Query 044705
Match_columns 209
No_of_seqs 120 out of 810
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 05:58:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044705.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044705hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02314 pectinesterase 100.0 1E-33 2.2E-38 260.8 20.2 162 31-201 69-237 (586)
2 PLN02468 putative pectinestera 100.0 1.1E-33 2.4E-38 259.4 19.5 158 31-201 63-220 (565)
3 PLN02990 Probable pectinestera 100.0 1.3E-33 2.9E-38 259.0 19.3 160 31-200 52-212 (572)
4 PLN02484 probable pectinestera 100.0 1.6E-33 3.4E-38 259.2 18.9 157 31-199 72-228 (587)
5 PLN02313 Pectinesterase/pectin 100.0 2.8E-33 6E-38 257.8 20.4 163 31-199 58-221 (587)
6 PLN02217 probable pectinestera 100.0 2E-33 4.3E-38 260.1 19.4 160 30-200 51-210 (670)
7 TIGR01614 PME_inhib pectineste 100.0 2.1E-32 4.5E-37 218.4 19.1 154 27-197 24-177 (178)
8 PLN02506 putative pectinestera 100.0 8.3E-33 1.8E-37 251.9 18.8 168 24-199 26-193 (537)
9 PLN02708 Probable pectinestera 100.0 1.9E-32 4.2E-37 250.8 19.4 154 30-198 42-196 (553)
10 PLN02197 pectinesterase 100.0 1.9E-32 4.2E-37 251.3 19.4 156 30-200 36-193 (588)
11 PLN02713 Probable pectinestera 100.0 1.3E-32 2.8E-37 252.2 17.6 152 34-196 34-188 (566)
12 smart00856 PMEI Plant invertas 100.0 3.6E-32 7.8E-37 210.4 17.1 147 30-193 2-148 (148)
13 PLN02995 Probable pectinestera 100.0 3.5E-32 7.7E-37 248.2 18.8 157 32-200 34-193 (539)
14 PLN02745 Putative pectinestera 100.0 1.1E-31 2.3E-36 247.3 20.0 162 26-201 73-235 (596)
15 PLN02416 probable pectinestera 100.0 1.3E-31 2.8E-36 244.6 18.8 162 25-199 31-193 (541)
16 PLN02301 pectinesterase/pectin 100.0 2.2E-31 4.8E-36 242.9 18.0 159 26-200 44-203 (548)
17 PLN03043 Probable pectinestera 100.0 2.1E-30 4.7E-35 236.6 16.2 150 36-196 3-156 (538)
18 PLN02698 Probable pectinestera 100.0 3.8E-30 8.1E-35 233.2 17.4 157 27-199 17-178 (497)
19 PF04043 PMEI: Plant invertase 100.0 2.5E-29 5.4E-34 194.8 14.9 148 30-193 2-152 (152)
20 PLN02933 Probable pectinestera 99.9 6.4E-26 1.4E-30 205.8 17.7 127 61-199 48-183 (530)
21 PLN02201 probable pectinestera 99.9 1.2E-24 2.7E-29 197.5 16.3 164 1-198 1-164 (520)
22 PLN02488 probable pectinestera 99.9 3.5E-23 7.5E-28 186.3 14.4 150 36-198 2-160 (509)
23 PLN02170 probable pectinestera 99.9 4.9E-23 1.1E-27 186.7 12.3 131 43-202 58-189 (529)
24 PLN02916 pectinesterase family 99.7 5.2E-18 1.1E-22 153.4 9.4 88 96-201 57-144 (502)
25 PF08287 DASH_Spc19: Spc19; I 51.9 40 0.00088 26.2 5.2 71 104-193 2-79 (153)
26 PF02953 zf-Tim10_DDP: Tim10/D 47.1 44 0.00095 21.7 4.1 29 95-123 36-64 (66)
27 PF07870 DUF1657: Protein of u 45.7 73 0.0016 19.8 6.7 44 74-119 4-47 (50)
28 PF03487 IL13: Interleukin-13; 44.0 26 0.00056 21.0 2.2 19 148-168 3-21 (43)
29 PF11172 DUF2959: Protein of u 34.2 2.6E+02 0.0056 22.9 7.4 86 38-127 6-92 (201)
30 PF10360 DUF2433: Protein of u 33.6 38 0.00082 25.8 2.4 33 172-204 35-70 (132)
31 KOG1733 Mitochondrial import i 28.3 2.2E+02 0.0048 20.2 8.3 28 96-123 58-85 (97)
32 KOG4514 Uncharacterized conser 24.0 3.9E+02 0.0085 21.6 7.8 59 61-124 121-179 (222)
33 COG2205 KdpD Osmosensitive K+ 20.7 6.8E+02 0.015 25.2 8.7 99 97-195 620-723 (890)
No 1
>PLN02314 pectinesterase
Probab=100.00 E-value=1e-33 Score=260.84 Aligned_cols=162 Identities=23% Similarity=0.409 Sum_probs=142.3
Q ss_pred hHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHH
Q 044705 31 ARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQ 110 (209)
Q Consensus 31 ~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el 110 (209)
+...|+.+|++|+||++|+++|.++|. +...+|++|++++++++++++..+...++.+ ... ..+++++.||+||+|+
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~-s~~~~p~~L~~~al~vti~~a~~a~~~~~~L-~~~-~~~~~~k~AL~DC~El 145 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPT-SNTTDPETLFKLSLKVAIDELSKLSDLPQKL-INE-TNDERLKSALRVCETL 145 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhc-cCCHHHHHHHHHHHHH
Confidence 567999999999999999999999997 6778999999999999999999999999988 442 5789999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCc--chhchhhHHHHHHHhhcCcchHhhcCCCCC-----chhhHHHHHHHHHHH
Q 044705 111 IDSGIGQLGQSIKEIRRLGNARNAVTDD--SFTRIDNVETWVSSALTDASDCVAQFPVRN-----MSKLKATIKGKVLNV 183 (209)
Q Consensus 111 ~~~a~d~L~~a~~~l~~~~~~~~~~~~~--~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~-----~~~~~~~i~~~~~~~ 183 (209)
|++++|+|++++.+|+.. +... ..+.++|++||||||||||+||+|||++.+ .+++++.|...+.++
T Consensus 146 lddAid~L~~Sl~~l~~~------~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~ 219 (586)
T PLN02314 146 FDDAIDRLNDSISSMQVG------EGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNS 219 (586)
T ss_pred HHHHHHHHHHHHHHHhhc------ccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHH
Confidence 999999999999999754 1111 245789999999999999999999998653 246899999999999
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 044705 184 AQVTSNALALFHRYAARY 201 (209)
Q Consensus 184 ~~l~snaLaiv~~~~~~~ 201 (209)
.+|+||+|||++.+...+
T Consensus 220 ~eLtSNaLAIi~~l~~~~ 237 (586)
T PLN02314 220 TEFTSNSLAIVSKILGIL 237 (586)
T ss_pred HHHHHHHHHHHhhhcccc
Confidence 999999999999977644
No 2
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-33 Score=259.41 Aligned_cols=158 Identities=22% Similarity=0.339 Sum_probs=137.9
Q ss_pred hHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHH
Q 044705 31 ARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQ 110 (209)
Q Consensus 31 ~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el 110 (209)
.+..|+.+|++|+||++|+++|.++|. +...+|++|++++++++++++.++...+..++......+++++.||+||+|+
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~-s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k~AL~DC~EL 141 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPK-ASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTNAALNACQEL 141 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHHHHHHHHHHH
Confidence 456999999999999999999999997 6678999999999999999999998888777322224588999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 044705 111 IDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSNA 190 (209)
Q Consensus 111 ~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~sna 190 (209)
|++++|+|++++.++... .. .+..+|++||||||||||+||+|||++.+ +++.|...+.++.+|+||+
T Consensus 142 lddaid~L~~Sl~~l~~~--------~~-~~~~dDl~TWLSAAlTnq~TClDGF~e~~---vk~~~~~~l~n~~eLtSNa 209 (565)
T PLN02468 142 LDLAIDNLNNSLTSSGGV--------SV-LDNVDDLRTWLSSAGTYQETCIDGLAEPN---LKSFGENHLKNSTELTSNS 209 (565)
T ss_pred HHHHHHHHHHHHHHHhcc--------cc-ccchHHHHHHHHHHhcchhhhhhhhcccC---chHHHHHHHHHHHHHHHHH
Confidence 999999999999999743 11 34679999999999999999999998743 7889999999999999999
Q ss_pred HHHHHHhhhhh
Q 044705 191 LALFHRYAARY 201 (209)
Q Consensus 191 Laiv~~~~~~~ 201 (209)
|||++.++...
T Consensus 210 LAIi~~l~~~~ 220 (565)
T PLN02468 210 LAIITWIGKIA 220 (565)
T ss_pred HHHhhcccccc
Confidence 99999876543
No 3
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.3e-33 Score=259.04 Aligned_cols=160 Identities=17% Similarity=0.296 Sum_probs=138.9
Q ss_pred hHHHHHhhcCCCCChhchHHHhcc-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHH
Q 044705 31 ARAYIEESCRSTRYPTLCVHCLSG-FARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQ 109 (209)
Q Consensus 31 ~~~~v~~~C~~T~yp~~C~~tL~~-~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~e 109 (209)
.+..|+.+|++|+||++|+++|.+ .|. ..+|++|++++++++++++.++...+..++......+++++.|++||+|
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~---~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k~Al~DC~E 128 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD---STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETKGALELCEK 128 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHH
Confidence 456999999999999999999998 433 4789999999999999999999988877743323578999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHH
Q 044705 110 QIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSN 189 (209)
Q Consensus 110 l~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~sn 189 (209)
+|++++|+|++++.+|+.. +...+.+..+|++||||||||||+||+|||++.+ +++++.|...+.++.+|+||
T Consensus 129 LlddAvdeL~~Sl~~l~~~------~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~-s~lk~~~~~~l~nv~~LtSN 201 (572)
T PLN02990 129 LMNDATDDLKKCLDNFDGF------SIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIK-SNLSQDMLKIFKTSRELTSN 201 (572)
T ss_pred HHHHHHHHHHHHHHHHhhc------ccccccchhHHHHHHHHHHhccHhhHHHhhhccc-hhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999854 2233445679999999999999999999998754 57999999999999999999
Q ss_pred HHHHHHHhhhh
Q 044705 190 ALALFHRYAAR 200 (209)
Q Consensus 190 aLaiv~~~~~~ 200 (209)
+|||+++++..
T Consensus 202 ALAiv~~~~~~ 212 (572)
T PLN02990 202 GLAMITNISNL 212 (572)
T ss_pred HHHHHhhhhcc
Confidence 99999997764
No 4
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.6e-33 Score=259.18 Aligned_cols=157 Identities=21% Similarity=0.395 Sum_probs=138.2
Q ss_pred hHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHH
Q 044705 31 ARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQ 110 (209)
Q Consensus 31 ~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el 110 (209)
++..|+.+|++|+||++|+++|.++|. +...+|++|++++++++++++.++......+ .. ...+++++.||+||+|+
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~-s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l-~~-~~~~~r~k~AL~DClEL 148 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPG-SLTASESDLIHISFNMTLQHFSKALYLSSTI-SY-VQMPPRVRSAYDSCLEL 148 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHhh-hh-ccCCHHHHHHHHHHHHH
Confidence 456999999999999999999999987 6678999999999999999999887665554 44 45789999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 044705 111 IDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSNA 190 (209)
Q Consensus 111 ~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~sna 190 (209)
|++++|+|++++.+|... . . .+..+|++||||||||||+||+|||++.+.+++++.|...+.++.+|+||+
T Consensus 149 lddAid~L~~Sl~~l~~~------~--~-~~~~~DvkTWLSAALTnq~TClDGF~e~~~~~vk~~m~~~l~~l~~LtSNA 219 (587)
T PLN02484 149 LDDSVDALSRALSSVVPS------S--G-GGSPQDVVTWLSAALTNHDTCTEGFDGVNGGEVKDQMTGALKDLSELVSNC 219 (587)
T ss_pred HHHHHHHHHHHHHHHhcc------c--c-ccchHHHHhHHHHHhccHhhHHHHhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999853 1 1 346799999999999999999999987642468999999999999999999
Q ss_pred HHHHHHhhh
Q 044705 191 LALFHRYAA 199 (209)
Q Consensus 191 Laiv~~~~~ 199 (209)
|||++.+..
T Consensus 220 LAIi~~~~~ 228 (587)
T PLN02484 220 LAIFSASNG 228 (587)
T ss_pred HHHhhcccc
Confidence 999999775
No 5
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.8e-33 Score=257.81 Aligned_cols=163 Identities=21% Similarity=0.405 Sum_probs=140.7
Q ss_pred hHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHH
Q 044705 31 ARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQ 110 (209)
Q Consensus 31 ~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el 110 (209)
.+..|+.+|+.|+||++|+++|+++|. +...+|++|++++|+++++++..+...++.++...+..+++++.||+||+|+
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~-~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k~AL~DClEL 136 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGG-KELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREVTALHDCLET 136 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCC-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHH
Confidence 456999999999999999999999887 5667999999999999999999999999988432225688999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCc-hhhHHHHHHHHHHHHHHHHH
Q 044705 111 IDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNM-SKLKATIKGKVLNVAQVTSN 189 (209)
Q Consensus 111 ~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~-~~~~~~i~~~~~~~~~l~sn 189 (209)
|++++|+|++++.+|.... +...+.+..+|++||||||||||+||+|||++.+. +++++.|...+.++.+|+||
T Consensus 137 lddavD~L~~Sl~~l~~~~-----~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSN 211 (587)
T PLN02313 137 IDETLDELHVAVEDLHQYP-----KQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSN 211 (587)
T ss_pred HHHHHHHHHHHHHHHhhcc-----cccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999998531 11223446899999999999999999999986542 36899999999999999999
Q ss_pred HHHHHHHhhh
Q 044705 190 ALALFHRYAA 199 (209)
Q Consensus 190 aLaiv~~~~~ 199 (209)
+|||++.+..
T Consensus 212 ALAIv~~~~~ 221 (587)
T PLN02313 212 ALAMIKNMTE 221 (587)
T ss_pred HHHHHhcccc
Confidence 9999998775
No 6
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2e-33 Score=260.10 Aligned_cols=160 Identities=20% Similarity=0.349 Sum_probs=139.0
Q ss_pred hhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHH
Q 044705 30 RARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQ 109 (209)
Q Consensus 30 ~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~e 109 (209)
++.++|+.+|+.|+||++|+++|.+++. ...+|++|++++|+++++++.++...+..+ ... ..+++++.|++||+|
T Consensus 51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~~--~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L-~~~-~~~~r~k~AL~DClE 126 (670)
T PLN02217 51 TSVKAIKDVCAPTDYKETCEDTLRKDAK--NTSDPLELVKTAFNATMKQISDVAKKSQTM-IEL-QKDPRTKMALDQCKE 126 (670)
T ss_pred hHHHHHHHHhcCCCCcHHHHHHhhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh-cCChHHHHHHHHHHH
Confidence 4456999999999999999999999873 356999999999999999999999888887 442 458899999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHH
Q 044705 110 QIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSN 189 (209)
Q Consensus 110 l~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~sn 189 (209)
+|++++|+|++++.+|... +...+.+..+|++||||||||||+||+|||++.+ +.+++.|...+.++.+|+||
T Consensus 127 LlddAvDeL~~Sl~~L~~~------~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~-~~vk~~m~~~l~nvseLtSN 199 (670)
T PLN02217 127 LMDYAIGELSKSFEELGKF------EFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQ-GNAGETIKKALKTAVQLTHN 199 (670)
T ss_pred HHHHHHHHHHHHHHHHhhc------cccccccchhHHHHHHHHHHhchhHHHHhhhhhc-hHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999843 1222344679999999999999999999998654 57899999999999999999
Q ss_pred HHHHHHHhhhh
Q 044705 190 ALALFHRYAAR 200 (209)
Q Consensus 190 aLaiv~~~~~~ 200 (209)
+|||++++...
T Consensus 200 ALAmv~~lss~ 210 (670)
T PLN02217 200 GLAMVSEMSNY 210 (670)
T ss_pred HHHHHhhcccc
Confidence 99999987653
No 7
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=2.1e-32 Score=218.39 Aligned_cols=154 Identities=23% Similarity=0.402 Sum_probs=139.6
Q ss_pred cChhhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHH
Q 044705 27 RHSRARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVED 106 (209)
Q Consensus 27 ~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~d 106 (209)
+...+.+.|+.+|++|+||++|+++|.++|. +...+|.+|+.++++.+..++..+.+++.++ .+. ..++..+.+++|
T Consensus 24 ~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~-~~~ad~~~la~~ai~~a~~~~~~~~~~i~~l-~~~-~~~~~~~~al~~ 100 (178)
T TIGR01614 24 SLNATQSLIKRICKKTEYPNFCISTLKSDPS-SAKADLQGLANISVSAALSNASDTLDHISKL-LLT-KGDPRDKSALED 100 (178)
T ss_pred CCcchHHHHHHHHcCCCChHHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hcc-CCCHHHHHHHHH
Confidence 5556778999999999999999999999998 6677999999999999999999999999998 543 337899999999
Q ss_pred HHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHH
Q 044705 107 CKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQV 186 (209)
Q Consensus 107 C~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l 186 (209)
|.++|++++++|++++.+++.+ +++|+++|||+|+++++||.|||.+.+ +..++.|...++++.+|
T Consensus 101 C~~~y~~a~~~L~~a~~~l~~~-------------~~~d~~~~ls~a~~~~~tC~d~f~~~~-~~~~~~l~~~~~~~~~l 166 (178)
T TIGR01614 101 CVELYSDAVDALDKALASLKSK-------------DYSDAETWLSSALTDPSTCEDGFEELG-GIVKSPLTKRNNNVKKL 166 (178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-------------chhHHHHHHHHHHcccchHHHHhccCC-CCccchHHHHHHHHHHH
Confidence 9999999999999999999865 688999999999999999999999875 35678899999999999
Q ss_pred HHHHHHHHHHh
Q 044705 187 TSNALALFHRY 197 (209)
Q Consensus 187 ~snaLaiv~~~ 197 (209)
++|+|+|++.+
T Consensus 167 ~s~alai~~~~ 177 (178)
T TIGR01614 167 SSITLAIIKML 177 (178)
T ss_pred HHHHHHHHHhc
Confidence 99999999865
No 8
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=8.3e-33 Score=251.95 Aligned_cols=168 Identities=26% Similarity=0.448 Sum_probs=142.4
Q ss_pred CcccChhhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHH
Q 044705 24 SFARHSRARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQT 103 (209)
Q Consensus 24 ~~~~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~a 103 (209)
+......+..+|+.+|+.|+||++|+++|+++...+...+|++|++++|+++++++.++...+..+ ... ..+++++.|
T Consensus 26 ~~~~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l-~~~-~~~~r~~~A 103 (537)
T PLN02506 26 SPYQELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKF-NAL-SISYREQVA 103 (537)
T ss_pred CchhhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc-cCChHHHHH
Confidence 345566778899999999999999999999864413457899999999999999999999999988 443 468899999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHH
Q 044705 104 VEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNV 183 (209)
Q Consensus 104 L~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~ 183 (209)
++||+|+|++++++|++++.+++.... ........+|++|||||||||++||+|||++.+ +++++.|+..+.++
T Consensus 104 l~DC~EllddSvd~L~~Sl~el~~~~~-----~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~-~~~k~~v~~~l~nv 177 (537)
T PLN02506 104 IEDCKELLDFSVSELAWSLLEMNKIRA-----GHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTD-RHLENFIKGSLKQV 177 (537)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccc-----ccccccchhhHHhHHHHHhccHhHHHHhhhhcc-hhHHHHHHHHHHHH
Confidence 999999999999999999999975311 011122468999999999999999999998765 57899999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 044705 184 AQVTSNALALFHRYAA 199 (209)
Q Consensus 184 ~~l~snaLaiv~~~~~ 199 (209)
.+|+||+|||++++..
T Consensus 178 ~~LtSNALAiv~~l~~ 193 (537)
T PLN02506 178 TQLISNVLAMYTQLHS 193 (537)
T ss_pred HHHHHHHHHHHhhccc
Confidence 9999999999998765
No 9
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.9e-32 Score=250.77 Aligned_cols=154 Identities=23% Similarity=0.358 Sum_probs=130.6
Q ss_pred hhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHH
Q 044705 30 RARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQ 109 (209)
Q Consensus 30 ~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~e 109 (209)
.+..+|+.+|+.|+||++|+++|++++..+...+|.+|++++|+++++++.++...++.+ ......+.....|++||+|
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L-~~~~~~~~~~~~AL~DC~E 120 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSI-LDSSAGNVNRTTAATNCLE 120 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCCchHHHHHHHHHH
Confidence 567899999999999999999999988412456899999999999999999999999988 4422223333589999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCc-hhhHHHHHHHHHHHHHHHH
Q 044705 110 QIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNM-SKLKATIKGKVLNVAQVTS 188 (209)
Q Consensus 110 l~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~-~~~~~~i~~~~~~~~~l~s 188 (209)
+|++++|+|++++.++... ..+|++||||||||||+||+|||.+.+. +.+++.| ..++++.+|+|
T Consensus 121 Llddavd~L~~Sl~~L~~~-------------~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtS 186 (553)
T PLN02708 121 VLSNSEHRISSTDIALPRG-------------KIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTS 186 (553)
T ss_pred HHHHHHHHHHHHHHHhhhc-------------chHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHH
Confidence 9999999999999888743 6799999999999999999999986642 3566666 68999999999
Q ss_pred HHHHHHHHhh
Q 044705 189 NALALFHRYA 198 (209)
Q Consensus 189 naLaiv~~~~ 198 (209)
|+|||++.+.
T Consensus 187 NSLAmv~~~~ 196 (553)
T PLN02708 187 NALSMMASYD 196 (553)
T ss_pred HHHHhhhccc
Confidence 9999999854
No 10
>PLN02197 pectinesterase
Probab=100.00 E-value=1.9e-32 Score=251.32 Aligned_cols=156 Identities=18% Similarity=0.320 Sum_probs=134.5
Q ss_pred hhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhccCChhHhHHHHHH
Q 044705 30 RARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAK--QLKAINATEYQTVEDC 107 (209)
Q Consensus 30 ~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~--~~~~~~~~~~~aL~dC 107 (209)
+..+.|+.+|+.|+||++|+++|++++. .+|++|++++|+++++++.++...+..+ . .....+++++.|++||
T Consensus 36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~s----~~p~~L~~aaL~vtl~~~~~a~~~~s~l-~~~~~~~~~~r~k~Al~DC 110 (588)
T PLN02197 36 PQMKAVQGICQSTSDKASCVKTLEPVKS----DDPNKLIKAFMLATKDAITKSSNFTGQT-EGNMGSSISPNNKAVLDYC 110 (588)
T ss_pred hhHHHHHHhcCCCCChHHHHHHHhhccC----CCHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhcccCCHHHHHHHHHH
Confidence 4455999999999999999999999874 5899999999999999999999888866 3 1224589999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHH
Q 044705 108 KQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVT 187 (209)
Q Consensus 108 ~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~ 187 (209)
.|+|++++|+|++++.+|+.. ...+.+..+|++||||||||||+||+|||.+. .+++.|...+.++.+|+
T Consensus 111 ~eLl~davd~L~~Sl~~l~~~-------~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~---~~k~~v~~~l~nv~~Lt 180 (588)
T PLN02197 111 KRVFMYALEDLSTIVEEMGED-------LNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED---DLRKTIGEGIANSKILT 180 (588)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-------ccccccchhhHHHHHHHHHhChhhhhccccCc---chHHHHHHHHHHHHHHH
Confidence 999999999999999999831 11223457899999999999999999999864 37888999999999999
Q ss_pred HHHHHHHHHhhhh
Q 044705 188 SNALALFHRYAAR 200 (209)
Q Consensus 188 snaLaiv~~~~~~ 200 (209)
||+|||++.++..
T Consensus 181 SNaLAiv~~ls~~ 193 (588)
T PLN02197 181 SNAIDIFHSVVSA 193 (588)
T ss_pred HHHHHHhhccchh
Confidence 9999999987653
No 11
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.3e-32 Score=252.24 Aligned_cols=152 Identities=18% Similarity=0.257 Sum_probs=131.3
Q ss_pred HHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-c-CChhHhHHHHHHHHHH
Q 044705 34 YIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLK-A-INATEYQTVEDCKQQI 111 (209)
Q Consensus 34 ~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~-~-~~~~~~~aL~dC~el~ 111 (209)
.++.+|+.|+||++|+++|.+.. ..+|+++++++|+++++++..+...+..+ .+.. . .+++++.||+||+|+|
T Consensus 34 ~~~s~C~~T~YP~~C~ssLs~s~----~~d~~~l~~aaL~~tl~~a~~a~~~vs~L-~~~~~~~~~~r~k~AL~DC~ELl 108 (566)
T PLN02713 34 SPSTICNTTPDPSFCKSVLPHNQ----PGNVYDYGRFSVRKSLSQSRKFLSLVDRY-LKRNSTLLSKSAIRALEDCQFLA 108 (566)
T ss_pred CCccccCCCCChHHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccCCHHHHHHHHHHHHHH
Confidence 45678999999999999997632 46899999999999999999999999988 4433 2 3889999999999999
Q ss_pred HhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCc-hhhHHHHHHHHHHHHHHHHHH
Q 044705 112 DSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNM-SKLKATIKGKVLNVAQVTSNA 190 (209)
Q Consensus 112 ~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~-~~~~~~i~~~~~~~~~l~sna 190 (209)
++++|+|++++.+|+.. +...+.+..+|++||||||||||+||+|||.+.+. .++++.|...+.++.+|+||+
T Consensus 109 ddavD~L~~Sl~~l~~~------~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~~k~~v~~~l~nvt~LtSNa 182 (566)
T PLN02713 109 GLNIDFLLSSFETVNSS------SKTLSDPQADDVQTLLSAILTNQQTCLDGLQAASSAWSVRNGLAVPLSNDTKLYSVS 182 (566)
T ss_pred HHHHHHHHHHHHHHhhc------cccccccchhhHHHHHHHhhcchhhhhhhhhccccchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999854 11223567899999999999999999999987642 367888999999999999999
Q ss_pred HHHHHH
Q 044705 191 LALFHR 196 (209)
Q Consensus 191 Laiv~~ 196 (209)
|||++.
T Consensus 183 LAlv~~ 188 (566)
T PLN02713 183 LALFTK 188 (566)
T ss_pred HHHhcc
Confidence 999987
No 12
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=100.00 E-value=3.6e-32 Score=210.41 Aligned_cols=147 Identities=30% Similarity=0.559 Sum_probs=135.3
Q ss_pred hhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHH
Q 044705 30 RARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQ 109 (209)
Q Consensus 30 ~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~e 109 (209)
+..+.|+.+|++|+||++|+++|.++|. +...|+.+|++++++.++.++..+..++..+ .+ +..+++.+.+|+||.+
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~-~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l-~~-~~~~~~~~~al~~C~~ 78 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPS-SSATDPKDLAKIAIKVALSQATKTLSFISSL-LK-KTKDPRLKAALKDCLE 78 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-cCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999998 7788999999999999999999999999998 44 3568999999999999
Q ss_pred HHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHH
Q 044705 110 QIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSN 189 (209)
Q Consensus 110 l~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~sn 189 (209)
+|++++++|++++.+++.+ +++|+++|||+|++|++||+|||.+.+ +++++.|...+.++.+|++|
T Consensus 79 ~y~~a~~~L~~a~~~l~~~-------------~~~d~~~~lsaa~t~~~tC~d~f~~~~-~~~~~~l~~~~~~~~~l~s~ 144 (148)
T smart00856 79 LYDDAVDSLEKALEELKSG-------------DYDDVATWLSAALTDQDTCLDGFEEND-DKVKSPLTKRNDNLEKLTSN 144 (148)
T ss_pred HHHHHHHHHHHHHHHHHhc-------------chhHHHHHHHHHhcCcchHHhHhccCC-cchhHHHHHHHHHHHHHHHH
Confidence 9999999999999999865 688999999999999999999998754 46788999999999999999
Q ss_pred HHHH
Q 044705 190 ALAL 193 (209)
Q Consensus 190 aLai 193 (209)
+|+|
T Consensus 145 aLai 148 (148)
T smart00856 145 ALAI 148 (148)
T ss_pred HHhC
Confidence 9986
No 13
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.5e-32 Score=248.17 Aligned_cols=157 Identities=18% Similarity=0.250 Sum_probs=130.5
Q ss_pred HHHHHhhcCCCCChhchHHHhccccCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHH
Q 044705 32 RAYIEESCRSTRYPTLCVHCLSGFARKTSL-HSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQ 110 (209)
Q Consensus 32 ~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~-~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el 110 (209)
..+|+.+|+.|+||++|+++|.++|. +.. .++.+++++++++++.++.++...+..+ .+ ...+++++.|++||.|+
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~-s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l-~~-~~~~~r~~~AL~DC~EL 110 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNG-FRQPTQISEFRVMLVEAAMDRAISARDELTNS-GK-NCTDFKKQAVLADCIDL 110 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccc-cccccCccHHHHHHHHHHHHHHHHHHHHHHHH-hh-ccCCHHHHHHHHHHHHH
Confidence 34999999999999999999999887 433 4899999999999999999999999888 44 24688999999999999
Q ss_pred HHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHH--HHHHHHHH
Q 044705 111 IDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKV--LNVAQVTS 188 (209)
Q Consensus 111 ~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~--~~~~~l~s 188 (209)
|++++|+|++++.+|+... .....+..+|++||||||||||+||+|||++.+ ++..+...+ .++.+|+|
T Consensus 111 l~DAvD~L~~Sl~~l~~~~------~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~---~~~~v~~~v~~~~~~~ltS 181 (539)
T PLN02995 111 YGDTIMQLNRTLQGVSPKA------GAAKRCTDFDAQTWLSTALTNTETCRRGSSDLN---VSDFITPIVSNTKISHLIS 181 (539)
T ss_pred HHHHHHHHHHHHHHHhhcc------ccccccchhhHHHHHHHHhcchhhhhhhhcccc---chhhhhhhhhhhhHHHHHH
Confidence 9999999999999998541 111123457999999999999999999998754 334444455 67999999
Q ss_pred HHHHHHHHhhhh
Q 044705 189 NALALFHRYAAR 200 (209)
Q Consensus 189 naLaiv~~~~~~ 200 (209)
|+|||++.+...
T Consensus 182 NaLAi~~~l~~~ 193 (539)
T PLN02995 182 NCLAVNGALLTA 193 (539)
T ss_pred HHHHHhhhhccc
Confidence 999999987653
No 14
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-31 Score=247.26 Aligned_cols=162 Identities=22% Similarity=0.365 Sum_probs=139.1
Q ss_pred ccChhhHHHHHhhcCCCCChhchHHHhccccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHH
Q 044705 26 ARHSRARAYIEESCRSTRYPTLCVHCLSGFAR-KTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTV 104 (209)
Q Consensus 26 ~~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~-~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL 104 (209)
.+.....++|+.+|+.|+||++|+++|.++.. .+...+|++|++++|+++++++..+...+..+ . ..+++++.|+
T Consensus 73 ~~~~~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l-~---~~~~r~k~Al 148 (596)
T PLN02745 73 SPVSQVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSF-K---FENPDEKDAI 148 (596)
T ss_pred CCCchHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhh-c---cCCHHHHHHH
Confidence 34456678999999999999999999998653 12357899999999999999999998888776 3 3589999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHH
Q 044705 105 EDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVA 184 (209)
Q Consensus 105 ~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~ 184 (209)
+||+|+|++++|+|++++.+|... ...+.+.++|++||||||||||+||+|||++. ++++.|...+.++.
T Consensus 149 ~DC~ELlddAid~L~~Sl~~l~~~-------~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~---~l~s~m~~~l~~~~ 218 (596)
T PLN02745 149 EDCKLLVEDAKEELKASISRINDE-------VNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG---KLKSEMEKTFKSSQ 218 (596)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-------ccccccchHHHHHHHHHHhccHhHHHhhhccc---chHHHHHHHHHHHH
Confidence 999999999999999999999741 12345678999999999999999999999874 48899999999999
Q ss_pred HHHHHHHHHHHHhhhhh
Q 044705 185 QVTSNALALFHRYAARY 201 (209)
Q Consensus 185 ~l~snaLaiv~~~~~~~ 201 (209)
+|+||+|||++.++..+
T Consensus 219 eLtSNALAiv~~lss~~ 235 (596)
T PLN02745 219 ELTSNSLAMVSSLTSFL 235 (596)
T ss_pred HHHHHHHHHHhhhhhhh
Confidence 99999999999877633
No 15
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.3e-31 Score=244.55 Aligned_cols=162 Identities=18% Similarity=0.260 Sum_probs=137.0
Q ss_pred cccChhhHHHHHhhcCCCCChhchHHHhccccCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHH
Q 044705 25 FARHSRARAYIEESCRSTRYPTLCVHCLSGFARKTS-LHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQT 103 (209)
Q Consensus 25 ~~~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~-~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~a 103 (209)
.+...++.++|+.+|+.|+||++|+++|.+++. .. ..++.++++++|+.++..+..+...++.+ ......+++++.|
T Consensus 31 ~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~-~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~-~~~~~~~~~~k~A 108 (541)
T PLN02416 31 TTSLDPHLSSLTSFCKSTPYPDACFDSLKLSIS-INISPNILNFLLQTLQTAISEAGKLTNLLSGA-GQSSNIIEKQRGT 108 (541)
T ss_pred ccCCchHHHHHHHhcCCCCChHHHHHHHhhccc-ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccCCCHHHHHH
Confidence 344445667999999999999999999999875 32 45788999999999999988888777665 4433457899999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHH
Q 044705 104 VEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNV 183 (209)
Q Consensus 104 L~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~ 183 (209)
|+||.|+|++++|+|++++.+|+.. + .+..+|++||||||||||+||+|||++.+ +.+++.|...+.++
T Consensus 109 L~DC~El~~dAvD~L~~Sl~~L~~~------~----~~~~~DvqTWLSAALT~q~TC~DGF~~~~-~~~~~~i~~~~~~v 177 (541)
T PLN02416 109 IQDCKELHQITVSSLKRSVSRIQAG------D----SRKLADARAYLSAALTNKNTCLEGLDSAS-GPLKPKLVNSFTST 177 (541)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc------c----ccchhhHHHHHHHHhcchhhHHhhhhhcC-cchhhHHHHHHHHH
Confidence 9999999999999999999999753 1 13679999999999999999999998764 56788999999999
Q ss_pred HHHHHHHHHHHHHhhh
Q 044705 184 AQVTSNALALFHRYAA 199 (209)
Q Consensus 184 ~~l~snaLaiv~~~~~ 199 (209)
.+|+||+|||++.+..
T Consensus 178 ~qltSNALAlv~~~~~ 193 (541)
T PLN02416 178 YKHVSNSLSMLPKSRR 193 (541)
T ss_pred HHHHHHHHHHhccccc
Confidence 9999999999998764
No 16
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=2.2e-31 Score=242.90 Aligned_cols=159 Identities=15% Similarity=0.252 Sum_probs=136.6
Q ss_pred ccChhhHHHHHhhcCCCCChhchHHHhccccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHH
Q 044705 26 ARHSRARAYIEESCRSTRYPTLCVHCLSGFARK-TSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTV 104 (209)
Q Consensus 26 ~~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~-s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL 104 (209)
+......++|+.+|+.|+||++|+++|.+++.. ....+|.+|++++|+++++++..+...+..+ .. ...+++++.||
T Consensus 44 ~~~~~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l-~~-~~~~~~~~aAL 121 (548)
T PLN02301 44 TNSSSPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEI-RI-RINDPRDKAAL 121 (548)
T ss_pred cCCCCchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-ccCChHHHHHH
Confidence 334556689999999999999999999998751 1345899999999999999999999999988 44 35789999999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHH
Q 044705 105 EDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVA 184 (209)
Q Consensus 105 ~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~ 184 (209)
+||+|+|++++|+|++++++|+.. . .+..+|++||||||||||+||+|||.+. .++.|...+.++.
T Consensus 122 ~DC~ELl~davd~L~~Sl~~l~~~------~----~~~~~Dv~TWLSAALT~q~TC~DGF~~~----~~~~~~~~l~n~~ 187 (548)
T PLN02301 122 ADCVELMDLSKDRIKDSVEALGNV------T----SKSHADAHTWLSSVLTNHVTCLDGINGP----SRQSMKPGLKDLI 187 (548)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc------c----ccchHHHHHHHHHHhcchhhHHhhhhhh----hhhhHHHHHHHHH
Confidence 999999999999999999999854 1 1246899999999999999999999865 3567888999999
Q ss_pred HHHHHHHHHHHHhhhh
Q 044705 185 QVTSNALALFHRYAAR 200 (209)
Q Consensus 185 ~l~snaLaiv~~~~~~ 200 (209)
+|+||+|||++.+...
T Consensus 188 qL~SNsLAiv~~l~~~ 203 (548)
T PLN02301 188 SRARTSLAILVSVSPA 203 (548)
T ss_pred HHHHHHHHhhcccccc
Confidence 9999999999987643
No 17
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.97 E-value=2.1e-30 Score=236.65 Aligned_cols=150 Identities=19% Similarity=0.288 Sum_probs=130.1
Q ss_pred HhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----hccCChhHhHHHHHHHHHH
Q 044705 36 EESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQ----LKAINATEYQTVEDCKQQI 111 (209)
Q Consensus 36 ~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~----~~~~~~~~~~aL~dC~el~ 111 (209)
..+|+.|+||++|+++|.+++. + ..+|.++++++|++++.++..+...+..+ .. .+..+++++.||+||+|+|
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~-~-~~~p~~l~~aaL~vtl~~a~~a~~~vs~l-~~~~~~~~~~~~r~~~AL~DC~ELl 79 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKS-S-PSDPYEYGKFSVKQCLKQARRLSKVINYY-LTHENQPGKMTHEEIGALADCGELS 79 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccC-C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccccCCHHHHHHHHHHHHHH
Confidence 3579999999999999998876 4 35999999999999999999999999887 42 1236789999999999999
Q ss_pred HhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHHHHHHH
Q 044705 112 DSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQVTSNAL 191 (209)
Q Consensus 112 ~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l~snaL 191 (209)
++++|+|++++.+|... .. ...+..+|++||||||||||+||+|||.+.+ +++++.|...+.++.+|+||+|
T Consensus 80 ddSvD~L~~Sl~~L~~~------~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~-~~~k~~i~~~l~nvt~LtSNaL 151 (538)
T PLN03043 80 ELNVDYLETISSELKSA------EL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSK-SSFAAALGAPLGNLTRLYSVSL 151 (538)
T ss_pred HHHHHHHHHHHHHHhcc------cc-ccccchhhHHHhHHHhhcChhhhhchhhccc-hhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999854 10 1234578999999999999999999998765 5788999999999999999999
Q ss_pred HHHHH
Q 044705 192 ALFHR 196 (209)
Q Consensus 192 aiv~~ 196 (209)
||++.
T Consensus 152 Alv~~ 156 (538)
T PLN03043 152 GLVSH 156 (538)
T ss_pred HHHhh
Confidence 99996
No 18
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=3.8e-30 Score=233.15 Aligned_cols=157 Identities=18% Similarity=0.328 Sum_probs=136.4
Q ss_pred cChhhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--ChhHhHHH
Q 044705 27 RHSRARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAI--NATEYQTV 104 (209)
Q Consensus 27 ~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~--~~~~~~aL 104 (209)
-+.+...+|+.+|+.|+||++|+++|++.+. +|++|++++|++++.++..+...+..+ ...... +++++.++
T Consensus 17 ~~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~-----~p~~Li~aal~vtl~~~~~a~~~~~~l-~~~~~~~~~~r~~~Al 90 (497)
T PLN02698 17 MPFAYQNEVQRECSFTKYPSLCVQTLRGLRH-----DGVDIVSVLVNKTISETNLPLSSSMGS-SYQLSLEEATYTPSVS 90 (497)
T ss_pred CchhHHHHHHHhccCCCChHHHHHHHhccCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhcccCcChHHHHHH
Confidence 4567888999999999999999999999752 799999999999999999999999887 443333 37888999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCC---chhhHHHHHHHHH
Q 044705 105 EDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRN---MSKLKATIKGKVL 181 (209)
Q Consensus 105 ~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~---~~~~~~~i~~~~~ 181 (209)
+||.|+|++++++|++++.+|.... .+..+|++||||||||||+||+|||.+.. .+++++.|.+.+.
T Consensus 91 ~DC~Ell~dsvd~L~~Sl~~l~~~~----------~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~ 160 (497)
T PLN02698 91 DSCERLMKMSLKRLRQSLLALKGSS----------RKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMD 160 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc----------ccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHH
Confidence 9999999999999999999998641 13678999999999999999999995421 1368899999999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 044705 182 NVAQVTSNALALFHRYAA 199 (209)
Q Consensus 182 ~~~~l~snaLaiv~~~~~ 199 (209)
++.+|+||+|||++.+..
T Consensus 161 ~~~~ltSNALAmv~~l~~ 178 (497)
T PLN02698 161 HLSRLVSNSLALVNRITP 178 (497)
T ss_pred HHHHHHHHHHHHHhhhhc
Confidence 999999999999999876
No 19
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.97 E-value=2.5e-29 Score=194.85 Aligned_cols=148 Identities=29% Similarity=0.526 Sum_probs=126.5
Q ss_pred hhHHHHHhhcCCCCChh-chHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHH
Q 044705 30 RARAYIEESCRSTRYPT-LCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCK 108 (209)
Q Consensus 30 ~~~~~v~~~C~~T~yp~-~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~ 108 (209)
++.+.|+.+|++|+||. +|+++|.+++. +...+|.+|++++|++++.++..+..++.++ .+....++..+.+|++|.
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~-~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l-~~~~~~~~~~~~~l~~C~ 79 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPS-SSAADPKELARIAVQAALSNATSASAFISKL-LKNPSKDPNAKQALQDCQ 79 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCC-GCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC-S-THHHHHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCCHHhhHHHHHHH
Confidence 35789999999999888 99999999976 6788999999999999999999999999988 443356899999999999
Q ss_pred HHHHhHHHHHHHHHHHH--HhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHH
Q 044705 109 QQIDSGIGQLGQSIKEI--RRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQV 186 (209)
Q Consensus 109 el~~~a~d~L~~a~~~l--~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l 186 (209)
++|++++++|++++.++ ..+ +++++++|||+|++|++||+|||.+.. .+.++.|.....++.+|
T Consensus 80 ~~y~~a~~~l~~a~~~l~~~~~-------------~~~~~~~~lsaa~~~~~tC~~~f~~~~-~~~~~~l~~~~~~~~~l 145 (152)
T PF04043_consen 80 ELYDDAVDSLQRALEALNSKNG-------------DYDDARTWLSAALTNQDTCEDGFEEAG-SPVKSPLVQRNDNVEKL 145 (152)
T ss_dssp HHHHHHHHHHHHHHHHH--HHT--------------HHHHHHHHHHHHHHHHHHHHHC-TTS-SS--HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcccc-------------hhHHHHHHHHHHHHHHHHHHHHhcccC-CCccchHHHHHHHHHHH
Confidence 99999999999999999 654 788999999999999999999995322 35788899999999999
Q ss_pred HHHHHHH
Q 044705 187 TSNALAL 193 (209)
Q Consensus 187 ~snaLai 193 (209)
++|+|+|
T Consensus 146 ~s~aLai 152 (152)
T PF04043_consen 146 SSNALAI 152 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 9999997
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.94 E-value=6.4e-26 Score=205.85 Aligned_cols=127 Identities=20% Similarity=0.381 Sum_probs=111.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCChhHhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCc
Q 044705 61 LHSPEELAQLALSISLYKARVTKAYLVKVAKQLK--AINATEYQTVEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDD 138 (209)
Q Consensus 61 ~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~--~~~~~~~~aL~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~ 138 (209)
..+|++|++++|+++++++.++...+..+ .... ..+++++.|++||+|+|++++|+|++++.+|+..
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L-~~~~~~~l~~r~~~Al~DC~El~~davd~L~~S~~~l~~~---------- 116 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDL-QTRLGPNLTHRERCAFEDCLGLLDDTISDLTTAISKLRSS---------- 116 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------
Confidence 47899999999999999999999999988 4422 4688999999999999999999999999999853
Q ss_pred chhchhhHHHHHHHhhcCcchHhhcCCCCC-------chhhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044705 139 SFTRIDNVETWVSSALTDASDCVAQFPVRN-------MSKLKATIKGKVLNVAQVTSNALALFHRYAA 199 (209)
Q Consensus 139 ~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~-------~~~~~~~i~~~~~~~~~l~snaLaiv~~~~~ 199 (209)
...++|++||||||||||+||+|||.+.+ .+++++.|...+.++.+|+||+|||+++++.
T Consensus 117 -~~~~~Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 117 -SPEFNDVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred -ccchhHHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 12478999999999999999999998654 1268899999999999999999999998775
No 21
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.92 E-value=1.2e-24 Score=197.52 Aligned_cols=164 Identities=18% Similarity=0.301 Sum_probs=126.3
Q ss_pred CchhhHHHHHHHHHHhhhcccCCCcccChhhHHHHHhhcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHH
Q 044705 1 MAQLSAFLLIIFSFSCLTATVEPSFARHSRARAYIEESCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKAR 80 (209)
Q Consensus 1 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~ 80 (209)
|..|+++|+++.++.++. +.... ...+..+..|.. .+..+++++|+++++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~---------------------~~~~~~~~~L~~tl~~a~ 53 (520)
T PLN02201 1 MSTLIFFLILLTLSLCVS-SKEAF-----SSTDLLQMECLK---------------------VPPSEFVSSLKTTVDVIR 53 (520)
T ss_pred CchHHHHHHHHHhccccc-ccccc-----ccccchhhhhhh---------------------ccHHHHHHHHHHHHHHHH
Confidence 567888888888877777 33210 112233333332 245788889999999999
Q ss_pred HHHHHHHHHHHhhccCChhHhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchH
Q 044705 81 VTKAYLVKVAKQLKAINATEYQTVEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDC 160 (209)
Q Consensus 81 ~a~~~~~~ll~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC 160 (209)
++...+..+ .+. ..+++++.|++||+|++++++|+|++++.+|+...+. ........+|++||||||||||+||
T Consensus 54 ~a~~~vs~l-~~~-~~~~r~~~Al~DC~ELl~davD~L~~Sl~eL~~~~~~----~~~~~~~~~DvqTWLSAALTnq~TC 127 (520)
T PLN02201 54 KVVSIVSQF-DKV-FGDSRLSNAISDCLDLLDFAAEELSWSISASQNPNGK----DNSTGDVGSDLRTWLSAALSNQDTC 127 (520)
T ss_pred HHHHHHHHH-hhc-cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc----ccccccchhHHHHHHHhhhcchhhh
Confidence 999999988 542 3588999999999999999999999999999854110 0001335799999999999999999
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044705 161 VAQFPVRNMSKLKATIKGKVLNVAQVTSNALALFHRYA 198 (209)
Q Consensus 161 ~Dgf~~~~~~~~~~~i~~~~~~~~~l~snaLaiv~~~~ 198 (209)
+|||++.+ +.++..|...+.++.+|+||+|||++...
T Consensus 128 lDGF~~~~-~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 128 IEGFDGTN-GIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred hhhhhccc-cchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99998764 56788899999999999999999998744
No 22
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.90 E-value=3.5e-23 Score=186.25 Aligned_cols=150 Identities=17% Similarity=0.254 Sum_probs=126.0
Q ss_pred HhhcCCCCChhchHHHhcccc----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-ChhHhHHHHHH---
Q 044705 36 EESCRSTRYPTLCVHCLSGFA----RKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAI-NATEYQTVEDC--- 107 (209)
Q Consensus 36 ~~~C~~T~yp~~C~~tL~~~~----~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~-~~~~~~aL~dC--- 107 (209)
...|..++||+.|...|.... . ....++.+++.++++.++.++..+...+..+ ... .. +++++.|++||
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~-~~~-~~~~~~~~~a~~dc~~~ 78 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSS-LSEMRCRDLLIIVLKNSVWRIDMAMIGVMED-TKL-LEEMENDMLGVKEDTNL 78 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccc-cccCcchHHHHHHHHHHHHHHHHHHHHHHHH-HHH-hhhchhhhhhHHHhHHH
Confidence 357999999999999987765 2 2344699999999999999999999999888 543 33 89999999999
Q ss_pred -HHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHHHHHHHHHHHHH
Q 044705 108 -KQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKATIKGKVLNVAQV 186 (209)
Q Consensus 108 -~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~i~~~~~~~~~l 186 (209)
+|+|++++|+|++++..+.... ... ....+|++||||||||||+||+|||.+ ++++..|...+.++.+|
T Consensus 79 c~el~~~~~~~l~~s~~~~~~~~------~~~-~~~~~d~~twLSa~lt~q~TC~dg~~~---~~~~~~~~~~l~~~~~~ 148 (509)
T PLN02488 79 FEEMMESAKDRMIRSVEELLGGE------SPN-LGSYENVHTWLSGVLTSYITCIDEIGE---GAYKRRVEPELEDLISR 148 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhhccc------ccc-cCcHHHHHHHHHHhHhchhhHhccccC---cchHHHHHHHHHHHHHH
Confidence 9999999999999999996320 011 124589999999999999999999953 35888899999999999
Q ss_pred HHHHHHHHHHhh
Q 044705 187 TSNALALFHRYA 198 (209)
Q Consensus 187 ~snaLaiv~~~~ 198 (209)
+||+|||+..+.
T Consensus 149 ~sn~La~~~~~~ 160 (509)
T PLN02488 149 ARVALAIFISIS 160 (509)
T ss_pred HHHHHHhhcccc
Confidence 999999998765
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=4.9e-23 Score=186.68 Aligned_cols=131 Identities=18% Similarity=0.261 Sum_probs=102.2
Q ss_pred CChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHHHHhHHHHHHHHH
Q 044705 43 RYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQIDSGIGQLGQSI 122 (209)
Q Consensus 43 ~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~ 122 (209)
+||..|..+|++... +-|..++..+++..+... + .. . .....+|++||+|+|++++|+|++++
T Consensus 58 ~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~~~~~---------~-~~--~-~~~~~~Al~DC~ELlddavd~L~~S~ 120 (529)
T PLN02170 58 PSSSSKQGFLSSVQE----SMNHALFARSLAFNLTLS---------H-RT--V-QTHTFDPVNDCLELLDDTLDMLSRIV 120 (529)
T ss_pred CCcchhhhhhhhhhc----cChHHHHHhhhHhhhhhh---------h-hh--c-ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999987633 347778888887776621 1 11 1 12225799999999999999999999
Q ss_pred HHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044705 123 KEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNM-SKLKATIKGKVLNVAQVTSNALALFHRYAARY 201 (209)
Q Consensus 123 ~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~-~~~~~~i~~~~~~~~~l~snaLaiv~~~~~~~ 201 (209)
+.... .+..+|++||||||||||+||+|||++.+. .+++..|...+.++.+|+||+|||++.+....
T Consensus 121 ~~~~~------------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~ 188 (529)
T PLN02170 121 VIKHA------------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKH 188 (529)
T ss_pred Hhhcc------------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 54331 247899999999999999999999987653 25667788889999999999999999876544
Q ss_pred c
Q 044705 202 G 202 (209)
Q Consensus 202 ~ 202 (209)
.
T Consensus 189 ~ 189 (529)
T PLN02170 189 S 189 (529)
T ss_pred c
Confidence 3
No 24
>PLN02916 pectinesterase family protein
Probab=99.74 E-value=5.2e-18 Score=153.44 Aligned_cols=88 Identities=20% Similarity=0.365 Sum_probs=73.3
Q ss_pred CChhHhHHHHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCchhhHHH
Q 044705 96 INATEYQTVEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNMSKLKAT 175 (209)
Q Consensus 96 ~~~~~~~aL~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~~~~~~ 175 (209)
.+-....|++||+|+|++++|+|++++..+... ..+|++||||||||||+||+|||++.. ..+
T Consensus 57 ~~~~~~~Al~DC~ELl~dSvd~L~~Sl~~~~~~-------------~~~DvqTWLSAALTnq~TClDGf~~~~--~~~-- 119 (502)
T PLN02916 57 SYYNLGEALSDCEKLYDESEARLSKLLVSHENF-------------TVEDARTWLSGVLANHHTCLDGLEQKG--QGH-- 119 (502)
T ss_pred CcccHhHHHHHHHHHHHHHHHHHHHHHHhhccC-------------chHHHHHHHHHHHhCHhHHHHhhhhcc--ccc--
Confidence 355677899999999999999999999876532 479999999999999999999998653 122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044705 176 IKGKVLNVAQVTSNALALFHRYAARY 201 (209)
Q Consensus 176 i~~~~~~~~~l~snaLaiv~~~~~~~ 201 (209)
...+.++.+|+||+|||++.+...+
T Consensus 120 -~~~v~nvt~ltSNaLAlv~~~~~~~ 144 (502)
T PLN02916 120 -KPMAHNVTFVLSEALALYKKSRGHM 144 (502)
T ss_pred -hHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 2346799999999999999887643
No 25
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=51.86 E-value=40 Score=26.22 Aligned_cols=71 Identities=13% Similarity=0.245 Sum_probs=43.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhcccCCCCCCcchhchhhHHHHHHHhhcCcchHhhcCCCCCc-------hhhHHHH
Q 044705 104 VEDCKQQIDSGIGQLGQSIKEIRRLGNARNAVTDDSFTRIDNVETWVSSALTDASDCVAQFPVRNM-------SKLKATI 176 (209)
Q Consensus 104 L~dC~el~~~a~d~L~~a~~~l~~~~~~~~~~~~~~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~-------~~~~~~i 176 (209)
|++|..-+..++..|+.++.-|..+. .++..+.+.|..- --|+=.+. ..+.+.|
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~~~-----------~D~pRL~kvL~t~--------R~FeLvpe~dl~~Aq~~l~~EI 62 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDSGT-----------SDFPRLTKVLQTT--------RHFELVPEPDLQAAQQSLRDEI 62 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-----------cccHHHHHHHccc--------CcccccCHHHHHHHHHHHHHhc
Confidence 56788888888888888888887652 2555666666432 22222211 1355667
Q ss_pred HHHHHHHHHHHHHHHHH
Q 044705 177 KGKVLNVAQVTSNALAL 193 (209)
Q Consensus 177 ~~~~~~~~~l~snaLai 193 (209)
.+.+..+...+.+.|.=
T Consensus 63 ~P~I~~Ll~k~e~~l~k 79 (153)
T PF08287_consen 63 EPQINHLLDKAEKHLEK 79 (153)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 77777777777776654
No 26
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=47.12 E-value=44 Score=21.68 Aligned_cols=29 Identities=7% Similarity=0.247 Sum_probs=23.3
Q ss_pred cCChhHhHHHHHHHHHHHhHHHHHHHHHH
Q 044705 95 AINATEYQTVEDCKQQIDSGIGQLGQSIK 123 (209)
Q Consensus 95 ~~~~~~~~aL~dC~el~~~a~d~L~~a~~ 123 (209)
.++..+..+++.|.+-|-++...+.+.+.
T Consensus 36 ~L~~~E~~Ci~~C~~ky~~~~~~v~~~~~ 64 (66)
T PF02953_consen 36 SLSSKEESCIDNCVDKYIDTNQFVSKRFQ 64 (66)
T ss_dssp S--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999888877654
No 27
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=45.70 E-value=73 Score=19.83 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHHHHhHHHHHH
Q 044705 74 ISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQIDSGIGQLG 119 (209)
Q Consensus 74 ~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el~~~a~d~L~ 119 (209)
.++..+..+....+.+ .- ...|+..+..+..|.+.++..+.+|+
T Consensus 4 q~lAslK~~qA~Le~f-al-~T~d~~AK~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 4 QTLASLKKAQADLETF-AL-QTQDQEAKQMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHhhHHHH-Hh-hcCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 3444444555544555 22 13488888899999998888888775
No 28
>PF03487 IL13: Interleukin-13; InterPro: IPR020470 Interleukin-13 (IL-13) is a pleiotropic cytokine which may be important in the regulation of the inflammatory and immune responses []. It inhibits inflammatory cytokine production and synergises with IL-2 in regulating interferon-gamma synthesis. The sequences of IL-4 and IL-13 are distantly related.; PDB: 3G6D_A 3L5W_J 3BPO_A 1GA3_A 1IK0_A 3L5X_A 3L5Y_A 1IJZ_A 3LB6_B.
Probab=43.96 E-value=26 Score=20.96 Aligned_cols=19 Identities=11% Similarity=0.531 Sum_probs=0.0
Q ss_pred HHHHHhhcCcchHhhcCCCCC
Q 044705 148 TWVSSALTDASDCVAQFPVRN 168 (209)
Q Consensus 148 twLSAAlt~~~TC~Dgf~~~~ 168 (209)
-||..++. -||..|+...+
T Consensus 3 lwlt~via--ltClggLasPg 21 (43)
T PF03487_consen 3 LWLTVVIA--LTCLGGLASPG 21 (43)
T ss_dssp ---------------------
T ss_pred HHHHHHHH--HHHhcccCCCC
Confidence 37776664 58999997653
No 29
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=34.22 E-value=2.6e+02 Score=22.86 Aligned_cols=86 Identities=10% Similarity=0.157 Sum_probs=53.3
Q ss_pred hcCCCCChhchHHHhccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-hhHhHHHHHHHHHHHhHHH
Q 044705 38 SCRSTRYPTLCVHCLSGFARKTSLHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAIN-ATEYQTVEDCKQQIDSGIG 116 (209)
Q Consensus 38 ~C~~T~yp~~C~~tL~~~~~~s~~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~-~~~~~aL~dC~el~~~a~d 116 (209)
-|+ +.|+..|-. +.-+.+ ..-.+.++=++-+.+-+.++...++..++.++ +-.+.+ ...+..|.+=.|-..++.+
T Consensus 6 gCq-saYY~amEk-vG~hKR-dilvdrVe~Ardsq~eaqeQF~sALe~f~sl~-~~~ggdLe~~Y~~ln~~ye~s~~~A~ 81 (201)
T PF11172_consen 6 GCQ-SAYYSAMEK-VGVHKR-DILVDRVEDARDSQQEAQEQFKSALEQFKSLV-NFDGGDLEDKYNALNDEYESSEDAAE 81 (201)
T ss_pred HhH-HHHHHHHHH-hCCchh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 477 568888876 333222 23457778888888999999999998888883 322222 2344555555555555555
Q ss_pred HHHHHHHHHHh
Q 044705 117 QLGQSIKEIRR 127 (209)
Q Consensus 117 ~L~~a~~~l~~ 127 (209)
++.+-+.++.+
T Consensus 82 ~V~~RI~~vE~ 92 (201)
T PF11172_consen 82 EVSDRIDAVED 92 (201)
T ss_pred HHHHHHHHHHH
Confidence 55555555544
No 30
>PF10360 DUF2433: Protein of unknown function (DUF2433); InterPro: IPR018829 This entry represents a conserved domain of 120 residues from a family fungal proteins. Their function is not known.
Probab=33.61 E-value=38 Score=25.80 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=23.8
Q ss_pred hHHHHHHHHH---HHHHHHHHHHHHHHHhhhhhcCC
Q 044705 172 LKATIKGKVL---NVAQVTSNALALFHRYAARYGAG 204 (209)
Q Consensus 172 ~~~~i~~~~~---~~~~l~snaLaiv~~~~~~~~~~ 204 (209)
++..+...+. .-++|..+||.++.++|.....|
T Consensus 35 VK~~ve~~i~~~~~q~~LL~~AL~v~~kiP~~~~~~ 70 (132)
T PF10360_consen 35 VKGQVEEAIDPNEAQRNLLENALSVFDKIPISANGG 70 (132)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 4444444443 25889999999999999877664
No 31
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=28.26 E-value=2.2e+02 Score=20.24 Aligned_cols=28 Identities=7% Similarity=0.248 Sum_probs=24.3
Q ss_pred CChhHhHHHHHHHHHHHhHHHHHHHHHH
Q 044705 96 INATEYQTVEDCKQQIDSGIGQLGQSIK 123 (209)
Q Consensus 96 ~~~~~~~aL~dC~el~~~a~d~L~~a~~ 123 (209)
.++.++.|+.-|.+-|.++-.-+.++..
T Consensus 58 l~~~e~~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 58 LDSSEKSCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999888877754
No 32
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.99 E-value=3.9e+02 Score=21.63 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=36.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHhHHHHHHHHHHHhHHHHHHHHHHH
Q 044705 61 LHSPEELAQLALSISLYKARVTKAYLVKVAKQLKAINATEYQTVEDCKQQIDSGIGQLGQSIKE 124 (209)
Q Consensus 61 ~~~~~~l~~~al~~a~~~~~~a~~~~~~ll~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~~~ 124 (209)
..||.-|..+- ..+....+.+..+|...++.=.....---+|.+.|.++++.|.+++.+
T Consensus 121 ~vDp~VL~DlE-----~~~~el~~~vD~llr~lgg~lh~is~lt~~~vq~yr~aV~kl~d~~Da 179 (222)
T KOG4514|consen 121 EVDPSVLSDLE-----LEAQELASSVDNLLRNLGGLLHSISSLTADNVQVYRNAVNKLTDTLDA 179 (222)
T ss_pred CCChHHHHHHH-----HHHHHHHHHHHHHHHHhhhHHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Confidence 35777665543 333444455555543332322334445568999999999999888764
No 33
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=20.70 E-value=6.8e+02 Score=25.21 Aligned_cols=99 Identities=10% Similarity=0.094 Sum_probs=62.1
Q ss_pred ChhHhHHHHHHHHHHHhHHHHHHHHHHHHHhhccc-CCCCCCc-chhchhhHHHHHHHhhcCcchHhhcCCCCCch---h
Q 044705 97 NATEYQTVEDCKQQIDSGIGQLGQSIKEIRRLGNA-RNAVTDD-SFTRIDNVETWVSSALTDASDCVAQFPVRNMS---K 171 (209)
Q Consensus 97 ~~~~~~aL~dC~el~~~a~d~L~~a~~~l~~~~~~-~~~~~~~-~~~~~~dv~twLSAAlt~~~TC~Dgf~~~~~~---~ 171 (209)
.|.++..|+.|....-.|+++..-+.+.-...-.. +.--... +..-..|++|-|++.+.+.++=.+--...+.. +
T Consensus 620 ~p~~~rlL~a~~~q~AlAler~~L~~~~~~a~l~~e~E~lRsaLL~sISHDLRTPLt~i~Gaa~tL~~~~~~l~~~~~ae 699 (890)
T COG2205 620 APEQRRLLDAVLTQIALALERVTLAEEAEQARLAAERERLRSALLASISHDLRTPLTAIMGAAETLLLDGEALSPEDRAE 699 (890)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCcHHHHhhhHHHhhhcccccCcHhHHH
Confidence 55667788888888888887665443321110000 0000001 12356799999999999888877655544311 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHH
Q 044705 172 LKATIKGKVLNVAQVTSNALALFH 195 (209)
Q Consensus 172 ~~~~i~~~~~~~~~l~snaLaiv~ 195 (209)
+-..+......+.+|+.|-|+|..
T Consensus 700 Ll~~I~ees~~L~rlV~NLLdmTR 723 (890)
T COG2205 700 LLSSIREESERLTRLVTNLLDMTR 723 (890)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHH
Confidence 556677777899999999999954
Done!