BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044706
         (117 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
           SV=1
          Length = 127

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/58 (51%), Positives = 37/58 (63%), Gaps = 6/58 (10%)

Query: 50  LTDQADIGPDCCRAIDIITRNCWPAMFISLEFIAEEGNILRGYC------DASSAPSP 101
           L  +  +G  CC ++DIIT NCWPAM  SL F  EE N+LRG+C      D+S APSP
Sbjct: 67  LNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124


>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
           SV=1
          Length = 125

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)

Query: 50  LTDQADIGPDCCRAIDIITRNCWPAMFISLEFIAEEGNILRGYCDASSAPSPGGLAVIYQ 109
           L  +  +G  CC A+D+IT +CWPAM  SL F  EE N+LRG+C    +P+ GG +    
Sbjct: 65  LNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ---SPNSGGSSPALS 121

Query: 110 P 110
           P
Sbjct: 122 P 122


>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
           SV=1
          Length = 125

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 22/46 (47%), Positives = 34/46 (73%)

Query: 50  LTDQADIGPDCCRAIDIITRNCWPAMFISLEFIAEEGNILRGYCDA 95
           L  +  +G DCC+A+++IT +CWPAM  SL F ++E N+LRG+C +
Sbjct: 65  LNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110


>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
           SV=1
          Length = 158

 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/53 (47%), Positives = 33/53 (62%)

Query: 50  LTDQADIGPDCCRAIDIITRNCWPAMFISLEFIAEEGNILRGYCDASSAPSPG 102
           L  +  IGP CC AI  I R CWP M   L F A+EG++L+GYCD + + + G
Sbjct: 76  LNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDGNDSDNNG 128


>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
           SV=1
          Length = 155

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 7/61 (11%)

Query: 53  QADIGPDCCRAIDIITRNCWPAMFISLEFIAEEGNILRGYC-------DASSAPSPGGLA 105
           +  I  DCC AI ++ ++CW  MF SL     EGN LR YC       + S +P+P  LA
Sbjct: 83  KGGIDKDCCGAIGLVVKDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLA 142

Query: 106 V 106
           +
Sbjct: 143 L 143


>sp|Q9WVK7|HCDH_RAT Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Rattus
           norvegicus GN=Hadh PE=2 SV=1
          Length = 314

 Score = 30.8 bits (68), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 1   MALKHMFFILALTCLIMTNIANATSRNDRL 30
            A +H  F    + L +TNIANAT+R DR 
Sbjct: 137 FAAEHTIFASNTSSLQITNIANATTRQDRF 166


>sp|Q61425|HCDH_MOUSE Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial OS=Mus musculus
           GN=Hadh PE=1 SV=2
          Length = 314

 Score = 30.8 bits (68), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query: 1   MALKHMFFILALTCLIMTNIANATSRNDRL 30
            A +H  F    + L +TNIANAT+R DR 
Sbjct: 137 FAAEHTIFASNTSSLQITNIANATTRQDRF 166


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.323    0.136    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,472,228
Number of Sequences: 539616
Number of extensions: 1295923
Number of successful extensions: 2561
Number of sequences better than 100.0: 7
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2554
Number of HSP's gapped (non-prelim): 7
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)