 55 367776663 5899999999999999999999873
No 63
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=98.48 E-value=1.7e-06 Score=74.07 Aligned_cols=95 Identities=16% Similarity=0.197 Sum_probs=77.2
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCC----hHHhh----ccceeEEec---CCHHhHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGG----DIGAR----DGKLAIFAA---GDSAVVQWL 73 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~----~~~a~----~g~l~i~~g---G~~~~~~~~ 73 (220)
.+.+.++++++|+|++|+.+...+++.+.+.+ +|+. .|+.|+ +..+. .|.+++++. ++++.++++
T Consensus 113 ~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v 189 (314)
T 3ggo_A 113 KLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLV 189 (314)
T ss_dssp HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHH
T ss_pred HHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHH
Confidence 35567889999999999999888888877754 8998 699884 55544 577888884 678999999
Q ss_pred HHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696 74 TPLFEVLGK-PTFMGGAGCGQSCKIANQIVV 103 (220)
Q Consensus 74 ~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~ 103 (220)
+++|+.+|. ++++++......++++..+-.
T Consensus 190 ~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph 220 (314)
T 3ggo_A 190 KRVWEDVGGVVEYMSPELHDYVFGVVSHLPH 220 (314)
T ss_dssp HHHHHHTTCEEEECCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHcCCEEEEcCHHHHHHHHHHHHHHHH
Confidence 999999999 999998888888888865444
No 64
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.46 E-value=1.6e-06 Score=71.36 Aligned_cols=129 Identities=12% Similarity=0.069 Sum_probs=80.8
Q ss_pred chhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEe--cCCHHhHHHHHHHHHHhcc
Q 044696 6 GIVSALNPGAVYV-DTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA--AGDSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 6 gi~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~--gG~~~~~~~~~~~l~~~~~ 82 (220)
++.+.++++++|| ++++++++.. .+.+. .+.+++-. +...|.....|...++. +++++.+++++++|+.+|.
T Consensus 82 ~l~~~l~~~~~vvs~~~gi~~~~l---~~~~~-~~~~~v~~-~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~ 156 (247)
T 3gt0_A 82 EIKEIIKNDAIIVTIAAGKSIEST---ENAFN-KKVKVVRV-MPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQ 156 (247)
T ss_dssp --CCSSCTTCEEEECSCCSCHHHH---HHHHC-SCCEEEEE-ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEE
T ss_pred HHHhhcCCCCEEEEecCCCCHHHH---HHHhC-CCCcEEEE-eCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCC
Confidence 3555677899888 6677776543 34443 34455432 11233333445555555 3788999999999999999
Q ss_pred ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHhccCCChHHH
Q 044696 83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVF-ADEAGLDVRKWRDAVKGGAAGSMAM 141 (220)
Q Consensus 83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~l-a~~~Gl~~~~~~~~l~~~~~~s~~~ 141 (220)
++++++.-.-..+-++.. .-..+..+.|++.. +.+.|+|+++.++++..+...++.+
T Consensus 157 ~~~~~e~~~d~~~a~~g~--gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~ 214 (247)
T 3gt0_A 157 TEIVSEKLMDVVTSVSGS--SPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKM 214 (247)
T ss_dssp EEECCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCHHHccHHHHHhcc--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence 556665322222222221 11345567777777 8999999999999998876555544
No 65
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=98.35 E-value=2.9e-06 Score=70.87 Aligned_cols=112 Identities=16% Similarity=0.213 Sum_probs=84.6
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCC----ChHHhh----ccceeEEe---cCCHHhHHHHH
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSG----GDIGAR----DGKLAIFA---AGDSAVVQWLT 74 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g----~~~~a~----~g~l~i~~---gG~~~~~~~~~ 74 (220)
+.+.++++.+|+|++++.+...+.+.+.+.+ .|++ .|+.| ||..+. .+..++++ +++++.+++++
T Consensus 82 l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~---~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~ 158 (281)
T 2g5c_A 82 LSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVK 158 (281)
T ss_dssp HHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHH
T ss_pred HHhhCCCCcEEEECCCCcHHHHHHHHHhccc---cceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHH
Confidence 4456789999999999999888888887765 2777 58776 345443 67778888 78899999999
Q ss_pred HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 044696 75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR 125 (220)
Q Consensus 75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~ 125 (220)
++|+.+|. ++++++...+..+|+++|..... ..++.+++.. .|++.+
T Consensus 159 ~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~-a~~~~~~~~~---~~~~~~ 206 (281)
T 2g5c_A 159 RVWEDVGGVVEYMSPELHDYVFGVVSHLPHAV-AFALVDTLIH---MSTPEV 206 (281)
T ss_dssp HHHHHTTCEEEECCHHHHHHHHHHHTHHHHHH-HHHHHHHHHH---HCBTTB
T ss_pred HHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHh---cccchH
Confidence 99999999 88999877799999999876543 2344454433 355543
No 66
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.34 E-value=1.3e-06 Score=74.06 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=78.6
Q ss_pred hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHH----hcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696 7 IVSALNPGAVYV-DTTSSHPALAREIFKVAR----ERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE 78 (220)
Q Consensus 7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~----~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~ 78 (220)
+.+.++++++|+ ++||+++++ +++.+. -.|.+|.+ |+. .+.+..+++| +++++++++++++
T Consensus 122 l~~~~~~~~iv~s~ts~i~~~~---l~~~~~~~~~~~g~h~~~-P~~-------~~~~~~i~~g~~~~~e~~~~~~~l~~ 190 (302)
T 1f0y_A 122 LDKFAAEHTIFASNTSSLQITS---IANATTRQDRFAGLHFFN-PVP-------VMKLVEVIKTPMTSQKTFESLVDFSK 190 (302)
T ss_dssp HTTTSCTTCEEEECCSSSCHHH---HHTTSSCGGGEEEEEECS-STT-------TCCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred HHhhCCCCeEEEECCCCCCHHH---HHHhcCCcccEEEEecCC-Ccc-------cCceEEEeCCCCCCHHHHHHHHHHHH
Confidence 345567788887 567777764 333332 23455554 332 3456667777 7899999999999
Q ss_pred Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696 79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG 134 (220)
Q Consensus 79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~ 134 (220)
.+|+ ++++++ +| +++||++. ..+.|++.++++.|++++++.+++..+
T Consensus 191 ~~G~~~v~~~~~~g-----~i~nr~l~----~~~~Ea~~l~~~g~~~~~~id~~~~~g 239 (302)
T 1f0y_A 191 ALGKHPVSCKDTPG-----FIVNRLLV----PYLMEAIRLYERGDASKEDIDTAMKLG 239 (302)
T ss_dssp HTTCEEEEECSCTT-----TTHHHHHH----HHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred HcCCceEEecCccc-----ccHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 9999 999987 55 67787664 468999999999999999998888754
No 67
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=98.32 E-value=5.8e-06 Score=70.03 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=86.7
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChHHhhccceeEEecC-CHHhHHHHHHHHHHhcc-c
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDIGARDGKLAIFAAG-DSAVVQWLTPLFEVLGK-P 83 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~~a~~g~l~i~~gG-~~~~~~~~~~~l~~~~~-~ 83 (220)
+.+.++++++|+|++++.+...+++.+. .+.+|+.. |+.|+......|..++++.+ +++.+++++++|+.+|. +
T Consensus 85 l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~ 161 (298)
T 2pv7_A 85 LKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKI 161 (298)
T ss_dssp HGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEE
T ss_pred HHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEE
Confidence 4566788999999999998877766554 34688886 99887665656777777755 67888999999999999 8
Q ss_pred eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 044696 84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAV 131 (220)
Q Consensus 84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l 131 (220)
+++++......++++.++-... ...+.|++. +.|++.+...+..
T Consensus 162 ~~~~~~~~d~~~a~~~~~p~~~-a~~l~~~l~---~~g~~~~~~~~la 205 (298)
T 2pv7_A 162 YQTNATEHDHNMTYIQALRHFS-TFANGLHLS---KQPINLANLLALS 205 (298)
T ss_dssp EECCHHHHHHHHHHHTHHHHHH-HHHHHHHHT---TSSCCHHHHHHTC
T ss_pred EECCHHHHHHHHHHHHHHHHHH-HHHHHHHHH---hcCCCHHHHHhhc
Confidence 8998776788888888764432 233444443 3788876655443
No 68
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.30 E-value=1.1e-06 Score=83.31 Aligned_cols=105 Identities=15% Similarity=0.226 Sum_probs=78.1
Q ss_pred hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696 7 IVSALNPGAVYV-DTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE 78 (220)
Q Consensus 7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~ 78 (220)
+.+.++++++++ ++||+++++ +++.+.. .|.||++ |+.. +.+..++.| +++++++++++++
T Consensus 415 l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~ 483 (715)
T 1wdk_A 415 VENHVREDAILASNTSTISISL---LAKALKRPENFVGMHFFN-PVHM-------MPLVEVIRGEKSSDLAVATTVAYAK 483 (715)
T ss_dssp HHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEEECCS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEEEccC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHH
Confidence 455678888887 577887763 4443321 4677766 5543 345656666 7899999999999
Q ss_pred Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696 79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK 132 (220)
Q Consensus 79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~ 132 (220)
.+|+ ++++|+ +|. ++||++. ..+.|++.++++ |+|++++.+++.
T Consensus 484 ~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~~~id~~~~ 529 (715)
T 1wdk_A 484 KMGKNPIVVNDCPGF-----LVNRVLF----PYFGGFAKLVSA-GVDFVRIDKVME 529 (715)
T ss_dssp HTTCEEEEEESCTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HhCCEeEEEcCCCCh-----hhhHHHH----HHHHHHHHHHHC-CCCHHHHHHHHH
Confidence 9999 999997 664 5666554 358999999997 999999999983
No 69
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.27 E-value=9.4e-07 Score=83.80 Aligned_cols=105 Identities=13% Similarity=0.115 Sum_probs=78.8
Q ss_pred hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696 7 IVSALNPGAVYV-DTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE 78 (220)
Q Consensus 7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~ 78 (220)
+.+.++++++++ |+||+++++ +++.+.. .|.||++ |+.. ..+..++.| +++++++++++++
T Consensus 413 l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~ 481 (725)
T 2wtb_A 413 LEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHFFS-PAHI-------MPLLEIVRTNHTSAQVIVDLLDVGK 481 (725)
T ss_dssp HHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEECS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHH
T ss_pred HHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecCCC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHH
Confidence 456678888885 567777764 4433321 4777877 6543 346666666 7899999999999
Q ss_pred Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696 79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK 132 (220)
Q Consensus 79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~ 132 (220)
.+|+ ++++|+ +|. ++|+++. ..+.|++.++++ |+|++++.+++.
T Consensus 482 ~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~e~id~~~~ 527 (725)
T 2wtb_A 482 KIKKTPVVVGNCTGF-----AVNRMFF----PYTQAAMFLVEC-GADPYLIDRAIS 527 (725)
T ss_dssp HTTCEEEEEESSTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred HhCCEEEEECCCccH-----HHHHHHH----HHHHHHHHHHHC-CCCHHHHHHHHH
Confidence 9999 999997 664 5666554 358999999998 999999999994
No 70
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=98.17 E-value=4.2e-06 Score=70.23 Aligned_cols=82 Identities=17% Similarity=0.255 Sum_probs=63.7
Q ss_pred hhhc-CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCC----ChHHhh----ccceeEEe---cCCHHhHHHH
Q 044696 7 IVSA-LNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSG----GDIGAR----DGKLAIFA---AGDSAVVQWL 73 (220)
Q Consensus 7 i~~~-~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g----~~~~a~----~g~l~i~~---gG~~~~~~~~ 73 (220)
+.+. ++++++|||+|++.+...+.+.+.+.+++++|+. .|+.| +|..+. .|..++++ +++++.++++
T Consensus 86 l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v 165 (290)
T 3b1f_A 86 LADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPAL 165 (290)
T ss_dssp HHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHH
T ss_pred HHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHH
Confidence 4455 7789999999999998888888877666889998 58876 555444 56655555 5788899999
Q ss_pred HHHHHHhcc-ceecCC
Q 044696 74 TPLFEVLGK-PTFMGG 88 (220)
Q Consensus 74 ~~~l~~~~~-~~~~G~ 88 (220)
+++|+.+|. ++++++
T Consensus 166 ~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 166 QDLLSGLHARYVEIDA 181 (290)
T ss_dssp HHHTGGGCCEEEECCH
T ss_pred HHHHHHcCCEEEEcCH
Confidence 999999999 888875
No 71
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.16 E-value=4.7e-06 Score=75.06 Aligned_cols=106 Identities=15% Similarity=0.253 Sum_probs=78.4
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEec---CCHHhHHHHHHHHHH
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAA---GDSAVVQWLTPLFEV 79 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~g---G~~~~~~~~~~~l~~ 79 (220)
+.+.++++++|+. ||+++..+ ++++.+.. .|.||. +|+.. ..+..++. ++++++++++++++.
T Consensus 136 l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~ 205 (463)
T 1zcj_A 136 LSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPAHV-------MRLLEVIPSRYSSPTTIATVMSLSKK 205 (463)
T ss_dssp HHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SSTTT-------CCEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred HHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCccc-------ceeEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4456778888886 77777665 67665532 367776 66543 34555555 488999999999999
Q ss_pred hcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696 80 LGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK 132 (220)
Q Consensus 80 ~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~ 132 (220)
+|+ ++++++ +|. ++|+++.. .+.|++.+.++ |++++++-+++.
T Consensus 206 lGk~~v~v~~~~gf-----i~Nrll~~----~~~ea~~l~~~-G~~~~~id~~~~ 250 (463)
T 1zcj_A 206 IGKIGVVVGNCYGF-----VGNRMLAP----YYNQGFFLLEE-GSKPEDVDGVLE 250 (463)
T ss_dssp TTCEEEEBCCSTTT-----THHHHHHH----HHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred hCCEEEEECCCccH-----HHHHHHHH----HHHHHHHHHHc-CCCHHHHHHHHH
Confidence 999 999997 664 45555443 35899999887 899999999987
No 72
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=98.16 E-value=1.5e-05 Score=66.86 Aligned_cols=113 Identities=13% Similarity=0.140 Sum_probs=80.9
Q ss_pred hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc
Q 044696 7 IVSALNPGAVYV-DTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~ 82 (220)
+.+.++++++++ ++||++++ ++++.+. +..+++-.-... ++..+++..++.| +++++++++++++.+++
T Consensus 107 l~~~~~~~~il~s~tS~~~~~---~la~~~~-~~~~~ig~h~~~---p~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~ 179 (283)
T 4e12_A 107 LGELAPAKTIFATNSSTLLPS---DLVGYTG-RGDKFLALHFAN---HVWVNNTAEVMGTTKTDPEVYQQVVEFASAIGM 179 (283)
T ss_dssp HHHHSCTTCEEEECCSSSCHH---HHHHHHS-CGGGEEEEEECS---STTTSCEEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred HHhhCCCCcEEEECCCCCCHH---HHHhhcC-CCcceEEEccCC---CcccCceEEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 456678999999 46666654 4444443 223344332222 1345778888888 58899999999999999
Q ss_pred -ceecCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696 83 -PTFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA 135 (220)
Q Consensus 83 -~~~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~ 135 (220)
+++++. +|. ++||++. ..+.|++.+.++.+++++++-+++..+.
T Consensus 180 ~~v~v~~~~~g~-----i~nr~~~----~~~~ea~~l~~~g~~~~~~id~~~~~~~ 226 (283)
T 4e12_A 180 VPIELKKEKAGY-----VLNSLLV----PLLDAAAELLVDGIADPETIDKTWRIGT 226 (283)
T ss_dssp EEEECSSCCTTT-----THHHHHH----HHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred EEEEEecCCCCE-----EehHHHH----HHHHHHHHHHHhCCCCHHHHHHHHHhcc
Confidence 999954 553 5666654 3689999999999999999999997643
No 73
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.15 E-value=3.4e-08 Score=81.12 Aligned_cols=97 Identities=13% Similarity=0.027 Sum_probs=78.2
Q ss_pred hhcCCCCCEEEecCCCCHHH---HHHHHHHHHhcCCc-EEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696 8 VSALNPGAVYVDTTSSHPAL---AREIFKVARERDCW-AVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK- 82 (220)
Q Consensus 8 ~~~~~~g~~ivd~ST~~p~~---~~~la~~~~~~G~~-~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~- 82 (220)
...+.+|+.+|++||..+.. .+++.+.++++|+. |+|+|++|+...+..+++ ++++..++..+|.++.++.
T Consensus 68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 143 (236)
T 2dc1_A 68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE----LIEEIVLTTRKNWRQFGRKG 143 (236)
T ss_dssp HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG----GEEEEEEEEEEEGGGTTSCE
T ss_pred HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc----cccEEEEEEEcChHHcCcce
Confidence 34567899999999988543 38999999999988 799999999999998886 7887777778888888888
Q ss_pred ceecCCCCHH-HHHHHHHHHHHHHHHH
Q 044696 83 PTFMGGAGCG-QSCKIANQIVVGANLL 108 (220)
Q Consensus 83 ~~~~G~~G~a-~~~Kl~~n~~~~~~~~ 108 (220)
++|.|+.+.+ +.+|..+|++....++
T Consensus 144 ~~~~G~~~~~~~~~~~~~n~~~~~~~a 170 (236)
T 2dc1_A 144 VIFEGSASEAAQKFPKNLNVAATLSIA 170 (236)
T ss_dssp EEEEEEHHHHHHHSTTCCHHHHHHHHH
T ss_pred EEEeccHHHHHHHCCchHHHHHHHHHh
Confidence 8999986444 5888888877644433
No 74
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.15 E-value=8.1e-07 Score=71.60 Aligned_cols=93 Identities=15% Similarity=0.119 Sum_probs=65.5
Q ss_pred hhcCCCCCEEEecCCCCH--H-------H----HHHHHHHHHhcCCcEEEe------cCCCChHHhhccceeEEecCC-H
Q 044696 8 VSALNPGAVYVDTTSSHP--A-------L----AREIFKVARERDCWAVDA------PVSGGDIGARDGKLAIFAAGD-S 67 (220)
Q Consensus 8 ~~~~~~g~~ivd~ST~~p--~-------~----~~~la~~~~~~G~~~lda------pV~g~~~~a~~g~l~i~~gG~-~ 67 (220)
.+.++ ++++|++|+.-+ + . ++.+++.+. +.+|+++ |..+.+.....+...++++|+ +
T Consensus 78 ~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~ 154 (209)
T 2raf_A 78 ATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDD 154 (209)
T ss_dssp HHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEECEEEEEESCH
T ss_pred HHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCceeEEcCCCH
Confidence 34455 899999998332 1 1 455555553 5788883 333322222213556777776 4
Q ss_pred HhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696 68 AVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVV 103 (220)
Q Consensus 68 ~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~ 103 (220)
+.+++++++|+.++. ++++|+.+.+..+|+++|++.
T Consensus 155 ~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~~ 191 (209)
T 2raf_A 155 SAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQM 191 (209)
T ss_dssp HHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHHH
Confidence 788999999999998 999999999999999998874
No 75
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.13 E-value=8.6e-05 Score=67.42 Aligned_cols=144 Identities=11% Similarity=0.061 Sum_probs=104.1
Q ss_pred HhHHHHHHHHHHhcc---ceecCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHH
Q 044696 68 AVVQWLTPLFEVLGK---PTFMGGA-------GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAV 131 (220)
Q Consensus 68 ~~~~~~~~~l~~~~~---~~~~G~~-------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l 131 (220)
.++.++.+.++.... ..+.|+. +.++.+|++.|.+.++.+++++|++.+.++ .++|...+.+++
T Consensus 290 av~ar~~s~~k~~r~~~~~~~~gp~~~~~~~~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iw 369 (497)
T 2p4q_A 290 AVFARCLSALKNERIRASKVLPGPEVPKDAVKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMW 369 (497)
T ss_dssp HHHHHHHHHCHHHHHHHHHHCCCCCCCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred HHHHHHhhcchhhHHHHhhhcCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 356677777665432 3455665 479999999999999999999999999988 799999999999
Q ss_pred hccC-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696 132 KGGA-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD 202 (220)
Q Consensus 132 ~~~~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~ 202 (220)
+.+. ..|++++...+...+. +.+ |.| .+.......|.++..+-+. |+|+|....+..+|+.-..
T Consensus 370 r~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~----gvp~P~~s~aL~~~~~~~~--- 442 (497)
T 2p4q_A 370 RGGCIIRSVFLGQITKAYREEPDLENLLFNKFFADAVTKAQSGWRKSIALATTY----GIPTPAFSTALSFYDGYRS--- 442 (497)
T ss_dssp HSSSTTCBHHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTC---
T ss_pred hcCCchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhccc---
Confidence 9876 6788887655544322 111 112 2333344688899999999 9999999999998886533
Q ss_pred CCCChHHHHHHHHHhcC
Q 044696 203 GKFGTQGLVSVIERING 219 (220)
Q Consensus 203 g~~d~~av~~~~~~~~~ 219 (220)
+.-...++...|+..|
T Consensus 443 -~~~~a~liqa~Rd~FG 458 (497)
T 2p4q_A 443 -ERLPANLLQAQRDYFG 458 (497)
T ss_dssp -SSCTHHHHHHHHHHHS
T ss_pred -CCchhHHHHHHHHhcC
Confidence 2233456666665544
No 76
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.07 E-value=7.3e-05 Score=67.57 Aligned_cols=142 Identities=8% Similarity=0.058 Sum_probs=102.5
Q ss_pred hHHHHHHHHHHhcc---ceecCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhcc
Q 044696 69 VVQWLTPLFEVLGK---PTFMGGA-----GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGG 134 (220)
Q Consensus 69 ~~~~~~~~l~~~~~---~~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~ 134 (220)
++.++.+.++..-. ..+.|+. +.++.+|++.|.+.++.+++++|++.+.++ .++|...+.++++.+
T Consensus 296 v~ar~~s~~k~~R~~~~~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~G 375 (480)
T 2zyd_A 296 VFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG 375 (480)
T ss_dssp HHHHHHHTCHHHHHHHHTTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSS
T ss_pred HHHHhhhcchhhhHHhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcC
Confidence 45666666554322 3456765 889999999999999999999999999988 799999999999987
Q ss_pred C-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCC
Q 044696 135 A-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKF 205 (220)
Q Consensus 135 ~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~ 205 (220)
. -.|++++...+...+. +.+ |.| .+.......|.++..+-+. |+|+|...++..+|+.-... .
T Consensus 376 ciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~----gvp~p~~s~al~~~~~~~~~----~ 447 (480)
T 2zyd_A 376 CIIRAQFLQKITDACAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQN----GIPVPTFSAAVAYYDSYRAA----V 447 (480)
T ss_dssp STTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTCS----S
T ss_pred cchHHHHHHHHHHHHhcCCChHhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhcccC----C
Confidence 6 6788887655544322 111 112 2333344688899999999 99999999999998865433 2
Q ss_pred ChHHHHHHHHHhc
Q 044696 206 GTQGLVSVIERIN 218 (220)
Q Consensus 206 d~~av~~~~~~~~ 218 (220)
-.+.++...|+..
T Consensus 448 ~~~~l~qa~Rd~F 460 (480)
T 2zyd_A 448 LPANLIQAQRDYF 460 (480)
T ss_dssp CTHHHHHHHHHHH
T ss_pred chhhHHHHHHHhc
Confidence 3345555555543
No 77
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.06 E-value=8.4e-05 Score=67.01 Aligned_cols=143 Identities=6% Similarity=0.026 Sum_probs=102.7
Q ss_pred HhHHHHHHHHHHhcc---ceecCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhc
Q 044696 68 AVVQWLTPLFEVLGK---PTFMGGA-----GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKG 133 (220)
Q Consensus 68 ~~~~~~~~~l~~~~~---~~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~ 133 (220)
.++.++.+.++..-. ..+.|+. +.++.+|++.|.+.++.+++++|++.+.++ .++|...+.++++.
T Consensus 287 av~ar~~s~~k~~r~~~~~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~ 366 (474)
T 2iz1_A 287 SVFARYISTYKDERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRA 366 (474)
T ss_dssp HHHHHHHHHCHHHHHHHHHHCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSS
T ss_pred HHHHHHhhhhhhhhHHhhhccCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 345666666654332 3455765 889999999999999999999999999988 79999999999998
Q ss_pred cC-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCC
Q 044696 134 GA-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGK 204 (220)
Q Consensus 134 ~~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~ 204 (220)
+. -.|++++...+...+. +.+ |.| .+.......+.++..+-+. |+|+|....+..+|+.-.. +
T Consensus 367 Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~----~~p~p~~s~al~~~~~~~~----~ 438 (474)
T 2iz1_A 367 GCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQA----GTPIPTFTSAISYYDSYRS----E 438 (474)
T ss_dssp SCTTCBTTHHHHHHHHHHCTTCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTC----S
T ss_pred cchHHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhccc----C
Confidence 76 5788887654444322 111 112 2333345588899999999 9999999999998886533 2
Q ss_pred CChHHHHHHHHHhc
Q 044696 205 FGTQGLVSVIERIN 218 (220)
Q Consensus 205 ~d~~av~~~~~~~~ 218 (220)
.-.+.++...|+..
T Consensus 439 ~~~~~l~qa~rd~f 452 (474)
T 2iz1_A 439 NLPANLIQAQRDYF 452 (474)
T ss_dssp SCTHHHHHHHHHHH
T ss_pred CchhhHHHHHHHhc
Confidence 23345665555543
No 78
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=97.99 E-value=2.9e-05 Score=65.21 Aligned_cols=171 Identities=12% Similarity=0.020 Sum_probs=106.2
Q ss_pred CCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhccceec
Q 044696 11 LNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGKPTFM 86 (220)
Q Consensus 11 ~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~~~~~ 86 (220)
++++++||.. +.++. ..+.+++. .+.+++-+ +...|.....|. +.++.| +++.+++++++|+.+|.++++
T Consensus 88 l~~~~iiiS~~agi~~---~~l~~~l~-~~~~vvr~-mPn~p~~v~~g~-~~l~~~~~~~~~~~~~v~~l~~~iG~~~~v 161 (280)
T 3tri_A 88 SETKILVISLAVGVTT---PLIEKWLG-KASRIVRA-MPNTPSSVRAGA-TGLFANETVDKDQKNLAESIMRAVGLVIWV 161 (280)
T ss_dssp HTTTCEEEECCTTCCH---HHHHHHHT-CCSSEEEE-ECCGGGGGTCEE-EEEECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred cCCCeEEEEecCCCCH---HHHHHHcC-CCCeEEEE-ecCChHHhcCcc-EEEEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 5667688765 44444 34555554 34555543 223454444443 445544 468899999999999995556
Q ss_pred -CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHh--hhhh-hccccCCCCchh
Q 044696 87 -GGA--GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMEL--YGER-MIEKDFRPGGFA 159 (220)
Q Consensus 87 -G~~--G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~--~~~~-~~~~~~~~~f~~ 159 (220)
.+. .....+.-+.+.+++..+.++.|+ +.+.|+++++.++++..+...+. ++.. .-|. +.+.-.+|+.+.
T Consensus 162 ~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l~~~v~spgGtT 238 (280)
T 3tri_A 162 SSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTT 238 (280)
T ss_dssp SSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHCCTTSHH
T ss_pred CCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhccCCChHH
Confidence 432 333333334455666777777776 66999999999999886543333 2221 1122 333334554332
Q ss_pred hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696 160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG 201 (220)
Q Consensus 160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G 201 (220)
...++..++. |++..+.+++...++++.+.|
T Consensus 239 -------~~~l~~le~~----g~~~~~~~av~aa~~r~~el~ 269 (280)
T 3tri_A 239 -------EQAIKVLESG----NLRELFIKALTAAVNRAKELS 269 (280)
T ss_dssp -------HHHHHHHHTT----CHHHHHHHHHHHHHHHHHHHH
T ss_pred -------HHHHHHHHHC----ChHHHHHHHHHHHHHHHHHHH
Confidence 2256677888 999999999999999887754
No 79
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=97.83 E-value=0.00026 Score=63.95 Aligned_cols=129 Identities=9% Similarity=0.033 Sum_probs=94.6
Q ss_pred HhHHHHHHHHHHhcc---ceecCCC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHh
Q 044696 68 AVVQWLTPLFEVLGK---PTFMGGA-GC-----GQSCKIANQIVVGANLLGLSEGLVFADEA------GLDVRKWRDAVK 132 (220)
Q Consensus 68 ~~~~~~~~~l~~~~~---~~~~G~~-G~-----a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------Gl~~~~~~~~l~ 132 (220)
++++++.+.++.... ..+.|+. +. ++.+|.+.|.+.++.+++++|++.+.++. ++|...+.++++
T Consensus 283 av~~~~~s~~k~~r~~~~~~~~g~~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr 362 (482)
T 2pgd_A 283 AVFARCLSSLKDERIQASKKLKGPQNIPFEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWR 362 (482)
T ss_dssp HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred HHHHHhhhhhhhHHHHHhhhcCCCCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 455666666544321 3445654 44 89999999999999999999999999883 999999999999
Q ss_pred ccC-CChHHHHhhhhhhccc-cC-----CCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696 133 GGA-AGSMAMELYGERMIEK-DF-----RPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN 200 (220)
Q Consensus 133 ~~~-~~s~~~~~~~~~~~~~-~~-----~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~ 200 (220)
.+. -.|++++...+...+. +. ++.| .+.......+.++..+.+. |+|+|....+..+|+.-...
T Consensus 363 ~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~----g~p~p~~s~al~~~~~~~~~ 435 (482)
T 2pgd_A 363 GGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQA----GIPMPCFTTALSFYDGYRHA 435 (482)
T ss_dssp SSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHCS
T ss_pred cCcchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhcccC
Confidence 876 5788887654444321 11 1212 2333445688999999999 99999999999988876544
No 80
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.72 E-value=7.5e-06 Score=66.11 Aligned_cols=91 Identities=16% Similarity=0.213 Sum_probs=59.1
Q ss_pred CCCEEEecCCCCHHHHHH----HHHHHHh--cCCcEEEe--cCCCCh--HHhhccc-eeEEecCCHHhHHHHHHHHHHhc
Q 044696 13 PGAVYVDTTSSHPALARE----IFKVARE--RDCWAVDA--PVSGGD--IGARDGK-LAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 13 ~g~~ivd~ST~~p~~~~~----la~~~~~--~G~~~lda--pV~g~~--~~a~~g~-l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
+++++||+++..+....+ ..+.+.+ .+.+++-+ ++++.+ +.+..++ ..++.|++++.+++++++|+.+|
T Consensus 107 ~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G 186 (215)
T 2vns_A 107 AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMG 186 (215)
T ss_dssp TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcC
Confidence 799999999998865421 1111111 12233332 222111 1122233 36788889999999999999999
Q ss_pred c-ceecCCCCHHHHHHHHHHHHH
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVV 103 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~ 103 (220)
. ++++|+.|+|+.++...++++
T Consensus 187 ~~~~~~g~~~~~~~~e~~~~~~~ 209 (215)
T 2vns_A 187 FMPVDMGSLASAWEVEAMPLRLL 209 (215)
T ss_dssp CEEEECCSGGGHHHHHHSCCBC-
T ss_pred CceEeecchhhhhHhhhhhhhhe
Confidence 9 999999999999987655443
No 81
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=97.67 E-value=6.5e-05 Score=65.06 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=70.7
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCCh-HHhh-------ccceeEEecC---CHH--------hHH
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGD-IGAR-------DGKLAIFAAG---DSA--------VVQ 71 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~-~~a~-------~g~l~i~~gG---~~~--------~~~ 71 (220)
++|++|+|++|+.+...+++.+... +++||. .|+.|+. .+.. .|...+++.+ +++ .++
T Consensus 92 ~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~ 169 (341)
T 3ktd_A 92 APNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWK 169 (341)
T ss_dssp CTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHH
T ss_pred CCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHH
Confidence 7899999999999988888876553 579999 6999874 3332 3446888876 445 889
Q ss_pred HHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696 72 WLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVV 103 (220)
Q Consensus 72 ~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~ 103 (220)
+++++|+.+|. ++++++...-..+.++.++-.
T Consensus 170 ~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh 202 (341)
T 3ktd_A 170 DVVQMALAVGAEVVPSRVGPHDAAAARVSHLTH 202 (341)
T ss_dssp HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHH
Confidence 99999999998 999998777777877766544
No 82
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.60 E-value=9.8e-08 Score=81.74 Aligned_cols=75 Identities=24% Similarity=0.166 Sum_probs=62.4
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE----ecC-CCCh---HHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD----APV-SGGD---IGARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld----apV-~g~~---~~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
+.+++|++|+|+||..|+. +++.+.+.++|..|+| +|+ +|.. ..+..|+|..|++|+.+.+++..++|+.+
T Consensus 214 ~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~~~~~~~~vf~~~ 292 (312)
T 2i99_A 214 EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSL 292 (312)
T ss_dssp GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSCCCTTSCEEEECC
T ss_pred HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCCCCCCCCcEEEECC
Confidence 4678999999999999975 8999999999999999 788 5655 45667899999999988777777777777
Q ss_pred cc-ce
Q 044696 81 GK-PT 84 (220)
Q Consensus 81 ~~-~~ 84 (220)
|. +.
T Consensus 293 G~~i~ 297 (312)
T 2i99_A 293 GMAVE 297 (312)
T ss_dssp CCHHH
T ss_pred ChHHH
Confidence 76 54
No 83
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.37 E-value=0.0011 Score=54.30 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=55.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P 83 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~ 83 (220)
++.+.+++|++|||+|...+.. +.+.+.++|++|+- -|+.|.+ .++.++++++++.++++++.+|. +
T Consensus 60 ~l~~~l~~g~ivvd~sgs~~~~---vl~~~~~~g~~fvg~HPm~g~~--------~~i~a~d~~a~~~l~~L~~~lG~~v 128 (232)
T 3dfu_A 60 KLSAFARRGQMFLHTSLTHGIT---VMDPLETSGGIVMSAHPIGQDR--------WVASALDELGETIVGLLVGELGGSI 128 (232)
T ss_dssp HHHTTCCTTCEEEECCSSCCGG---GGHHHHHTTCEEEEEEEEETTE--------EEEEESSHHHHHHHHHHHHHTTCEE
T ss_pred HHHHhcCCCCEEEEECCcCHHH---HHHHHHhCCCcEEEeeeCCCCc--------eeeeCCCHHHHHHHHHHHHHhCCEE
Confidence 4556778999999997665432 23334567999984 7997653 55667788899999999999999 9
Q ss_pred eecCCC
Q 044696 84 TFMGGA 89 (220)
Q Consensus 84 ~~~G~~ 89 (220)
+++++.
T Consensus 129 v~~~~~ 134 (232)
T 3dfu_A 129 VEIADD 134 (232)
T ss_dssp CCCCGG
T ss_pred EEeCHH
Confidence 999864
No 84
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.92 E-value=0.017 Score=52.13 Aligned_cols=120 Identities=8% Similarity=0.044 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cC-----CCCc
Q 044696 91 CGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DF-----RPGG 157 (220)
Q Consensus 91 ~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~~~f 157 (220)
....+|.+.|.+.++.+.+++|++.+.++ .++|...+..+++.+. -.|++++...+...+. +. +|.|
T Consensus 317 ~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~f 396 (484)
T 4gwg_A 317 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFF 396 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHHH
Confidence 46789999999999999999999987765 5699999999999877 5788887654433221 11 1223
Q ss_pred --hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhc
Q 044696 158 --FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218 (220)
Q Consensus 158 --~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~ 218 (220)
.+.......|.++..+-+. |+|.|.+.++.++|+.-. .+.-.+.++...|+..
T Consensus 397 ~~~~~~~~~~~r~vv~~a~~~----gip~P~~s~al~y~~~~r----~~~lpanliqaqRd~F 451 (484)
T 4gwg_A 397 KSAVENCQDSWRRAVSTGVQA----GIPMPCFTTALSFYDGYR----HEMLPASLIQAQRDYF 451 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHT----CSCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHhc----cCCCHHHHHHHHHHhh
Confidence 2444455677799999999 999999999999999883 3444555776666554
No 85
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=96.77 E-value=0.0005 Score=55.37 Aligned_cols=82 Identities=13% Similarity=0.159 Sum_probs=55.8
Q ss_pred CCCCEEEecCCCCH------------HHHHHHHHHHHhcCCcE------EEecCCC-ChHHhhccceeEEecCCHHhHHH
Q 044696 12 NPGAVYVDTTSSHP------------ALAREIFKVARERDCWA------VDAPVSG-GDIGARDGKLAIFAAGDSAVVQW 72 (220)
Q Consensus 12 ~~g~~ivd~ST~~p------------~~~~~la~~~~~~G~~~------ldapV~g-~~~~a~~g~l~i~~gG~~~~~~~ 72 (220)
.++++||++++.-+ ...+.+++.+. +.++ +.+++.. +|.....+...++.|.++++.++
T Consensus 104 ~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~ 181 (220)
T 4huj_A 104 WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQ 181 (220)
T ss_dssp CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHH
T ss_pred cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHH
Confidence 36889999997652 25667777664 3333 3445544 44332223344555667789999
Q ss_pred HHHHHHHhcc-ceecCCCCHHHHH
Q 044696 73 LTPLFEVLGK-PTFMGGAGCGQSC 95 (220)
Q Consensus 73 ~~~~l~~~~~-~~~~G~~G~a~~~ 95 (220)
++++|+.+|. ++++|+.++|..+
T Consensus 182 v~~l~~~~G~~~~~~G~l~~a~~~ 205 (220)
T 4huj_A 182 VAELISSLGFAPVDLGTLAASGPI 205 (220)
T ss_dssp HHHHHHHTTCEEEECCSHHHHHHH
T ss_pred HHHHHHHhCCCeEeeCChhhcchh
Confidence 9999999999 9999998887554
No 86
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=96.17 E-value=0.1 Score=43.85 Aligned_cols=180 Identities=9% Similarity=-0.020 Sum_probs=100.0
Q ss_pred hhhcCCCCCEEEecCCC-CHHHHHHHHHHHHhc----CCcEEEecCCCChHHhhccceeEEecC----CHHhHHHHHHHH
Q 044696 7 IVSALNPGAVYVDTTSS-HPALAREIFKVARER----DCWAVDAPVSGGDIGARDGKLAIFAAG----DSAVVQWLTPLF 77 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~-~p~~~~~la~~~~~~----G~~~ldapV~g~~~~a~~g~l~i~~gG----~~~~~~~~~~~l 77 (220)
+.+.+.++++||-+... .+. ..+.+.+... |+.+..+-..+.-.....+.-.+.+|. +.+..+++..+|
T Consensus 89 l~~~l~~~~~iv~l~nGi~~~--~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l 166 (312)
T 3hn2_A 89 IRPLVEEGTQILTLQNGLGNE--EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMF 166 (312)
T ss_dssp HGGGCCTTCEEEECCSSSSHH--HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHH
T ss_pred HHhhcCCCCEEEEecCCCCcH--HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHH
Confidence 34566778888776544 343 3445544322 222223333332111122222344543 345667788888
Q ss_pred HHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcC--CCH-----HHHH
Q 044696 78 EVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAG--LDV-----RKWR 128 (220)
Q Consensus 78 ~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~G--l~~-----~~~~ 128 (220)
..-+- +.+..+.-...--|++.|..+. ....++.|+..++++.| ++. +.++
T Consensus 167 ~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~ 246 (312)
T 3hn2_A 167 RQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIADGYVDDML 246 (312)
T ss_dssp HHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHH
T ss_pred HhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHH
Confidence 87665 5444457778888888886532 23456789999999999 552 2333
Q ss_pred HHHhccCC-ChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696 129 DAVKGGAA-GSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD 202 (220)
Q Consensus 129 ~~l~~~~~-~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~ 202 (220)
++....+. .+.+++ .+.++.. .-++.. ...+++.+++. |+++|..+.+.++.+.....|+
T Consensus 247 ~~~~~~~~~~sSM~q----D~~~gr~---tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~ll~~~~~~~~ 307 (312)
T 3hn2_A 247 EFTDAMGEYKPSMEI----DREEGRP---LEIAAI---FRTPLAYGARE----GIAMPRVEMLATLLEQATGEGH 307 (312)
T ss_dssp HHHTTSCSCCCHHHH----HHHTTCC---CCHHHH---THHHHHHHHHT----TCCCHHHHHHHHHHHHHTTC--
T ss_pred HHHhcCCCCCchHHH----HHHhCCC---ccHHHH---hhHHHHHHHHh----CCCCCHHHHHHHHHHHHHhccc
Confidence 33333221 122211 1222221 112222 46788999999 9999999999999887766665
No 87
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=96.11 E-value=0.14 Score=43.24 Aligned_cols=174 Identities=12% Similarity=0.066 Sum_probs=99.5
Q ss_pred hhhcCCCCCEEEecCC-CCHHHHHHHHHHHH-hc--CCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696 7 IVSALNPGAVYVDTTS-SHPALAREIFKVAR-ER--DCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST-~~p~~~~~la~~~~-~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~ 82 (220)
+.+.+.++++||.++. +.++ ..+.+.+. +. |+.+..+-.+|.......+.-.+.+|. .+..+++..+|..-+-
T Consensus 106 l~~~l~~~~~iv~~~nGi~~~--~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~ig~-~~~~~~l~~~l~~~~~ 182 (318)
T 3hwr_A 106 MKPALAKSALVLSLQNGVENA--DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELVIEP-TSHGANLAAIFAAAGV 182 (318)
T ss_dssp HTTTSCTTCEEEEECSSSSHH--HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEECC-CTTTHHHHHHHHHTTC
T ss_pred HHHhcCCCCEEEEeCCCCCcH--HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEEEcC-CHHHHHHHHHHHhCCC
Confidence 4456778888887654 4443 35555542 10 112222333332221122222334555 4455778888887666
Q ss_pred -ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCH-----HHHHHHHhccC
Q 044696 83 -PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDV-----RKWRDAVKGGA 135 (220)
Q Consensus 83 -~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~-----~~~~~~l~~~~ 135 (220)
+++..++-...-.|++.|.... .....+.|+..++++.|++. +.+++++...+
T Consensus 183 ~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~ 262 (318)
T 3hwr_A 183 PVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMP 262 (318)
T ss_dssp CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHST
T ss_pred CcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcC
Confidence 5555567778999999886432 23467789999999999874 23334443322
Q ss_pred -CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 136 -AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 136 -~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
..|.+++. +.++..+ -++.. ...+++.+++. |+++|..+...++.+..
T Consensus 263 ~~~sSM~qD----~~~gr~t---Eid~i---~G~vv~~a~~~----gv~tP~~~~l~~ll~~~ 311 (318)
T 3hwr_A 263 RQSSSTAQD----LARGKRS---EIDHL---NGLIVRRGDAL----GIPVPANRVLHALVRLI 311 (318)
T ss_dssp TCCCHHHHH----HHTTCCC---SGGGT---HHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHH----HHcCChh---HHHHH---HHHHHHHHHHh----CCCCcHHHHHHHHHHHH
Confidence 11222221 1222211 22333 46788999999 99999999988777654
No 88
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.06 E-value=0.15 Score=43.00 Aligned_cols=172 Identities=14% Similarity=0.024 Sum_probs=99.0
Q ss_pred hhhcCCCCCEEEecCCC-CHHHHHHHHHHHHhcCCcEEEecCCCChHHhh------ccceeEEec----CCHHhHHHHHH
Q 044696 7 IVSALNPGAVYVDTTSS-HPALAREIFKVARERDCWAVDAPVSGGDIGAR------DGKLAIFAA----GDSAVVQWLTP 75 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~-~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~------~g~l~i~~g----G~~~~~~~~~~ 75 (220)
+.+.+.++++||.+... .+. +.+.+.+.. -+++.+|+.-+....+ .+.-.+.+| .+.+..+++..
T Consensus 91 l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~--~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~ 166 (320)
T 3i83_A 91 LRDAVAPDTGIVLISNGIDIE--PEVAAAFPD--NEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAA 166 (320)
T ss_dssp HTTSCCTTCEEEEECSSSSCS--HHHHHHSTT--SCEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHH
T ss_pred HHhhcCCCCEEEEeCCCCChH--HHHHHHCCC--CcEEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHH
Confidence 34456678888876543 222 344444432 2567777653211111 112234454 34566778888
Q ss_pred HHHHhcc-ceecCCCCHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHcCCCH-----HHHHH
Q 044696 76 LFEVLGK-PTFMGGAGCGQSCKIANQIVV--------------------GANLLGLSEGLVFADEAGLDV-----RKWRD 129 (220)
Q Consensus 76 ~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~--------------------~~~~~~~aEa~~la~~~Gl~~-----~~~~~ 129 (220)
+|..-+- +.+..+.-...-.|++.|..+ .....++.|+..++++.|++. +.+++
T Consensus 167 ~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~ 246 (320)
T 3i83_A 167 AFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVA 246 (320)
T ss_dssp HHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred HHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHH
Confidence 8887666 655566788899999887532 123467889999999999874 23333
Q ss_pred HHhccCC-ChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696 130 AVKGGAA-GSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA 196 (220)
Q Consensus 130 ~l~~~~~-~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~ 196 (220)
+....+. .+.+++ .+.++.. .-++.. ...+++.+++. |+++|..+.+.++.+.
T Consensus 247 ~~~~~~~~~sSM~q----D~~~gr~---tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~~l~~ 300 (320)
T 3i83_A 247 STYKMPPYKTSMLV----DFEAGQP---METEVI---LGNAVRAGRRT----RVAIPHLESVYALMKL 300 (320)
T ss_dssp HHHHSCCCCCHHHH----HHHHTCC---CCHHHH---THHHHHHHHHT----TCCCHHHHHHHHHHHH
T ss_pred HHhcCCCCCCcHHH----HHHhCCC---chHHHH---ccHHHHHHHHh----CCCCCHHHHHHHHHHH
Confidence 3332221 111111 1111211 112222 36788999999 9999999998776654
No 89
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.49 E-value=0.091 Score=44.60 Aligned_cols=119 Identities=13% Similarity=0.041 Sum_probs=73.4
Q ss_pred CHHhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcCCC
Q 044696 66 DSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIV---------------------VGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 66 ~~~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~---------------------~~~~~~~~aEa~~la~~~Gl~ 123 (220)
+.+..+++..+|..-+- +.+.-+.-...-.|++.|.. ......++.|+..++++.|++
T Consensus 175 ~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~ 254 (335)
T 3ghy_A 175 ASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCP 254 (335)
T ss_dssp CCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCC
Confidence 34566778888887665 55545566667778765542 234567899999999999987
Q ss_pred HH----HHHHHHhccCCChHHHHhhhhhhccccCCCCc---hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696 124 VR----KWRDAVKGGAAGSMAMELYGERMIEKDFRPGG---FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA 196 (220)
Q Consensus 124 ~~----~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f---~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~ 196 (220)
+. .++++....+.. .+.|. .|+..+- -++.. ...+++.+++. |+++|..+.+.++.+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~-------~sSM~-qD~~~gr~~tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~li~~ 319 (335)
T 3ghy_A 255 IEQSGEARSAVTRQLGAF-------KTSML-QDAEAGRGPLEIDAL---VASVREIGLHV----GVPTPQIDTLLGLVRL 319 (335)
T ss_dssp CCSCHHHHHHHHHTTCSC-------CCTTT-C-----CCCCCHHHH---THHHHHHHHHH----TCCCHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHhccCCC-------CcHHH-HHHHcCCCCchHHHH---hhHHHHHHHHh----CCCCCHHHHHHHHHHH
Confidence 53 333333322111 12222 1222221 13333 56788999999 9999999999888775
Q ss_pred HHH
Q 044696 197 MVA 199 (220)
Q Consensus 197 a~~ 199 (220)
..+
T Consensus 320 ~e~ 322 (335)
T 3ghy_A 320 HAQ 322 (335)
T ss_dssp HHH
T ss_pred HHh
Confidence 433
No 90
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=92.27 E-value=0.3 Score=41.64 Aligned_cols=117 Identities=15% Similarity=0.030 Sum_probs=64.8
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCChHH------hhccceeEEe---cCCHHhHHHHHH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGDIG------ARDGKLAIFA---AGDSAVVQWLTP 75 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~~~------a~~g~l~i~~---gG~~~~~~~~~~ 75 (220)
.+.+.+++|++|+|++++.. .+.+.....++.|+- .| +|.... ...|...+++ +.+.++++.++.
T Consensus 92 ~i~~~l~~~~ivi~~~gv~~----~~~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~ 166 (338)
T 1np3_A 92 EIEPNLKKGATLAFAHGFSI----HYNQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALS 166 (338)
T ss_dssp HTGGGCCTTCEEEESCCHHH----HTTSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHH
T ss_pred HHHhhCCCCCEEEEcCCchh----HHHhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHH
Confidence 35567889999999865433 122211234566654 46 443221 2235555544 345678899999
Q ss_pred HHHHhcc-c---eecCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 044696 76 LFEVLGK-P---TFMGGAGCGQSCKIANQ-IVVGANLLGLSEGLVFADEAGLDVRKW 127 (220)
Q Consensus 76 ~l~~~~~-~---~~~G~~G~a~~~Kl~~n-~~~~~~~~~~aEa~~la~~~Gl~~~~~ 127 (220)
+++.+|. . +.+.....-.......+ .+..+....++.++....+.|++++..
T Consensus 167 l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 167 YACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp HHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 9999997 3 34432222333334444 233333444444454555899998754
No 91
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.04 E-value=2.9 Score=34.41 Aligned_cols=121 Identities=13% Similarity=0.042 Sum_probs=73.0
Q ss_pred CCHHhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHcCCC
Q 044696 65 GDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG--------------------ANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 65 G~~~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~--------------------~~~~~~aEa~~la~~~Gl~ 123 (220)
|+.+..+++..+|..-+- +.+.-+.-...--|++.|..+. ....++.|+..++++.|++
T Consensus 137 ~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~ 216 (294)
T 3g17_A 137 QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLN 216 (294)
T ss_dssp ECSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 455556667777766444 4444567778889998887322 1235678999999999976
Q ss_pred H--HHHHHHHh---cc-C-CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696 124 V--RKWRDAVK---GG-A-AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA 196 (220)
Q Consensus 124 ~--~~~~~~l~---~~-~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~ 196 (220)
. +.+.+.+. .. + ..|.+++. +.++..+ -++.. ...+++.+++. |+++|..+...++.+.
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~t---Eid~i---~G~vv~~a~~~----gv~~P~~~~l~~ll~~ 282 (294)
T 3g17_A 217 FSEQTVDTIMTIYQGYPDEMGTSMYYD----IVHQQPL---EVEAI---QGFIYRRAREH----NLDTPYLDTIYSFLRA 282 (294)
T ss_dssp CCHHHHHHHHHHHHTSCTTCCCHHHHH----HHTTCCC---SGGGT---HHHHHHHHHHT----TCCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCCCCcHHHH----HHcCCCc---cHHHh---hhHHHHHHHHh----CCCCChHHHHHHHHHH
Confidence 3 22333322 11 1 11222211 1222211 12222 46788999999 9999999999888775
Q ss_pred HHH
Q 044696 197 MVA 199 (220)
Q Consensus 197 a~~ 199 (220)
..+
T Consensus 283 ~e~ 285 (294)
T 3g17_A 283 YQQ 285 (294)
T ss_dssp HHH
T ss_pred HHh
Confidence 544
No 92
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=88.58 E-value=3.8 Score=36.46 Aligned_cols=105 Identities=13% Similarity=0.068 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cCC---CCc--h
Q 044696 92 GQSCKIANQIVVGANLLGLSEGLVFADEA------GLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DFR---PGG--F 158 (220)
Q Consensus 92 a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~~---~~f--~ 158 (220)
...++-+.+.+.++-+.++++++.+.+++ +||...+..+++.+. -.|.++....+...++ +.. +.| .
T Consensus 323 ~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~~l~~~~~~~ 402 (478)
T 1pgj_A 323 GPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLMCAFQTE 402 (478)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTTGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChhhHHHHHHHH
Confidence 56788889999999999999999998874 999999999998766 4566665543333221 110 223 3
Q ss_pred hhHHHHHHHHHHHH-HhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696 159 AEYMVKDMGMGVDV-VEESEDERVVVLPGAALGKQLFSAMVAN 200 (220)
Q Consensus 159 ~~~~~KD~~~~~~~-a~~~~~~~g~~~p~~~~~~~~~~~a~~~ 200 (220)
+.......|.++.. +-.. |+|.|....+..+|+.....
T Consensus 403 ~~~~~~~~r~~v~~~~~~~----g~~~p~~~~~l~y~d~~~~~ 441 (478)
T 1pgj_A 403 IRAGLQNYRDMVALITSKL----EVSIPVLSASLNYVTAMFTP 441 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHc----CCChHHHHHHHHHHHHhccc
Confidence 44556778888888 9999 99999999999999977554
No 93
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.25 E-value=0.12 Score=43.16 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=45.4
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec-CCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP-VSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap-V~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.++.+++|.++||++....... + +.+.++|+.++++| +.|...++..+++. ++.+.|+|..+.
T Consensus 232 ~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg~~g~v~~a~a~~l~---------~~~~~~~l~~~~ 295 (300)
T 2rir_A 232 VLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPGLPGIVAPKTAGQIL---------ANVLSKLLAEIQ 295 (300)
T ss_dssp HHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCHHHHHCHHHHHHHH---------HHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCCCCCcHHHHHHHHHH---------HHHHHHHHHHhc
Confidence 5677899999999998644331 3 45667899999999 88877677666653 456677766553
No 94
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=84.12 E-value=0.71 Score=38.64 Aligned_cols=47 Identities=9% Similarity=0.015 Sum_probs=40.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChH
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDI 52 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~ 52 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++......|+..-+
T Consensus 194 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP 240 (290)
T 3gvx_A 194 RLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP 240 (290)
T ss_dssp HHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred HHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence 56788999999999999999999999999999888876666766543
No 95
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=77.01 E-value=1 Score=37.57 Aligned_cols=35 Identities=23% Similarity=0.384 Sum_probs=28.4
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
+.+.++.+++|+++. |..++ +.++++++|+.++|+
T Consensus 228 ~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~G~~~v~G 262 (297)
T 2egg_A 228 ERLRPGVIVSDIIYN-PLETK-WLKEAKARGARVQNG 262 (297)
T ss_dssp TTCCTTCEEEECCCS-SSSCH-HHHHHHHTTCEEECS
T ss_pred HHcCCCCEEEEcCCC-CCCCH-HHHHHHHCcCEEECC
Confidence 346789999999994 76664 888899999998876
No 96
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=72.46 E-value=2 Score=31.55 Aligned_cols=30 Identities=7% Similarity=-0.023 Sum_probs=23.7
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVD 44 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld 44 (220)
...+.+|+++||. ++++.+.++++|++||+
T Consensus 92 ~g~~~i~~~~~~~----~~~l~~~a~~~Gi~~ig 121 (138)
T 1y81_A 92 AGFKKLWFQPGAE----SEEIRRFLEKAGVEYSF 121 (138)
T ss_dssp TTCCEEEECTTSC----CHHHHHHHHHHTCEEEC
T ss_pred cCCCEEEEcCccH----HHHHHHHHHHCCCEEEc
Confidence 3456788888885 57888888889999987
No 97
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=71.96 E-value=1.9 Score=34.99 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=28.0
Q ss_pred hhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 8 VSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 8 ~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
.+.+++|++++|+++. |..+ ++.+.++++|++++++
T Consensus 193 ~~~l~~g~~viD~~~~-p~~t-~l~~~a~~~g~~~v~g 228 (263)
T 2d5c_A 193 AELFPEEGAAVDLVYR-PLWT-RFLREAKAKGLKVQTG 228 (263)
T ss_dssp GGGSCSSSEEEESCCS-SSSC-HHHHHHHHTTCEEECS
T ss_pred HHHcCCCCEEEEeecC-Cccc-HHHHHHHHCcCEEECc
Confidence 3567889999999987 5444 4778888899988865
No 98
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=68.99 E-value=1.2 Score=36.95 Aligned_cols=37 Identities=16% Similarity=0.121 Sum_probs=25.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
++.+.++++.+++|+++. | .++ +.++++++|+..+|+
T Consensus 194 ~l~~~l~~~~~v~D~vY~-P-~T~-ll~~A~~~G~~~~~G 230 (269)
T 3phh_A 194 VLKGYFKEGKLAYDLAYG-F-LTP-FLSLAKELKTPFQDG 230 (269)
T ss_dssp HHHHHHHHCSEEEESCCS-S-CCH-HHHHHHHTTCCEECS
T ss_pred HHHhhCCCCCEEEEeCCC-C-chH-HHHHHHHCcCEEECC
Confidence 444456678888888886 5 443 777788888766554
No 99
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=68.42 E-value=2.7 Score=35.61 Aligned_cols=40 Identities=13% Similarity=0.222 Sum_probs=34.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++..+. .+|.
T Consensus 215 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV 256 (324)
T 3hg7_A 215 SRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDV 256 (324)
T ss_dssp TTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESC
T ss_pred HHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEecc
Confidence 567889999999999999999999999999987764 4664
No 100
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=67.13 E-value=28 Score=25.45 Aligned_cols=60 Identities=12% Similarity=0.050 Sum_probs=37.9
Q ss_pred CEEEecCCCCHH----HHHHHHHHHHhcCCc-EEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc--ceecC
Q 044696 15 AVYVDTTSSHPA----LAREIFKVARERDCW-AVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--PTFMG 87 (220)
Q Consensus 15 ~~ivd~ST~~p~----~~~~la~~~~~~G~~-~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--~~~~G 87 (220)
++|||+.+-.-. ....+.+.++..|+. |+..||..... +.+.+++....++.... .+||-
T Consensus 44 ~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~~iPv~~~~~-------------~~~~~~~~~~~l~~~~~pVlvHC~ 110 (156)
T 2f46_A 44 KTIICNRPDREEESQPDFAQIKQWLEQAGVTGFHHQPVTARDI-------------QKHDVETFRQLIGQAEYPVLAYCR 110 (156)
T ss_dssp CEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEEECCCCTTTC-------------CHHHHHHHHHHHHTSCSSEEEECS
T ss_pred CEEEECCCCccccCCCcHHHHHHHHHHCCCHhheECccCCCCC-------------CHHHHHHHHHHHHhCCCCEEEECC
Confidence 789999754210 123455667788999 99999975421 23455566666665544 78874
No 101
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=66.73 E-value=0.79 Score=39.33 Aligned_cols=37 Identities=16% Similarity=0.158 Sum_probs=32.7
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP 46 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap 46 (220)
+.+++|+.|++++|..|. .+++...+.+++..|+|..
T Consensus 214 ~~l~~G~~V~~vgs~~p~-~~El~~~~~~~a~v~vD~~ 250 (350)
T 1x7d_A 214 DMLEPGMHLNAVGGDCPG-KTELHADVLRNARVFVEYE 250 (350)
T ss_dssp GGCCTTCEEEECSCCBTT-BEEECHHHHHTSEEEESSH
T ss_pred HHcCCCCEEEECCCCCCC-ceeeCHHHHhcCcEEECCH
Confidence 467899999999999999 8899988888888999973
No 102
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=66.31 E-value=25 Score=30.11 Aligned_cols=72 Identities=18% Similarity=0.043 Sum_probs=50.8
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHh--cCCcEEEecCCCC-hHH----hhcc-ceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696 15 AVYVDTT-SSHPALAREIFKVARE--RDCWAVDAPVSGG-DIG----ARDG-KLAIFAAGDSAVVQWLTPLFEVLGK-PT 84 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~--~G~~~ldapV~g~-~~~----a~~g-~l~i~~gG~~~~~~~~~~~l~~~~~-~~ 84 (220)
.+.||.. ..+++++.++.+.+.+ .++.|++-|+.-. ... .+.- .+.|..++.- ..+.++.+++.=+. ++
T Consensus 192 ~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v 270 (389)
T 2oz8_A 192 KVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADIL 270 (389)
T ss_dssp EEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCBCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEE
Confidence 5778875 3479999999999999 8999999998632 111 1222 5677777776 67778888876444 55
Q ss_pred ecC
Q 044696 85 FMG 87 (220)
Q Consensus 85 ~~G 87 (220)
-+.
T Consensus 271 ~ik 273 (389)
T 2oz8_A 271 NVH 273 (389)
T ss_dssp EEC
T ss_pred EEC
Confidence 554
No 103
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=65.27 E-value=5.2 Score=33.83 Aligned_cols=40 Identities=15% Similarity=0.245 Sum_probs=34.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+++..+-...++.+.+.+.++. .+|.
T Consensus 221 ~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV 262 (330)
T 4e5n_A 221 ELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADV 262 (330)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecc
Confidence 567889999999999999999999999999988766 5665
No 104
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=63.02 E-value=4.3 Score=34.35 Aligned_cols=45 Identities=2% Similarity=0.015 Sum_probs=37.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCC
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGG 50 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~ 50 (220)
..++.+++|.++||+|+..+-..+++.+.+++..+....-.|+..
T Consensus 212 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~ 256 (324)
T 3evt_A 212 ELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEP 256 (324)
T ss_dssp HHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSS
T ss_pred HHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCC
Confidence 467789999999999999999999999999987776544445543
No 105
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=62.34 E-value=3.3 Score=34.28 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=26.5
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
+.++++.+++|+++. |..+ .+.++++++|+..+|+
T Consensus 198 ~~l~~~~~V~D~vY~-P~~T-~ll~~A~~~G~~~~~G 232 (277)
T 3don_A 198 NRLASHTLVSDIVYN-PYKT-PILIEAEQRGNPIYNG 232 (277)
T ss_dssp TTCCSSCEEEESCCS-SSSC-HHHHHHHHTTCCEECT
T ss_pred HHcCCCCEEEEecCC-CCCC-HHHHHHHHCcCEEeCC
Confidence 346789999999998 5444 5788889999876553
No 106
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=60.60 E-value=4.1 Score=34.04 Aligned_cols=37 Identities=14% Similarity=0.263 Sum_probs=32.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWA 42 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 42 (220)
..++.+++|.++||+|+..+-...++.+.+++..+..
T Consensus 195 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~g 231 (303)
T 1qp8_A 195 QHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFI 231 (303)
T ss_dssp HHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCE
T ss_pred HHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceE
Confidence 5778899999999999999999999999998866543
No 107
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=60.57 E-value=12 Score=31.37 Aligned_cols=36 Identities=6% Similarity=0.195 Sum_probs=30.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
.+++.+++|.++||+|+..+....++.+.+.+.++.
T Consensus 231 ~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ 266 (330)
T 2gcg_A 231 DFFQKMKETAVFINISRGDVVNQDDLYQALASGKIA 266 (330)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSS
T ss_pred HHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCcc
Confidence 356788999999999999998889999999876554
No 108
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=60.38 E-value=3 Score=35.42 Aligned_cols=45 Identities=9% Similarity=0.146 Sum_probs=35.8
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCC
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGG 50 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~ 50 (220)
..++.+++|.++||+|+..+-..+++.+.+.+..+...---|...
T Consensus 215 ~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~ 259 (334)
T 2pi1_A 215 ERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFED 259 (334)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTT
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCC
Confidence 467889999999999999999999999999887765333334444
No 109
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=60.03 E-value=42 Score=28.38 Aligned_cols=68 Identities=12% Similarity=0.005 Sum_probs=47.5
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
-.+.||.. ..+++++.++.+.+++.|+.|++-|+.-.. . -.+.-.+.|..++.-...+.++.+++.=+
T Consensus 192 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 265 (371)
T 2ovl_A 192 FPLMVDANMKWTVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGS 265 (371)
T ss_dssp SCEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTC
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 35778875 347899999999999999999999985321 1 11222456777666555677778877543
No 110
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=59.86 E-value=4.7 Score=34.41 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=32.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWA 42 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 42 (220)
..++.+++|.++||+|+..+...+++.+.+++.++..
T Consensus 244 ~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~g 280 (347)
T 1mx3_A 244 FTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRG 280 (347)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEE
T ss_pred HHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcE
Confidence 4677899999999999999999999999999877653
No 111
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=59.55 E-value=52 Score=28.49 Aligned_cols=65 Identities=11% Similarity=0.024 Sum_probs=45.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 232 ~L~vDaN~~~~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~ 302 (412)
T 3stp_A 232 DLMLECYMGWNLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINR 302 (412)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHc
Confidence 5778874 468999999999999999999999996321 1122234566666655555566666654
No 112
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=59.38 E-value=4 Score=35.64 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=33.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVD 44 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~ld 44 (220)
+.++.+++|.++||+|+..+-..+++.+.+++..+. .+|
T Consensus 218 ~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lD 258 (404)
T 1sc6_A 218 KEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAID 258 (404)
T ss_dssp HHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEE
T ss_pred HHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEe
Confidence 467889999999999999999999999999876543 577
No 113
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=58.24 E-value=4.2 Score=29.98 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=19.7
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAV 43 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l 43 (220)
..+.+|+++||. .+++.+.++++|++|+
T Consensus 94 g~~~i~i~~~~~----~~~l~~~a~~~Gi~~i 121 (145)
T 2duw_A 94 GAKTLWLQLGVI----NEQAAVLAREAGLSVV 121 (145)
T ss_dssp TCCEEECCTTCC----CHHHHHHHHTTTCEEE
T ss_pred CCCEEEEcCChH----HHHHHHHHHHcCCEEE
Confidence 345677777666 5677777777788777
No 114
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=58.23 E-value=10 Score=34.10 Aligned_cols=77 Identities=8% Similarity=0.039 Sum_probs=48.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhc----cceeEEe---cC-CHHhHHH-----
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARD----GKLAIFA---AG-DSAVVQW----- 72 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~----g~l~i~~---gG-~~~~~~~----- 72 (220)
.+++.+++|.++||+++..+-...++.+.+.+.++......|.++.+.+.. ..-.++. +| +.++.++
T Consensus 217 ~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~~~ 296 (529)
T 1ygy_A 217 EALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGTDV 296 (529)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHHHH
T ss_pred HHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHHHH
Confidence 367789999999999999999999999998876554322235554333221 1213333 53 5566554
Q ss_pred HHHHHHHhcc
Q 044696 73 LTPLFEVLGK 82 (220)
Q Consensus 73 ~~~~l~~~~~ 82 (220)
++.+.+.++.
T Consensus 297 ~~~l~~~l~~ 306 (529)
T 1ygy_A 297 AESVRLALAG 306 (529)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHcC
Confidence 5555555554
No 115
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=57.44 E-value=5.8 Score=34.44 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=37.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCC
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGG 50 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~ 50 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++...---|...
T Consensus 195 ~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~ 239 (381)
T 3oet_A 195 TLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEG 239 (381)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTT
T ss_pred HHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeecccc
Confidence 567889999999999999999999999999987766544445543
No 116
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=57.03 E-value=48 Score=28.05 Aligned_cols=65 Identities=6% Similarity=-0.041 Sum_probs=43.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHh-HHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAV-VQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~-~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+++++.|+.|++-|+.-.. . -.+.-.+.|..++.-.. .+.++++++.
T Consensus 202 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~ 273 (382)
T 1rvk_A 202 RLMIDAFHWYSRTDALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKA 273 (382)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHc
Confidence 5778875 457999999999999999999999985321 1 11122455666555444 5566666654
No 117
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=56.56 E-value=54 Score=27.43 Aligned_cols=67 Identities=9% Similarity=-0.019 Sum_probs=46.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.-.. . -.+.-.+.+..++.-...+.++.+++.=+
T Consensus 191 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~ 263 (359)
T 1mdl_A 191 GIMVDYNQSLDVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGA 263 (359)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCeEECCCChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 4778875 347899999999999999999999985321 1 11233456776666555667777776543
No 118
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=56.20 E-value=46 Score=28.22 Aligned_cols=32 Identities=9% Similarity=-0.105 Sum_probs=26.8
Q ss_pred HHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696 167 GMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD 202 (220)
Q Consensus 167 ~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~ 202 (220)
..+.+.+++. |+++|+.+.+.+++......-+
T Consensus 335 ~~v~~la~~~----gV~tP~~~~l~~l~~~~~~~~~ 366 (404)
T 3c7a_A 335 IVFKGVAIAA----GVAIPSNDKLIMWAQEKIGKEY 366 (404)
T ss_dssp HHHHHHHHHH----TCCCHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHh----CCCCchHHHHHHHHHHHhCcch
Confidence 4678999999 9999999999999887765543
No 119
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=55.68 E-value=4.2 Score=35.29 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=34.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCC--cEEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDC--WAVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~--~~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++ ..+|.
T Consensus 192 ~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV 233 (380)
T 2o4c_A 192 PRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDV 233 (380)
T ss_dssp HHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESC
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeee
Confidence 57788999999999999999999999999987664 34665
No 120
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=53.69 E-value=5.5 Score=33.79 Aligned_cols=39 Identities=13% Similarity=0.215 Sum_probs=33.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVD 44 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~ld 44 (220)
..++.+++|.++||+|+..+-...++.+.+++..+. .+|
T Consensus 240 ~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lD 280 (335)
T 2g76_A 240 NTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALD 280 (335)
T ss_dssp HHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEES
T ss_pred HHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEe
Confidence 567889999999999999999989999999886543 466
No 121
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=52.84 E-value=12 Score=31.16 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=33.2
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-...++.+.+++..+. .+|.
T Consensus 217 ~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv 258 (307)
T 1wwk_A 217 ERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDV 258 (307)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESC
T ss_pred HHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEec
Confidence 467889999999999999998889999999886554 4664
No 122
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=52.55 E-value=4.9 Score=33.68 Aligned_cols=40 Identities=10% Similarity=0.240 Sum_probs=33.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++. .+|.
T Consensus 217 ~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv 258 (313)
T 2ekl_A 217 PQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDV 258 (313)
T ss_dssp HHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESC
T ss_pred HHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEec
Confidence 467889999999999999999999999999876653 4563
No 123
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=52.45 E-value=7.4 Score=32.81 Aligned_cols=37 Identities=8% Similarity=0.066 Sum_probs=31.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWA 42 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 42 (220)
.+++.+++|.++||+|+..+-...++.+.+.+..+..
T Consensus 225 ~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~g 261 (334)
T 2dbq_A 225 ERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAG 261 (334)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSE
T ss_pred HHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeE
Confidence 4567889999999999999999999999998866654
No 124
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=52.41 E-value=4.8 Score=33.98 Aligned_cols=40 Identities=10% Similarity=0.209 Sum_probs=34.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++. .+|.
T Consensus 219 ~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV 260 (331)
T 1xdw_A 219 DFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDV 260 (331)
T ss_dssp HHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEec
Confidence 467889999999999999999999999999987654 4665
No 125
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=52.10 E-value=5 Score=33.95 Aligned_cols=40 Identities=13% Similarity=0.284 Sum_probs=33.8
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++. .+|.
T Consensus 218 ~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV 259 (333)
T 1dxy_A 218 AAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDT 259 (333)
T ss_dssp HHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESS
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEec
Confidence 467889999999999999999999999999886654 4664
No 126
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=52.10 E-value=5.2 Score=34.24 Aligned_cols=40 Identities=10% Similarity=0.164 Sum_probs=34.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+++..+-...++.+.+++..+. .+|.
T Consensus 241 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV 282 (351)
T 3jtm_A 241 ELIGKLKKGVLIVNNARGAIMERQAVVDAVESGHIGGYSGDV 282 (351)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhcCCCCCEEEECcCchhhCHHHHHHHHHhCCccEEEeCC
Confidence 567889999999999999999999999999987765 4554
No 127
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=51.83 E-value=70 Score=27.26 Aligned_cols=67 Identities=15% Similarity=0.151 Sum_probs=47.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----Hh-hccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GA-RDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a-~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. .-+++++.++++.+++.|+.|++-|+.... . -. +.-.+.|..++.-...+.++++++.=+
T Consensus 197 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~ 270 (389)
T 3ozy_A 197 EILVDANQSLGRHDALAMLRILDEAGCYWFEEPLSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDA 270 (389)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHTTCSEEESCSCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTC
T ss_pred eEEEECCCCcCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 5678874 557899999999999999999999996421 1 11 233456666666555666777776543
No 128
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=51.62 E-value=48 Score=28.28 Aligned_cols=65 Identities=12% Similarity=0.024 Sum_probs=43.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . -.+.-.+.+..++.-...+.++.+++.
T Consensus 209 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 279 (393)
T 2og9_A 209 PLMVDANQQWDRPTAQRMCRIFEPFNLVWIEEPLDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRH 279 (393)
T ss_dssp CEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHC
Confidence 5788875 457999999999999999999999985321 1 112224556665554445556666654
No 129
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=50.55 E-value=76 Score=27.10 Aligned_cols=65 Identities=14% Similarity=0.003 Sum_probs=43.7
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.... . -.+.-...|..+..-.....++++++.
T Consensus 221 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 291 (390)
T 3ugv_A 221 ALMVDFNQGLDMAEAMHRTRQIDDLGLEWIEEPVVYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQA 291 (390)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHc
Confidence 5778874 457899999999999999999999986321 1 112223456665554445556666654
No 130
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=50.51 E-value=8.2 Score=31.41 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=24.7
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
+.+.+|++++|+++ . ..++.++++++|++++++
T Consensus 209 ~~l~~g~~viDv~~-~---~t~ll~~a~~~g~~~v~g 241 (275)
T 2hk9_A 209 DLIKKDHVVVDIIY-K---ETKLLKKAKEKGAKLLDG 241 (275)
T ss_dssp GGCCTTSEEEESSS-S---CCHHHHHHHHTTCEEECS
T ss_pred HHcCCCCEEEEcCC-C---hHHHHHHHHHCcCEEECC
Confidence 45788999999999 2 234566677789988865
No 131
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=50.13 E-value=1.1e+02 Score=26.02 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=45.5
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.... .-.+.-...|..+..-.....++++++.
T Consensus 215 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 285 (383)
T 3toy_A 215 ALMLDFNQSLDPAEATRRIARLADYDLTWIEEPVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAA 285 (383)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHc
Confidence 5778874 557899999999999999999999986431 1122234566666655555667777764
No 132
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=49.41 E-value=55 Score=27.88 Aligned_cols=67 Identities=9% Similarity=0.123 Sum_probs=47.0
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
-.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . -.+.-...|..++.-...+.++.+++.=
T Consensus 195 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 267 (391)
T 2qgy_A 195 LPLMLDLAVPEDLDQTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRN 267 (391)
T ss_dssp SCEEEECCCCSCHHHHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTT
T ss_pred CEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEeCCCChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcC
Confidence 35778875 347899999999999999999999986321 1 1122345677666655566777777653
No 133
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=48.74 E-value=79 Score=26.91 Aligned_cols=66 Identities=11% Similarity=0.097 Sum_probs=45.9
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
-.+.||.. ..+++++.++.+++.+.|+.|++-|+.... . -.+.-.+.|..++.-...+.++++++.
T Consensus 190 ~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 261 (397)
T 2qde_A 190 VDLFIDINGAWTYDQALTTIRALEKYNLSKIEQPLPAWDLDGMARLRGKVATPIYADESAQELHDLLAIINK 261 (397)
T ss_dssp SCEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHhCCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc
Confidence 35778875 347899999999999999999999986321 1 112234566666655455667777764
No 134
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=48.55 E-value=87 Score=26.66 Aligned_cols=65 Identities=9% Similarity=0.035 Sum_probs=43.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.... .-.+.-...|..++.-...+.++++++.
T Consensus 211 ~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 281 (403)
T 2ox4_A 211 DIIVENHGHTDLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLED 281 (403)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5778875 457999999999999999999999985321 1112224455555544445566666654
No 135
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=48.53 E-value=2.7 Score=35.39 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=29.7
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP 46 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap 46 (220)
+.+++|+.|+++++..|. .+++...+.+++..|+|.+
T Consensus 205 ~~l~~G~~V~~ig~~~p~-~~el~~~~~~~a~v~vD~~ 241 (322)
T 1omo_A 205 EWVEEGTHINAIGADGPG-KQELDVEILKKAKIVVDDL 241 (322)
T ss_dssp GGCCTTCEEEECSCCSTT-CCCBCHHHHHTEEEEESCH
T ss_pred HHcCCCeEEEECCCCCCC-ccccCHHHHhcCeEEECCH
Confidence 457889999999999998 7777777777777889864
No 136
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=48.46 E-value=8.6 Score=32.85 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=34.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-...++.+.+++.++. .+|.
T Consensus 236 ~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV 277 (352)
T 3gg9_A 236 ADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDV 277 (352)
T ss_dssp HHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECC
T ss_pred HHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecc
Confidence 567889999999999999999999999999988765 4553
No 137
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=48.03 E-value=12 Score=31.86 Aligned_cols=40 Identities=8% Similarity=0.150 Sum_probs=34.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+.+..+. .+|.
T Consensus 221 ~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV 262 (343)
T 2yq5_A 221 KQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDT 262 (343)
T ss_dssp HHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESC
T ss_pred HHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecc
Confidence 467889999999999999999999999999887654 4553
No 138
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=47.32 E-value=7.3 Score=32.74 Aligned_cols=40 Identities=10% Similarity=0.151 Sum_probs=34.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+.+.+.+++..+. .+|.
T Consensus 214 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV 255 (315)
T 3pp8_A 214 ELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDV 255 (315)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCC
Confidence 467789999999999999999999999999887655 4554
No 139
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=47.12 E-value=87 Score=26.59 Aligned_cols=65 Identities=12% Similarity=-0.094 Sum_probs=45.7
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.-.. . -.+.-.+.|..++.-...+.++.+++.
T Consensus 212 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 282 (392)
T 1tzz_A 212 QLAVDANGRFNLETGIAYAKMLRDYPLFWYEEVGDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRY 282 (392)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHcCCCeecCCCChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHc
Confidence 5778885 457999999999999999999999986321 1 112224566666654456677777774
No 140
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=46.96 E-value=72 Score=27.56 Aligned_cols=65 Identities=8% Similarity=-0.022 Sum_probs=46.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCC-----hHHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGG-----DIGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~-----~~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ ..+++++.++++++++.|+.|++-|+... ..-.+.-.+.|..++.-.....++.+++.
T Consensus 222 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 292 (418)
T 3r4e_A 222 HLLHDGHHRYTPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQN 292 (418)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHT
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHc
Confidence 5788885 45789999999999999999999998532 11222334567766655555567777764
No 141
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=46.59 E-value=1.1e+02 Score=25.88 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=46.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.... . -.+.-.+.|..++.-.....++.+++.=
T Consensus 196 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 267 (383)
T 3i4k_A 196 SLRIDINARWDRRTALHYLPILAEAGVELFEQPTPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQ 267 (383)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHTTCCEEESCSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcC
Confidence 5778874 457899999999999999999999986531 1 1122245666666555566677777643
No 142
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=45.83 E-value=79 Score=27.01 Aligned_cols=65 Identities=11% Similarity=-0.008 Sum_probs=45.7
Q ss_pred CEEEecCC-C-CHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTTS-S-HPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~ST-~-~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||... . +++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 207 ~l~vDaN~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 278 (394)
T 3mkc_A 207 DMMVDYLYRFTDWYEVARLLNSIEDLELYFAEATLQHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITK 278 (394)
T ss_dssp EEEEECTTCCCCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHT
T ss_pred eEEEeCCCCCCCHHHHHHHHHHhhhcCCeEEECCCCchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHc
Confidence 57788864 3 6899999999999999999999986321 1122234566666665555667777764
No 143
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=44.72 E-value=88 Score=26.46 Aligned_cols=67 Identities=16% Similarity=0.045 Sum_probs=47.1
Q ss_pred CEEEecCC-CC-HHHHHHHHHHHHhcCCcEEEecCCCC-hH----HhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTTS-SH-PALAREIFKVARERDCWAVDAPVSGG-DI----GARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~ST-~~-p~~~~~la~~~~~~G~~~ldapV~g~-~~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||... .+ ++++.++++++++.|+.|++-|+... .. -.+.-.+.+..+..-.....++++++.=+
T Consensus 195 ~l~vDan~~~~d~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~ 268 (374)
T 3sjn_A 195 EVQIDLASKWHTCGHSAMMAKRLEEFNLNWIEEPVLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSN 268 (374)
T ss_dssp EEEEECTTTTCSHHHHHHHHHHSGGGCCSEEECSSCTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHC
T ss_pred eEEEECCCCCCCHHHHHHHHHHhhhcCceEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCC
Confidence 57888753 46 89999999999999999999998642 11 11223456776666556666777776533
No 144
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=44.24 E-value=1.3e+02 Score=25.28 Aligned_cols=65 Identities=11% Similarity=0.069 Sum_probs=46.7
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChHHh----hccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDIGA----RDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a----~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. ..+++++.++++.+++.|+ |++-|+. ..... +.-.+.+..++.-...+.++.+++.=+
T Consensus 191 ~l~vDan~~~~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~ 260 (379)
T 2rdx_A 191 KAMADANQGWRVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRG 260 (379)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTC
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 4678875 4578999999999999999 9999987 43322 223457777776555677788877543
No 145
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=44.16 E-value=89 Score=26.61 Aligned_cols=65 Identities=12% Similarity=0.060 Sum_probs=44.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . -.+.-.+.|..++.-...+.++++++.
T Consensus 217 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 287 (407)
T 2o56_A 217 DIIAEMHAFTDTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLEN 287 (407)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 5778885 447999999999999999999999986421 1 112224566665554455667777764
No 146
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=43.96 E-value=74 Score=27.16 Aligned_cols=66 Identities=12% Similarity=-0.047 Sum_probs=43.0
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
-.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . -.+.-.+.|..++.-...+.++.+++.
T Consensus 221 ~~l~vDan~~~~~~~ai~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 292 (398)
T 2pp0_A 221 FPLMVDANQQWDRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILG 292 (398)
T ss_dssp SCEEEECTTCSCHHHHHHHHHHHGGGTCSCEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHT
T ss_pred CeEEEECCCCCCHHHHHHHHHHHHHcCCceeeCCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 35788875 447899999999999999999999985321 1 111223455555544344556666554
No 147
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=43.89 E-value=1.1e+02 Score=25.93 Aligned_cols=65 Identities=9% Similarity=0.010 Sum_probs=43.8
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-HH----hhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-IG----ARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~~----a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++++++++.|+.|++-|+.... .. .+.-.+.+..++.-...+.++.+++.
T Consensus 192 ~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~ 262 (384)
T 2pgw_A 192 RLRLDANEGWSVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQ 262 (384)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHc
Confidence 4677874 457899999999999999999999984321 11 11224566666654455666777654
No 148
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=43.57 E-value=10 Score=32.54 Aligned_cols=36 Identities=8% Similarity=0.099 Sum_probs=31.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
..++.+++|.++||+|+..+-...++.+.+++..+.
T Consensus 251 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 286 (365)
T 4hy3_A 251 EAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV 286 (365)
T ss_dssp HHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE
T ss_pred HHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce
Confidence 567889999999999999999999999999876554
No 149
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=43.46 E-value=12 Score=32.77 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=33.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVD 44 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~ld 44 (220)
..++.+++|.++||+|+..+-..+++.+.+++..+. .+|
T Consensus 229 ~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalD 269 (416)
T 3k5p_A 229 AKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAID 269 (416)
T ss_dssp HHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEEC
T ss_pred HHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeC
Confidence 467889999999999999999999999999876654 355
No 150
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=43.26 E-value=1.1e+02 Score=26.18 Aligned_cols=65 Identities=8% Similarity=0.080 Sum_probs=44.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCC-h----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGG-D----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~-~----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++++++++.|+.|++-|+.-. . .-.+.-.+.|..+..-.....++++++.
T Consensus 201 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 271 (388)
T 3tcs_A 201 DLLIDANSCYTPDRAIEVGHMLQDHGFCHFEEPCPYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDM 271 (388)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHTTCCEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHH
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCeEEECCCCccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHc
Confidence 5788874 56789999999999999999999998632 1 1122224455555544445566777664
No 151
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=42.92 E-value=4.2 Score=34.88 Aligned_cols=32 Identities=16% Similarity=0.024 Sum_probs=17.0
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
..-.+||+++ .+.....+.+.+-+.|.+|+|.
T Consensus 76 ~~~DvVIn~~--P~~~~~~v~~a~l~~G~~~vD~ 107 (365)
T 2z2v_A 76 KEFELVIGAL--PGFLGFKSIKAAIKSKVDMVDV 107 (365)
T ss_dssp TTCSCEEECC--CHHHHHHHHHHHHHTTCCEEEC
T ss_pred hCCCEEEECC--ChhhhHHHHHHHHHhCCeEEEc
Confidence 3445666652 2333334555556666667664
No 152
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=42.23 E-value=8.9 Score=32.16 Aligned_cols=36 Identities=14% Similarity=0.134 Sum_probs=30.4
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
..++.+++|.++||+|+..+-...++.+.+++.++.
T Consensus 223 ~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~ 258 (320)
T 1gdh_A 223 ATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLA 258 (320)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEE
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCc
Confidence 466889999999999999988888899988876544
No 153
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=42.17 E-value=13 Score=30.92 Aligned_cols=39 Identities=15% Similarity=0.263 Sum_probs=31.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-...++.+.++ ..+. .+|.
T Consensus 214 ~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv 254 (311)
T 2cuk_A 214 ERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDV 254 (311)
T ss_dssp HHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESS
T ss_pred HHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEee
Confidence 4667899999999999999988889999888 5543 4664
No 154
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=41.98 E-value=18 Score=30.62 Aligned_cols=40 Identities=13% Similarity=0.261 Sum_probs=20.6
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+++..+-...++.+.+++..+. .+|.
T Consensus 243 ~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV 284 (340)
T 4dgs_A 243 SLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDV 284 (340)
T ss_dssp HHHHHTTTTCEEEECSCC--------------CCSSEEEESC
T ss_pred HHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCC
Confidence 466789999999999999999999999999886654 4554
No 155
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=41.94 E-value=84 Score=26.80 Aligned_cols=68 Identities=12% Similarity=0.133 Sum_probs=45.6
Q ss_pred CCEEEecCCC---CHHHHHHHHHHHHhcCCcEEEecCCCCh----HHhh--ccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 14 GAVYVDTTSS---HPALAREIFKVARERDCWAVDAPVSGGD----IGAR--DGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 14 g~~ivd~ST~---~p~~~~~la~~~~~~G~~~ldapV~g~~----~~a~--~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
-.+.||.... +++++.++.+.+++.|+.|++-|+.... .... .-.+.|..++.-...+.++.+++.=+
T Consensus 194 ~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~ 270 (401)
T 2hzg_A 194 GDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWLEEPFDAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGR 270 (401)
T ss_dssp SEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEEECCSCTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSC
T ss_pred CeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEEECCCCccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCC
Confidence 3577888644 6899999999999999999999985321 1111 22455655555445566777776533
No 156
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=41.76 E-value=81 Score=26.93 Aligned_cols=65 Identities=14% Similarity=0.068 Sum_probs=45.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++++.+++.|+.|++-|+.... . -.+.-.+.|..++.-...+.++++++.
T Consensus 220 ~l~vDan~~~~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 290 (410)
T 2gl5_A 220 DIIVEIHSLLGTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEK 290 (410)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5778885 447999999999999999999999986421 1 112224566666554445667777764
No 157
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=41.74 E-value=8.6 Score=32.44 Aligned_cols=40 Identities=10% Similarity=0.175 Sum_probs=34.0
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-..+++.+.+++.++. .+|.
T Consensus 220 ~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV 261 (333)
T 1j4a_A 220 ESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDV 261 (333)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEec
Confidence 466789999999999999999999999999987654 4664
No 158
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=41.74 E-value=1e+02 Score=26.29 Aligned_cols=65 Identities=15% Similarity=0.025 Sum_probs=47.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ .-+++++.++.+++++.|+.|++-|+.... .-.+.-.+.+..+..-.....++++++.
T Consensus 212 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 282 (400)
T 4dxk_A 212 DIMVEFHSMWQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLET 282 (400)
T ss_dssp EEEEECTTCBCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5778875 567899999999999999999999986321 1122335577777665566677788774
No 159
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=41.56 E-value=81 Score=26.75 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=56.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHhcc-ceecC
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMG 87 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G 87 (220)
.+.||.. ..+++++.++.+.+.+.|+.|++-|+.... . -.+.-.+.+..++.-...+.++.+++.=+. ++-+
T Consensus 210 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i- 288 (388)
T 2nql_A 210 KIAADMHWNQTPERALELIAEMQPFDPWFAEAPVWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQP- 288 (388)
T ss_dssp EEEEECCSCSCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECC-
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEe-
Confidence 4678874 457899999999999999999999985321 1 111224455655554445566666654222 2222
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 044696 88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~ 123 (220)
|+ .. +-+.-..+...+|+++|+.
T Consensus 289 --------k~----~~-GGit~~~~i~~~A~~~g~~ 311 (388)
T 2nql_A 289 --------EM----GH-KGITNFIRIGALAAEHGID 311 (388)
T ss_dssp --------CH----HH-HCHHHHHHHHHHHHHHTCE
T ss_pred --------cC----CC-CCHHHHHHHHHHHHHcCCe
Confidence 11 11 2333445556777777765
No 160
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=41.39 E-value=50 Score=27.76 Aligned_cols=97 Identities=13% Similarity=0.029 Sum_probs=59.5
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHhcc-ceecC
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMG 87 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G 87 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.-.. . -.+.-.+.+..+..-.....++++++.=+. ++-+-
T Consensus 185 ~l~vDan~~~~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 264 (354)
T 3jva_A 185 KLRLDANQAWTPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIK 264 (354)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 5778874 567899999999999999999999996431 1 112234566666655555566777765333 33221
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Q 044696 88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124 (220)
Q Consensus 88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~ 124 (220)
. ...+-+.-..+...+|+++|++.
T Consensus 265 ~-------------~~~GGit~~~~i~~~A~~~gi~~ 288 (354)
T 3jva_A 265 L-------------MKCGGIHEALKINQICETAGIEC 288 (354)
T ss_dssp H-------------HHHTSHHHHHHHHHHHHHTTCEE
T ss_pred c-------------hhcCCHHHHHHHHHHHHHcCCeE
Confidence 1 11112334445567777888774
No 161
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=40.71 E-value=15 Score=31.15 Aligned_cols=36 Identities=14% Similarity=0.246 Sum_probs=30.3
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
.+++.+++|.++||+|+..+....++.+.+.+..+.
T Consensus 241 ~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~ 276 (348)
T 2w2k_A 241 AFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLL 276 (348)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCce
Confidence 356788999999999999999889999999875543
No 162
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=40.44 E-value=1.7e+02 Score=24.86 Aligned_cols=67 Identities=10% Similarity=0.083 Sum_probs=47.1
Q ss_pred CEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCCh--HH----hhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGD--IG----ARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~--~~----a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||. ..-+++++.++++++++.|+.|++-|+.... .. .+.-.+.+..+..-.....++++++.=+
T Consensus 201 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a 274 (392)
T 3ddm_A 201 PLMADANQGWDLPRARQMAQRLGPAQLDWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARS 274 (392)
T ss_dssp CEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTC
T ss_pred eEEEeCCCCCCHHHHHHHHHHHHHhCCCEEECCCCccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCC
Confidence 678887 4567899999999999999999999996532 11 1223456666666555666777776433
No 163
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=40.21 E-value=17 Score=30.67 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=33.1
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+....++.+.+.+.++. .+|.
T Consensus 236 ~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv 277 (333)
T 3ba1_A 236 EVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDV 277 (333)
T ss_dssp HHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESC
T ss_pred HHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEec
Confidence 356778999999999999999999999999886554 4564
No 164
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=39.95 E-value=94 Score=26.19 Aligned_cols=67 Identities=13% Similarity=0.088 Sum_probs=46.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.-.. .-.+.-.+.+..+..-.....++++++.=+
T Consensus 186 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~ 258 (368)
T 3q45_A 186 TLRIDANQGWSVETAIETLTLLEPYNIQHCEEPVSRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQA 258 (368)
T ss_dssp EEEEECTTCBCHHHHHHHHHHHGGGCCSCEECCBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTC
T ss_pred eEEEECCCCCChHHHHHHHHHHhhcCCCEEECCCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCC
Confidence 5778863 457899999999999999999999985321 112233456776666555666777776433
No 165
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=39.80 E-value=65 Score=26.29 Aligned_cols=28 Identities=7% Similarity=-0.101 Sum_probs=23.5
Q ss_pred HHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696 166 MGMGVDVVEESEDERVVVLPGAALGKQLFSAM 197 (220)
Q Consensus 166 ~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a 197 (220)
...+++.+++. |+|+|..+...++.+..
T Consensus 265 ~G~vv~~a~~~----gv~tP~~~~l~~li~~~ 292 (307)
T 3ego_A 265 IGYLLKEASLQ----GLDAVHLEFLYGSIKAL 292 (307)
T ss_dssp HHHHHHHHHHT----TCCCHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHc----CCCCcHHHHHHHHHHHH
Confidence 46788999999 99999999988877643
No 166
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=39.69 E-value=10 Score=32.47 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=33.7
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+++..+-..+++.+.+++.++. .+|.
T Consensus 242 ~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDV 283 (364)
T 2j6i_A 242 ELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDV 283 (364)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEec
Confidence 466889999999999999999999999999887644 4664
No 167
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=38.26 E-value=90 Score=26.42 Aligned_cols=65 Identities=12% Similarity=0.037 Sum_probs=45.4
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhc-CCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARER-DCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~-G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+.+. |+.|++-|+.... . -.+.-.+.+..++.-...+.++.+++.
T Consensus 186 ~l~vDan~~~~~~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 257 (382)
T 2gdq_A 186 TMILDANQSYDAAAAFKWERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQ 257 (382)
T ss_dssp EEEEECTTCCCHHHHHTTHHHHTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5778875 45799999999999999 9999999986321 1 112234566666655555667777764
No 168
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=38.07 E-value=62 Score=27.65 Aligned_cols=101 Identities=6% Similarity=-0.099 Sum_probs=59.3
Q ss_pred CCCHHHHHHHHHHHHhcCCcEEEe--cCCCChH-----H-h---hccceeEEecCCHHhHHHHHHHHHHhcc-ceec-CC
Q 044696 22 SSHPALAREIFKVARERDCWAVDA--PVSGGDI-----G-A---RDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFM-GG 88 (220)
Q Consensus 22 T~~p~~~~~la~~~~~~G~~~lda--pV~g~~~-----~-a---~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~-G~ 88 (220)
..++++..++++.+.+.|+.++++ |++.... . + ..-++..++=+....++++...+...+. .+++ .+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if~~ 109 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTFIA 109 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEEec
Confidence 578899999999999999999998 5543210 0 1 1123444554566665555554444455 4444 33
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 044696 89 AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 89 ~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~ 123 (220)
.-.-+..+ -.|.-.--++..+.+++.+++++|.+
T Consensus 110 ~Sd~h~~~-~l~~s~~e~l~~~~~~v~~a~~~g~~ 143 (370)
T 3rmj_A 110 TSPIHMEY-KLKMKPKQVIEAAVKAVKIAREYTDD 143 (370)
T ss_dssp CSHHHHHH-TTCCCHHHHHHHHHHHHHHHTTTCSC
T ss_pred CcHHHHHH-HhCCCHHHHHHHHHHHHHHHHHcCCE
Confidence 32223222 22333344566777788888888754
No 169
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=37.00 E-value=1.2e+02 Score=25.64 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=44.2
Q ss_pred CEEEec-CCCCHHHHHHHHHHHHh--cCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDT-TSSHPALAREIFKVARE--RDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~-ST~~p~~~~~la~~~~~--~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||. ..-+++++.++.+++++ .++.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 188 ~L~vDaN~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 260 (379)
T 3r0u_A 188 KFRFDANQGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDE 260 (379)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHT
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHc
Confidence 678887 45678999999999999 88999999986421 1112234556665554445556666663
No 170
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=36.68 E-value=2e+02 Score=24.48 Aligned_cols=65 Identities=12% Similarity=0.028 Sum_probs=43.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . -.+.-.+.|..++.-...+.++++++.
T Consensus 212 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 282 (410)
T 2qq6_A 212 EVAIDMHGRFDIPSSIRFARAMEPFGLLWLEEPTPPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAK 282 (410)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcCCCeEECCCChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 5778875 457999999999999999999999986421 1 112223455555443344556666654
No 171
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=36.57 E-value=1.9e+02 Score=24.15 Aligned_cols=65 Identities=18% Similarity=0.078 Sum_probs=44.3
Q ss_pred CEEEecCC-CCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTTS-SHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~ST-~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||... .+++++.++.+++++.|+.|++-|+.... . -.+.-.+.+..++.-...+.++++++.
T Consensus 190 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 260 (370)
T 1nu5_A 190 SVRVDVNQGWDEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQNGVAILADESLSSLSSAFELARD 260 (370)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHHTCCEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCcceEeCCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHh
Confidence 47788743 47899999999999999999999985321 1 112224566666654455667777765
No 172
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=36.41 E-value=6.3 Score=32.32 Aligned_cols=36 Identities=14% Similarity=0.255 Sum_probs=23.7
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVS 48 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~ 48 (220)
+.++.+++|+.. .|..+ .+.++++++|+.++|+..+
T Consensus 203 l~~~~~v~DlvY-~P~~T-~ll~~A~~~G~~~i~Gl~M 238 (271)
T 1npy_A 203 IDNASVAFDVVA-MPVET-PFIRYAQARGKQTISGAAV 238 (271)
T ss_dssp HHHCSEEEECCC-SSSSC-HHHHHHHHTTCEEECHHHH
T ss_pred cCCCCEEEEeec-CCCCC-HHHHHHHHCCCEEECCHHH
Confidence 345777888876 44444 6667777778777776643
No 173
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=36.40 E-value=73 Score=27.29 Aligned_cols=66 Identities=14% Similarity=0.001 Sum_probs=45.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCC-hHH----hhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGG-DIG----ARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~-~~~----a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.-. ... .+.-.+.|..+..-.....++++++.=
T Consensus 193 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 264 (393)
T 4dwd_A 193 VIGFDANNGYSVGGAIRVGRALEDLGYSWFEEPVQHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG 264 (393)
T ss_dssp CEEEECTTCCCHHHHHHHHHHHHHTTCSEEECCSCTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC
Confidence 6888975 46789999999999999999999999632 111 122345666655544455667776543
No 174
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=36.31 E-value=1.9e+02 Score=24.26 Aligned_cols=164 Identities=13% Similarity=0.050 Sum_probs=88.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE---ecCCCChHHhhccceeEEec-CCHHhHHHHHHHHHHhc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD---APVSGGDIGARDGKLAIFAA-GDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld---apV~g~~~~a~~g~l~i~~g-G~~~~~~~~~~~l~~~~ 81 (220)
-++++++.|.+|-+.-|++|-.--.+-+.+.++.+..-. +.|-|. +|+..+=-+ -+++.++++-.+-+..+
T Consensus 161 kii~~lpEgAII~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVPgt-----~Gq~~~g~~yAtEEqIeklveLaksa~ 235 (358)
T 2b0j_A 161 KFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCVPEM-----KGQVYIAEGYASEEAVNKLYEIGKIAR 235 (358)
T ss_dssp HHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCTTT-----CCCEEEEESSSCHHHHHHHHHHHHHHH
T ss_pred HHHhhCcCCCEEecccCCCHHHHHHHHHHhCcccCCeeccCCCCCCCC-----CCccccccccCCHHHHHHHHHHHHHhC
Confidence 368899999999999999998877777666555443222 223333 455433222 26678888999999888
Q ss_pred c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHhc----------cCCChHHHHhhhhhhc
Q 044696 82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFA-DEAGLDVRKWRDAVKG----------GAAGSMAMELYGERMI 149 (220)
Q Consensus 82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la-~~~Gl~~~~~~~~l~~----------~~~~s~~~~~~~~~~~ 149 (220)
+ .|.+=..=.+....|. ..+.+..++++.+-.... +-.|.+.+.+-..+.. ..+-..+.+..-|..+
T Consensus 236 k~ay~vPAdl~SpV~DMg-s~vTAv~~AGiL~Y~~~vtkIlgAP~~mie~q~~esL~tiasLve~~GI~gm~k~LnP~aL 314 (358)
T 2b0j_A 236 GKAFKMPANLIGPVCDMC-SAVTATVYAGLLAYRDAVTKILGAPADFAQMMADEALTQIHNLMKEKGIANMEEALDPAAL 314 (358)
T ss_dssp SCEEEEEHHHHHHHHSTT-HHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHSCGGGG
T ss_pred CCeEecchhhccchhhhH-HHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcCHHHH
Confidence 8 5544211122223332 245556666666666444 4455554322211111 1122223333334433
Q ss_pred cccCCCCchhhHHHHHHHHHHHHHhhc
Q 044696 150 EKDFRPGGFAEYMVKDMGMGVDVVEES 176 (220)
Q Consensus 150 ~~~~~~~f~~~~~~KD~~~~~~~a~~~ 176 (220)
-+..+ +..+.-..+++..+++..++.
T Consensus 315 ~~sA~-SM~~~~~q~~L~~aLk~Lek~ 340 (358)
T 2b0j_A 315 LGTAD-SMCFGPLAEILPTALKVLEKH 340 (358)
T ss_dssp GGTGG-GGCSGGGTTHHHHHHHHHHHT
T ss_pred HhHHh-hcccChhhhhHHHHHHHHHHh
Confidence 33322 222333456777777777665
No 175
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=36.16 E-value=87 Score=27.11 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=45.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ ..+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 228 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 298 (424)
T 3v3w_A 228 HLLHDVHHRLTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQN 298 (424)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHT
T ss_pred cEEEeCCCCCCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHc
Confidence 6788875 457899999999999999999999986321 1122234567766655445566777764
No 176
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=35.86 E-value=87 Score=25.66 Aligned_cols=52 Identities=13% Similarity=-0.036 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 23 SHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 23 ~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+++.+.+.++...+.|+++||--.-.+.+++. .++.+ +-++++.|+++.+.
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~------~v~~~-eE~~Rv~pvi~~l~ 77 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGAT------RVDPA-VETSRVIPVVKELA 77 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC---------------------HHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCC------CCCHH-HHHHHHHHHHHHhh
Confidence 478999999999999999999987533333322 23333 34577777777763
No 177
>3qe9_Y Exonuclease 1; exonuclease, hydrolase-DNA complex; HET: DNA; 2.51A {Homo sapiens} PDB: 3qeb_Z* 3qea_Z*
Probab=35.66 E-value=52 Score=27.94 Aligned_cols=50 Identities=22% Similarity=0.279 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHHHHhcCCcEEEecCCCCh---HHhhccceeEEecCCHHhH
Q 044696 21 TSSHPALAREIFKVARERDCWAVDAPVSGGD---IGARDGKLAIFAAGDSAVV 70 (220)
Q Consensus 21 ST~~p~~~~~la~~~~~~G~~~ldapV~g~~---~~a~~g~l~i~~gG~~~~~ 70 (220)
+.++|+....+-+.++..|+.|+.+|.-.-. ..+..|....++++|.+.+
T Consensus 123 ~~vt~~~~~~i~~~L~~~gIp~i~ap~EADaqiA~La~~g~~~~I~S~D~Dll 175 (352)
T 3qe9_Y 123 INITHAMAHKVIKAARSQGVDCLVAPYEADAQLAYLNKAGIVQAIITEDSALL 175 (352)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEECSSCHHHHHHHHHHTTSCSEEECSCGGGG
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEECCcchHHHHHHHHHCCCeEEEEeCCcCcc
Confidence 5678999999999999999999999932111 1245677788999999864
No 178
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=35.50 E-value=24 Score=31.54 Aligned_cols=37 Identities=11% Similarity=0.212 Sum_probs=29.8
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecC
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPV 47 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV 47 (220)
+.++++.++||.| .|.....+.+.|.+.|++|+|-.+
T Consensus 79 aLl~~~DvVIN~s--~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 79 STLEENDFLIDVS--IGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp GGCCTTCEEEECC--SSSCHHHHHHHHHHHTCEEEESSC
T ss_pred HHhcCCCEEEECC--ccccCHHHHHHHHHcCCCEEECCC
Confidence 3556668999855 566778889999999999999976
No 179
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=35.25 E-value=26 Score=28.77 Aligned_cols=54 Identities=15% Similarity=0.095 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCc-EEEecCCCChHH-------hhccceeEEecCCH---HhHHHHHHHHH--Hhcc
Q 044696 29 REIFKVARERDCW-AVDAPVSGGDIG-------ARDGKLAIFAAGDS---AVVQWLTPLFE--VLGK 82 (220)
Q Consensus 29 ~~la~~~~~~G~~-~ldapV~g~~~~-------a~~g~l~i~~gG~~---~~~~~~~~~l~--~~~~ 82 (220)
.++...+-++|.+ +++-|+...... +++....++++=.. ..+.+++.+++ .+|+
T Consensus 76 ~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~iG~ 142 (332)
T 2glx_A 76 REQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRIGR 142 (332)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTTSS
T ss_pred HHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCCCC
Confidence 3444444455654 456676655543 22233345554322 34566677665 3554
No 180
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=35.20 E-value=71 Score=27.31 Aligned_cols=65 Identities=17% Similarity=0.008 Sum_probs=47.0
Q ss_pred CEEEecCCC--CHHHHHHHHHHHHhcCCcEEEecCCCC-h----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTTSS--HPALAREIFKVARERDCWAVDAPVSGG-D----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~ST~--~p~~~~~la~~~~~~G~~~ldapV~g~-~----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+.. +++++.++++++++.|+.|++-|+... . .-.+.-.+.|..++.-.....++++++.
T Consensus 202 ~l~vDan~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 273 (394)
T 3mqt_A 202 DMMVDCLYRWTDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEK 273 (394)
T ss_dssp EEEEECTTCCSCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHH
T ss_pred eEEEECCCCCCCHHHHHHHHHHHhhcCCeEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 578888643 689999999999999999999999632 1 1122234677777765566677777764
No 181
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=35.06 E-value=2e+02 Score=24.12 Aligned_cols=67 Identities=13% Similarity=0.157 Sum_probs=46.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+.... . -.+.-...|..+..-.....++++++.=+
T Consensus 199 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 271 (372)
T 3tj4_A 199 RIAIDGNGKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGA 271 (372)
T ss_dssp EEEEECTTCCCHHHHHHHHHHTTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTC
T ss_pred cEEeeCCCCCCHHHHHHHHHHHhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCC
Confidence 5778874 457899999999999999999999996431 1 11223456776666555666777776533
No 182
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=35.02 E-value=1e+02 Score=26.74 Aligned_cols=65 Identities=12% Similarity=0.066 Sum_probs=45.2
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ ..+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 205 ~L~vDan~~~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 275 (433)
T 3rcy_A 205 DLLFGTHGQFTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLRE 275 (433)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHT
T ss_pred eEEEeCCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHc
Confidence 5778874 567899999999999999999999986421 1112234566666655555666777654
No 183
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=34.69 E-value=1.4e+02 Score=25.01 Aligned_cols=70 Identities=14% Similarity=0.118 Sum_probs=48.3
Q ss_pred cCCC-CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChH-----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 10 ALNP-GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDI-----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 10 ~~~~-g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~-----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
...+ -.+.||.. .-+++++.++.+++++.|+.|++-|+..... -.+.-.+.+..+..-.....++++++.
T Consensus 184 ~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~ 260 (370)
T 1chr_A 184 SLGSKAYLRVDVNQAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARD 260 (370)
T ss_dssp HSSTTCCEEEECTTCCCTTHHHHHTHHHHTTTEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTT
T ss_pred hcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 3444 36888873 4568899999999999999999999965421 112234567776665556667777764
No 184
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=33.92 E-value=1.4e+02 Score=23.71 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=49.7
Q ss_pred CCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHH-------hhcc-ceeEEecCCHHh-HHHHHHHHHHhcc-
Q 044696 13 PGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIG-------ARDG-KLAIFAAGDSAV-VQWLTPLFEVLGK- 82 (220)
Q Consensus 13 ~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~-------a~~g-~l~i~~gG~~~~-~~~~~~~l~~~~~- 82 (220)
+..++||+| +|+...+..+.+.++|+..|=+..--.+.. +++. ...++++.+-.. ..-...+++..++
T Consensus 45 ~~DvvIDfT--~p~a~~~~~~~a~~~g~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~~aa~~ 122 (245)
T 1p9l_A 45 NTEVVIDFT--HPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAKQAARF 122 (245)
T ss_dssp TCCEEEECS--CTTTHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHHHHGGG
T ss_pred CCcEEEEcc--ChHHHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHHHHHhh
Confidence 457999999 677888899999999998876644222321 1112 445666665321 2223333333333
Q ss_pred --------ceecCC--CCHHHHHHHHH
Q 044696 83 --------PTFMGG--AGCGQSCKIAN 99 (220)
Q Consensus 83 --------~~~~G~--~G~a~~~Kl~~ 99 (220)
.+|--. .-+|++++|..
T Consensus 123 ~~dieIiE~HH~~K~DaPSGTA~~lae 149 (245)
T 1p9l_A 123 FDSAEVIELHHPHKADAPSGTAARTAK 149 (245)
T ss_dssp CSEEEEEEEECTTCCSSSCHHHHHHHH
T ss_pred cCCEEEEECcccCCCCCCCHHHHHHHH
Confidence 245553 45787777764
No 185
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=33.48 E-value=2e+02 Score=23.64 Aligned_cols=99 Identities=8% Similarity=-0.000 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCC-Ch-HHhhccce-eEEecCCH----HhHHHHHHHHHHhccceecCCCCHHHHHH
Q 044696 24 HPALAREIFKVARERDCWAVDAPVSG-GD-IGARDGKL-AIFAAGDS----AVVQWLTPLFEVLGKPTFMGGAGCGQSCK 96 (220)
Q Consensus 24 ~p~~~~~la~~~~~~G~~~ldapV~g-~~-~~a~~g~l-~i~~gG~~----~~~~~~~~~l~~~~~~~~~G~~G~a~~~K 96 (220)
+|+.....++.+.+.|+.||-.|.++ .- ...+...+ ++..||.. +.++.++..+++=+.=+-+|
T Consensus 187 d~e~i~~aariA~elGAD~VKt~~t~e~~~~vv~~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG--------- 257 (295)
T 3glc_A 187 DQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG--------- 257 (295)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHTCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES---------
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCHHHHHHHHHhCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH---------
Confidence 57766777888889999999999763 21 22223334 45556643 45566666666522222223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Q 044696 97 IANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG 133 (220)
Q Consensus 97 l~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~ 133 (220)
.|++..-....+..++.-.-..|.++++.++++..
T Consensus 258 --RnI~q~~dp~~~~~al~~ivh~~~s~~eA~~~~~~ 292 (295)
T 3glc_A 258 --RNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLS 292 (295)
T ss_dssp --HHHHTSSSHHHHHHHHHHHHHHCCCHHHHHHHHHT
T ss_pred --HHHhcCcCHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 12332233444555555555678888888877753
No 186
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=33.43 E-value=1.4e+02 Score=25.55 Aligned_cols=65 Identities=12% Similarity=0.040 Sum_probs=43.5
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChHHh----hccceeEEecCCHHhHHHHHHHHHH
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDIGA----RDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a----~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
-.+.||.. .-+++++.++.+++++.|+.|++-|+. ..... +.-.+.|..+..-.....++++++.
T Consensus 213 ~~l~vDaN~~w~~~~A~~~~~~l~~~~i~~iEqP~~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 282 (398)
T 4dye_A 213 VNLRVDPNAAWSVPDSVRAGIALEELDLEYLEDPCV-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRL 282 (398)
T ss_dssp SEEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSS-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHT
T ss_pred CeEEeeCCCCCCHHHHHHHHHHHhhcCCCEEcCCCC-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHh
Confidence 36788874 567899999999999999999999997 22221 1123455554443344556666654
No 187
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=33.43 E-value=81 Score=27.00 Aligned_cols=65 Identities=8% Similarity=-0.021 Sum_probs=46.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ .-+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 203 ~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 273 (401)
T 3sbf_A 203 HILHDVHERLFPNQAIQFAKEVEQYKPYFIEDILPPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIAN 273 (401)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSCEECSSCTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhc
Confidence 6788875 467899999999999999999999986321 1122334567766665556667777764
No 188
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=33.05 E-value=1.9e+02 Score=24.30 Aligned_cols=70 Identities=11% Similarity=0.043 Sum_probs=43.7
Q ss_pred cCCCCCEEEec-CCCCHHHHHHHHHHH--HhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 10 ALNPGAVYVDT-TSSHPALAREIFKVA--RERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 10 ~~~~g~~ivd~-ST~~p~~~~~la~~~--~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
....-.+.||. ..-+++++.++.+++ .+.++.|++-|+.-.. .-.+.-.+.|..+-.-.....++++++.
T Consensus 184 ~~~~~~l~vDaN~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 261 (365)
T 3ik4_A 184 AAPTAPLIVDGNCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQSGFAVAADESARSAHDVLRIARE 261 (365)
T ss_dssp HSSSCCEEEECTTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHH
T ss_pred hCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHh
Confidence 34345788998 456789999999999 7789999999986321 1112223444444333334455565554
No 189
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=33.03 E-value=14 Score=32.04 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=30.8
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
..++.+++|.++||+|+..+-..+++.+.+++..+.
T Consensus 268 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ 303 (393)
T 2nac_A 268 ETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLA 303 (393)
T ss_dssp HHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEE
T ss_pred HHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCee
Confidence 466789999999999999999999999999876543
No 190
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=32.92 E-value=1.4e+02 Score=25.75 Aligned_cols=65 Identities=12% Similarity=0.046 Sum_probs=45.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++++.+++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 230 ~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 300 (426)
T 4e4f_A 230 HLLHDMHHRLTPIEAARFGKSVEDYRLFWMEDPTPAENQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEE 300 (426)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTGGGCCSEEECCSCCSSGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHhhcCCCEEECCCChHHHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHc
Confidence 5778874 468899999999999999999999996421 1122334566666654445566777764
No 191
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=32.66 E-value=18 Score=29.52 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=24.0
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD 44 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld 44 (220)
+.+.++.+++|+++. |..+ .+.++++++|+.+++
T Consensus 218 ~~l~~~~~v~Dv~y~-p~~t-~ll~~a~~~G~~~~~ 251 (287)
T 1nvt_A 218 EKLREDMVVMDLIYN-PLET-VLLKEAKKVNAKTIN 251 (287)
T ss_dssp TTCCSSSEEEECCCS-SSSC-HHHHHHHTTTCEEEC
T ss_pred HHcCCCCEEEEeeeC-CccC-HHHHHHHHCCCEEeC
Confidence 456788999999984 5444 356677888887653
No 192
>1uxc_A FRUR (1-57), fructose repressor; DNA-binding protein, LACI family, transc regulation; NMR {Escherichia coli} SCOP: a.35.1.5 PDB: 1uxd_A
Probab=32.66 E-value=43 Score=20.91 Aligned_cols=21 Identities=24% Similarity=0.207 Sum_probs=18.4
Q ss_pred HHHHHcCCCHHHHHHHHhccC
Q 044696 115 VFADEAGLDVRKWRDAVKGGA 135 (220)
Q Consensus 115 ~la~~~Gl~~~~~~~~l~~~~ 135 (220)
.+|++.|+++.++-.+++...
T Consensus 5 diA~~aGVS~sTVSrvLng~~ 25 (65)
T 1uxc_A 5 EIARLAGVSRTTASYVINGKA 25 (65)
T ss_dssp HHHHHHTSCHHHHHHHHHTCT
T ss_pred HHHHHHCcCHHHHHHHHcCCC
Confidence 578999999999999998754
No 193
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=32.63 E-value=1.6e+02 Score=25.00 Aligned_cols=65 Identities=11% Similarity=-0.135 Sum_probs=43.4
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCC-hH----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGG-DI----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~-~~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+... .. -.+.-.+.|..+..-.....++++++.
T Consensus 194 ~l~vDan~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~ 264 (385)
T 3i6e_A 194 RVRVDYNQGLEIDEAVPRVLDVAQFQPDFIEQPVRAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHE 264 (385)
T ss_dssp EEEEECTTCCCGGGHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHc
Confidence 5788874 45688999999999999999999998642 11 112224455555544445556666654
No 194
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=32.52 E-value=34 Score=27.95 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=35.3
Q ss_pred CEEEecCCCCHHHHHHHHHHHHhcCCc-EEEecCCCChHH-------hhccceeEEecCCH---HhHHHHHHHHHHhcc
Q 044696 15 AVYVDTTSSHPALAREIFKVARERDCW-AVDAPVSGGDIG-------ARDGKLAIFAAGDS---AVVQWLTPLFEVLGK 82 (220)
Q Consensus 15 ~~ivd~ST~~p~~~~~la~~~~~~G~~-~ldapV~g~~~~-------a~~g~l~i~~gG~~---~~~~~~~~~l~~~~~ 82 (220)
.+++.++. |....++...+-++|.+ +++-|+.-.... +++....++++-.. ..+.+++.+++.+|+
T Consensus 71 D~V~i~tp--~~~h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~lG~ 147 (315)
T 3c1a_A 71 EAVIIATP--PATHAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVEHTQLFNPAWEALKADLTSIGP 147 (315)
T ss_dssp CEEEEESC--GGGHHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEECGGGGCHHHHHHHHTHHHHCS
T ss_pred CEEEEeCC--hHHHHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEeechhcCHHHHHHHHHHHHcCC
Confidence 44444443 33334455555566765 456677665533 22333345555433 356677777777776
No 195
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=32.51 E-value=2.2e+02 Score=24.01 Aligned_cols=64 Identities=8% Similarity=-0.075 Sum_probs=45.3
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChHHh----hccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDIGA----RDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a----~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. .-+++++.++++++++.|+ |++-|+. ..... +.-.+.|..+++-.....++++++.=
T Consensus 191 ~l~vDan~~~~~~~a~~~~~~l~~~~i-~iEqP~~-~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~ 259 (378)
T 3eez_A 191 IVLYDVNRGWTRQQALRVMRATEDLHV-MFEQPGE-TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDG 259 (378)
T ss_dssp EEEEECTTCCCHHHHHHHHHHTGGGTC-CEECCSS-SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTT
T ss_pred eEEEECCCCCCHHHHHHHHHHhccCCe-EEecCCC-CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcC
Confidence 5778874 5578999999999999999 9999997 33221 22345666666655566677777643
No 196
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=32.00 E-value=34 Score=23.06 Aligned_cols=31 Identities=32% Similarity=0.267 Sum_probs=25.0
Q ss_pred chhhcCCCC-CEEEecCCCCHHHHHHHHHHHH
Q 044696 6 GIVSALNPG-AVYVDTTSSHPALAREIFKVAR 36 (220)
Q Consensus 6 gi~~~~~~g-~~ivd~ST~~p~~~~~la~~~~ 36 (220)
.|...++.| .++||++...++.++++-+.+.
T Consensus 20 ~I~d~Lr~~~~VvvNL~~ld~~~AqRivDF~s 51 (87)
T 3p04_A 20 VIGGAFRDGDAVVFDMSLLSREEARRIVDFAA 51 (87)
T ss_dssp HHHHHHHTTCCEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEECCCCCHHHHHHHHHHhc
Confidence 355566665 5789999999999999998875
No 197
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=31.86 E-value=2.2e+02 Score=23.62 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=44.4
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHh--cCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVARE--RDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~--~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. .-+++++.++.+.+++ .|+.|++-|+.... . -.+.-.+.|..++.-...+.++++++.=
T Consensus 187 ~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 260 (366)
T 1tkk_A 187 KLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTR 260 (366)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhC
Confidence 5778875 3478999999999999 99999999985321 1 1122245666665544555667777543
No 198
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=31.75 E-value=1.3e+02 Score=26.04 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=44.7
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H---Hh-hccc-eeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I---GA-RDGK-LAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~---~a-~~g~-l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.... . .. +.-. ..|..++.-...+.++.+++.
T Consensus 231 ~l~vDan~~~~~~eai~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~ 302 (428)
T 3bjs_A 231 DILTDANTAYTMADARRVLPVLAEIQAGWLEEPFACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDA 302 (428)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHHHTTCSCEECCSCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHh
Confidence 4778875 447899999999999999999999986321 1 11 1223 566666654455667777754
No 199
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=31.27 E-value=25 Score=29.86 Aligned_cols=40 Identities=13% Similarity=0.297 Sum_probs=33.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc--EEEe
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW--AVDA 45 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~--~lda 45 (220)
..++.+++|.++||+|+..+-...++.+.+++..+. .+|.
T Consensus 248 ~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDV 289 (345)
T 4g2n_A 248 DRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDV 289 (345)
T ss_dssp HHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESC
T ss_pred HHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecC
Confidence 467789999999999999999999999999876554 4554
No 200
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=30.88 E-value=43 Score=27.23 Aligned_cols=16 Identities=19% Similarity=0.191 Sum_probs=11.0
Q ss_pred hhHHHHHHHHHHHHHh
Q 044696 159 AEYMVKDMGMGVDVVE 174 (220)
Q Consensus 159 ~~~~~KD~~~~~~~a~ 174 (220)
..+...|++.+.+..+
T Consensus 246 ~~~~~~~~~~F~~~i~ 261 (294)
T 1lc0_A 246 KNIFLKDQDIFVQKLL 261 (294)
T ss_dssp TTHHHHHHHHHHHHHT
T ss_pred CceehHhHHHHHHHHc
Confidence 3566777788877765
No 201
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=30.71 E-value=33 Score=21.32 Aligned_cols=21 Identities=10% Similarity=0.090 Sum_probs=17.8
Q ss_pred HHHHHHHcCCCHHHHHHHHhc
Q 044696 113 GLVFADEAGLDVRKWRDAVKG 133 (220)
Q Consensus 113 a~~la~~~Gl~~~~~~~~l~~ 133 (220)
.--+++++|++.+.++++|.+
T Consensus 28 I~~~a~kygV~kdeV~~~Lrr 48 (59)
T 2xvc_A 28 IEHFSKVYGVEKQEVVKLLEA 48 (59)
T ss_dssp HHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHHHHHH
Confidence 346789999999999999975
No 202
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=30.61 E-value=1.4e+02 Score=24.47 Aligned_cols=102 Identities=5% Similarity=-0.120 Sum_probs=57.0
Q ss_pred CCCCHHHHHHHHHHHHhcCCcEEEecCCC-ChHH----------hhccceeEEecCCHHhHHHHHHHHHHhcc-ceec-C
Q 044696 21 TSSHPALAREIFKVARERDCWAVDAPVSG-GDIG----------ARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFM-G 87 (220)
Q Consensus 21 ST~~p~~~~~la~~~~~~G~~~ldapV~g-~~~~----------a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~-G 87 (220)
...++++..++++.+.+.|+++|++-... .|.. ...-++..++-+.+..++++...+..-+. .+++ .
T Consensus 22 ~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 36788999999999999999999984211 1211 11223445555555555554444443444 3333 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 044696 88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~ 123 (220)
+.-..+. +--.|.-..-.+..+.+.+.++++.|+.
T Consensus 102 ~~Sd~~~-~~nl~~s~~e~l~~~~~~v~~a~~~g~~ 136 (293)
T 3ewb_X 102 ATSDVHM-EYKLKMSRAEVLASIKHHISYARQKFDV 136 (293)
T ss_dssp ECSHHHH-HHTTCCCHHHHHHHHHHHHHHHHTTCSC
T ss_pred cCcHHHH-HHHhCCCHHHHHHHHHHHHHHHHhCCCE
Confidence 2222222 2122333334556677888888887753
No 203
>3m0m_A L-rhamnose isomerase; beta/alpha barrel, HOMO-tetramer, metal-binding protein, TIM isomerase; HET: AOS; 1.45A {Pseudomonas stutzeri} PDB: 3m0l_A* 3m0h_A* 3m0v_A* 3m0x_A* 3m0y_A* 3itx_A 2hcv_A* 2i57_A* 2i56_A 3ity_A 3iud_A 3iuh_A 3iui_A 3itv_A* 3itt_A* 3itl_A* 3ito_A* 4gji_A* 4gjj_A*
Probab=30.56 E-value=1.4e+02 Score=26.22 Aligned_cols=77 Identities=12% Similarity=-0.099 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC--CChHHHHhhhhhhccccCCC-CchhhHHHHHHHHHHHHHh
Q 044696 98 ANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA--AGSMAMELYGERMIEKDFRP-GGFAEYMVKDMGMGVDVVE 174 (220)
Q Consensus 98 ~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~-~f~~~~~~KD~~~~~~~a~ 174 (220)
.|+-....+...+..+-.--.+.|+|.+.+++-|..-. ..||.+.+...+...+.|.. .-++....+|+..+...-.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~is~~~W~f~~~g~~~~~~~~~g~~r~~~e~~~d~~~v~~l~~ 93 (438)
T 3m0m_A 14 ENDRRASALKEDYEALGANLARRGVDIEAVTAKVEKFFVAVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTR 93 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCBEEGGGSSBCBCSSCBCCCSSCCCSHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhCceeeceecccCCCCccccCCCCCCCCCHHHHHHHHHHHhcccC
Confidence 34555555555555555555678999999989888654 45777776666666555543 3467778888888776654
No 204
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=30.29 E-value=61 Score=21.14 Aligned_cols=44 Identities=18% Similarity=0.231 Sum_probs=35.3
Q ss_pred CccchhhcCCCC--CEEEecCCCCHHHHHHHHHHHHhcCCcEEEec
Q 044696 3 DPDGIVSALNPG--AVYVDTTSSHPALAREIFKVARERDCWAVDAP 46 (220)
Q Consensus 3 g~~gi~~~~~~g--~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap 46 (220)
|.+.+...+++| +++|-.+..+|+....+-..+.++++.|+..+
T Consensus 15 G~~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~ 60 (82)
T 3v7e_A 15 GTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE 60 (82)
T ss_dssp SHHHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES
T ss_pred cHHHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 445556666655 57888899999999999999999999998876
No 205
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=29.96 E-value=49 Score=26.96 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=11.1
Q ss_pred HHHHHHHhcCCc-EEEecCCCCh
Q 044696 30 EIFKVARERDCW-AVDAPVSGGD 51 (220)
Q Consensus 30 ~la~~~~~~G~~-~ldapV~g~~ 51 (220)
++...+-++|.+ +++-|+.-.+
T Consensus 80 ~~~~~al~~G~~v~~eKP~~~~~ 102 (319)
T 1tlt_A 80 DVVSTLLNAGVHVCVDKPLAENL 102 (319)
T ss_dssp HHHHHHHHTTCEEEEESSSCSSH
T ss_pred HHHHHHHHcCCeEEEeCCCCCCH
Confidence 444444455654 4555665544
No 206
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=29.35 E-value=33 Score=28.72 Aligned_cols=36 Identities=8% Similarity=0.017 Sum_probs=29.5
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcE
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWA 42 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ 42 (220)
.+++.+++| ++||+|+..+-...++.+.+.+..+..
T Consensus 221 ~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~g 256 (333)
T 2d0i_A 221 ERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKG 256 (333)
T ss_dssp HHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCE
T ss_pred HHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceE
Confidence 356778899 999999999999989999888765443
No 207
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=29.24 E-value=81 Score=25.89 Aligned_cols=52 Identities=13% Similarity=0.054 Sum_probs=36.0
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 23 SHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 23 ~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+++.+.+.++...+.|+++||--..++.+++. .++ .++-++++.|+++.+.
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~------~v~-~~eE~~rv~pvi~~l~ 86 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAA------EVS-VEEELQRVIPVVEAIA 86 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCC------CCC-HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCC------cCC-HHHHHHHHHHHHHHHH
Confidence 358889999999999999999998855544332 122 2344567777776663
No 208
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=28.76 E-value=57 Score=22.19 Aligned_cols=43 Identities=7% Similarity=0.034 Sum_probs=33.6
Q ss_pred CccchhhcCC--CCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 3 DPDGIVSALN--PGAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 3 g~~gi~~~~~--~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
|.+-+...++ +-+++|-.+..+|....++...+...++.|+..
T Consensus 23 G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~ 67 (101)
T 3v7q_A 23 GEDLVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV 67 (101)
T ss_dssp SHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred chhhhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee
Confidence 4444555554 446899999999999999999999999888776
No 209
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=28.49 E-value=66 Score=26.24 Aligned_cols=11 Identities=0% Similarity=-0.003 Sum_probs=6.2
Q ss_pred hHHHHHHHHHH
Q 044696 69 VVQWLTPLFEV 79 (220)
Q Consensus 69 ~~~~~~~~l~~ 79 (220)
.+.+++.+++.
T Consensus 127 ~~~~~~~~i~~ 137 (325)
T 2ho3_A 127 AFTTIKNFLAD 137 (325)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhhh
Confidence 45556666655
No 210
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=28.40 E-value=73 Score=27.35 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=47.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++++++++.|+.|++-|+.... . -.+.-.+.+..++.-.....++++++.
T Consensus 210 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 280 (404)
T 4e5t_A 210 DLLFGTHGQFTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLET 280 (404)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHH
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHh
Confidence 5778874 457899999999999999999999986431 1 112235677777766666677788764
No 211
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=28.36 E-value=62 Score=27.87 Aligned_cols=66 Identities=15% Similarity=0.046 Sum_probs=47.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. .-+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..++.-.....++++++.=
T Consensus 180 ~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~ 251 (405)
T 3rr1_A 180 EFGLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAG 251 (405)
T ss_dssp EEEEECCSCBCHHHHHHHHHHHGGGCCSCEECSSCCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHh
Confidence 5778874 457899999999999999999999986321 11223355677776655566677887653
No 212
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=28.33 E-value=51 Score=22.39 Aligned_cols=43 Identities=5% Similarity=0.025 Sum_probs=33.6
Q ss_pred CccchhhcCCC--CCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696 3 DPDGIVSALNP--GAVYVDTTSSHPALAREIFKVARERDCWAVDA 45 (220)
Q Consensus 3 g~~gi~~~~~~--g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda 45 (220)
|.+-+...+++ -+++|-.+..+|.....+...+...++.|+..
T Consensus 22 G~~~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 66 (101)
T 3on1_A 22 GEEQVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVV 66 (101)
T ss_dssp SHHHHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 44445555544 47899999999999999999999999988764
No 213
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=28.32 E-value=1.9e+02 Score=24.35 Aligned_cols=65 Identities=15% Similarity=0.017 Sum_probs=42.7
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCC-hHH----hhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGG-DIG----ARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~-~~~----a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. .-+++++.++.+++++.|+.|++-|+... ... .+.-.+.+..+..-.....++.+++.
T Consensus 193 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 263 (377)
T 3my9_A 193 DLRLDFNQALTPFGAMKILRDVDAFRPTFIEQPVPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRR 263 (377)
T ss_dssp EEEEECTTCCCTTTHHHHHHHHHTTCCSCEECCSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHH
T ss_pred eEEEeCCCCcCHHHHHHHHHHHhhcCCCEEECCCCccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHc
Confidence 5677863 45678899999999999999999998642 111 11223456665554445556666654
No 214
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=27.99 E-value=2.5e+02 Score=23.06 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=57.1
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCc--EEEecCCCCh-HH----hhccceeEEecCCHHhHHHHHHHHHHhcc-cee
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCW--AVDAPVSGGD-IG----ARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTF 85 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~--~ldapV~g~~-~~----a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~ 85 (220)
.+.||.. ..+++++.++.+.+++.|+. |++-|+.... .. .+.-...|..++.-...+.++++++.=+- ++-
T Consensus 184 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ 263 (345)
T 2zad_A 184 KYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVN 263 (345)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEE
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEE
Confidence 4678874 44789999999999999999 9999986321 11 11223455555544445556666654322 322
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 044696 86 MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 86 ~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~ 123 (220)
+ |+ .. +-+.-..+...+|+++|+.
T Consensus 264 i---------k~----~~-GGit~~~~i~~~A~~~g~~ 287 (345)
T 2zad_A 264 I---------KL----MK-SGISDALAIVEIAESSGLK 287 (345)
T ss_dssp E---------CH----HH-HHHHHHHHHHHHHHTTTCE
T ss_pred E---------ec----cc-ccHHHHHHHHHHHHHcCCe
Confidence 2 11 11 2334445566778888876
No 215
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=27.93 E-value=96 Score=27.01 Aligned_cols=65 Identities=15% Similarity=0.143 Sum_probs=46.4
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ .-+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 242 ~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 312 (440)
T 3t6c_A 242 ELLHDAHERITPINAIHMAKALEPYQLFFLEDPVAPENTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDN 312 (440)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTGGGCCSEEECSSCGGGGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHc
Confidence 6788885 557899999999999999999999986321 1122234567766665556667777764
No 216
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=27.93 E-value=1.4e+02 Score=25.69 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=46.2
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H---Hhhcc--ceeEEecCCHHhHHHHHHHHHHhc
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I---GARDG--KLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~---~a~~g--~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+.||.. ..+++++.++.+.+.+.|+.|++-|+.... . ...+. .+.+..++.-.....++++++.=+
T Consensus 244 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 317 (441)
T 2hxt_A 244 AMAVDANQRWDVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGA 317 (441)
T ss_dssp EEEEECTTCCCHHHHHHHHHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTC
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCC
Confidence 5678874 457899999999999999999999987421 1 11111 356766665545566777776533
No 217
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=27.76 E-value=10 Score=31.72 Aligned_cols=35 Identities=34% Similarity=0.308 Sum_probs=28.5
Q ss_pred hcCCCCCEEEecCCCCHHHHHHHHHHHHhcC-CcEEE
Q 044696 9 SALNPGAVYVDTTSSHPALAREIFKVARERD-CWAVD 44 (220)
Q Consensus 9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G-~~~ld 44 (220)
+.+++|+.|++++|..|+. +++...+-.+. ..|+|
T Consensus 201 ~~l~~G~~V~~vGs~~p~~-~El~~~~~~~a~~v~vD 236 (313)
T 3hdj_A 201 QALRAGAFVGAIGSSLPHT-RELDDEALRRARAVVVE 236 (313)
T ss_dssp GGCCTTCEEEECCCSSTTC-CCCCHHHHHHCSEEEES
T ss_pred HHcCCCcEEEECCCCCCch-hhcCHHHHhcCCEEEEC
Confidence 3578999999999999985 88887776665 46899
No 218
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=27.57 E-value=93 Score=25.71 Aligned_cols=52 Identities=15% Similarity=-0.031 Sum_probs=33.9
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 23 SHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 23 ~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
.+++.+.+.+....+.|+++||--.-.+.+++. .++ .++-++++.|+++.+.
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~------~v~-~~eE~~Rv~pvi~~l~ 94 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAP------PVP-LDEELARVIPLVEALR 94 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCC------CCC-HHHHHHHHHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCC------CCC-HHHHHHHHHHHHHHHh
Confidence 367888888999999999999988744433321 122 2334566667766664
No 219
>2guk_A Hypothetical protein PG1857; alpha-beta, alpha-helical bundle, structural genomics, PSI, structure initiative; 1.91A {Porphyromonas gingivalis} SCOP: d.360.1.1
Probab=27.55 E-value=97 Score=22.11 Aligned_cols=50 Identities=8% Similarity=0.005 Sum_probs=37.5
Q ss_pred CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHH
Q 044696 21 TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLF 77 (220)
Q Consensus 21 ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l 77 (220)
=|.+.+....+-++++..|+.|+=-||-| .++..+|.| .++.++.++.+.
T Consensus 33 ~T~~~~~~~~~~~rL~~~~I~Y~iq~v~~------~~kiNlFFG-~~~Ci~vir~~~ 82 (120)
T 2guk_A 33 ATLANDDIPYAEERLRSRQIPYFAQPTPN------TERTNLFFG-CKECMEAIRLFV 82 (120)
T ss_dssp EEEEGGGHHHHHHHHHHTTCCEEEECCTT------SSEEEEEEE-CHHHHHHHHHHH
T ss_pred HhcCHhhHHHHHHHHHhCCCCEEEEEcCC------CCeEEEEeC-CHHHHHHHHHHc
Confidence 34555566667788999999999999944 467888888 677777777664
No 220
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=27.04 E-value=83 Score=27.10 Aligned_cols=65 Identities=17% Similarity=0.148 Sum_probs=47.0
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ .-+++++.++++++++.|+.|++-|+.... . -.+.-.+.|..+..-.....++++++.
T Consensus 203 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 273 (412)
T 4e4u_A 203 DLLFGTHGQMVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQA 273 (412)
T ss_dssp EEEECCCSCBCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHc
Confidence 5778874 457899999999999999999999986431 1 122335567777666566677777764
No 221
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=26.69 E-value=25 Score=28.64 Aligned_cols=41 Identities=17% Similarity=0.241 Sum_probs=26.7
Q ss_pred hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCC
Q 044696 7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGG 50 (220)
Q Consensus 7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~ 50 (220)
.++.+++|.++||++...... .+ +.+.+.|+.+++.|-..+
T Consensus 230 ~l~~mk~~~~lin~ar~~~~~--~~-~~a~~~Gv~~~~~~~l~~ 270 (293)
T 3d4o_A 230 VLAEMPSHTFVIDLASKPGGT--DF-RYAEKRGIKALLVPGLPG 270 (293)
T ss_dssp HHHHSCTTCEEEECSSTTCSB--CH-HHHHHHTCEEEECCCHHH
T ss_pred HHHhcCCCCEEEEecCCCCCC--CH-HHHHHCCCEEEECCCCCc
Confidence 456788889999998743332 22 445667888877765443
No 222
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=26.48 E-value=77 Score=27.46 Aligned_cols=65 Identities=8% Similarity=-0.050 Sum_probs=45.4
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ ..+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 224 ~L~vDaN~~~~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ 294 (422)
T 3tji_A 224 HILHDVHERLFPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVN 294 (422)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhc
Confidence 6788885 567899999999999999999999985321 1112234566666654445566777764
No 223
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=26.40 E-value=1.9e+02 Score=21.12 Aligned_cols=64 Identities=19% Similarity=0.118 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhcCCcEEEecCCC--------Ch---------HHhhccceeEEecCCHHhHHHHHHHHHH-hcc-ceec
Q 044696 26 ALAREIFKVARERDCWAVDAPVSG--------GD---------IGARDGKLAIFAAGDSAVVQWLTPLFEV-LGK-PTFM 86 (220)
Q Consensus 26 ~~~~~la~~~~~~G~~~ldapV~g--------~~---------~~a~~g~l~i~~gG~~~~~~~~~~~l~~-~~~-~~~~ 86 (220)
..-+.+.+++...|...+..|+.. +. ..+..-...++++||.+ |...-..++. +|. ++-+
T Consensus 61 ~~~~~~~~~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~D-F~plv~~lr~~~G~~V~v~ 139 (165)
T 2qip_A 61 PKQRQFHHILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIAPDVDRVILVSGDGD-FSLLVERIQQRYNKKVTVY 139 (165)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHGGGCSEEEEECCCGG-GHHHHHHHHHHHCCEEEEE
T ss_pred hhHHHHHHHHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhhccCCEEEEEECChh-HHHHHHHHHHHcCcEEEEE
Confidence 455677788899999999999742 11 11344566899999996 4444445555 799 8888
Q ss_pred CCCC
Q 044696 87 GGAG 90 (220)
Q Consensus 87 G~~G 90 (220)
|.++
T Consensus 140 g~~~ 143 (165)
T 2qip_A 140 GVPR 143 (165)
T ss_dssp ECGG
T ss_pred eCCC
Confidence 8754
No 224
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=26.25 E-value=68 Score=27.82 Aligned_cols=65 Identities=14% Similarity=0.017 Sum_probs=46.0
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ ..+++++.++++++++.|+.|++-|+.... .-.+.-.+.|..+..-.....++++++.
T Consensus 229 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 299 (425)
T 3vcn_A 229 HLLHDVHHRLTPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEE 299 (425)
T ss_dssp EEEEECTTCCCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHc
Confidence 6788986 468999999999999999999999986321 1122334567766655445566777764
No 225
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=25.98 E-value=1e+02 Score=26.13 Aligned_cols=65 Identities=17% Similarity=0.080 Sum_probs=45.5
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+.+++.|+.|++-|+.-.. . -.+.-.+.|..++.-...+.++++++.
T Consensus 201 ~l~vD~n~~~~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 271 (392)
T 2poz_A 201 ELMVDLSGGLTTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFEL 271 (392)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5778875 457999999999999999999999985321 1 112234566666655556677777754
No 226
>2ftc_I Mitochondrial ribosomal protein L16, 39S ribosomal protein L13, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_I
Probab=25.88 E-value=56 Score=23.26 Aligned_cols=34 Identities=12% Similarity=0.161 Sum_probs=26.7
Q ss_pred ccchhhcCCCCCEEEecCC-CCHHHHHHHHHHHHh
Q 044696 4 PDGIVSALNPGAVYVDTTS-SHPALAREIFKVARE 37 (220)
Q Consensus 4 ~~gi~~~~~~g~~ivd~ST-~~p~~~~~la~~~~~ 37 (220)
+++-..-.++|++++++.+ ++.+.+++.-..+..
T Consensus 77 ~~~wva~Vk~G~ilfEi~g~~~~~~a~eAlr~a~~ 111 (118)
T 2ftc_I 77 IDHYVTPVKAGRLVVEMGGRCEFEEVQGFLDQVAH 111 (118)
T ss_pred ccEEEEEECCCCEEEEEeccCCHHHHHHHHHHHHh
Confidence 3455666889999999999 888888887766653
No 227
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=25.77 E-value=1.8e+02 Score=24.52 Aligned_cols=65 Identities=17% Similarity=0.103 Sum_probs=43.3
Q ss_pred CEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCC-hH----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGG-DI----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~-~~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||. ..-+++++.++.+++++.++.|++-|+.-. .. -.+.-.+.|..+..-.....++++++.
T Consensus 196 ~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~ 266 (382)
T 3dgb_A 196 SVRVDVNQAWDEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNASSPAPIMADESIECVEDAFNLARE 266 (382)
T ss_dssp EEEEECTTCBCHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHH
T ss_pred eEEEeCCCCCCHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHc
Confidence 577887 445789999999999999999999998632 11 112223455555444445556666654
No 228
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=25.17 E-value=87 Score=26.95 Aligned_cols=65 Identities=11% Similarity=0.064 Sum_probs=46.6
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEec-CCCC-hHH----hhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAP-VSGG-DIG----ARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldap-V~g~-~~~----a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.+ .-+++++.++++++++.|+.|++-| +... ... .+.-.+.|..+..-.....++++++.
T Consensus 215 ~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~ 286 (410)
T 3dip_A 215 EIMCELHSLWGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCA 286 (410)
T ss_dssp EEEEECTTCBCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5788884 5678999999999999999999999 6532 211 12224567776665556677788765
No 229
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=25.06 E-value=2e+02 Score=23.95 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=44.9
Q ss_pred CEEEecC-CCCHHHHHHHHHHH-HhcCCcEEEecCCCChHHh----hccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAREIFKVA-RERDCWAVDAPVSGGDIGA----RDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~-~~~G~~~ldapV~g~~~~a----~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. ..+++++.++.+.+ ++.|+ |++-|+. -.... +.-.+.+..++.-...+.++.+++.=
T Consensus 192 ~l~vDan~~~~~~~a~~~~~~l~~~~~i-~iE~P~~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 261 (371)
T 2ps2_A 192 FFIVDANGKLSVETALRLLRLLPHGLDF-ALEAPCA-TWRECISLRRKTDIPIIYDELATNEMSIVKILADD 261 (371)
T ss_dssp EEEEECTTBCCHHHHHHHHHHSCTTCCC-EEECCBS-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHT
T ss_pred EEEEECCCCcCHHHHHHHHHHHHhhcCC-cCcCCcC-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhC
Confidence 5778875 45789999999999 99999 9999987 33222 22245666666555556677777653
No 230
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=24.82 E-value=80 Score=26.16 Aligned_cols=50 Identities=12% Similarity=0.136 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 24 HPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 24 ~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
+++.+.+.++...+.|+.+||---..+.+++.. ++ .++-++++.|+++.+
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~------v~-~~eE~~RvvpvI~~l 110 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAK------VS-VEEEIKRVVPMIQAV 110 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCC------CC-HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCC------CC-HHHHHHHHHHHHHHH
Confidence 367888888888899999999876554443221 11 234456666666544
No 231
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=24.75 E-value=1.2e+02 Score=21.48 Aligned_cols=33 Identities=12% Similarity=0.134 Sum_probs=22.5
Q ss_pred ceeEEecCCH----HhHHHHHHHHHHhcc--ceecCCCC
Q 044696 58 KLAIFAAGDS----AVVQWLTPLFEVLGK--PTFMGGAG 90 (220)
Q Consensus 58 ~l~i~~gG~~----~~~~~~~~~l~~~~~--~~~~G~~G 90 (220)
...+++||.. +.++...+.++.+|- +++-|...
T Consensus 85 ~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~ 123 (137)
T 1ccw_A 85 GILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPP 123 (137)
T ss_dssp TCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCH
T ss_pred CCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCH
Confidence 3678999953 457777888998886 44455543
No 232
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=24.70 E-value=15 Score=30.23 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=19.5
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCc-EEE
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCW-AVD 44 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~ld 44 (220)
++++.+++|+++. |..++ +-++++++|+. .+|
T Consensus 211 l~~~~~V~DlvY~-P~~T~-ll~~A~~~G~~~~~~ 243 (281)
T 3o8q_A 211 FSSRSVCYDMMYG-KGYTV-FNQWARQHGCAQAID 243 (281)
T ss_dssp EEEEEEEEESCCC-SSCCH-HHHHHHHTTCSEEEC
T ss_pred hCcCCEEEEecCC-CccCH-HHHHHHHCCCCEEEC
Confidence 4567777888775 44444 33566777775 444
No 233
>3bbo_O Ribosomal protein L16; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.2
Probab=24.49 E-value=58 Score=23.77 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=28.1
Q ss_pred ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHh
Q 044696 4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARE 37 (220)
Q Consensus 4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~ 37 (220)
+++-+.-..+|++++++.+++.+.+++.-..+..
T Consensus 90 ~~~wva~Vk~G~ilfEi~gv~~~~A~eAlr~a~~ 123 (135)
T 3bbo_O 90 PEYWVAVVKPGRILYEISGVAENIARRAVAIAAS 123 (135)
T ss_dssp SSCCCCCCCTTCEEEEECSSCTTHHHHHHHHHHH
T ss_pred ceEEEEEECCCCEEEEEecCCHHHHHHHHHHHHh
Confidence 4466667899999999999999999988877654
No 234
>3r8s_M 50S ribosomal protein L16; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ...
Probab=24.40 E-value=55 Score=23.94 Aligned_cols=34 Identities=32% Similarity=0.492 Sum_probs=27.7
Q ss_pred cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc
Q 044696 5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARER 38 (220)
Q Consensus 5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~ 38 (220)
++-..-..+|+++.++.+++.+.+++.-..+..+
T Consensus 90 ~~wva~Vk~G~ilfEi~g~~~~~A~eAlr~a~~K 123 (136)
T 3r8s_M 90 EYWVALIQPGKVLYEMDGVPEELAREAFKLAAAK 123 (136)
T ss_dssp EEEEEEECTTCEEEEEESSCHHHHHHHHHHHHTT
T ss_pred CEEEEEECCCCEEEEEeCCCHHHHHHHHHHHHhc
Confidence 4556667899999999999999998887777643
No 235
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=24.25 E-value=54 Score=24.86 Aligned_cols=35 Identities=6% Similarity=-0.269 Sum_probs=26.8
Q ss_pred cCCCCCEEEecCCCCHH-HHHHHHHHHHhcCCcEEE
Q 044696 10 ALNPGAVYVDTTSSHPA-LAREIFKVARERDCWAVD 44 (220)
Q Consensus 10 ~~~~g~~ivd~ST~~p~-~~~~la~~~~~~G~~~ld 44 (220)
.+.++.+++-.|+..-. ...+++..++++|+.++-
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIa 109 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSI 109 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEE
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEE
Confidence 35677777777666654 488999999999988764
No 236
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.93 E-value=1.1e+02 Score=24.85 Aligned_cols=25 Identities=16% Similarity=0.205 Sum_probs=20.3
Q ss_pred CHHHHHHHHHHHHhcCCcEEEecCC
Q 044696 24 HPALAREIFKVARERDCWAVDAPVS 48 (220)
Q Consensus 24 ~p~~~~~la~~~~~~G~~~ldapV~ 48 (220)
+++.+.+.++...+.|+++||--.-
T Consensus 32 ~~~~a~~~a~~~v~~GAdiIDIg~~ 56 (271)
T 2yci_X 32 DPRPIQEWARRQAEKGAHYLDVNTG 56 (271)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCC
Confidence 4577888888888999999998653
No 237
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=23.69 E-value=2.9e+02 Score=23.00 Aligned_cols=67 Identities=15% Similarity=0.014 Sum_probs=45.0
Q ss_pred CCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696 14 GAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEVLG 81 (220)
Q Consensus 14 g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~ 81 (220)
-.+.||.. .-++++ .++.+.+++.|+.|++-|+.... .-.+.-.+.|..+..-.....++.+++.=+
T Consensus 190 ~~l~vDan~~~~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~ 262 (375)
T 1r0m_A 190 IRLTVDANSAYTLAD-AGRLRQLDEYDLTYIEQPLAWDDLVDHAELARRIRTPLCLDESVASASDARKALALGA 262 (375)
T ss_dssp SCEEEECTTCCCGGG-HHHHHTTGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTS
T ss_pred CeEEEeCCCCCCHHH-HHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCC
Confidence 45888875 346788 99999999999999999985321 111222456666665445567777776543
No 238
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=23.64 E-value=1.8e+02 Score=24.29 Aligned_cols=96 Identities=14% Similarity=-0.042 Sum_probs=56.0
Q ss_pred CCEEEecCC-CCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHHhcc-ceec
Q 044696 14 GAVYVDTTS-SHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFM 86 (220)
Q Consensus 14 g~~ivd~ST-~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~ 86 (220)
-.+.||... -++++ .++.+.+++.|+.|++-|+.... .-.++-...+..+..-.....++.+++.=+- ++-+
T Consensus 183 ~~l~vDan~~~~~~~-~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 261 (369)
T 2zc8_A 183 ATLTADANSAYSLAN-LAQLKRLDELRLDYIEQPLAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNV 261 (369)
T ss_dssp SCEEEECTTCCCGGG-HHHHHGGGGGCCSCEECCSCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CeEEEecCCCCCHHH-HHHHHHHHhCCCcEEECCCCcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEE
Confidence 458888853 46788 88999999999999999985321 1112223455555554445566777654322 3222
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 044696 87 GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123 (220)
Q Consensus 87 G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~ 123 (220)
- + ...+-+.-..+...+|+++|+.
T Consensus 262 k---------~----~~~GGit~~~~i~~~A~~~g~~ 285 (369)
T 2zc8_A 262 K---------P----ARLGGHGESLRVHALAESAGIP 285 (369)
T ss_dssp C---------H----HHHTSHHHHHHHHHHHHHTTCC
T ss_pred c---------h----hhhCCHHHHHHHHHHHHHcCCc
Confidence 1 1 1111233344556677777877
No 239
>2l8n_A Transcriptional repressor CYTR; bacterial gene repressor, helix turn helix binding domain, L family, transcription regulation, binding protein; NMR {Escherichia coli} PDB: 2lcv_A
Probab=23.53 E-value=63 Score=20.25 Aligned_cols=28 Identities=18% Similarity=-0.053 Sum_probs=20.4
Q ss_pred HHHHHHcCCCHHHHHHHHhccCCChHHH
Q 044696 114 LVFADEAGLDVRKWRDAVKGGAAGSMAM 141 (220)
Q Consensus 114 ~~la~~~Gl~~~~~~~~l~~~~~~s~~~ 141 (220)
-.+|++.|+++.++-.+++.....++-.
T Consensus 13 ~diA~~aGVS~sTVSr~ln~~~~vs~~t 40 (67)
T 2l8n_A 13 KDVALKAKVSTATVSRALMNPDKVSQAT 40 (67)
T ss_dssp HHHHHHTTCCHHHHHHTTTCCCCSCHHH
T ss_pred HHHHHHHCCCHHHHHHHHcCCCCCCHHH
Confidence 4678899999999988887654444433
No 240
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=23.48 E-value=96 Score=26.10 Aligned_cols=65 Identities=12% Similarity=0.046 Sum_probs=44.5
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..+++++.++.+++++.|+.|++-|+.... . -.+.-...+..++.-.....++.+++.
T Consensus 187 ~l~vDan~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ 257 (367)
T 3dg3_A 187 ELYVDGNRGWSAAESLRAMREMADLDLLFAEELCPADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLG 257 (367)
T ss_dssp EEEEECTTCSCHHHHHHHHHHTTTSCCSCEESCSCTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHhCCCEEECCCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHc
Confidence 5678874 457899999999999999999999986431 1 112234566666655555566666654
No 241
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=22.92 E-value=79 Score=25.77 Aligned_cols=66 Identities=8% Similarity=0.029 Sum_probs=36.4
Q ss_pred CEEEecCCCCHHHHHHHHHHHHhcCCc-EEEecCCCChHH-------hhccceeEEecCCH---HhHHHHHHHHHH--hc
Q 044696 15 AVYVDTTSSHPALAREIFKVARERDCW-AVDAPVSGGDIG-------ARDGKLAIFAAGDS---AVVQWLTPLFEV--LG 81 (220)
Q Consensus 15 ~~ivd~ST~~p~~~~~la~~~~~~G~~-~ldapV~g~~~~-------a~~g~l~i~~gG~~---~~~~~~~~~l~~--~~ 81 (220)
.+|+.++. |..-.+++..+-++|.+ +++-|+.-.... +++..+.++++=.. ..+.+++.+++. +|
T Consensus 65 D~V~i~tp--~~~h~~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~iG 142 (323)
T 1xea_A 65 DAVMIHAA--TDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRHIPLYNQHLSELAQQECG 142 (323)
T ss_dssp SEEEECSC--GGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGCCHHHHHHCHHHHHTSCT
T ss_pred CEEEEECC--chhHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeeccccCHHHHHHHHHHhcCCcC
Confidence 44444443 33344555455556765 567787766543 33344456665432 456677777765 66
Q ss_pred c
Q 044696 82 K 82 (220)
Q Consensus 82 ~ 82 (220)
+
T Consensus 143 ~ 143 (323)
T 1xea_A 143 A 143 (323)
T ss_dssp T
T ss_pred C
Confidence 5
No 242
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=22.90 E-value=2.3e+02 Score=23.15 Aligned_cols=53 Identities=11% Similarity=0.035 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696 23 SHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK 82 (220)
Q Consensus 23 ~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~ 82 (220)
.+++.+.+-++.+.+.|+.+||--=--+.+++.. ++ .++-++|+.|+++.+.+
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~------vs-~eeE~~Rv~pvi~~l~~ 79 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEM------VT-LEEELNRVLPVVEAIVG 79 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCC------CC-HHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCC------Cc-hHHHHHHHHHHHHHhhc
Confidence 4567788888888889999999753333444321 22 34567899999999864
No 243
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=22.83 E-value=3.3e+02 Score=22.61 Aligned_cols=38 Identities=8% Similarity=0.017 Sum_probs=30.3
Q ss_pred cCCCCC-EEEecCC-------CCHHHHHHHHHHHHhcCCcEEEecC
Q 044696 10 ALNPGA-VYVDTTS-------SHPALAREIFKVARERDCWAVDAPV 47 (220)
Q Consensus 10 ~~~~g~-~ivd~ST-------~~p~~~~~la~~~~~~G~~~ldapV 47 (220)
...++. +.|-+|. .++++..++++.+.+.|+.||+...
T Consensus 215 avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 215 VVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 344454 7777775 4789999999999999999999875
No 244
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=22.77 E-value=3e+02 Score=22.92 Aligned_cols=67 Identities=7% Similarity=-0.139 Sum_probs=44.8
Q ss_pred CCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCCh-----HHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 14 GAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGD-----IGARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 14 g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~-----~~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
-.+.||. ..-+++++.++.+++.+.++.|++-|+.... .-.+.-...|..+=.-.....++++++.=
T Consensus 189 ~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 261 (378)
T 4hpn_A 189 MRLMIDANHGYTVTEAITLGDRAAGFGIDWFEEPVVPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAG 261 (378)
T ss_dssp SEEEEECTTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTT
T ss_pred EEEEEecCcccCHHHHHHHHhhhhhcccchhhcCCCccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcC
Confidence 3577887 4468999999999999999999999996432 12233344554433333455667777643
No 245
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=22.56 E-value=60 Score=27.22 Aligned_cols=39 Identities=15% Similarity=0.087 Sum_probs=27.9
Q ss_pred chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec
Q 044696 6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP 46 (220)
Q Consensus 6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap 46 (220)
.+.+.+..-.+||++ ..|.....+++.+.+.|++|+|.-
T Consensus 70 ~l~~~~~~~DvVi~~--~p~~~~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 70 KLVEVMKEFELVIGA--LPGFLGFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp HHHHHHTTCSEEEEC--CCGGGHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHhCCCEEEEe--cCCcccchHHHHHHhcCcceEeee
Confidence 344445566777765 466667788899999999999953
No 246
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=22.51 E-value=90 Score=20.50 Aligned_cols=31 Identities=16% Similarity=0.033 Sum_probs=17.2
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVD 44 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld 44 (220)
..-.++|+++ .+.....+.+.+.+.|+.++|
T Consensus 68 ~~~d~vi~~~--~~~~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 68 GGFDAVISAA--PFFLTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp TTCSEEEECS--CGGGHHHHHHHHHHTTCEEEC
T ss_pred cCCCEEEECC--CchhhHHHHHHHHHhCCCEEE
Confidence 3345556555 334445666666666666665
No 247
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=22.47 E-value=32 Score=28.00 Aligned_cols=29 Identities=21% Similarity=0.268 Sum_probs=16.6
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCc
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCW 41 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~ 41 (220)
++++.+++|+... |..+. +-++++++|+.
T Consensus 205 l~~~~~V~DlvY~-P~~T~-ll~~A~~~G~~ 233 (272)
T 3pwz_A 205 LGEAALAYELAYG-KGLTP-FLRLAREQGQA 233 (272)
T ss_dssp GTTCSEEEESSCS-CCSCH-HHHHHHHHSCC
T ss_pred hCcCCEEEEeecC-CCCCH-HHHHHHHCCCC
Confidence 4566677777665 43333 44556666664
No 248
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=22.22 E-value=3.5e+02 Score=22.82 Aligned_cols=40 Identities=18% Similarity=0.134 Sum_probs=31.8
Q ss_pred cCCCCCEEEec-CCCCHHHHHHHHHHH--HhcCCcEEEecCCC
Q 044696 10 ALNPGAVYVDT-TSSHPALAREIFKVA--RERDCWAVDAPVSG 49 (220)
Q Consensus 10 ~~~~g~~ivd~-ST~~p~~~~~la~~~--~~~G~~~ldapV~g 49 (220)
....-.+.||. ..-+++++.++.+++ .+.++.|++-|+..
T Consensus 185 ~~~~~~L~vDaN~~w~~~~A~~~~~~L~~~~~~i~~iEeP~~~ 227 (389)
T 3s5s_A 185 AAPGASLILDGNGGLTAGEALALVAHARRLGADVALLEQPVPR 227 (389)
T ss_dssp HCTTCEEEEECTTCSCHHHHHHHHHHHHHTTCEEEEEECCSCT
T ss_pred hCCCCeEEEECCCCCCHHHHHHHHHHHhhCCCCeEEEECCCCc
Confidence 34344788998 456789999999999 77789999999964
No 249
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=22.06 E-value=1.2e+02 Score=24.41 Aligned_cols=31 Identities=19% Similarity=0.162 Sum_probs=26.3
Q ss_pred CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE
Q 044696 12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVD 44 (220)
Q Consensus 12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld 44 (220)
..-.++||+| .|+...+..+.+.++|+++|-
T Consensus 71 ~~~DvVIDft--~p~~~~~~~~~a~~~G~~vVi 101 (273)
T 1dih_A 71 DDFDVFIDFT--RPEGTLNHLAFCRQHGKGMVI 101 (273)
T ss_dssp TSCSEEEECS--CHHHHHHHHHHHHHTTCEEEE
T ss_pred cCCCEEEEcC--ChHHHHHHHHHHHhCCCCEEE
Confidence 3458999999 599999999999999998654
No 250
>1rxw_A Flap structure-specific endonuclease; helical clamp, helix-3 turn-helix, hydrophobic wedge, 3' FLA site, hydrolase-DNA complex; 2.00A {Archaeoglobus fulgidus} SCOP: a.60.7.1 c.120.1.2 PDB: 1rxv_A
Probab=21.76 E-value=1e+02 Score=25.76 Aligned_cols=51 Identities=16% Similarity=0.089 Sum_probs=38.3
Q ss_pred cCCCCHHHHHHHHHHHHhcCCcEEEecCCCC---hHHhhccceeEEecCCHHhH
Q 044696 20 TTSSHPALAREIFKVARERDCWAVDAPVSGG---DIGARDGKLAIFAAGDSAVV 70 (220)
Q Consensus 20 ~ST~~p~~~~~la~~~~~~G~~~ldapV~g~---~~~a~~g~l~i~~gG~~~~~ 70 (220)
.+.++|.....+.+.++..|+.|+.+|=-+= ...+..|....++++|.+.+
T Consensus 123 ~~~vt~~~~~~~~~lL~~~gi~~i~apgeAEA~lA~la~~g~~~~I~S~D~Dll 176 (336)
T 1rxw_A 123 AGRVDEYIVDSAKTLLSYMGIPFVDAPSEGEAQAAYMAAKGDVEYTGSQDYDSL 176 (336)
T ss_dssp HCCCCHHHHHHHHHHHHHTTCCEEECSSCHHHHHHHHHHTTSSSEEECSSSHHH
T ss_pred hccCCHHHHHHHHHHHHhCCCCEEEcCchHHHHHHHHHHcCCeeEEEcCCCCcc
Confidence 3567888889999999999999999995311 12335676678899998865
No 251
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=21.72 E-value=43 Score=26.93 Aligned_cols=31 Identities=13% Similarity=0.176 Sum_probs=21.8
Q ss_pred CCCCCEEEecCCCCHHHHHHHHHHHHhcCCc-EE
Q 044696 11 LNPGAVYVDTTSSHPALAREIFKVARERDCW-AV 43 (220)
Q Consensus 11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~-~l 43 (220)
++++.+++|+++. |..+. +.++++++|+. .+
T Consensus 204 l~~~~~v~D~~y~-p~~t~-~~~~a~~~G~~~~~ 235 (271)
T 1nyt_A 204 IHPGIYCYDMFYQ-KGKTP-FLAWCEQRGSKRNA 235 (271)
T ss_dssp CCTTCEEEESCCC-SSCCH-HHHHHHHTTCCEEE
T ss_pred cCCCCEEEEeccC-CcCCH-HHHHHHHcCCCeec
Confidence 4678899999886 44443 55677888876 44
No 252
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=21.63 E-value=28 Score=28.07 Aligned_cols=10 Identities=20% Similarity=0.391 Sum_probs=4.9
Q ss_pred CCCEEEecCC
Q 044696 13 PGAVYVDTTS 22 (220)
Q Consensus 13 ~g~~ivd~ST 22 (220)
++.+++|+++
T Consensus 206 ~~~~v~D~~y 215 (272)
T 1p77_A 206 LGSAFYDMQY 215 (272)
T ss_dssp HCSCEEESCC
T ss_pred CCCEEEEeeC
Confidence 3445555555
No 253
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=21.57 E-value=2.8e+02 Score=22.99 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=50.5
Q ss_pred ceeEEecC---CHHhHHHHHHHHHHhcc-ce-ecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 044696 58 KLAIFAAG---DSAVVQWLTPLFEVLGK-PT-FMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAV 131 (220)
Q Consensus 58 ~l~i~~gG---~~~~~~~~~~~l~~~~~-~~-~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l 131 (220)
.|+=++.| ++++++++..+.+.+++ .+ .+.+ +|. +.|=+ ....+.|++.+.+.-+.+++++=.++
T Consensus 154 ~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGF------i~NRl---~~~~~~EA~~lv~eGvas~edID~~~ 224 (319)
T 3ado_A 154 PLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGF------VLNRL---QYAIISEAWRLVEEGIVSPSDLDLVM 224 (319)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTT------THHHH---HHHHHHHHHHHHHTTSSCHHHHHHHH
T ss_pred chHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCCE------eHHHH---HHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 35545665 45788999999999998 65 4466 773 23332 34577899999999999999988887
Q ss_pred hccC
Q 044696 132 KGGA 135 (220)
Q Consensus 132 ~~~~ 135 (220)
..+.
T Consensus 225 ~~g~ 228 (319)
T 3ado_A 225 SDGL 228 (319)
T ss_dssp HTTH
T ss_pred HhCC
Confidence 7654
No 254
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=21.24 E-value=2.4e+02 Score=23.41 Aligned_cols=64 Identities=11% Similarity=0.039 Sum_probs=43.0
Q ss_pred CEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCCh-H----HhhccceeEEecCCHHhHHHHHHHHHH
Q 044696 15 AVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGD-I----GARDGKLAIFAAGDSAVVQWLTPLFEV 79 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~-~----~a~~g~l~i~~gG~~~~~~~~~~~l~~ 79 (220)
.+.||.. ..++++ .++.+.+++.|+.|++-|+.... . -.+.-...+..++.-...+.++.+++.
T Consensus 185 ~l~vDan~~~~~~~-~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~ 254 (368)
T 1sjd_A 185 LLQVDANTAYTLGD-APQLARLDPFGLLLIEQPLEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKL 254 (368)
T ss_dssp EEEEECTTCCCGGG-HHHHHTTGGGCCSEEECCSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHT
T ss_pred eEEEeccCCCCHHH-HHHHHHHHhcCCCeEeCCCChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHc
Confidence 4677875 346788 99999999999999999986421 1 112224566666554455667777764
No 255
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=21.10 E-value=1.7e+02 Score=24.43 Aligned_cols=66 Identities=12% Similarity=0.125 Sum_probs=44.0
Q ss_pred CEEEecC-CCCHHHHH-HHHHHHHhcCCcEEEecCCCChH-----HhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696 15 AVYVDTT-SSHPALAR-EIFKVARERDCWAVDAPVSGGDI-----GARDGKLAIFAAGDSAVVQWLTPLFEVL 80 (220)
Q Consensus 15 ~~ivd~S-T~~p~~~~-~la~~~~~~G~~~ldapV~g~~~-----~a~~g~l~i~~gG~~~~~~~~~~~l~~~ 80 (220)
.+.||.. ..+++++. ++.+.+++.|+.|++-|+..... -.+.-.+.+..++.-...+.++.+++.=
T Consensus 187 ~l~vDan~~~~~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~ 259 (369)
T 2p8b_A 187 AIRVDVNQGWKNSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLE 259 (369)
T ss_dssp EEEEECTTTTBSHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHT
T ss_pred eEEEECCCCCCHHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhC
Confidence 4678874 34688999 99999999999999999853211 1122345666666544556667777643
No 256
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=20.51 E-value=1.1e+02 Score=20.14 Aligned_cols=35 Identities=11% Similarity=0.117 Sum_probs=28.6
Q ss_pred CCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCC
Q 044696 14 GAVYVDTTSSHPALAREIFKVARERDCWAVDAPVS 48 (220)
Q Consensus 14 g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~ 48 (220)
|...+-..+.+++...++.+++.++|+.++..|..
T Consensus 71 g~~hi~~~v~d~~~v~~~~~~l~~~G~~~~~~~~~ 105 (127)
T 3e5d_A 71 GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM 105 (127)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ceEEEEEEcCCHHHHHHHHHHHHHcCCeEecCccc
Confidence 34567777778888999999999999999887753
No 257
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=20.47 E-value=1.9e+02 Score=23.62 Aligned_cols=58 Identities=10% Similarity=0.034 Sum_probs=39.0
Q ss_pred EEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHH
Q 044696 16 VYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLF 77 (220)
Q Consensus 16 ~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l 77 (220)
+.|-.....+ ++++.++++++|+.+.-.+-. ....+.-.+.+.+|||...+..++.+.
T Consensus 32 i~iv~~~~~~--~~~l~~~L~~~g~~v~~~~~~--~~~~~~~DlvIvlGGDGT~L~aa~~~~ 89 (278)
T 1z0s_A 32 AAVVYKTDGH--VKRIEEALKRLEVEVELFNQP--SEELENFDFIVSVGGDGTILRILQKLK 89 (278)
T ss_dssp EEEEESSSTT--HHHHHHHHHHTTCEEEEESSC--CGGGGGSSEEEEEECHHHHHHHHTTCS
T ss_pred EEEEeCCcHH--HHHHHHHHHHCCCEEEEcccc--ccccCCCCEEEEECCCHHHHHHHHHhC
Confidence 4444444444 889999999999987543321 122346689999999998776665543
Done!